Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 185 - 266 | 1.8e-27 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 219 |
| AccIII | TCCGGA | 1 cut(s) | 169 |
| AciI | CCGC | 3 cut(s) | 204, 705, 803 |
| AcsI | RAATTY | 5 cut(s) | 146, 282, 365, 406, 524 |
| AcuI | CTGAAG | 2 cut(s) | 495, 870 |
| AcvI | CACGTG | 1 cut(s) | 788 |
| AcyI | GRCGYC | 1 cut(s) | 879 |
| AfaI | GTAC | 3 cut(s) | 238, 563, 669 |
| AflIII | ACRYGT | 1 cut(s) | 785 |
| AgsI | TTSAA | 3 cut(s) | 132, 152, 601 |
| AhlI | ACTAGT | 1 cut(s) | 440 |
| AjnI | CCWGG | 1 cut(s) | 639 |
| AluBI | AGCT | 2 cut(s) | 773, 927 |
| AluI | AGCT | 2 cut(s) | 773, 927 |
| Alw21I | GWGCWC | 2 cut(s) | 224, 751 |
| Alw26I | GTCTC | 1 cut(s) | 41 |
| Alw44I | GTGCAC | 1 cut(s) | 747 |
| Aor13HI | TCCGGA | 1 cut(s) | 169 |
| ApaLI | GTGCAC | 1 cut(s) | 747 |
| ApeKI | GCWGC | 1 cut(s) | 914 |
| ApoI | RAATTY | 5 cut(s) | 146, 282, 365, 406, 524 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 125, 157 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 156 |
| AspA2I | CCTAGG | 1 cut(s) | 292 |
| AspS9I | GGNCC | 1 cut(s) | 167 |
| AvaII | GGWCC | 1 cut(s) | 167 |
| AvrII | CCTAGG | 1 cut(s) | 292 |
| BaeGI | GKGCMC | 1 cut(s) | 751 |
| BauI | CACGAG | 1 cut(s) | 660 |
| BbrPI | CACGTG | 1 cut(s) | 788 |
| Bbv12I | GWGCWC | 2 cut(s) | 224, 751 |
| BbvI | GCAGC | 1 cut(s) | 901 |
| BccI | CCATC | 2 cut(s) | 317, 455 |
| BciT130I | CCWGG | 1 cut(s) | 641 |
| BclI | TGATCA | 2 cut(s) | 333, 355 |
| BcoDI | GTCTC | 1 cut(s) | 41 |
| BcuI | ACTAGT | 1 cut(s) | 440 |
| BfaI | CTAG | 5 cut(s) | 225, 287, 293, 348, 441 |
| BfmI | CTRYAG | 2 cut(s) | 687, 765 |
| BfuAI | ACCTGC | 1 cut(s) | 219 |
| BisI | GCNGC | 1 cut(s) | 915 |
| BlnI | CCTAGG | 1 cut(s) | 292 |
| BlsI | GCNGC | 1 cut(s) | 916 |
| Bme1390I | CCNGG | 1 cut(s) | 641 |
| Bme18I | GGWCC | 1 cut(s) | 167 |
| BmgT120I | GGNCC | 1 cut(s) | 167 |
| BmiI | GGNNCC | 1 cut(s) | 168 |
| BmrFI | CCNGG | 1 cut(s) | 641 |
| BmsI | GCATC | 3 cut(s) | 101, 191, 272 |
| BpuEI | CTTGAG | 1 cut(s) | 6 |
| BsaAI | YACGTR | 1 cut(s) | 788 |
| BsaHI | GRCGYC | 1 cut(s) | 879 |
| BsaI | GGTCTC | 1 cut(s) | 41 |
| BsaJI | CCNNGG | 2 cut(s) | 292, 575 |
| BsaWI | WCCGGW | 1 cut(s) | 169 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 430, 460 |
| BseAI | TCCGGA | 1 cut(s) | 169 |
| BseBI | CCWGG | 1 cut(s) | 641 |
