Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 117 - 194 | 4.2e-24 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 303 |
| AccI | GTMKAC | 1 cut(s) | 534 |
| AciI | CCGC | 1 cut(s) | 588 |
| AclWI | GGATC | 1 cut(s) | 197 |
| AcsI | RAATTY | 3 cut(s) | 398, 405, 617 |
| AfaI | GTAC | 2 cut(s) | 162, 668 |
| AflIII | ACRYGT | 1 cut(s) | 300 |
| AgsI | TTSAA | 4 cut(s) | 80, 307, 404, 572 |
| AluBI | AGCT | 3 cut(s) | 98, 374, 685 |
| AluI | AGCT | 3 cut(s) | 98, 374, 685 |
| AlwI | GGATC | 1 cut(s) | 197 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 212 |
| ApeKI | GCWGC | 4 cut(s) | 104, 212, 287, 431 |
| ApoI | RAATTY | 3 cut(s) | 398, 405, 617 |
| AspS9I | GGNCC | 1 cut(s) | 583 |
| AsuHPI | GGTGA | 1 cut(s) | 625 |
| AvaII | GGWCC | 1 cut(s) | 583 |
| BbsI | GAAGAC | 1 cut(s) | 387 |
| BbvI | GCAGC | 4 cut(s) | 116, 199, 299, 418 |
| BccI | CCATC | 1 cut(s) | 652 |
| BceAI | ACGGC | 1 cut(s) | 332 |
| BciVI | GTATCC | 1 cut(s) | 450 |
| BfaI | CTAG | 2 cut(s) | 255, 686 |
| BfmI | CTRYAG | 1 cut(s) | 375 |
| BfuAI | ACCTGC | 1 cut(s) | 303 |
| BfuI | GTATCC | 1 cut(s) | 450 |
| BisI | GCNGC | 4 cut(s) | 105, 213, 288, 432 |
| BlsI | GCNGC | 4 cut(s) | 106, 214, 289, 433 |
| Bme18I | GGWCC | 1 cut(s) | 583 |
| BmgT120I | GGNCC | 1 cut(s) | 583 |
| BmiI | GGNNCC | 1 cut(s) | 585 |
| BpiI | GAAGAC | 1 cut(s) | 387 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 537, 569 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 690, 720 |
| Bse1I | ACTGG | 1 cut(s) | 206 |
| Bse3DI | GCAATG | 1 cut(s) | 29 |
| BseGI | GGATG | 2 cut(s) | 472, 709 |
| BseMI | GCAATG | 1 cut(s) | 29 |
| BseMII | CTCAG | 1 cut(s) | 78 |
| BseNI | ACTGG | 1 cut(s) | 206 |
| BseRI | GAGGAG | 1 cut(s) | 686 |
| BseXI | GCAGC | 4 cut(s) | 116, 199, 299, 418 |
| BsgI | GTGCAG | 1 cut(s) | 281 |
| BsiSI | CCGG | 1 cut(s) | 28 |
| BslFI | GGGAC | 1 cut(s) | 569 |
| BsmFI | GGGAC | 1 cut(s) | 569 |
| BsmI | GAATGC | 2 cut(s) | 433, 509 |
| Bsp143I | GATC | 1 cut(s) | 202 |
| BspACI | CCGC | 1 cut(s) | 588 |
| BspCNI | CTCAG | 1 cut(s) | 79 |
| BspLI | GGNNCC | 1 cut(s) | 585 |
| BspMI | ACCTGC | 1 cut(s) | 303 |
| BspPI | GGATC | 1 cut(s) | 197 |
| BsrDI | GCAATG | 1 cut(s) | 29 |
| BsrI | ACTGG | 1 cut(s) | 206 |
| BssMI | GATC | 1 cut(s) | 202 |
| Bst4CI | ACNGT | 1 cut(s) | 493 |
| BstDEI | CTNAG | 1 cut(s) | 87 |
| BstF5I | GGATG | 2 cut(s) | 472, 709 |
| BstKTI | GATC | 1 cut(s) | 205 |
