Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 119, 1563 |
| AccIII | TCCGGA | 1 cut(s) | 1861 |
| AciI | CCGC | 2 cut(s) | 1461, 1997 |
| AclWI | GGATC | 6 cut(s) | 1259, 1272, 1380, 1574, 1660, 1751 |
| AcsI | RAATTY | 4 cut(s) | 4, 713, 946, 1619 |
| AcuI | CTGAAG | 4 cut(s) | 1334, 1458, 1717, 1968 |
| AfaI | GTAC | 4 cut(s) | 295, 774, 860, 1711 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1369, 1669 |
| AflIII | ACRYGT | 1 cut(s) | 1500 |
| AjnI | CCWGG | 1 cut(s) | 1151 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 532, 564 |
| Alw21I | GWGCWC | 2 cut(s) | 186, 244 |
| AlwI | GGATC | 6 cut(s) | 1259, 1272, 1380, 1574, 1660, 1751 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 980 |
| Aor13HI | TCCGGA | 1 cut(s) | 1861 |
| AoxI | GGCC | 1 cut(s) | 965 |
| ApaI | GGGCCC | 1 cut(s) | 969 |
| ApeKI | GCWGC | 8 cut(s) | 145, 272, 449, 1458, 1673, 1952, 1955, 1994 |
| ApoI | RAATTY | 4 cut(s) | 4, 713, 946, 1619 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1620 |
| AspS9I | GGNCC | 2 cut(s) | 965, 966 |
| AsuC2I | CCSGG | 2 cut(s) | 342, 1064 |
| AsuHPI | GGTGA | 4 cut(s) | 926, 1062, 1345, 1561 |
| AsuII | TTCGAA | 1 cut(s) | 131 |
| AxyI | CCTNAGG | 1 cut(s) | 900 |
| BaeGI | GKGCMC | 1 cut(s) | 969 |
| BamHI | GGATCC | 1 cut(s) | 1264 |
| BanII | GRGCYC | 1 cut(s) | 969 |
| BbsI | GAAGAC | 4 cut(s) | 116, 120, 1917, 1959 |
| Bbv12I | GWGCWC | 2 cut(s) | 186, 244 |
| BbvCI | CCTCAGC | 1 cut(s) | 849 |
| BbvI | GCAGC | 8 cut(s) | 132, 259, 436, 1470, 1685, 1939, 1942, 1981 |
| BccI | CCATC | 4 cut(s) | 200, 273, 380, 463 |
| BciT130I | CCWGG | 1 cut(s) | 1153 |
| BclI | TGATCA | 2 cut(s) | 543, 1348 |
| BcnI | CCSGG | 2 cut(s) | 342, 1064 |
| BfaI | CTAG | 4 cut(s) | 297, 402, 702, 1719 |
| BfmI | CTRYAG | 2 cut(s) | 120, 1677 |
| BglII | AGATCT | 1 cut(s) | 1343 |
| BisI | GCNGC | 8 cut(s) | 146, 273, 450, 1459, 1674, 1953, 1956, 1995 |
| BlsI | GCNGC | 8 cut(s) | 147, 274, 451, 1460, 1675, 1954, 1957, 1996 |
| BmcAI | AGTACT | 2 cut(s) | 860, 1711 |
| Bme1390I | CCNGG | 3 cut(s) | 342, 1064, 1153 |
| BmgT120I | GGNCC | 2 cut(s) | 965, 966 |
| BmiI | GGNNCC | 4 cut(s) | 897, 967, 968, 1266 |
| BmrFI | CCNGG | 3 cut(s) | 342, 1064, 1153 |
| BmsI | GCATC | 4 cut(s) | 153, 424, 1107, 1842 |
| BpiI | GAAGAC | 4 cut(s) | 116, 120, 1917, 1959 |