| BseDI | CCNNGG | 2 cut(s) | 292, 575 |
| BseGI | GGATG | 2 cut(s) | 10, 844 |
| BseMII | CTCAG | 1 cut(s) | 563 |
| BseRI | GAGGAG | 1 cut(s) | 438 |
| BseSI | GKGCMC | 1 cut(s) | 751 |
| BseXI | GCAGC | 1 cut(s) | 901 |
| BsiHKAI | GWGCWC | 2 cut(s) | 224, 751 |
| BsiSI | CCGG | 1 cut(s) | 170 |
| BsmAI | GTCTC | 1 cut(s) | 41 |
| Bso31I | GGTCTC | 1 cut(s) | 41 |
| Bsp1286I | GDGCHC | 2 cut(s) | 224, 751 |
| Bsp13I | TCCGGA | 1 cut(s) | 169 |
| Bsp143I | GATC | 2 cut(s) | 333, 355 |
| BspACI | CCGC | 3 cut(s) | 204, 705, 803 |
| BspCNI | CTCAG | 1 cut(s) | 562 |
| BspEI | TCCGGA | 1 cut(s) | 169 |
| BspHI | TCATGA | 2 cut(s) | 10, 358 |
| BspLI | GGNNCC | 1 cut(s) | 168 |
| BspMI | ACCTGC | 1 cut(s) | 219 |
| BspTNI | GGTCTC | 1 cut(s) | 41 |
| BssECI | CCNNGG | 2 cut(s) | 292, 575 |
| BssMI | GATC | 2 cut(s) | 333, 355 |
| BssNI | GRCGYC | 1 cut(s) | 879 |
| BssSI | CACGAG | 1 cut(s) | 660 |
| BssT1I | CCWWGG | 2 cut(s) | 292, 575 |
| Bst2BI | CACGAG | 1 cut(s) | 660 |
| Bst2UI | CCWGG | 1 cut(s) | 641 |
| Bst4CI | ACNGT | 2 cut(s) | 766, 910 |
| BstACI | GRCGYC | 1 cut(s) | 879 |
| BstBAI | YACGTR | 1 cut(s) | 788 |
| BstDEI | CTNAG | 5 cut(s) | 189, 197, 549, 565, 584 |
| BstF5I | GGATG | 2 cut(s) | 10, 844 |
| BstKTI | GATC | 2 cut(s) | 336, 358 |
| BstMAI | GTCTC | 1 cut(s) | 41 |
| BstMBI | GATC | 2 cut(s) | 333, 355 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 201 |
| BstNI | CCWGG | 1 cut(s) | 641 |
| BstSCI | CCNGG | 1 cut(s) | 639 |
| BstSFI | CTRYAG | 2 cut(s) | 687, 765 |
| BstSLI | GKGCMC | 1 cut(s) | 751 |
| BstV1I | GCAGC | 1 cut(s) | 901 |
| BtsCI | GGATG | 2 cut(s) | 10, 844 |
| BtsIMutI | CAGTG | 1 cut(s) | 906 |
| BveI | ACCTGC | 1 cut(s) | 219 |
| CciI | TCATGA | 2 cut(s) | 10, 358 |
| Cfr13I | GGNCC | 1 cut(s) | 167 |
| CseI | GACGC | 2 cut(s) | 35, 887 |
| Csp6I | GTAC | 3 cut(s) | 237, 562, 668 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 816, 851 |
| CviAII | CATG | 3 cut(s) | 11, 359, 655 |
| CviJI | RGCY | 5 cut(s) | 188, 327, 659, 773, 927 |
| CviKI_1 | RGCY | 5 cut(s) | 188, 327, 659, 773, 927 |
| CviQI | GTAC | 3 cut(s) | 237, 562, 668 |
| DdeI | CTNAG | 5 cut(s) | 189, 197, 549, 565, 584 |
| DpnI | GATC | 2 cut(s) | 335, 357 |
| DpnII | GATC | 2 cut(s) | 333, 355 |
| Eco130I | CCWWGG | 2 cut(s) | 292, 575 |
| Eco31I | GGTCTC | 1 cut(s) | 41 |
| Eco47I | GGWCC | 1 cut(s) | 167 |
| Eco57I | CTGAAG | 2 cut(s) | 495, 870 |
