Domain of unknown function (DUF4413)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 920 |
| Acc65I | GGTACC | 1 cut(s) | 1791 |
| AccB1I | GGYRCC | 1 cut(s) | 1791 |
| AciI | CCGC | 1 cut(s) | 40 |
| AclWI | GGATC | 8 cut(s) | 142, 339, 958, 1058, 1160, 1442, 1455, 1628 |
| AcsI | RAATTY | 7 cut(s) | 520, 697, 922, 1032, 1491, 1664, 1917 |
| AcuI | CTGAAG | 1 cut(s) | 464 |
| AcvI | CACGTG | 1 cut(s) | 1817 |
| AfaI | GTAC | 5 cut(s) | 111, 501, 638, 1624, 1793 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 864, 875 |
| AflIII | ACRYGT | 1 cut(s) | 913 |
| AjnI | CCWGG | 2 cut(s) | 1603, 1637 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 926, 958 |
| AluBI | AGCT | 6 cut(s) | 1124, 1215, 1549, 1598, 1614, 1902 |
| AluI | AGCT | 6 cut(s) | 1124, 1215, 1549, 1598, 1614, 1902 |
| Alw26I | GTCTC | 3 cut(s) | 280, 1534, 1670 |
| AlwI | GGATC | 8 cut(s) | 142, 339, 958, 1058, 1160, 1442, 1455, 1628 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1859 |
| AoxI | GGCC | 2 cut(s) | 866, 1011 |
| ApeKI | GCWGC | 3 cut(s) | 221, 908, 1611 |
| ApoI | RAATTY | 7 cut(s) | 520, 697, 922, 1032, 1491, 1664, 1917 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 453, 485 |
| AseI | ATTAAT | 1 cut(s) | 1328 |
| Asp718I | GGTACC | 1 cut(s) | 1791 |
| AspS9I | GGNCC | 4 cut(s) | 150, 382, 1012, 1777 |
| AsuHPI | GGTGA | 1 cut(s) | 284 |
| AvaII | GGWCC | 3 cut(s) | 150, 382, 1777 |
| AxyI | CCTNAGG | 2 cut(s) | 161, 1361 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1775, 1808 |
| BamHI | GGATCC | 1 cut(s) | 1447 |
| BanI | GGYRCC | 1 cut(s) | 1791 |
| BanII | GRGCYC | 1 cut(s) | 1349 |
| BbrPI | CACGTG | 1 cut(s) | 1817 |
| BbvI | GCAGC | 3 cut(s) | 233, 895, 1623 |
| BccI | CCATC | 7 cut(s) | 32, 757, 1086, 1529, 1804, 1868, 1951 |
| BceAI | ACGGC | 1 cut(s) | 1421 |
| BciT130I | CCWGG | 2 cut(s) | 1605, 1639 |
| BciVI | GTATCC | 1 cut(s) | 1287 |
| BclI | TGATCA | 3 cut(s) | 325, 376, 1585 |
| BcoDI | GTCTC | 3 cut(s) | 280, 1534, 1670 |
| BfaI | CTAG | 2 cut(s) | 1620, 1826 |
| BfmI | CTRYAG | 3 cut(s) | 538, 680, 1721 |
| BfuI | GTATCC | 1 cut(s) | 1287 |
| BglII | AGATCT | 1 cut(s) | 852 |
| BisI | GCNGC | 3 cut(s) | 222, 909, 1612 |
| BlsI | GCNGC | 3 cut(s) | 223, 910, 1613 |
| Bme1390I | CCNGG | 2 cut(s) | 1605, 1639 |
| Bme18I | GGWCC | 3 cut(s) | 150, 382, 1777 |
| BmgT120I | GGNCC | 4 cut(s) | 150, 382, 1012, 1777 |
| BmiI | GGNNCC | 4 cut(s) | 151, 1449, 1728, 1793 |
| BmrFI | CCNGG | 2 cut(s) | 1605, 1639 |
