Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 48 - 133 | 1.6e-27 | hAT family C-terminal dimerisation region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 5 |
| AclWI | GGATC | 1 cut(s) | 156 |
| AcsI | RAATTY | 1 cut(s) | 455 |
| AcuI | CTGAAG | 1 cut(s) | 438 |
| AfaI | GTAC | 2 cut(s) | 138, 270 |
| AgsI | TTSAA | 3 cut(s) | 51, 173, 281 |
| AluBI | AGCT | 2 cut(s) | 433, 470 |
| AluI | AGCT | 2 cut(s) | 433, 470 |
| Alw21I | GWGCWC | 2 cut(s) | 491, 564 |
| Alw44I | GTGCAC | 1 cut(s) | 560 |
| AlwI | GGATC | 1 cut(s) | 156 |
| AoxI | GGCC | 1 cut(s) | 16 |
| ApaLI | GTGCAC | 1 cut(s) | 560 |
| ApeKI | GCWGC | 3 cut(s) | 33, 54, 251 |
| ApoI | RAATTY | 1 cut(s) | 455 |
| AspLEI | GCGC | 1 cut(s) | 6 |
| AspS9I | GGNCC | 3 cut(s) | 17, 109, 230 |
| AvaII | GGWCC | 2 cut(s) | 109, 230 |
| BaeGI | GKGCMC | 2 cut(s) | 166, 564 |
| BauI | CACGAG | 1 cut(s) | 482 |
| Bbv12I | GWGCWC | 2 cut(s) | 491, 564 |
| BbvI | GCAGC | 3 cut(s) | 45, 66, 263 |
| BfaI | CTAG | 1 cut(s) | 498 |
| BisI | GCNGC | 3 cut(s) | 34, 55, 252 |
| BlsI | GCNGC | 3 cut(s) | 35, 56, 253 |
| Bme18I | GGWCC | 2 cut(s) | 109, 230 |
| BmgT120I | GGNCC | 3 cut(s) | 17, 109, 230 |
| BmrI | ACTGGG | 1 cut(s) | 509 |
| BmsI | GCATC | 1 cut(s) | 305 |
| BmuI | ACTGGG | 1 cut(s) | 509 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 151, 183 |
| BpmI | CTGGAG | 1 cut(s) | 339 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 312, 342 |
| Bse1I | ACTGG | 3 cut(s) | 150, 322, 515 |
| BseGI | GGATG | 2 cut(s) | 90, 284 |
| BseNI | ACTGG | 3 cut(s) | 150, 322, 515 |
| BseSI | GKGCMC | 2 cut(s) | 166, 564 |
| BseXI | GCAGC | 3 cut(s) | 45, 66, 263 |
| BshFI | GGCC | 1 cut(s) | 18 |
| BsiHKAI | GWGCWC | 2 cut(s) | 491, 564 |
| BsnI | GGCC | 1 cut(s) | 18 |
| Bsp1286I | GDGCHC | 3 cut(s) | 166, 491, 564 |
| Bsp143I | GATC | 1 cut(s) | 148 |
| BspANI | GGCC | 1 cut(s) | 18 |
| BspPI | GGATC | 1 cut(s) | 156 |
| BsrI | ACTGG | 3 cut(s) | 150, 322, 515 |
| BssMI | GATC | 1 cut(s) | 148 |
| BssSI | CACGAG | 1 cut(s) | 482 |
| Bst2BI | CACGAG | 1 cut(s) | 482 |
| Bst4CI | ACNGT | 1 cut(s) | 292 |
| BstC8I | GCNNGC | 2 cut(s) | 8, 386 |
| BstDEI | CTNAG | 1 cut(s) | 63 |
| BstF5I | GGATG | 2 cut(s) | 90, 284 |
| BstHHI | GCGC | 1 cut(s) | 6 |
| BstKTI | GATC | 1 cut(s) | 151 |