| Eco72I | CACGTG | 1 cut(s) | 788 |
| EcoRI | GAATTC | 1 cut(s) | 406 |
| EcoRII | CCWGG | 1 cut(s) | 639 |
| EcoT14I | CCWWGG | 2 cut(s) | 292, 575 |
| ErhI | CCWWGG | 2 cut(s) | 292, 575 |
| FaeI | CATG | 3 cut(s) | 14, 362, 658 |
| FatI | CATG | 3 cut(s) | 10, 358, 654 |
| FbaI | TGATCA | 2 cut(s) | 333, 355 |
| Fnu4HI | GCNGC | 1 cut(s) | 915 |
| FokI | GGATG | 2 cut(s) | 17, 851 |
| Fsp4HI | GCNGC | 1 cut(s) | 915 |
| FspBI | CTAG | 5 cut(s) | 225, 287, 293, 348, 441 |
| GluI | GCNGC | 1 cut(s) | 915 |
| HapII | CCGG | 1 cut(s) | 170 |
| HgaI | GACGC | 2 cut(s) | 35, 887 |
| Hin1I | GRCGYC | 1 cut(s) | 879 |
| Hin1II | CATG | 3 cut(s) | 14, 362, 658 |
| HinfI | GANTC | 3 cut(s) | 244, 547, 701 |
| HpaII | CCGG | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 2 cut(s) | 374, 749 |
| Hpy188I | TCNGA | 6 cut(s) | 249, 333, 475, 681, 700, 760 |
| Hpy8I | GTNNAC | 2 cut(s) | 374, 749 |
| HpyAV | CCTTC | 3 cut(s) | 490, 613, 617 |
| HpyCH4III | ACNGT | 2 cut(s) | 766, 910 |
| HpyCH4IV | ACGT | 2 cut(s) | 253, 787 |
| HpyCH4V | TGCA | 4 cut(s) | 67, 92, 556, 749 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 201 |
| HpyF3I | CTNAG | 5 cut(s) | 189, 197, 549, 565, 584 |
| HpySE526I | ACGT | 2 cut(s) | 253, 787 |
| Hsp92I | GRCGYC | 1 cut(s) | 879 |
| Hsp92II | CATG | 3 cut(s) | 14, 362, 658 |
| Kpn2I | TCCGGA | 1 cut(s) | 169 |
| Ksp22I | TGATCA | 2 cut(s) | 333, 355 |
| Kzo9I | GATC | 2 cut(s) | 333, 355 |
| LpnPI | CCDG | 5 cut(s) | 183, 214, 225, 626, 653 |
| Lsp1109I | GCAGC | 1 cut(s) | 901 |
| LweI | GCATC | 3 cut(s) | 101, 191, 272 |
| MaeI | CTAG | 5 cut(s) | 225, 287, 293, 348, 441 |
| MaeII | ACGT | 2 cut(s) | 253, 787 |
| MaeIII | GTNAC | 4 cut(s) | 208, 579, 817, 875 |
| MalI | GATC | 2 cut(s) | 335, 357 |
| MboI | GATC | 2 cut(s) | 333, 355 |
| MboII | GAAGA | 6 cut(s) | 129, 149, 488, 533, 818, 863 |
| MfeI | CAATTG | 1 cut(s) | 557 |
| MhlI | GDGCHC | 2 cut(s) | 224, 751 |
| MlyI | GAGTC | 2 cut(s) | 541, 710 |
| MnlI | CCTC | 4 cut(s) | 105, 424, 456, 459 |
| MroI | TCCGGA | 1 cut(s) | 169 |
| MroXI | GAANNNNTTC | 1 cut(s) | 156 |
| MseI | TTAA | 2 cut(s) | 753, 866 |
| MslI | CAYNNNNRTG | 1 cut(s) | 318 |
| MspI | CCGG | 1 cut(s) | 170 |
| MspR9I | CCNGG | 1 cut(s) | 641 |
| MunI | CAATTG | 1 cut(s) | 557 |
| MvaI | CCWGG | 1 cut(s) | 641 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 201 |