| BmrI | ACTGGG | 2 cut(s) | 778, 1079 |
| BmsI | GCATC | 3 cut(s) | 928, 1546, 1548 |
| BmuI | ACTGGG | 2 cut(s) | 778, 1079 |
| BoxI | GACNNNNGTC | 1 cut(s) | 387 |
| BpmI | CTGGAG | 1 cut(s) | 606 |
| BsaAI | YACGTR | 1 cut(s) | 1817 |
| BsaBI | GATNNNNATC | 1 cut(s) | 330 |
| BsaJI | CCNNGG | 3 cut(s) | 1637, 1638, 1787 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 839, 869 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 864, 875 |
| Bse1I | ACTGG | 2 cut(s) | 773, 1085 |
| Bse21I | CCTNAGG | 2 cut(s) | 161, 1361 |
| Bse3DI | GCAATG | 1 cut(s) | 431 |
| Bse8I | GATNNNNATC | 1 cut(s) | 330 |
| BseBI | CCWGG | 2 cut(s) | 1605, 1639 |
| BseDI | CCNNGG | 3 cut(s) | 1637, 1638, 1787 |
| BseGI | GGATG | 2 cut(s) | 349, 1531 |
| BseJI | GATNNNNATC | 1 cut(s) | 330 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 864, 875 |
| BseMI | GCAATG | 1 cut(s) | 431 |
| BseMII | CTCAG | 6 cut(s) | 142, 152, 944, 1293, 1375, 1697 |
| BseNI | ACTGG | 2 cut(s) | 773, 1085 |
| BseRI | GAGGAG | 2 cut(s) | 683, 1078 |
| BseXI | GCAGC | 3 cut(s) | 233, 895, 1623 |
| BseYI | CCCAGC | 1 cut(s) | 1038 |
| BsgI | GTGCAG | 3 cut(s) | 636, 894, 1435 |
| BshFI | GGCC | 2 cut(s) | 868, 1013 |
| BshNI | GGYRCC | 1 cut(s) | 1791 |
| BslFI | GGGAC | 1 cut(s) | 163 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 864, 875 |
| BsmAI | GTCTC | 3 cut(s) | 280, 1534, 1670 |
| BsmFI | GGGAC | 1 cut(s) | 163 |
| BsmI | GAATGC | 2 cut(s) | 1862, 1915 |
| BsnI | GGCC | 2 cut(s) | 868, 1013 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1349 |
| Bsp1407I | TGTACA | 1 cut(s) | 109 |
| BspACI | CCGC | 1 cut(s) | 40 |
| BspANI | GGCC | 2 cut(s) | 868, 1013 |
| BspCNI | CTCAG | 6 cut(s) | 141, 153, 945, 1294, 1374, 1696 |
| BspLI | GGNNCC | 4 cut(s) | 151, 1449, 1728, 1793 |
| BspMAI | CTGCAG | 1 cut(s) | 684 |
| BspPI | GGATC | 8 cut(s) | 142, 339, 958, 1058, 1160, 1442, 1455, 1628 |
| BspT107I | GGYRCC | 1 cut(s) | 1791 |
| BsrDI | GCAATG | 1 cut(s) | 431 |
| BsrGI | TGTACA | 1 cut(s) | 109 |
| BsrI | ACTGG | 2 cut(s) | 773, 1085 |
| BssECI | CCNNGG | 3 cut(s) | 1637, 1638, 1787 |
| BssT1I | CCWWGG | 1 cut(s) | 1787 |
| Bst2UI | CCWGG | 2 cut(s) | 1605, 1639 |
| Bst4CI | ACNGT | 5 cut(s) | 116, 250, 386, 782, 1058 |
| Bst6I | CTCTTC | 1 cut(s) | 221 |
| BstAUI | TGTACA | 1 cut(s) | 109 |
| BstBAI | YACGTR | 1 cut(s) | 1817 |
| BstC8I | GCNNGC | 3 cut(s) | 406, 1904, 1940 |
| BstDEI | CTNAG | 7 cut(s) | 128, 161, 836, 953, 1302, 1361, 1683 |
| BstEII | GGTNACC | 1 cut(s) | 425 |
