Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 575 |
| Acc65I | GGTACC | 1 cut(s) | 77 |
| AccB1I | GGYRCC | 1 cut(s) | 77 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 814 |
| AccBSI | CCGCTC | 1 cut(s) | 1955 |
| AccIII | TCCGGA | 2 cut(s) | 154, 1396 |
| AciI | CCGC | 8 cut(s) | 581, 677, 680, 683, 975, 1384, 1955, 2438 |
| AclWI | GGATC | 8 cut(s) | 146, 467, 480, 838, 851, 1933, 2000, 2165 |
| AcoI | YGGCCR | 1 cut(s) | 357 |
| AcsI | RAATTY | 6 cut(s) | 420, 1548, 1682, 1702, 2246, 2279 |
| AdeI | CACNNNGTG | 1 cut(s) | 1239 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 765, 814, 1158 |
| AflII | CTTAAG | 1 cut(s) | 425 |
| AhlI | ACTAGT | 3 cut(s) | 1823, 1832, 2222 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2385, 2417 |
| AluBI | AGCT | 4 cut(s) | 1099, 1600, 1714, 2299 |
| AluI | AGCT | 4 cut(s) | 1099, 1600, 1714, 2299 |
| Alw21I | GWGCWC | 2 cut(s) | 1716, 2071 |
| Alw26I | GTCTC | 5 cut(s) | 43, 235, 461, 1351, 1691 |
| AlwI | GGATC | 8 cut(s) | 146, 467, 480, 838, 851, 1933, 2000, 2165 |
| Ama87I | CYCGRG | 1 cut(s) | 445 |
| Aor13HI | TCCGGA | 2 cut(s) | 154, 1396 |
| AoxI | GGCC | 6 cut(s) | 357, 804, 1302, 2109, 2545, 2554 |
| ApoI | RAATTY | 6 cut(s) | 420, 1548, 1682, 1702, 2246, 2279 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 350, 615 |
| Asp718I | GGTACC | 1 cut(s) | 77 |
| AspA2I | CCTAGG | 1 cut(s) | 1673 |
| AspLEI | GCGC | 1 cut(s) | 1055 |
| AspS9I | GGNCC | 8 cut(s) | 287, 512, 768, 805, 1391, 1804, 2110, 2545 |
| AsuC2I | CCSGG | 3 cut(s) | 446, 447, 1154 |
| AsuHPI | GGTGA | 7 cut(s) | 93, 319, 890, 1378, 1414, 1648, 2348 |
| AvaI | CYCGRG | 1 cut(s) | 445 |
| AvaII | GGWCC | 5 cut(s) | 287, 512, 768, 1391, 1804 |
| AvrII | CCTAGG | 1 cut(s) | 1673 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1005, 1038 |
| BamHI | GGATCC | 2 cut(s) | 472, 843 |
| BanI | GGYRCC | 1 cut(s) | 77 |
| BanII | GRGCYC | 3 cut(s) | 1036, 1716, 2461 |
| BbsI | GAAGAC | 2 cut(s) | 618, 1003 |
| Bbv12I | GWGCWC | 2 cut(s) | 1716, 2071 |
| BccI | CCATC | 6 cut(s) | 499, 1079, 1294, 1355, 1719, 2473 |
| BceAI | ACGGC | 2 cut(s) | 819, 2337 |
| BciVI | GTATCC | 1 cut(s) | 1226 |
| BclI | TGATCA | 1 cut(s) | 604 |
| BcnI | CCSGG | 3 cut(s) | 446, 447, 1154 |
| BcoDI | GTCTC | 5 cut(s) | 43, 235, 461, 1351, 1691 |
| BcuI | ACTAGT | 3 cut(s) | 1823, 1832, 2222 |
| BfrI | CTTAAG | 1 cut(s) | 425 |
| BfuI | GTATCC | 1 cut(s) | 1226 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2553 |
| BisI | GCNGC | 2 cut(s) | 678, 681 |
| BlnI | CCTAGG | 1 cut(s) | 1673 |
| BlsI | GCNGC | 2 cut(s) | 679, 682 |
| BmcAI | AGTACT | 3 cut(s) | 1665, 1822, 1831 |
| Bme1390I | CCNGG | 3 cut(s) | 446, 447, 1154 |
| Bme18I | GGWCC | 5 cut(s) | 287, 512, 768, 1391, 1804 |
| BmeT110I | CYCGRG | 1 cut(s) | 445 |
| BmgT120I | GGNCC | 8 cut(s) | 287, 512, 768, 805, 1391, 1804, 2110, 2545 |
