Zinc finger BED domain-containing protein RICESLEEPER
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 355 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 179 |
| AccII | CGCG | 2 cut(s) | 46, 872 |
| AciI | CCGC | 3 cut(s) | 136, 870, 872 |
| AclWI | GGATC | 1 cut(s) | 594 |
| AfaI | GTAC | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 34, 179, 219, 694 |
| AgsI | TTSAA | 5 cut(s) | 341, 464, 650, 736, 827 |
| AhlI | ACTAGT | 1 cut(s) | 440 |
| AjnI | CCWGG | 1 cut(s) | 81 |
| AluBI | AGCT | 5 cut(s) | 145, 566, 602, 757, 805 |
| AluI | AGCT | 5 cut(s) | 145, 566, 602, 757, 805 |
| Alw21I | GWGCWC | 1 cut(s) | 118 |
| Alw44I | GTGCAC | 1 cut(s) | 114 |
| AlwI | GGATC | 1 cut(s) | 594 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 683 |
| Ama87I | CYCGRG | 1 cut(s) | 27 |
| ApaLI | GTGCAC | 1 cut(s) | 114 |
| ApeKI | GCWGC | 3 cut(s) | 307, 361, 602 |
| AsuC2I | CCSGG | 1 cut(s) | 486 |
| AsuHPI | GGTGA | 1 cut(s) | 133 |
| AsuII | TTCGAA | 1 cut(s) | 370 |
| AvaI | CYCGRG | 1 cut(s) | 27 |
| BaeGI | GKGCMC | 1 cut(s) | 118 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 160, 192 |
| Bbv12I | GWGCWC | 1 cut(s) | 118 |
| BbvI | GCAGC | 3 cut(s) | 294, 373, 589 |
| BccI | CCATC | 4 cut(s) | 344, 524, 616, 712 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 350, 384 |
| BciT130I | CCWGG | 1 cut(s) | 83 |
| BciVI | GTATCC | 1 cut(s) | 492 |
| BcnI | CCSGG | 1 cut(s) | 486 |
| BcuI | ACTAGT | 1 cut(s) | 440 |
| BfaI | CTAG | 5 cut(s) | 441, 558, 563, 708, 758 |
| BfmI | CTRYAG | 1 cut(s) | 603 |
| BfuAI | ACCTGC | 1 cut(s) | 355 |
| BfuI | GTATCC | 1 cut(s) | 492 |
| BisI | GCNGC | 5 cut(s) | 308, 362, 603, 870, 873 |
| BlsI | GCNGC | 5 cut(s) | 309, 363, 604, 871, 874 |
| Bme1390I | CCNGG | 2 cut(s) | 83, 486 |
| BmeT110I | CYCGRG | 1 cut(s) | 27 |
| BmrFI | CCNGG | 2 cut(s) | 83, 486 |
| BmsI | GCATC | 4 cut(s) | 81, 249, 348, 736 |
| Bpu14I | TTCGAA | 1 cut(s) | 370 |
| BpuMI | CCSGG | 1 cut(s) | 486 |
| BsaJI | CCNNGG | 3 cut(s) | 28, 104, 870 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 526, 556 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 34, 179, 219, 694 |
| Bse1I | ACTGG | 3 cut(s) | 20, 123, 199 |
| BseBI | CCWGG | 1 cut(s) | 83 |
| BseDI | CCNNGG | 3 cut(s) | 28, 104, 870 |
| BseGI | GGATG | 2 cut(s) | 154, 631 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 34, 179, 219, 694 |
| BseMII | CTCAG | 2 cut(s) | 66, 288 |