| BstMBI | GATC | 1 cut(s) | 202 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 104 |
| BstNSI | RCATGY | 1 cut(s) | 304 |
| BstSFI | CTRYAG | 1 cut(s) | 375 |
| BstV1I | GCAGC | 4 cut(s) | 116, 199, 299, 418 |
| BstV2I | GAAGAC | 1 cut(s) | 387 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 244 |
| BsuI | GTATCC | 1 cut(s) | 450 |
| BtsCI | GGATG | 2 cut(s) | 472, 709 |
| BtsIMutI | CAGTG | 2 cut(s) | 213, 498 |
| BveI | ACCTGC | 1 cut(s) | 303 |
| CaiI | CAGNNNCTG | 1 cut(s) | 212 |
| Cfr13I | GGNCC | 1 cut(s) | 583 |
| Csp6I | GTAC | 2 cut(s) | 161, 667 |
| CviAII | CATG | 4 cut(s) | 11, 238, 284, 301 |
| CviJI | RGCY | 8 cut(s) | 98, 107, 212, 253, 374, 497, 548, 685 |
| CviKI_1 | RGCY | 8 cut(s) | 98, 107, 212, 253, 374, 497, 548, 685 |
| CviQI | GTAC | 2 cut(s) | 161, 667 |
| DdeI | CTNAG | 1 cut(s) | 87 |
| DpnI | GATC | 1 cut(s) | 204 |
| DpnII | GATC | 1 cut(s) | 202 |
| Eco47I | GGWCC | 1 cut(s) | 583 |
| FaeI | CATG | 4 cut(s) | 14, 241, 287, 304 |
| FaiI | YATR | 7 cut(s) | 12, 45, 192, 239, 285, 302, 566 |
| FaqI | GGGAC | 1 cut(s) | 569 |
| FatI | CATG | 4 cut(s) | 10, 237, 283, 300 |
| FauI | CCCGC | 1 cut(s) | 595 |
| FblI | GTMKAC | 1 cut(s) | 534 |
| Fnu4HI | GCNGC | 4 cut(s) | 105, 213, 288, 432 |
| FokI | GGATG | 2 cut(s) | 479, 716 |
| Fsp4HI | GCNGC | 4 cut(s) | 105, 213, 288, 432 |
| FspBI | CTAG | 2 cut(s) | 255, 686 |
| GluI | GCNGC | 4 cut(s) | 105, 213, 288, 432 |
| HapII | CCGG | 1 cut(s) | 28 |
| Hin1II | CATG | 4 cut(s) | 14, 241, 287, 304 |
| HinfI | GANTC | 2 cut(s) | 503, 641 |
| HpaII | CCGG | 1 cut(s) | 28 |
| HphI | GGTGA | 1 cut(s) | 625 |
| Hpy166II | GTNNAC | 1 cut(s) | 535 |
| Hpy188I | TCNGA | 2 cut(s) | 502, 545 |
| Hpy188III | TCNNGA | 1 cut(s) | 343 |
| Hpy8I | GTNNAC | 1 cut(s) | 535 |
| HpyAV | CCTTC | 4 cut(s) | 85, 121, 415, 566 |
| HpyCH4III | ACNGT | 1 cut(s) | 493 |
| HpyCH4V | TGCA | 8 cut(s) | 22, 104, 137, 194, 215, 287, 298, 434 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 104 |
| HpyF3I | CTNAG | 1 cut(s) | 87 |
| Hsp92II | CATG | 4 cut(s) | 14, 241, 287, 304 |
| Kzo9I | GATC | 1 cut(s) | 202 |
| LmnI | GCTCC | 2 cut(s) | 51, 95 |
| LpnPI | CCDG | 8 cut(s) | 41, 51, 219, 305, 308, 495, 587, 595 |
| Lsp1109I | GCAGC | 4 cut(s) | 116, 199, 299, 418 |
| MaeI | CTAG | 2 cut(s) | 255, 686 |
| MaeIII | GTNAC | 3 cut(s) | 13, 232, 312 |
| MalI | GATC | 1 cut(s) | 204 |