| NdeII | GATC | 2 cut(s) | 333, 355 |
| NlaIII | CATG | 3 cut(s) | 14, 362, 658 |
| NlaIV | GGNNCC | 1 cut(s) | 168 |
| NmeAIII | GCCGAG | 1 cut(s) | 70 |
| NmuCI | GTSAC | 1 cut(s) | 875 |
| PagI | TCATGA | 2 cut(s) | 10, 358 |
| PdmI | GAANNNNTTC | 1 cut(s) | 156 |
| PfeI | GAWTC | 1 cut(s) | 244 |
| PkrI | GCNGC | 1 cut(s) | 916 |
| PleI | GAGTC | 2 cut(s) | 541, 709 |
| PmaCI | CACGTG | 1 cut(s) | 788 |
| PmlI | CACGTG | 1 cut(s) | 788 |
| PpsI | GAGTC | 2 cut(s) | 541, 709 |
| Ppu21I | YACGTR | 1 cut(s) | 788 |
| Psp6I | CCWGG | 1 cut(s) | 639 |
| PspCI | CACGTG | 1 cut(s) | 788 |
| PspGI | CCWGG | 1 cut(s) | 639 |
| PspN4I | GGNNCC | 1 cut(s) | 168 |
| PspPI | GGNCC | 1 cut(s) | 167 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 564, 596 |
| RsaI | GTAC | 3 cut(s) | 238, 563, 669 |
| RsaNI | GTAC | 3 cut(s) | 237, 562, 668 |
| RseI | CAYNNNNRTG | 1 cut(s) | 318 |
| SaqAI | TTAA | 2 cut(s) | 753, 866 |
| SatI | GCNGC | 1 cut(s) | 915 |
| Sau3AI | GATC | 2 cut(s) | 333, 355 |
| Sau96I | GGNCC | 1 cut(s) | 167 |
| SchI | GAGTC | 2 cut(s) | 541, 710 |
| ScrFI | CCNGG | 1 cut(s) | 641 |
| SduI | GDGCHC | 2 cut(s) | 224, 751 |
| SfaNI | GCATC | 3 cut(s) | 101, 191, 272 |
| SfcI | CTRYAG | 2 cut(s) | 687, 765 |
| SinI | GGWCC | 1 cut(s) | 167 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 318 |
| SmlI | CTYRAG | 1 cut(s) | 21 |
| SmoI | CTYRAG | 1 cut(s) | 21 |
| SpeI | ACTAGT | 1 cut(s) | 440 |
| SsiI | CCGC | 3 cut(s) | 204, 705, 803 |
| SspMI | CTAG | 5 cut(s) | 225, 287, 293, 348, 441 |
| StyD4I | CCNGG | 1 cut(s) | 639 |
| StyI | CCWWGG | 2 cut(s) | 292, 575 |
| TaaI | ACNGT | 2 cut(s) | 766, 910 |
| TaiI | ACGT | 2 cut(s) | 256, 790 |
| TaqI | TCGA | 1 cut(s) | 923 |
| TatI | WGTACW | 2 cut(s) | 561, 667 |
| TfiI | GAWTC | 1 cut(s) | 244 |
| Tru1I | TTAA | 2 cut(s) | 753, 866 |
| Tru9I | TTAA | 2 cut(s) | 753, 866 |
| TscAI | CASTG | 1 cut(s) | 913 |
| TseFI | GTSAC | 1 cut(s) | 875 |
| TseI | GCWGC | 1 cut(s) | 914 |
| Tsp45I | GTSAC | 1 cut(s) | 875 |
| TspDTI | ATGAA | 5 cut(s) | 380, 398, 419, 509, 585 |
| TspRI | CASTG | 1 cut(s) | 913 |
| VneI | GTGCAC | 1 cut(s) | 747 |
| VpaK11BI | GGWCC | 1 cut(s) | 167 |
| XapI | RAATTY | 5 cut(s) | 146, 282, 365, 406, 524 |
| XbaI | TCTAGA | 1 cut(s) | 286 |
| XmaJI | CCTAGG | 1 cut(s) | 292 |
| XmnI | GAANNNNTTC | 1 cut(s) | 156 |
| XspI | CTAG | 5 cut(s) | 225, 287, 293, 348, 441 |