| BpmI | CTGGAG | 1 cut(s) | 1349 |
| Bpu10I | CCTNAGC | 1 cut(s) | 849 |
| Bpu14I | TTCGAA | 1 cut(s) | 131 |
| BpuEI | CTTGAG | 1 cut(s) | 1060 |
| BpuMI | CCSGG | 2 cut(s) | 342, 1064 |
| Bsa29I | ATCGAT | 1 cut(s) | 1755 |
| BsaJI | CCNNGG | 3 cut(s) | 341, 1152, 1268 |
| BsaWI | WCCGGW | 1 cut(s) | 1861 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1369, 1669 |
| Bse1I | ACTGG | 2 cut(s) | 648, 2065 |
| Bse21I | CCTNAGG | 1 cut(s) | 900 |
| Bse3DI | GCAATG | 1 cut(s) | 2083 |
| BseAI | TCCGGA | 1 cut(s) | 1861 |
| BseBI | CCWGG | 1 cut(s) | 1153 |
| BseCI | ATCGAT | 1 cut(s) | 1755 |
| BseDI | CCNNGG | 3 cut(s) | 341, 1152, 1268 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1369, 1669 |
| BseMI | GCAATG | 1 cut(s) | 2083 |
| BseMII | CTCAG | 2 cut(s) | 840, 891 |
| BseNI | ACTGG | 2 cut(s) | 648, 2065 |
| BseRI | GAGGAG | 3 cut(s) | 230, 905, 1354 |
| BseSI | GKGCMC | 1 cut(s) | 969 |
| BseXI | GCAGC | 8 cut(s) | 132, 259, 436, 1470, 1685, 1939, 1942, 1981 |
| BseYI | CCCAGC | 1 cut(s) | 2084 |
| BsgI | GTGCAG | 1 cut(s) | 426 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1465 |
| BshFI | GGCC | 1 cut(s) | 967 |
| BshVI | ATCGAT | 1 cut(s) | 1755 |
| BsiEI | CGRYCG | 1 cut(s) | 1465 |
| BsiHKAI | GWGCWC | 2 cut(s) | 186, 244 |
| BsiSI | CCGG | 3 cut(s) | 341, 1064, 1862 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1369, 1669 |
| BsmI | GAATGC | 1 cut(s) | 676 |
| BsnI | GGCC | 1 cut(s) | 967 |
| Bsp119I | TTCGAA | 1 cut(s) | 131 |
| Bsp120I | GGGCCC | 1 cut(s) | 965 |
| Bsp1286I | GDGCHC | 3 cut(s) | 186, 244, 969 |
| Bsp13I | TCCGGA | 1 cut(s) | 1861 |
| Bsp143I | GATC | 8 cut(s) | 543, 1264, 1343, 1348, 1372, 1579, 1652, 1756 |
| BspACI | CCGC | 2 cut(s) | 1461, 1997 |
| BspANI | GGCC | 1 cut(s) | 967 |
| BspCNI | CTCAG | 2 cut(s) | 841, 892 |
| BspDI | ATCGAT | 1 cut(s) | 1755 |
| BspEI | TCCGGA | 1 cut(s) | 1861 |
| BspHI | TCATGA | 1 cut(s) | 1084 |
| BspLI | GGNNCC | 4 cut(s) | 897, 967, 968, 1266 |
| BspPI | GGATC | 6 cut(s) | 1259, 1272, 1380, 1574, 1660, 1751 |
| BspQI | GCTCTTC | 2 cut(s) | 36, 174 |
| BspT104I | TTCGAA | 1 cut(s) | 131 |
| BsrDI | GCAATG | 1 cut(s) | 2083 |
| BsrI | ACTGG | 2 cut(s) | 648, 2065 |
| BssECI | CCNNGG | 3 cut(s) | 341, 1152, 1268 |
| BssMI | GATC | 8 cut(s) | 543, 1264, 1343, 1348, 1372, 1579, 1652, 1756 |