| MboI | GATC | 1 cut(s) | 202 |
| MboII | GAAGA | 1 cut(s) | 392 |
| MluCI | AATT | 5 cut(s) | 398, 405, 617, 690, 721 |
| MlyI | GAGTC | 1 cut(s) | 650 |
| MmeI | TCCRAC | 3 cut(s) | 333, 414, 657 |
| MnlI | CCTC | 9 cut(s) | 51, 57, 138, 184, 268, 519, 559, 664, 692 |
| MseI | TTAA | 3 cut(s) | 170, 183, 224 |
| MslI | CAYNNNNRTG | 1 cut(s) | 242 |
| MspI | CCGG | 1 cut(s) | 28 |
| Mva1269I | GAATGC | 2 cut(s) | 433, 509 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 104 |
| NdeII | GATC | 1 cut(s) | 202 |
| NlaIII | CATG | 4 cut(s) | 14, 241, 287, 304 |
| NlaIV | GGNNCC | 1 cut(s) | 585 |
| NmuCI | GTSAC | 2 cut(s) | 13, 232 |
| NspI | RCATGY | 1 cut(s) | 304 |
| PciI | ACATGT | 1 cut(s) | 300 |
| PctI | GAATGC | 2 cut(s) | 433, 509 |
| PfeI | GAWTC | 1 cut(s) | 503 |
| PkrI | GCNGC | 4 cut(s) | 106, 214, 289, 433 |
| PleI | GAGTC | 1 cut(s) | 649 |
| PpsI | GAGTC | 1 cut(s) | 649 |
| PscI | ACATGT | 1 cut(s) | 300 |
| PspN4I | GGNNCC | 1 cut(s) | 585 |
| PspPI | GGNCC | 1 cut(s) | 583 |
| PstNI | CAGNNNCTG | 1 cut(s) | 212 |
| RsaI | GTAC | 2 cut(s) | 162, 668 |
| RsaNI | GTAC | 2 cut(s) | 161, 667 |
| RseI | CAYNNNNRTG | 1 cut(s) | 242 |
| SaqAI | TTAA | 3 cut(s) | 170, 183, 224 |
| SatI | GCNGC | 4 cut(s) | 105, 213, 288, 432 |
| Sau3AI | GATC | 1 cut(s) | 202 |
| Sau96I | GGNCC | 1 cut(s) | 583 |
| SchI | GAGTC | 1 cut(s) | 650 |
| SetI | ASST | 7 cut(s) | 100, 176, 297, 376, 387, 440, 687 |
| SfcI | CTRYAG | 1 cut(s) | 375 |
| SinI | GGWCC | 1 cut(s) | 583 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 242 |
| Sse9I | AATT | 5 cut(s) | 398, 405, 617, 690, 721 |
| SsiI | CCGC | 1 cut(s) | 588 |
| SspMI | CTAG | 2 cut(s) | 255, 686 |
| TaaI | ACNGT | 1 cut(s) | 493 |
| TasI | AATT | 5 cut(s) | 398, 405, 617, 690, 721 |
| TatI | WGTACW | 1 cut(s) | 160 |
| TfiI | GAWTC | 1 cut(s) | 503 |
| Tru1I | TTAA | 3 cut(s) | 170, 183, 224 |
| Tru9I | TTAA | 3 cut(s) | 170, 183, 224 |
| TscAI | CASTG | 2 cut(s) | 213, 498 |
| TseFI | GTSAC | 2 cut(s) | 13, 232 |
| TseI | GCWGC | 4 cut(s) | 104, 212, 287, 431 |
| Tsp45I | GTSAC | 2 cut(s) | 13, 232 |
| TspDTI | ATGAA | 2 cut(s) | 17, 168 |
| TspRI | CASTG | 2 cut(s) | 213, 498 |
| VpaK11BI | GGWCC | 1 cut(s) | 583 |
| XapI | RAATTY | 3 cut(s) | 398, 405, 617 |
| XceI | RCATGY | 1 cut(s) | 304 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 655 |
| XmiI | GTMKAC | 1 cut(s) | 534 |
| XspI | CTAG | 2 cut(s) | 255, 686 |