| BstF5I | GGATG | 2 cut(s) | 349, 1531 |
| BstMAI | GTCTC | 3 cut(s) | 280, 1534, 1670 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 947 |
| BstNI | CCWGG | 2 cut(s) | 1605, 1639 |
| BstNSI | RCATGY | 2 cut(s) | 917, 1107 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 387 |
| BstPI | GGTNACC | 1 cut(s) | 425 |
| BstSCI | CCNGG | 2 cut(s) | 1603, 1637 |
| BstSFI | CTRYAG | 3 cut(s) | 538, 680, 1721 |
| BstV1I | GCAGC | 3 cut(s) | 233, 895, 1623 |
| BstX2I | RGATCY | 2 cut(s) | 852, 1447 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1046, 1092 |
| BstYI | RGATCY | 2 cut(s) | 852, 1447 |
| Bsu36I | CCTNAGG | 2 cut(s) | 161, 1361 |
| BsuI | GTATCC | 1 cut(s) | 1287 |
| BsuRI | GGCC | 2 cut(s) | 868, 1013 |
| BtgZI | GCGATG | 1 cut(s) | 193 |
| BtsCI | GGATG | 2 cut(s) | 349, 1531 |
| BtsI | GCAGTG | 1 cut(s) | 1636 |
| BtsIMutI | CAGTG | 6 cut(s) | 112, 136, 816, 950, 1063, 1636 |
| Cac8I | GCNNGC | 3 cut(s) | 406, 1904, 1940 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1859 |
| Cfr13I | GGNCC | 4 cut(s) | 150, 382, 1012, 1777 |
| Csp6I | GTAC | 5 cut(s) | 110, 500, 637, 1623, 1792 |
| CviAII | CATG | 8 cut(s) | 409, 422, 584, 881, 914, 1104, 1163, 1807 |
| CviQI | GTAC | 5 cut(s) | 110, 500, 637, 1623, 1792 |
| DdeI | CTNAG | 7 cut(s) | 128, 161, 836, 953, 1302, 1361, 1683 |
| Eam1104I | CTCTTC | 1 cut(s) | 221 |
| EarI | CTCTTC | 1 cut(s) | 221 |
| Eco130I | CCWWGG | 1 cut(s) | 1787 |
| Eco147I | AGGCCT | 1 cut(s) | 868 |
| Eco24I | GRGCYC | 1 cut(s) | 1349 |
| Eco32I | GATATC | 1 cut(s) | 535 |
| Eco47I | GGWCC | 3 cut(s) | 150, 382, 1777 |
| Eco57I | CTGAAG | 1 cut(s) | 464 |
| Eco72I | CACGTG | 1 cut(s) | 1817 |
| Eco81I | CCTNAGG | 2 cut(s) | 161, 1361 |
| Eco91I | GGTNACC | 1 cut(s) | 425 |
| EcoO65I | GGTNACC | 1 cut(s) | 425 |
| EcoRII | CCWGG | 2 cut(s) | 1603, 1637 |
| EcoRV | GATATC | 1 cut(s) | 535 |
| EcoT14I | CCWWGG | 1 cut(s) | 1787 |
| EcoT22I | ATGCAT | 2 cut(s) | 1261, 1561 |
| EcoT38I | GRGCYC | 1 cut(s) | 1349 |
| ErhI | CCWWGG | 1 cut(s) | 1787 |
| FaeI | CATG | 8 cut(s) | 412, 425, 587, 884, 917, 1107, 1166, 1810 |
| FaqI | GGGAC | 1 cut(s) | 163 |
| FatI | CATG | 8 cut(s) | 408, 421, 583, 880, 913, 1103, 1162, 1806 |
| FbaI | TGATCA | 3 cut(s) | 325, 376, 1585 |
| Fnu4HI | GCNGC | 3 cut(s) | 222, 909, 1612 |
| FokI | GGATG | 2 cut(s) | 356, 1538 |
| FriOI | GRGCYC | 1 cut(s) | 1349 |
| Fsp4HI | GCNGC | 3 cut(s) | 222, 909, 1612 |
| FspBI | CTAG | 2 cut(s) | 1620, 1826 |
| GluI | GCNGC | 3 cut(s) | 222, 909, 1612 |