| BssT1I | CCWWGG | 1 cut(s) | 1268 |
| Bst2UI | CCWGG | 1 cut(s) | 1153 |
| Bst4CI | ACNGT | 3 cut(s) | 60, 457, 1714 |
| Bst6I | CTCTTC | 4 cut(s) | 36, 174, 882, 950 |
| BstBI | TTCGAA | 1 cut(s) | 131 |
| BstC8I | GCNNGC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 6 cut(s) | 174, 824, 849, 900, 951, 1197 |
| BstKTI | GATC | 8 cut(s) | 546, 1267, 1346, 1351, 1375, 1582, 1655, 1759 |
| BstMBI | GATC | 8 cut(s) | 543, 1264, 1343, 1348, 1372, 1579, 1652, 1756 |
| BstMCI | CGRYCG | 1 cut(s) | 1465 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 142, 1679, 1949 |
| BstNI | CCWGG | 1 cut(s) | 1153 |
| BstNSI | RCATGY | 4 cut(s) | 441, 590, 726, 1504 |
| BstSCI | CCNGG | 3 cut(s) | 340, 1062, 1151 |
| BstSFI | CTRYAG | 2 cut(s) | 120, 1677 |
| BstSLI | GKGCMC | 1 cut(s) | 969 |
| BstV1I | GCAGC | 8 cut(s) | 132, 259, 436, 1470, 1685, 1939, 1942, 1981 |
| BstV2I | GAAGAC | 4 cut(s) | 116, 120, 1917, 1959 |
| BstX2I | RGATCY | 5 cut(s) | 1264, 1343, 1372, 1579, 1652 |
| BstYI | RGATCY | 5 cut(s) | 1264, 1343, 1372, 1579, 1652 |
| Bsu15I | ATCGAT | 1 cut(s) | 1755 |
| Bsu36I | CCTNAGG | 1 cut(s) | 900 |
| BsuRI | GGCC | 1 cut(s) | 967 |
| BsuTUI | ATCGAT | 1 cut(s) | 1755 |
| BtsI | GCAGTG | 2 cut(s) | 681, 810 |
| BtsIMutI | CAGTG | 2 cut(s) | 681, 810 |
| Cac8I | GCNNGC | 1 cut(s) | 48 |
| CaiI | CAGNNNCTG | 1 cut(s) | 980 |
| CciI | TCATGA | 1 cut(s) | 1084 |
| Cfr13I | GGNCC | 2 cut(s) | 965, 966 |
| ClaI | ATCGAT | 1 cut(s) | 1755 |
| CseI | GACGC | 1 cut(s) | 114 |
| Csp6I | GTAC | 4 cut(s) | 294, 773, 859, 1710 |
| CviAII | CATG | 8 cut(s) | 153, 438, 587, 723, 1085, 1501, 2069, 2104 |
| CviQI | GTAC | 4 cut(s) | 294, 773, 859, 1710 |
| DdeI | CTNAG | 6 cut(s) | 174, 824, 849, 900, 951, 1197 |
| DpnI | GATC | 8 cut(s) | 545, 1266, 1345, 1350, 1374, 1581, 1654, 1758 |
| DpnII | GATC | 8 cut(s) | 543, 1264, 1343, 1348, 1372, 1579, 1652, 1756 |
| Eam1104I | CTCTTC | 4 cut(s) | 36, 174, 882, 950 |
| EarI | CTCTTC | 4 cut(s) | 36, 174, 882, 950 |
| Eco130I | CCWWGG | 1 cut(s) | 1268 |
| Eco24I | GRGCYC | 1 cut(s) | 969 |
| Eco32I | GATATC | 1 cut(s) | 1571 |
| Eco57I | CTGAAG | 4 cut(s) | 1334, 1458, 1717, 1968 |
| Eco81I | CCTNAGG | 1 cut(s) | 900 |
| EcoO109I | RGGNCCY | 2 cut(s) | 965, 966 |
| EcoRI | GAATTC | 2 cut(s) | 4, 946 |
| EcoRII | CCWGG | 1 cut(s) | 1151 |