| BstMBI | GATC | 1 cut(s) | 148 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 257 |
| BstNSI | RCATGY | 2 cut(s) | 388, 513 |
| BstSLI | GKGCMC | 2 cut(s) | 166, 564 |
| BstV1I | GCAGC | 3 cut(s) | 45, 66, 263 |
| BsuRI | GGCC | 1 cut(s) | 18 |
| BtsCI | GGATG | 2 cut(s) | 90, 284 |
| BtsI | GCAGTG | 1 cut(s) | 135 |
| BtsIMutI | CAGTG | 3 cut(s) | 135, 315, 372 |
| Cac8I | GCNNGC | 2 cut(s) | 8, 386 |
| CfoI | GCGC | 1 cut(s) | 6 |
| Cfr13I | GGNCC | 3 cut(s) | 17, 109, 230 |
| Csp6I | GTAC | 2 cut(s) | 137, 269 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 537, 572 |
| CviAII | CATG | 3 cut(s) | 140, 385, 510 |
| CviJI | RGCY | 5 cut(s) | 18, 254, 433, 470, 554 |
| CviKI_1 | RGCY | 5 cut(s) | 18, 254, 433, 470, 554 |
| CviQI | GTAC | 2 cut(s) | 137, 269 |
| DdeI | CTNAG | 1 cut(s) | 63 |
| DpnI | GATC | 1 cut(s) | 150 |
| DpnII | GATC | 1 cut(s) | 148 |
| Eco47I | GGWCC | 2 cut(s) | 109, 230 |
| Eco57I | CTGAAG | 1 cut(s) | 438 |
| EcoO109I | RGGNCCY | 1 cut(s) | 17 |
| EcoRI | GAATTC | 1 cut(s) | 455 |
| FaeI | CATG | 3 cut(s) | 143, 388, 513 |
| FaiI | YATR | 7 cut(s) | 141, 206, 248, 257, 386, 462, 511 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 417, 449 |
| FatI | CATG | 3 cut(s) | 139, 384, 509 |
| Fnu4HI | GCNGC | 3 cut(s) | 34, 55, 252 |
| FokI | GGATG | 2 cut(s) | 97, 271 |
| Fsp4HI | GCNGC | 3 cut(s) | 34, 55, 252 |
| FspBI | CTAG | 1 cut(s) | 498 |
| FspI | TGCGCA | 1 cut(s) | 5 |
| GlaI | GCGC | 1 cut(s) | 5 |
| GluI | GCNGC | 3 cut(s) | 34, 55, 252 |
| GsuI | CTGGAG | 1 cut(s) | 339 |
| HaeIII | GGCC | 1 cut(s) | 18 |
| HhaI | GCGC | 1 cut(s) | 6 |
| Hin1II | CATG | 3 cut(s) | 143, 388, 513 |
| Hin6I | GCGC | 1 cut(s) | 4 |
| HinP1I | GCGC | 1 cut(s) | 4 |
| HinfI | GANTC | 2 cut(s) | 302, 355 |
| Hpy166II | GTNNAC | 1 cut(s) | 562 |
| Hpy188I | TCNGA | 3 cut(s) | 84, 186, 301 |
| Hpy188III | TCNNGA | 2 cut(s) | 170, 523 |
| Hpy8I | GTNNAC | 1 cut(s) | 562 |
| HpyAV | CCTTC | 2 cut(s) | 447, 526 |
| HpyCH4III | ACNGT | 1 cut(s) | 292 |
| HpyCH4IV | ACGT | 1 cut(s) | 494 |
| HpyCH4V | TGCA | 5 cut(s) | 296, 338, 384, 388, 562 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 257 |
| HpyF3I | CTNAG | 1 cut(s) | 63 |
| HpySE526I | ACGT | 1 cut(s) | 494 |
| Hsp92II | CATG | 3 cut(s) | 143, 388, 513 |
| HspAI | GCGC | 1 cut(s) | 4 |
| Kzo9I | GATC | 1 cut(s) | 148 |
