Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 19 - 102 | 5.9e-28 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 196 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 115 |
| AciI | CCGC | 1 cut(s) | 365 |
| AclWI | GGATC | 1 cut(s) | 236 |
| AcsI | RAATTY | 1 cut(s) | 393 |
| AcuI | CTGAAG | 1 cut(s) | 202 |
| AfaI | GTAC | 1 cut(s) | 186 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 115, 271 |
| AgsI | TTSAA | 4 cut(s) | 96, 294, 331, 436 |
| AluBI | AGCT | 3 cut(s) | 19, 105, 370 |
| AluI | AGCT | 3 cut(s) | 19, 105, 370 |
| AlwI | GGATC | 1 cut(s) | 236 |
| ApoI | RAATTY | 1 cut(s) | 393 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 8 |
| AspLEI | GCGC | 2 cut(s) | 215, 283 |
| AspS9I | GGNCC | 1 cut(s) | 88 |
| AvaII | GGWCC | 1 cut(s) | 88 |
| BccI | CCATC | 2 cut(s) | 88, 373 |
| BfaI | CTAG | 2 cut(s) | 141, 204 |
| BfoI | RGCGCY | 2 cut(s) | 216, 284 |
| BfuAI | ACCTGC | 1 cut(s) | 196 |
| Bme18I | GGWCC | 1 cut(s) | 88 |
| BmgT120I | GGNCC | 1 cut(s) | 88 |
| BmiI | GGNNCC | 3 cut(s) | 78, 90, 336 |
| BmsI | GCATC | 1 cut(s) | 200 |
| BpmI | CTGGAG | 1 cut(s) | 95 |
| Bpu10I | CCTNAGC | 1 cut(s) | 20 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 115, 271 |
| Bse1I | ACTGG | 1 cut(s) | 305 |
| BseGI | GGATG | 3 cut(s) | 40, 178, 352 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 115, 271 |
| BseMII | CTCAG | 1 cut(s) | 75 |
| BseNI | ACTGG | 1 cut(s) | 305 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 115, 271 |
| Bsp143I | GATC | 2 cut(s) | 45, 241 |
| BspACI | CCGC | 1 cut(s) | 365 |
| BspCNI | CTCAG | 1 cut(s) | 76 |
| BspHI | TCATGA | 1 cut(s) | 12 |
| BspLI | GGNNCC | 3 cut(s) | 78, 90, 336 |
| BspMI | ACCTGC | 1 cut(s) | 196 |
| BspPI | GGATC | 1 cut(s) | 236 |
| BsrI | ACTGG | 1 cut(s) | 305 |
| BssMI | GATC | 2 cut(s) | 45, 241 |
| BstC8I | GCNNGC | 1 cut(s) | 320 |
| BstDEI | CTNAG | 2 cut(s) | 20, 84 |
| BstF5I | GGATG | 3 cut(s) | 40, 178, 352 |
| BstH2I | RGCGCY | 2 cut(s) | 216, 284 |
| BstHHI | GCGC | 2 cut(s) | 215, 283 |
| BstKTI | GATC | 2 cut(s) | 48, 244 |
| BstMBI | GATC | 2 cut(s) | 45, 241 |
| BstX2I | RGATCY | 1 cut(s) | 241 |
| BstYI | RGATCY | 1 cut(s) | 241 |
| BtsCI | GGATG | 3 cut(s) | 40, 178, 352 |
| BveI | ACCTGC | 1 cut(s) | 196 |
| Cac8I | GCNNGC | 1 cut(s) | 320 |
| CciI | TCATGA | 1 cut(s) | 12 |
| CfoI | GCGC | 2 cut(s) | 215, 283 |
| Cfr13I | GGNCC | 1 cut(s) | 88 |
| Csp6I | GTAC | 1 cut(s) | 185 |
| CviAII | CATG | 1 cut(s) | 13 |
| CviJI | RGCY | 7 cut(s) | 19, 79, 105, 311, 322, 337, 370 |
| CviKI_1 | RGCY | 7 cut(s) | 19, 79, 105, 311, 322, 337, 370 |
| CviQI | GTAC | 1 cut(s) | 185 |
| DdeI | CTNAG | 2 cut(s) | 20, 84 |
| DpnI | GATC | 2 cut(s) | 47, 243 |
| DpnII | GATC | 2 cut(s) | 45, 241 |
| Eco47I | GGWCC | 1 cut(s) | 88 |