| BseNI | ACTGG | 3 cut(s) | 20, 123, 199 |
| BseRI | GAGGAG | 1 cut(s) | 93 |
| BseSI | GKGCMC | 1 cut(s) | 118 |
| BseXI | GCAGC | 3 cut(s) | 294, 373, 589 |
| BsgI | GTGCAG | 3 cut(s) | 173, 293, 797 |
| Bsh1236I | CGCG | 2 cut(s) | 46, 872 |
| BsiHKAI | GWGCWC | 1 cut(s) | 118 |
| BsiHKCI | CYCGRG | 1 cut(s) | 27 |
| BsiSI | CCGG | 1 cut(s) | 485 |
| BslFI | GGGAC | 4 cut(s) | 141, 286, 451, 671 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 34, 179, 219, 694 |
| BsmFI | GGGAC | 4 cut(s) | 141, 286, 451, 671 |
| BsmI | GAATGC | 1 cut(s) | 62 |
| BsoBI | CYCGRG | 1 cut(s) | 27 |
| Bsp119I | TTCGAA | 1 cut(s) | 370 |
| Bsp1286I | GDGCHC | 1 cut(s) | 118 |
| Bsp143I | GATC | 2 cut(s) | 293, 586 |
| Bsp68I | TCGCGA | 1 cut(s) | 46 |
| BspACI | CCGC | 3 cut(s) | 136, 870, 872 |
| BspCNI | CTCAG | 2 cut(s) | 65, 289 |
| BspFNI | CGCG | 2 cut(s) | 46, 872 |
| BspMAI | CTGCAG | 1 cut(s) | 607 |
| BspMI | ACCTGC | 1 cut(s) | 355 |
| BspPI | GGATC | 1 cut(s) | 594 |
| BspT104I | TTCGAA | 1 cut(s) | 370 |
| BsrI | ACTGG | 3 cut(s) | 20, 123, 199 |
| BssECI | CCNNGG | 3 cut(s) | 28, 104, 870 |
| BssMI | GATC | 2 cut(s) | 293, 586 |
| Bst2UI | CCWGG | 1 cut(s) | 83 |
| Bst4CI | ACNGT | 3 cut(s) | 113, 576, 729 |
| Bst6I | CTCTTC | 1 cut(s) | 255 |
| BstBI | TTCGAA | 1 cut(s) | 370 |
| BstC8I | GCNNGC | 1 cut(s) | 885 |
| BstDEI | CTNAG | 5 cut(s) | 11, 52, 297, 449, 879 |
| BstDSI | CCRYGG | 1 cut(s) | 870 |
| BstF5I | GGATG | 2 cut(s) | 154, 631 |
| BstFNI | CGCG | 2 cut(s) | 46, 872 |
| BstKTI | GATC | 2 cut(s) | 296, 589 |
| BstMBI | GATC | 2 cut(s) | 293, 586 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 142, 151 |
| BstNI | CCWGG | 1 cut(s) | 83 |
| BstNSI | RCATGY | 2 cut(s) | 819, 887 |
| BstSCI | CCNGG | 2 cut(s) | 81, 484 |
| BstSFI | CTRYAG | 1 cut(s) | 603 |
| BstSLI | GKGCMC | 1 cut(s) | 118 |
| BstUI | CGCG | 2 cut(s) | 46, 872 |
| BstV1I | GCAGC | 3 cut(s) | 294, 373, 589 |
| BsuI | GTATCC | 1 cut(s) | 492 |
| BtgI | CCRYGG | 1 cut(s) | 870 |
| BtsCI | GGATG | 2 cut(s) | 154, 631 |
| BtsIMutI | CAGTG | 2 cut(s) | 116, 684 |
| BtuMI | TCGCGA | 1 cut(s) | 46 |
| BveI | ACCTGC | 1 cut(s) | 355 |
| Cac8I | GCNNGC | 1 cut(s) | 885 |
| CaiI | CAGNNNCTG | 1 cut(s) | 683 |
| Cfr42I | CCGCGG | 1 cut(s) | 873 |
| Csp6I | GTAC | 1 cut(s) | 109 |
| CviAII | CATG | 3 cut(s) | 383, 816, 884 |
| CviQI | GTAC | 1 cut(s) | 109 |
| DdeI | CTNAG | 5 cut(s) | 11, 52, 297, 449, 879 |
| DpnI | GATC | 2 cut(s) | 295, 588 |