| BmiI | GGNNCC | 7 cut(s) | 79, 288, 474, 845, 1392, 2265, 2546 |
| BmrFI | CCNGG | 3 cut(s) | 446, 447, 1154 |
| BmsI | GCATC | 6 cut(s) | 298, 576, 1105, 1248, 1447, 2528 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1003 |
| BpiI | GAAGAC | 2 cut(s) | 618, 1003 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 244, 276, 1301, 1333, 1331, 1363, 1417, 1449 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2097 |
| BpuEI | CTTGAG | 3 cut(s) | 90, 986, 1586 |
| BpuMI | CCSGG | 3 cut(s) | 446, 447, 1154 |
| BsaBI | GATNNNNATC | 3 cut(s) | 150, 639, 2010 |
| BsaI | GGTCTC | 2 cut(s) | 43, 1351 |
| BsaJI | CCNNGG | 4 cut(s) | 260, 445, 1152, 1673 |
| BsaWI | WCCGGW | 3 cut(s) | 154, 514, 1396 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 271, 301, 501, 531, 1471, 1501 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 765, 814, 1158 |
| Bse3DI | GCAATG | 3 cut(s) | 370, 978, 2442 |
| Bse8I | GATNNNNATC | 3 cut(s) | 150, 639, 2010 |
| BseAI | TCCGGA | 2 cut(s) | 154, 1396 |
| BseDI | CCNNGG | 4 cut(s) | 260, 445, 1152, 1673 |
| BseGI | GGATG | 9 cut(s) | 151, 510, 1062, 1090, 1148, 1212, 1730, 1932, 2107 |
| BseJI | GATNNNNATC | 3 cut(s) | 150, 639, 2010 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 765, 814, 1158 |
| BseMI | GCAATG | 3 cut(s) | 370, 978, 2442 |
| BseRI | GAGGAG | 6 cut(s) | 179, 249, 1355, 1757, 2354, 2370 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2438 |
| BshFI | GGCC | 6 cut(s) | 359, 806, 1304, 2111, 2547, 2556 |
| BshNI | GGYRCC | 1 cut(s) | 77 |
| BsiEI | CGRYCG | 1 cut(s) | 2438 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1716, 2071 |
| BsiHKCI | CYCGRG | 1 cut(s) | 445 |
| BsiSI | CCGG | 6 cut(s) | 155, 296, 446, 515, 1154, 1397 |
| BslFI | GGGAC | 3 cut(s) | 424, 1742, 2550 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 765, 814, 1158 |
| BsmAI | GTCTC | 5 cut(s) | 43, 235, 461, 1351, 1691 |
| BsmFI | GGGAC | 3 cut(s) | 424, 1742, 2550 |
| BsmI | GAATGC | 3 cut(s) | 368, 1249, 2146 |
| BsnI | GGCC | 6 cut(s) | 359, 806, 1304, 2111, 2547, 2556 |
| Bso31I | GGTCTC | 2 cut(s) | 43, 1351 |
| BsoBI | CYCGRG | 1 cut(s) | 445 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1036, 1716, 2071, 2461 |
| Bsp13I | TCCGGA | 2 cut(s) | 154, 1396 |
| BspACI | CCGC | 8 cut(s) | 581, 677, 680, 683, 975, 1384, 1955, 2438 |
| BspANI | GGCC | 6 cut(s) | 359, 806, 1304, 2111, 2547, 2556 |
| BspEI | TCCGGA | 2 cut(s) | 154, 1396 |
| BspLI | GGNNCC | 7 cut(s) | 79, 288, 474, 845, 1392, 2265, 2546 |
| BspPI | GGATC | 8 cut(s) | 146, 467, 480, 838, 851, 1933, 2000, 2165 |
| BspQI | GCTCTTC | 1 cut(s) | 1704 |
| BspT107I | GGYRCC | 1 cut(s) | 77 |
| BspTI | CTTAAG | 1 cut(s) | 425 |
| BspTNI | GGTCTC | 2 cut(s) | 43, 1351 |
| BsrBI | CCGCTC | 1 cut(s) | 1955 |
| BsrDI | GCAATG | 3 cut(s) | 370, 978, 2442 |
| BssECI | CCNNGG | 4 cut(s) | 260, 445, 1152, 1673 |