| LpnPI | CCDG | 6 cut(s) | 43, 61, 131, 255, 303, 528 |
| Lsp1109I | GCAGC | 3 cut(s) | 45, 66, 263 |
| LweI | GCATC | 1 cut(s) | 305 |
| MaeI | CTAG | 1 cut(s) | 498 |
| MaeII | ACGT | 1 cut(s) | 494 |
| MalI | GATC | 1 cut(s) | 150 |
| MboI | GATC | 1 cut(s) | 148 |
| MboII | GAAGA | 4 cut(s) | 39, 199, 232, 437 |
| MfeI | CAATTG | 1 cut(s) | 94 |
| MhlI | GDGCHC | 3 cut(s) | 166, 491, 564 |
| MluCI | AATT | 7 cut(s) | 58, 94, 173, 391, 411, 455, 473 |
| MlyI | GAGTC | 2 cut(s) | 311, 349 |
| MmeI | TCCRAC | 1 cut(s) | 62 |
| MnlI | CCTC | 6 cut(s) | 8, 62, 118, 177, 314, 364 |
| MseI | TTAA | 2 cut(s) | 180, 360 |
| MunI | CAATTG | 1 cut(s) | 94 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 257 |
| NdeII | GATC | 1 cut(s) | 148 |
| NlaIII | CATG | 3 cut(s) | 143, 388, 513 |
| NsbI | TGCGCA | 1 cut(s) | 5 |
| NspI | RCATGY | 2 cut(s) | 388, 513 |
| PaeI | GCATGC | 1 cut(s) | 388 |
| PkrI | GCNGC | 3 cut(s) | 35, 56, 253 |
| PleI | GAGTC | 2 cut(s) | 310, 349 |
| PpsI | GAGTC | 2 cut(s) | 310, 349 |
| PspPI | GGNCC | 3 cut(s) | 17, 109, 230 |
| RsaI | GTAC | 2 cut(s) | 138, 270 |
| RsaNI | GTAC | 2 cut(s) | 137, 269 |
| SaqAI | TTAA | 2 cut(s) | 180, 360 |
| SatI | GCNGC | 3 cut(s) | 34, 55, 252 |
| Sau3AI | GATC | 1 cut(s) | 148 |
| Sau96I | GGNCC | 3 cut(s) | 17, 109, 230 |
| SchI | GAGTC | 2 cut(s) | 311, 349 |
| SduI | GDGCHC | 3 cut(s) | 166, 491, 564 |
| SetI | ASST | 6 cut(s) | 73, 325, 435, 472, 497, 567 |
| SfaNI | GCATC | 1 cut(s) | 305 |
| SinI | GGWCC | 2 cut(s) | 109, 230 |
| SphI | GCATGC | 1 cut(s) | 388 |
| Sse9I | AATT | 7 cut(s) | 58, 94, 173, 391, 411, 455, 473 |
| SspI | AATATT | 1 cut(s) | 155 |
| SspMI | CTAG | 1 cut(s) | 498 |
| TaaI | ACNGT | 1 cut(s) | 292 |
| TaiI | ACGT | 1 cut(s) | 497 |
| TaqI | TCGA | 3 cut(s) | 201, 524, 530 |
| TasI | AATT | 7 cut(s) | 58, 94, 173, 391, 411, 455, 473 |
| TatI | WGTACW | 1 cut(s) | 268 |
| Tru1I | TTAA | 2 cut(s) | 180, 360 |
| Tru9I | TTAA | 2 cut(s) | 180, 360 |
| TscAI | CASTG | 3 cut(s) | 135, 322, 372 |
| TseI | GCWGC | 3 cut(s) | 33, 54, 251 |
| TspDTI | ATGAA | 5 cut(s) | 156, 239, 339, 423, 477 |
| TspRI | CASTG | 3 cut(s) | 135, 322, 372 |
| VneI | GTGCAC | 1 cut(s) | 560 |
| VpaK11BI | GGWCC | 2 cut(s) | 109, 230 |
| XapI | RAATTY | 1 cut(s) | 455 |
| XceI | RCATGY | 2 cut(s) | 388, 513 |
| XspI | CTAG | 1 cut(s) | 498 |