| Eco57I | CTGAAG | 1 cut(s) | 202 |
| EcoO109I | RGGNCCY | 1 cut(s) | 88 |
| FaeI | CATG | 1 cut(s) | 16 |
| FaiI | YATR | 4 cut(s) | 14, 179, 341, 363 |
| FatI | CATG | 1 cut(s) | 12 |
| FokI | GGATG | 3 cut(s) | 47, 185, 359 |
| FspBI | CTAG | 2 cut(s) | 141, 204 |
| GlaI | GCGC | 2 cut(s) | 214, 282 |
| GsuI | CTGGAG | 1 cut(s) | 95 |
| HaeII | RGCGCY | 2 cut(s) | 216, 284 |
| HhaI | GCGC | 2 cut(s) | 215, 283 |
| Hin1II | CATG | 1 cut(s) | 16 |
| Hin6I | GCGC | 2 cut(s) | 213, 281 |
| HinP1I | GCGC | 2 cut(s) | 213, 281 |
| HindIII | AAGCTT | 2 cut(s) | 17, 103 |
| Hpy188I | TCNGA | 1 cut(s) | 85 |
| Hpy188III | TCNNGA | 2 cut(s) | 13, 43 |
| Hpy99I | CGWCG | 1 cut(s) | 44 |
| HpyAV | CCTTC | 2 cut(s) | 102, 226 |
| HpyCH4V | TGCA | 2 cut(s) | 167, 191 |
| HpyF3I | CTNAG | 2 cut(s) | 20, 84 |
| Hsp92II | CATG | 1 cut(s) | 16 |
| HspAI | GCGC | 2 cut(s) | 213, 281 |
| Kzo9I | GATC | 2 cut(s) | 45, 241 |
| LmnI | GCTCC | 3 cut(s) | 76, 334, 367 |
| LpnPI | CCDG | 6 cut(s) | 11, 59, 101, 201, 286, 356 |
| LweI | GCATC | 1 cut(s) | 200 |
| MaeI | CTAG | 2 cut(s) | 141, 204 |
| MaeIII | GTNAC | 1 cut(s) | 296 |
| MalI | GATC | 2 cut(s) | 47, 243 |
| MboI | GATC | 2 cut(s) | 45, 241 |
| MflI | RGATCY | 1 cut(s) | 241 |
| MluCI | AATT | 3 cut(s) | 133, 351, 393 |
| MnlI | CCTC | 3 cut(s) | 79, 225, 271 |
| MroXI | GAANNNNTTC | 1 cut(s) | 8 |
| MseI | TTAA | 1 cut(s) | 305 |
| NdeII | GATC | 2 cut(s) | 45, 241 |
| NlaIII | CATG | 1 cut(s) | 16 |
| NlaIV | GGNNCC | 3 cut(s) | 78, 90, 336 |
| NmuCI | GTSAC | 1 cut(s) | 296 |
| PagI | TCATGA | 1 cut(s) | 12 |
| PdmI | GAANNNNTTC | 1 cut(s) | 8 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 115 |
| PpuMI | RGGWCCY | 1 cut(s) | 88 |
| Psp5II | RGGWCCY | 1 cut(s) | 88 |
| PspN4I | GGNNCC | 3 cut(s) | 78, 90, 336 |
| PspPI | GGNCC | 1 cut(s) | 88 |
| PspPPI | RGGWCCY | 1 cut(s) | 88 |
| PsuI | RGATCY | 1 cut(s) | 241 |
| RsaI | GTAC | 1 cut(s) | 186 |
| RsaNI | GTAC | 1 cut(s) | 185 |
| SaqAI | TTAA | 1 cut(s) | 305 |
| Sau3AI | GATC | 2 cut(s) | 45, 241 |
| Sau96I | GGNCC | 1 cut(s) | 88 |
| SetI | ASST | 5 cut(s) | 21, 107, 190, 372, 391 |
| SfaNI | GCATC | 1 cut(s) | 200 |
| SinI | GGWCC | 1 cut(s) | 88 |
| Sse9I | AATT | 3 cut(s) | 133, 351, 393 |
| SsiI | CCGC | 1 cut(s) | 365 |
| SspMI | CTAG | 2 cut(s) | 141, 204 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 3 cut(s) | 133, 351, 393 |
| Tru1I | TTAA | 1 cut(s) | 305 |
| Tru9I | TTAA | 1 cut(s) | 305 |
| TseFI | GTSAC | 1 cut(s) | 296 |
| Tsp45I | GTSAC | 1 cut(s) | 296 |
| TspDTI | ATGAA | 5 cut(s) | 17, 29, 69, 363, 399 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 115 |
| VpaK11BI | GGWCC | 1 cut(s) | 88 |
| XapI | RAATTY | 1 cut(s) | 393 |
| XmnI | GAANNNNTTC | 1 cut(s) | 8 |
| XspI | CTAG | 2 cut(s) | 141, 204 |