| EcoRV | GATATC | 1 cut(s) | 1571 |
| EcoT14I | CCWWGG | 1 cut(s) | 1268 |
| EcoT22I | ATGCAT | 2 cut(s) | 168, 439 |
| EcoT38I | GRGCYC | 1 cut(s) | 969 |
| ErhI | CCWWGG | 1 cut(s) | 1268 |
| FaeI | CATG | 8 cut(s) | 156, 441, 590, 726, 1088, 1504, 2072, 2107 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1677, 1709 |
| FatI | CATG | 8 cut(s) | 152, 437, 586, 722, 1084, 1500, 2068, 2103 |
| FbaI | TGATCA | 2 cut(s) | 543, 1348 |
| FblI | GTMKAC | 2 cut(s) | 119, 1563 |
| Fnu4HI | GCNGC | 8 cut(s) | 146, 273, 450, 1459, 1674, 1953, 1956, 1995 |
| FriOI | GRGCYC | 1 cut(s) | 969 |
| Fsp4HI | GCNGC | 8 cut(s) | 146, 273, 450, 1459, 1674, 1953, 1956, 1995 |
| FspBI | CTAG | 4 cut(s) | 297, 402, 702, 1719 |
| GluI | GCNGC | 8 cut(s) | 146, 273, 450, 1459, 1674, 1953, 1956, 1995 |
| GsaI | CCCAGC | 1 cut(s) | 2088 |
| GsuI | CTGGAG | 1 cut(s) | 1349 |
| HaeIII | GGCC | 1 cut(s) | 967 |
| HapII | CCGG | 3 cut(s) | 341, 1064, 1862 |
| HgaI | GACGC | 1 cut(s) | 114 |
| Hin1II | CATG | 8 cut(s) | 156, 441, 590, 726, 1088, 1504, 2072, 2107 |
| HincII | GTYRAC | 3 cut(s) | 613, 745, 1564 |
| HindII | GTYRAC | 3 cut(s) | 613, 745, 1564 |
| HindIII | AAGCTT | 4 cut(s) | 821, 1219, 1729, 1941 |
| HinfI | GANTC | 8 cut(s) | 29, 370, 398, 633, 1469, 1538, 1699, 1724 |
| HpaI | GTTAAC | 1 cut(s) | 613 |
| HpaII | CCGG | 3 cut(s) | 341, 1064, 1862 |
| HphI | GGTGA | 4 cut(s) | 926, 1062, 1345, 1561 |
| Hpy166II | GTNNAC | 4 cut(s) | 120, 613, 745, 1564 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 34, 572, 1144, 1348, 1782, 1948 |
| Hpy8I | GTNNAC | 4 cut(s) | 120, 613, 745, 1564 |
| HpyAV | CCTTC | 4 cut(s) | 64, 550, 905, 1817 |
| HpyCH4III | ACNGT | 3 cut(s) | 60, 457, 1714 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 142, 1679, 1949 |
| HpyF3I | CTNAG | 6 cut(s) | 174, 824, 849, 900, 951, 1197 |
| Hsp92II | CATG | 8 cut(s) | 156, 441, 590, 726, 1088, 1504, 2072, 2107 |
| Kpn2I | TCCGGA | 1 cut(s) | 1861 |
| Ksp22I | TGATCA | 2 cut(s) | 543, 1348 |
| KspAI | GTTAAC | 1 cut(s) | 613 |
| Kzo9I | GATC | 8 cut(s) | 543, 1264, 1343, 1348, 1372, 1579, 1652, 1756 |
| LguI | GCTCTTC | 2 cut(s) | 36, 174 |
| LmnI | GCTCC | 1 cut(s) | 1516 |
| Lsp1109I | GCAGC | 8 cut(s) | 132, 259, 436, 1470, 1685, 1939, 1942, 1981 |
| LweI | GCATC | 4 cut(s) | 153, 424, 1107, 1842 |