| GsaI | CCCAGC | 1 cut(s) | 1042 |
| GsuI | CTGGAG | 1 cut(s) | 606 |
| HaeIII | GGCC | 2 cut(s) | 868, 1013 |
| Hin1II | CATG | 8 cut(s) | 412, 425, 587, 884, 917, 1107, 1166, 1810 |
| HincII | GTYRAC | 2 cut(s) | 45, 1842 |
| HindII | GTYRAC | 2 cut(s) | 45, 1842 |
| HindIII | AAGCTT | 1 cut(s) | 1213 |
| HinfI | GANTC | 7 cut(s) | 61, 166, 456, 973, 1097, 1455, 1856 |
| HphI | GGTGA | 1 cut(s) | 284 |
| Hpy166II | GTNNAC | 7 cut(s) | 45, 110, 112, 1004, 1318, 1780, 1842 |
| Hpy188I | TCNGA | 8 cut(s) | 186, 336, 742, 1183, 1281, 1534, 1686, 1705 |
| Hpy188III | TCNNGA | 9 cut(s) | 28, 329, 380, 472, 517, 623, 1301, 1459, 1922 |
| Hpy8I | GTNNAC | 7 cut(s) | 45, 110, 112, 1004, 1318, 1780, 1842 |
| HpyAV | CCTTC | 6 cut(s) | 76, 225, 488, 620, 1645, 1768 |
| HpyCH4III | ACNGT | 5 cut(s) | 116, 250, 386, 782, 1058 |
| HpyCH4IV | ACGT | 1 cut(s) | 1816 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 947 |
| HpyF3I | CTNAG | 7 cut(s) | 128, 161, 836, 953, 1302, 1361, 1683 |
| HpySE526I | ACGT | 1 cut(s) | 1816 |
| Hsp92II | CATG | 8 cut(s) | 412, 425, 587, 884, 917, 1107, 1166, 1810 |
| KpnI | GGTACC | 1 cut(s) | 1795 |
| Ksp22I | TGATCA | 3 cut(s) | 325, 376, 1585 |
| LmnI | GCTCC | 3 cut(s) | 1407, 1546, 1726 |
| Lsp1109I | GCAGC | 3 cut(s) | 233, 895, 1623 |
| LweI | GCATC | 3 cut(s) | 928, 1546, 1548 |
| MaeI | CTAG | 2 cut(s) | 1620, 1826 |
| MaeII | ACGT | 1 cut(s) | 1816 |
| MaeIII | GTNAC | 5 cut(s) | 116, 352, 425, 703, 1696 |
| MboII | GAAGA | 3 cut(s) | 238, 697, 1528 |
| MflI | RGATCY | 2 cut(s) | 852, 1447 |
| MhlI | GDGCHC | 1 cut(s) | 1349 |
| MmeI | TCCRAC | 2 cut(s) | 924, 1304 |
| Mph1103I | ATGCAT | 2 cut(s) | 1261, 1561 |
| MseI | TTAA | 9 cut(s) | 303, 594, 843, 987, 1187, 1328, 1376, 1755, 1964 |
| MslI | CAYNNNNRTG | 1 cut(s) | 726 |
| MspR9I | CCNGG | 2 cut(s) | 1605, 1639 |
| Mva1269I | GAATGC | 2 cut(s) | 1862, 1915 |
| MvaI | CCWGG | 2 cut(s) | 1605, 1639 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 947 |
| NlaIII | CATG | 8 cut(s) | 412, 425, 587, 884, 917, 1107, 1166, 1810 |
| NlaIV | GGNNCC | 4 cut(s) | 151, 1449, 1728, 1793 |
| NmuCI | GTSAC | 2 cut(s) | 703, 1696 |
| NsiI | ATGCAT | 2 cut(s) | 1261, 1561 |
| NspI | RCATGY | 2 cut(s) | 917, 1107 |
| PasI | CCCWGGG | 1 cut(s) | 1638 |
| PceI | AGGCCT | 1 cut(s) | 868 |
| PciI | ACATGT | 1 cut(s) | 913 |
| PctI | GAATGC | 2 cut(s) | 1862, 1915 |
| PfeI | GAWTC | 7 cut(s) | 61, 166, 456, 973, 1097, 1455, 1856 |
| PkrI | GCNGC | 3 cut(s) | 223, 910, 1613 |