| DpnII | GATC | 2 cut(s) | 293, 586 |
| Eam1104I | CTCTTC | 1 cut(s) | 255 |
| EarI | CTCTTC | 1 cut(s) | 255 |
| EciI | GGCGGA | 1 cut(s) | 151 |
| Eco88I | CYCGRG | 1 cut(s) | 27 |
| EcoRII | CCWGG | 1 cut(s) | 81 |
| FaeI | CATG | 3 cut(s) | 386, 819, 887 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 386, 418 |
| FaqI | GGGAC | 4 cut(s) | 141, 286, 451, 671 |
| FatI | CATG | 3 cut(s) | 382, 815, 883 |
| FauNDI | CATATG | 1 cut(s) | 427 |
| Fnu4HI | GCNGC | 5 cut(s) | 308, 362, 603, 870, 873 |
| FokI | GGATG | 2 cut(s) | 161, 638 |
| Fsp4HI | GCNGC | 5 cut(s) | 308, 362, 603, 870, 873 |
| FspBI | CTAG | 5 cut(s) | 441, 558, 563, 708, 758 |
| GluI | GCNGC | 5 cut(s) | 308, 362, 603, 870, 873 |
| HapII | CCGG | 1 cut(s) | 485 |
| Hin1II | CATG | 3 cut(s) | 386, 819, 887 |
| HindIII | AAGCTT | 1 cut(s) | 803 |
| HinfI | GANTC | 8 cut(s) | 16, 48, 78, 91, 98, 422, 700, 823 |
| HpaII | CCGG | 1 cut(s) | 485 |
| HphI | GGTGA | 1 cut(s) | 133 |
| Hpy166II | GTNNAC | 3 cut(s) | 116, 170, 554 |
| Hpy188I | TCNGA | 5 cut(s) | 7, 55, 77, 222, 298 |
| Hpy188III | TCNNGA | 4 cut(s) | 45, 95, 205, 464 |
| Hpy8I | GTNNAC | 3 cut(s) | 116, 170, 554 |
| HpyAV | CCTTC | 7 cut(s) | 32, 186, 263, 447, 644, 649, 763 |
| HpyCH4III | ACNGT | 3 cut(s) | 113, 576, 729 |
| HpyCH4V | TGCA | 9 cut(s) | 116, 154, 310, 361, 605, 644, 749, 778, 887 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 142, 151 |
| HpyF3I | CTNAG | 5 cut(s) | 11, 52, 297, 449, 879 |
| Hsp92II | CATG | 3 cut(s) | 386, 819, 887 |
| KspI | CCGCGG | 1 cut(s) | 873 |
| Kzo9I | GATC | 2 cut(s) | 293, 586 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| Lsp1109I | GCAGC | 3 cut(s) | 294, 373, 589 |
| LweI | GCATC | 4 cut(s) | 81, 249, 348, 736 |
| MaeI | CTAG | 5 cut(s) | 441, 558, 563, 708, 758 |
| MaeIII | GTNAC | 2 cut(s) | 22, 121 |
| MalI | GATC | 2 cut(s) | 295, 588 |
| MboI | GATC | 2 cut(s) | 293, 586 |
| MboII | GAAGA | 4 cut(s) | 272, 278, 331, 367 |
| MfeI | CAATTG | 1 cut(s) | 645 |
| MhlI | GDGCHC | 1 cut(s) | 118 |
| MluCI | AATT | 3 cut(s) | 629, 645, 852 |
| MlyI | GAGTC | 2 cut(s) | 10, 92 |
| MnlI | CCTC | 7 cut(s) | 23, 114, 256, 292, 759, 834, 894 |
| MseI | TTAA | 2 cut(s) | 404, 570 |
| MspA1I | CMGCKG | 1 cut(s) | 872 |
| MspI | CCGG | 1 cut(s) | 485 |
| MspR9I | CCNGG | 2 cut(s) | 83, 486 |
| MunI | CAATTG | 1 cut(s) | 645 |
| Mva1269I | GAATGC | 1 cut(s) | 62 |
| MvaI | CCWGG | 1 cut(s) | 83 |