| MaeI | CTAG | 4 cut(s) | 297, 402, 702, 1719 |
| MaeIII | GTNAC | 2 cut(s) | 1466, 1826 |
| MalI | GATC | 8 cut(s) | 545, 1266, 1345, 1350, 1374, 1581, 1654, 1758 |
| MboI | GATC | 8 cut(s) | 543, 1264, 1343, 1348, 1372, 1579, 1652, 1756 |
| MfeI | CAATTG | 2 cut(s) | 547, 1133 |
| MflI | RGATCY | 5 cut(s) | 1264, 1343, 1372, 1579, 1652 |
| MhlI | GDGCHC | 3 cut(s) | 186, 244, 969 |
| MlyI | GAGTC | 5 cut(s) | 364, 627, 1463, 1547, 1733 |
| MmeI | TCCRAC | 3 cut(s) | 205, 786, 1242 |
| Mph1103I | ATGCAT | 2 cut(s) | 168, 439 |
| MroI | TCCGGA | 1 cut(s) | 1861 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1620 |
| MseI | TTAA | 9 cut(s) | 531, 612, 717, 818, 882, 1233, 1280, 1356, 1775 |
| MslI | CAYNNNNRTG | 2 cut(s) | 157, 620 |
| MspA1I | CMGCKG | 3 cut(s) | 1461, 1676, 1994 |
| MspI | CCGG | 3 cut(s) | 341, 1064, 1862 |
| MspR9I | CCNGG | 3 cut(s) | 342, 1064, 1153 |
| MunI | CAATTG | 2 cut(s) | 547, 1133 |
| Mva1269I | GAATGC | 1 cut(s) | 676 |
| MvaI | CCWGG | 1 cut(s) | 1153 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 142, 1679, 1949 |
| NciI | CCSGG | 2 cut(s) | 342, 1064 |
| NdeII | GATC | 8 cut(s) | 543, 1264, 1343, 1348, 1372, 1579, 1652, 1756 |
| NlaIII | CATG | 8 cut(s) | 156, 441, 590, 726, 1088, 1504, 2072, 2107 |
| NlaIV | GGNNCC | 4 cut(s) | 897, 967, 968, 1266 |
| NmuCI | GTSAC | 2 cut(s) | 1466, 1826 |
| NsiI | ATGCAT | 2 cut(s) | 168, 439 |
| NspI | RCATGY | 4 cut(s) | 441, 590, 726, 1504 |
| NspV | TTCGAA | 1 cut(s) | 131 |
| PagI | TCATGA | 1 cut(s) | 1084 |
| PciI | ACATGT | 1 cut(s) | 1500 |
| PciSI | GCTCTTC | 2 cut(s) | 36, 174 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 137 |
| PctI | GAATGC | 1 cut(s) | 676 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1620 |
| PfeI | GAWTC | 3 cut(s) | 29, 398, 1699 |
| PflFI | GACNNNGTC | 1 cut(s) | 115 |
| PkrI | GCNGC | 8 cut(s) | 147, 274, 451, 1460, 1675, 1954, 1957, 1996 |
| PleI | GAGTC | 5 cut(s) | 364, 627, 1463, 1546, 1732 |
| PpsI | GAGTC | 5 cut(s) | 364, 627, 1463, 1546, 1732 |
| PscI | ACATGT | 1 cut(s) | 1500 |
| Psp6I | CCWGG | 1 cut(s) | 1151 |
| PspFI | CCCAGC | 1 cut(s) | 2084 |
| PspGI | CCWGG | 1 cut(s) | 1151 |
| PspN4I | GGNNCC | 4 cut(s) | 897, 967, 968, 1266 |
| PspOMI | GGGCCC | 1 cut(s) | 965 |
| PspPI | GGNCC | 2 cut(s) | 965, 966 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 779, 811 |