| BssT1I | CCWWGG | 1 cut(s) | 1673 |
| Bst4CI | ACNGT | 5 cut(s) | 390, 949, 1516, 2128, 2203 |
| Bst6I | CTCTTC | 6 cut(s) | 189, 198, 207, 699, 1704, 2545 |
| BstAFI | CTTAAG | 1 cut(s) | 425 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 372 |
| BstC8I | GCNNGC | 1 cut(s) | 368 |
| BstF5I | GGATG | 9 cut(s) | 151, 510, 1062, 1090, 1148, 1212, 1730, 1932, 2107 |
| BstHHI | GCGC | 1 cut(s) | 1055 |
| BstMAI | GTCTC | 5 cut(s) | 43, 235, 461, 1351, 1691 |
| BstMCI | CGRYCG | 1 cut(s) | 2438 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 372, 1565, 2553 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1003 |
| BstSCI | CCNGG | 3 cut(s) | 444, 445, 1152 |
| BstV2I | GAAGAC | 2 cut(s) | 618, 1003 |
| BstX2I | RGATCY | 3 cut(s) | 472, 843, 1938 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 74, 1387, 1987 |
| BstYI | RGATCY | 3 cut(s) | 472, 843, 1938 |
| BsuI | GTATCC | 1 cut(s) | 1226 |
| BsuRI | GGCC | 6 cut(s) | 359, 806, 1304, 2111, 2547, 2556 |
| BtsCI | GGATG | 9 cut(s) | 151, 510, 1062, 1090, 1148, 1212, 1730, 1932, 2107 |
| BtsIMutI | CAGTG | 1 cut(s) | 1521 |
| Cac8I | GCNNGC | 1 cut(s) | 368 |
| CfoI | GCGC | 1 cut(s) | 1055 |
| Cfr13I | GGNCC | 8 cut(s) | 287, 512, 768, 805, 1391, 1804, 2110, 2545 |
| Cfr9I | CCCGGG | 1 cut(s) | 445 |
| CviAII | CATG | 5 cut(s) | 355, 407, 793, 988, 1045 |
| DraI | TTTAAA | 3 cut(s) | 1282, 1336, 1554 |
| DraIII | CACNNNGTG | 1 cut(s) | 1239 |
| EaeI | YGGCCR | 1 cut(s) | 357 |
| Eam1104I | CTCTTC | 6 cut(s) | 189, 198, 207, 699, 1704, 2545 |
| EarI | CTCTTC | 6 cut(s) | 189, 198, 207, 699, 1704, 2545 |
| Ecl136II | GAGCTC | 1 cut(s) | 1714 |
| Eco130I | CCWWGG | 1 cut(s) | 1673 |
| Eco24I | GRGCYC | 3 cut(s) | 1036, 1716, 2461 |
| Eco31I | GGTCTC | 2 cut(s) | 43, 1351 |
| Eco47I | GGWCC | 5 cut(s) | 287, 512, 768, 1391, 1804 |
| Eco53kI | GAGCTC | 1 cut(s) | 1714 |
| Eco88I | CYCGRG | 1 cut(s) | 445 |
| EcoICRI | GAGCTC | 1 cut(s) | 1714 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1391 |
| EcoRI | GAATTC | 2 cut(s) | 420, 2279 |
| EcoT14I | CCWWGG | 1 cut(s) | 1673 |
| EcoT22I | ATGCAT | 1 cut(s) | 1789 |
| EcoT38I | GRGCYC | 3 cut(s) | 1036, 1716, 2461 |
| ErhI | CCWWGG | 1 cut(s) | 1673 |
| FaeI | CATG | 5 cut(s) | 358, 410, 796, 991, 1048 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1204, 1236, 1289, 1321 |
| FaqI | GGGAC | 3 cut(s) | 424, 1742, 2550 |
| FatI | CATG | 5 cut(s) | 354, 406, 792, 987, 1044 |
| FauI | CCCGC | 1 cut(s) | 1377 |
| FauNDI | CATATG | 2 cut(s) | 1252, 2026 |
| FbaI | TGATCA | 1 cut(s) | 604 |
| Fnu4HI | GCNGC | 2 cut(s) | 678, 681 |
| FokI | GGATG | 9 cut(s) | 158, 517, 1049, 1097, 1135, 1219, 1737, 1939, 2114 |
| FriOI | GRGCYC | 3 cut(s) | 1036, 1716, 2461 |
| Fsp4HI | GCNGC | 2 cut(s) | 678, 681 |
| GlaI | GCGC | 1 cut(s) | 1054 |
| GluI | GCNGC | 2 cut(s) | 678, 681 |