| MvnI | CGCG | 2 cut(s) | 46, 872 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 142, 151 |
| NciI | CCSGG | 1 cut(s) | 486 |
| NdeI | CATATG | 1 cut(s) | 427 |
| NdeII | GATC | 2 cut(s) | 293, 586 |
| NlaIII | CATG | 3 cut(s) | 386, 819, 887 |
| NmuCI | GTSAC | 1 cut(s) | 121 |
| NruI | TCGCGA | 1 cut(s) | 46 |
| NspI | RCATGY | 2 cut(s) | 819, 887 |
| NspV | TTCGAA | 1 cut(s) | 370 |
| PaeI | GCATGC | 1 cut(s) | 887 |
| PctI | GAATGC | 1 cut(s) | 62 |
| PfeI | GAWTC | 6 cut(s) | 48, 78, 91, 422, 700, 823 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 179 |
| PkrI | GCNGC | 5 cut(s) | 309, 363, 604, 871, 874 |
| PleI | GAGTC | 2 cut(s) | 10, 92 |
| PpsI | GAGTC | 2 cut(s) | 10, 92 |
| Psp6I | CCWGG | 1 cut(s) | 81 |
| PspGI | CCWGG | 1 cut(s) | 81 |
| PstI | CTGCAG | 1 cut(s) | 607 |
| PstNI | CAGNNNCTG | 1 cut(s) | 683 |
| RruI | TCGCGA | 1 cut(s) | 46 |
| RsaI | GTAC | 1 cut(s) | 110 |
| RsaNI | GTAC | 1 cut(s) | 109 |
| SacII | CCGCGG | 1 cut(s) | 873 |
| SaqAI | TTAA | 2 cut(s) | 404, 570 |
| SatI | GCNGC | 5 cut(s) | 308, 362, 603, 870, 873 |
| Sau3AI | GATC | 2 cut(s) | 293, 586 |
| SchI | GAGTC | 2 cut(s) | 10, 92 |
| ScrFI | CCNGG | 2 cut(s) | 83, 486 |
| SduI | GDGCHC | 1 cut(s) | 118 |
| SfaNI | GCATC | 4 cut(s) | 81, 249, 348, 736 |
| SfcI | CTRYAG | 1 cut(s) | 603 |
| Sfr303I | CCGCGG | 1 cut(s) | 873 |
| SfuI | TTCGAA | 1 cut(s) | 370 |
| SgrBI | CCGCGG | 1 cut(s) | 873 |
| SpeI | ACTAGT | 1 cut(s) | 440 |
| SphI | GCATGC | 1 cut(s) | 887 |
| Sse9I | AATT | 3 cut(s) | 629, 645, 852 |
| SsiI | CCGC | 3 cut(s) | 136, 870, 872 |
| SspMI | CTAG | 5 cut(s) | 441, 558, 563, 708, 758 |
| StyD4I | CCNGG | 2 cut(s) | 81, 484 |
| TaaI | ACNGT | 3 cut(s) | 113, 576, 729 |
| TaqI | TCGA | 5 cut(s) | 206, 292, 370, 810, 861 |
| TasI | AATT | 3 cut(s) | 629, 645, 852 |
| TauI | GCSGC | 2 cut(s) | 872, 875 |
| TfiI | GAWTC | 6 cut(s) | 48, 78, 91, 422, 700, 823 |
| Tru1I | TTAA | 2 cut(s) | 404, 570 |
| Tru9I | TTAA | 2 cut(s) | 404, 570 |
| TscAI | CASTG | 2 cut(s) | 123, 684 |
| TseFI | GTSAC | 1 cut(s) | 121 |
| TseI | GCWGC | 3 cut(s) | 307, 361, 602 |
| Tsp45I | GTSAC | 1 cut(s) | 121 |
| TspDTI | ATGAA | 2 cut(s) | 414, 642 |
| TspGWI | ACGGA | 3 cut(s) | 50, 155, 202 |
| TspRI | CASTG | 2 cut(s) | 123, 684 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 179 |
| VneI | GTGCAC | 1 cut(s) | 114 |
| XceI | RCATGY | 2 cut(s) | 819, 887 |
| XspI | CTAG | 5 cut(s) | 441, 558, 563, 708, 758 |