| PmaCI | CACGTG | 1 cut(s) | 1817 |
| PmlI | CACGTG | 1 cut(s) | 1817 |
| Ppu21I | YACGTR | 1 cut(s) | 1817 |
| PscI | ACATGT | 1 cut(s) | 913 |
| PshAI | GACNNNNGTC | 1 cut(s) | 387 |
| PshBI | ATTAAT | 1 cut(s) | 1328 |
| PsiI | TTATAA | 1 cut(s) | 920 |
| Psp6I | CCWGG | 2 cut(s) | 1603, 1637 |
| PspCI | CACGTG | 1 cut(s) | 1817 |
| PspEI | GGTNACC | 1 cut(s) | 425 |
| PspFI | CCCAGC | 1 cut(s) | 1038 |
| PspGI | CCWGG | 2 cut(s) | 1603, 1637 |
| PspN4I | GGNNCC | 4 cut(s) | 151, 1449, 1728, 1793 |
| PspPI | GGNCC | 4 cut(s) | 150, 382, 1012, 1777 |
| PstI | CTGCAG | 1 cut(s) | 684 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1859 |
| PsuI | RGATCY | 2 cut(s) | 852, 1447 |
| RsaI | GTAC | 5 cut(s) | 111, 501, 638, 1624, 1793 |
| RsaNI | GTAC | 5 cut(s) | 110, 500, 637, 1623, 1792 |
| RseI | CAYNNNNRTG | 1 cut(s) | 726 |
| SaqAI | TTAA | 9 cut(s) | 303, 594, 843, 987, 1187, 1328, 1376, 1755, 1964 |
| SatI | GCNGC | 3 cut(s) | 222, 909, 1612 |
| Sau96I | GGNCC | 4 cut(s) | 150, 382, 1012, 1777 |
| ScrFI | CCNGG | 2 cut(s) | 1605, 1639 |
| SduI | GDGCHC | 1 cut(s) | 1349 |
| SfaNI | GCATC | 3 cut(s) | 928, 1546, 1548 |
| SfcI | CTRYAG | 3 cut(s) | 538, 680, 1721 |
| SinI | GGWCC | 3 cut(s) | 150, 382, 1777 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 726 |
| SseBI | AGGCCT | 1 cut(s) | 868 |
| SsiI | CCGC | 1 cut(s) | 40 |
| SspI | AATATT | 1 cut(s) | 1403 |
| SspMI | CTAG | 2 cut(s) | 1620, 1826 |
| StuI | AGGCCT | 1 cut(s) | 868 |
| StyD4I | CCNGG | 2 cut(s) | 1603, 1637 |
| StyI | CCWWGG | 1 cut(s) | 1787 |
| TaaI | ACNGT | 5 cut(s) | 116, 250, 386, 782, 1058 |
| TaiI | ACGT | 1 cut(s) | 1819 |
| TaqI | TCGA | 6 cut(s) | 516, 926, 976, 1090, 1897, 1921 |
| TatI | WGTACW | 1 cut(s) | 109 |
| TfiI | GAWTC | 7 cut(s) | 61, 166, 456, 973, 1097, 1455, 1856 |
| Tru1I | TTAA | 9 cut(s) | 303, 594, 843, 987, 1187, 1328, 1376, 1755, 1964 |
| Tru9I | TTAA | 9 cut(s) | 303, 594, 843, 987, 1187, 1328, 1376, 1755, 1964 |
| TscAI | CASTG | 6 cut(s) | 119, 136, 823, 957, 1063, 1636 |
| TseFI | GTSAC | 2 cut(s) | 703, 1696 |
| TseI | GCWGC | 3 cut(s) | 221, 908, 1611 |
| Tsp45I | GTSAC | 2 cut(s) | 703, 1696 |
| TspRI | CASTG | 6 cut(s) | 119, 136, 823, 957, 1063, 1636 |
| VpaK11BI | GGWCC | 3 cut(s) | 150, 382, 1777 |
| VspI | ATTAAT | 1 cut(s) | 1328 |
| XapI | RAATTY | 7 cut(s) | 520, 697, 922, 1032, 1491, 1664, 1917 |
| XceI | RCATGY | 2 cut(s) | 917, 1107 |
| XspI | CTAG | 2 cut(s) | 1620, 1826 |
| Zsp2I | ATGCAT | 2 cut(s) | 1261, 1561 |