| HaeIII | GGCC | 6 cut(s) | 359, 806, 1304, 2111, 2547, 2556 |
| HapII | CCGG | 6 cut(s) | 155, 296, 446, 515, 1154, 1397 |
| HhaI | GCGC | 1 cut(s) | 1055 |
| Hin1II | CATG | 5 cut(s) | 358, 410, 796, 991, 1048 |
| Hin6I | GCGC | 1 cut(s) | 1053 |
| HinP1I | GCGC | 1 cut(s) | 1053 |
| HincII | GTYRAC | 1 cut(s) | 952 |
| HindII | GTYRAC | 1 cut(s) | 952 |
| HinfI | GANTC | 6 cut(s) | 253, 640, 999, 1166, 1316, 1639 |
| HpaII | CCGG | 6 cut(s) | 155, 296, 446, 515, 1154, 1397 |
| HphI | GGTGA | 7 cut(s) | 93, 319, 890, 1378, 1414, 1648, 2348 |
| Hpy166II | GTNNAC | 3 cut(s) | 29, 952, 2220 |
| Hpy188I | TCNGA | 2 cut(s) | 264, 477 |
| Hpy188III | TCNNGA | 8 cut(s) | 107, 155, 608, 620, 632, 899, 1348, 1397 |
| Hpy8I | GTNNAC | 3 cut(s) | 29, 952, 2220 |
| Hpy99I | CGWCG | 1 cut(s) | 418 |
| HpyAV | CCTTC | 6 cut(s) | 92, 703, 2123, 2448, 2496, 2535 |
| HpyCH4III | ACNGT | 5 cut(s) | 390, 949, 1516, 2128, 2203 |
| HpyCH4IV | ACGT | 2 cut(s) | 1493, 2410 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 372, 1565, 2553 |
| HpySE526I | ACGT | 2 cut(s) | 1493, 2410 |
| Hsp92II | CATG | 5 cut(s) | 358, 410, 796, 991, 1048 |
| HspAI | GCGC | 1 cut(s) | 1053 |
| Kpn2I | TCCGGA | 2 cut(s) | 154, 1396 |
| KpnI | GGTACC | 1 cut(s) | 81 |
| Ksp22I | TGATCA | 1 cut(s) | 604 |
| LguI | GCTCTTC | 1 cut(s) | 1704 |
| LmnI | GCTCC | 5 cut(s) | 1096, 1858, 2263, 2296, 2506 |
| LpnPI | CCDG | 6 cut(s) | 168, 309, 459, 528, 1167, 1410 |
| LweI | GCATC | 6 cut(s) | 298, 576, 1105, 1248, 1447, 2528 |
| MaeII | ACGT | 2 cut(s) | 1493, 2410 |
| MbiI | CCGCTC | 1 cut(s) | 1955 |
| MflI | RGATCY | 3 cut(s) | 472, 843, 1938 |
| MhlI | GDGCHC | 4 cut(s) | 1036, 1716, 2071, 2461 |
| MlyI | GAGTC | 4 cut(s) | 262, 993, 1175, 1310 |
| MmeI | TCCRAC | 5 cut(s) | 1143, 1514, 1674, 1966, 2102 |
| Mph1103I | ATGCAT | 1 cut(s) | 1789 |
| MroI | TCCGGA | 2 cut(s) | 154, 1396 |
| MroXI | GAANNNNTTC | 2 cut(s) | 350, 615 |
| MslI | CAYNNNNRTG | 1 cut(s) | 876 |
| MspCI | CTTAAG | 1 cut(s) | 425 |
| MspI | CCGG | 6 cut(s) | 155, 296, 446, 515, 1154, 1397 |
| MspR9I | CCNGG | 3 cut(s) | 446, 447, 1154 |
| Mva1269I | GAATGC | 3 cut(s) | 368, 1249, 2146 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 372, 1565, 2553 |
| NciI | CCSGG | 3 cut(s) | 446, 447, 1154 |
| NdeI | CATATG | 2 cut(s) | 1252, 2026 |
| NlaIII | CATG | 5 cut(s) | 358, 410, 796, 991, 1048 |
| NlaIV | GGNNCC | 7 cut(s) | 79, 288, 474, 845, 1392, 2265, 2546 |
| NmeAIII | GCCGAG | 1 cut(s) | 1695 |
| NmuCI | GTSAC | 7 cut(s) | 390, 1058, 1231, 1313, 1366, 1494, 1622 |
| NsiI | ATGCAT | 1 cut(s) | 1789 |
| PciSI | GCTCTTC | 1 cut(s) | 1704 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2545 |
| PctI | GAATGC | 3 cut(s) | 368, 1249, 2146 |
| PdmI | GAANNNNTTC | 2 cut(s) | 350, 615 |
| PfeI | GAWTC | 2 cut(s) | 640, 1639 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 814 |