| PstNI | CAGNNNCTG | 1 cut(s) | 980 |
| PsuI | RGATCY | 5 cut(s) | 1264, 1343, 1372, 1579, 1652 |
| PsyI | GACNNNGTC | 1 cut(s) | 115 |
| PvuII | CAGCTG | 2 cut(s) | 1676, 1994 |
| RsaI | GTAC | 4 cut(s) | 295, 774, 860, 1711 |
| RsaNI | GTAC | 4 cut(s) | 294, 773, 859, 1710 |
| RseI | CAYNNNNRTG | 2 cut(s) | 157, 620 |
| SalI | GTCGAC | 1 cut(s) | 1562 |
| SapI | GCTCTTC | 2 cut(s) | 36, 174 |
| SaqAI | TTAA | 9 cut(s) | 531, 612, 717, 818, 882, 1233, 1280, 1356, 1775 |
| SatI | GCNGC | 8 cut(s) | 146, 273, 450, 1459, 1674, 1953, 1956, 1995 |
| Sau3AI | GATC | 8 cut(s) | 543, 1264, 1343, 1348, 1372, 1579, 1652, 1756 |
| Sau96I | GGNCC | 2 cut(s) | 965, 966 |
| ScaI | AGTACT | 2 cut(s) | 860, 1711 |
| SchI | GAGTC | 5 cut(s) | 364, 627, 1463, 1547, 1733 |
| ScrFI | CCNGG | 3 cut(s) | 342, 1064, 1153 |
| SduI | GDGCHC | 3 cut(s) | 186, 244, 969 |
| SfaNI | GCATC | 4 cut(s) | 153, 424, 1107, 1842 |
| SfcI | CTRYAG | 2 cut(s) | 120, 1677 |
| SfuI | TTCGAA | 1 cut(s) | 131 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 157, 620 |
| SmlI | CTYRAG | 1 cut(s) | 1039 |
| SmoI | CTYRAG | 1 cut(s) | 1039 |
| SsiI | CCGC | 2 cut(s) | 1461, 1997 |
| SspMI | CTAG | 4 cut(s) | 297, 402, 702, 1719 |
| StyD4I | CCNGG | 3 cut(s) | 340, 1062, 1151 |
| StyI | CCWWGG | 1 cut(s) | 1268 |
| TaaI | ACNGT | 3 cut(s) | 60, 457, 1714 |
| TaqI | TCGA | 4 cut(s) | 131, 791, 1563, 1755 |
| TatI | WGTACW | 2 cut(s) | 858, 1709 |
| TfiI | GAWTC | 3 cut(s) | 29, 398, 1699 |
| Tru1I | TTAA | 9 cut(s) | 531, 612, 717, 818, 882, 1233, 1280, 1356, 1775 |
| Tru9I | TTAA | 9 cut(s) | 531, 612, 717, 818, 882, 1233, 1280, 1356, 1775 |
| TscAI | CASTG | 2 cut(s) | 681, 817 |
| TseFI | GTSAC | 2 cut(s) | 1466, 1826 |
| TseI | GCWGC | 8 cut(s) | 145, 272, 449, 1458, 1673, 1952, 1955, 1994 |
| Tsp45I | GTSAC | 2 cut(s) | 1466, 1826 |
| TspRI | CASTG | 2 cut(s) | 681, 817 |
| Tth111I | GACNNNGTC | 1 cut(s) | 115 |
| XapI | RAATTY | 4 cut(s) | 4, 713, 946, 1619 |
| XbaI | TCTAGA | 1 cut(s) | 701 |
| XceI | RCATGY | 4 cut(s) | 441, 590, 726, 1504 |
| XmiI | GTMKAC | 2 cut(s) | 119, 1563 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1620 |
| XspI | CTAG | 4 cut(s) | 297, 402, 702, 1719 |
| ZrmI | AGTACT | 2 cut(s) | 860, 1711 |
| Zsp2I | ATGCAT | 2 cut(s) | 168, 439 |