| PkrI | GCNGC | 2 cut(s) | 679, 682 |
| PleI | GAGTC | 4 cut(s) | 261, 993, 1174, 1310 |
| PpsI | GAGTC | 4 cut(s) | 261, 993, 1174, 1310 |
| PpuMI | RGGWCCY | 1 cut(s) | 1391 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1003 |
| PsiI | TTATAA | 1 cut(s) | 575 |
| Psp124BI | GAGCTC | 1 cut(s) | 1716 |
| Psp5II | RGGWCCY | 1 cut(s) | 1391 |
| PspN4I | GGNNCC | 7 cut(s) | 79, 288, 474, 845, 1392, 2265, 2546 |
| PspPI | GGNCC | 8 cut(s) | 287, 512, 768, 805, 1391, 1804, 2110, 2545 |
| PspPPI | RGGWCCY | 1 cut(s) | 1391 |
| PsuI | RGATCY | 3 cut(s) | 472, 843, 1938 |
| RseI | CAYNNNNRTG | 1 cut(s) | 876 |
| SacI | GAGCTC | 1 cut(s) | 1716 |
| SapI | GCTCTTC | 1 cut(s) | 1704 |
| SatI | GCNGC | 2 cut(s) | 678, 681 |
| Sau96I | GGNCC | 8 cut(s) | 287, 512, 768, 805, 1391, 1804, 2110, 2545 |
| ScaI | AGTACT | 3 cut(s) | 1665, 1822, 1831 |
| SchI | GAGTC | 4 cut(s) | 262, 993, 1175, 1310 |
| ScrFI | CCNGG | 3 cut(s) | 446, 447, 1154 |
| SduI | GDGCHC | 4 cut(s) | 1036, 1716, 2071, 2461 |
| SfaNI | GCATC | 6 cut(s) | 298, 576, 1105, 1248, 1447, 2528 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 2553 |
| SinI | GGWCC | 5 cut(s) | 287, 512, 768, 1391, 1804 |
| SmaI | CCCGGG | 1 cut(s) | 447 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 876 |
| SmlI | CTYRAG | 4 cut(s) | 105, 425, 1001, 1601 |
| SmoI | CTYRAG | 4 cut(s) | 105, 425, 1001, 1601 |
| SpeI | ACTAGT | 3 cut(s) | 1823, 1832, 2222 |
| SsiI | CCGC | 8 cut(s) | 581, 677, 680, 683, 975, 1384, 1955, 2438 |
| SspI | AATATT | 3 cut(s) | 1181, 1616, 2564 |
| SstI | GAGCTC | 1 cut(s) | 1716 |
| StyD4I | CCNGG | 3 cut(s) | 444, 445, 1152 |
| StyI | CCWWGG | 1 cut(s) | 1673 |
| TaaI | ACNGT | 5 cut(s) | 390, 949, 1516, 2128, 2203 |
| TaiI | ACGT | 2 cut(s) | 1496, 2413 |
| TaqI | TCGA | 5 cut(s) | 619, 1349, 1421, 1668, 2383 |
| TatI | WGTACW | 8 cut(s) | 26, 1021, 1663, 1820, 1829, 1876, 2219, 2485 |
| TauI | GCSGC | 2 cut(s) | 680, 683 |
| TfiI | GAWTC | 2 cut(s) | 640, 1639 |
| TscAI | CASTG | 1 cut(s) | 1521 |
| TseFI | GTSAC | 7 cut(s) | 390, 1058, 1231, 1313, 1366, 1494, 1622 |
| Tsp45I | GTSAC | 7 cut(s) | 390, 1058, 1231, 1313, 1366, 1494, 1622 |
| TspDTI | ATGAA | 7 cut(s) | 147, 343, 395, 1004, 1610, 1998, 2376 |
| TspGWI | ACGGA | 1 cut(s) | 1109 |
| TspMI | CCCGGG | 1 cut(s) | 445 |
| TspRI | CASTG | 1 cut(s) | 1521 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 814 |
| Vha464I | CTTAAG | 1 cut(s) | 425 |
| VpaK11BI | GGWCC | 5 cut(s) | 287, 512, 768, 1391, 1804 |
| XapI | RAATTY | 6 cut(s) | 420, 1548, 1682, 1702, 2246, 2279 |
| XbaI | TCTAGA | 1 cut(s) | 898 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 297 |
| XmaI | CCCGGG | 1 cut(s) | 445 |
| XmaJI | CCTAGG | 1 cut(s) | 1673 |
| XmnI | GAANNNNTTC | 2 cut(s) | 350, 615 |
| ZrmI | AGTACT | 3 cut(s) | 1665, 1822, 1831 |
| Zsp2I | ATGCAT | 1 cut(s) | 1789 |