Zinc finger BED domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 660 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 302 |
| AciI | CCGC | 1 cut(s) | 673 |
| AclWI | GGATC | 2 cut(s) | 258, 554 |
| AcuI | CTGAAG | 1 cut(s) | 198 |
| AfaI | GTAC | 3 cut(s) | 317, 358, 519 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 302 |
| AflIII | ACRYGT | 1 cut(s) | 657 |
| AgeI | ACCGGT | 1 cut(s) | 124 |
| AgsI | TTSAA | 4 cut(s) | 219, 446, 582, 664 |
| AjnI | CCWGG | 1 cut(s) | 295 |
| AluBI | AGCT | 3 cut(s) | 116, 134, 578 |
| AluI | AGCT | 3 cut(s) | 116, 134, 578 |
| AlwI | GGATC | 2 cut(s) | 258, 554 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 569 |
| ApeKI | GCWGC | 4 cut(s) | 569, 572, 575, 644 |
| AsiGI | ACCGGT | 1 cut(s) | 124 |
| AsuHPI | GGTGA | 1 cut(s) | 81 |
| BaeGI | GKGCMC | 1 cut(s) | 12 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 340, 372 |
| BbvI | GCAGC | 4 cut(s) | 556, 584, 587, 656 |
| BccI | CCATC | 1 cut(s) | 272 |
| BciT130I | CCWGG | 1 cut(s) | 297 |
| BfaI | CTAG | 2 cut(s) | 345, 612 |
| BfmI | CTRYAG | 1 cut(s) | 570 |
| BfuAI | ACCTGC | 1 cut(s) | 660 |
| BisI | GCNGC | 5 cut(s) | 570, 573, 576, 645, 674 |
| BlsI | GCNGC | 5 cut(s) | 571, 574, 577, 646, 675 |
| BmcAI | AGTACT | 1 cut(s) | 317 |
| Bme1390I | CCNGG | 1 cut(s) | 297 |
| BmiI | GGNNCC | 2 cut(s) | 70, 463 |
| BmrFI | CCNGG | 1 cut(s) | 297 |
| BsaWI | WCCGGW | 1 cut(s) | 124 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 302 |
| Bse118I | RCCGGY | 1 cut(s) | 124 |
| Bse1I | ACTGG | 3 cut(s) | 72, 114, 563 |
| Bse3DI | GCAATG | 2 cut(s) | 358, 395 |
| BseBI | CCWGG | 1 cut(s) | 297 |
| BseGI | GGATG | 1 cut(s) | 44 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 302 |
| BseMI | GCAATG | 2 cut(s) | 358, 395 |
| BseMII | CTCAG | 1 cut(s) | 338 |
| BseNI | ACTGG | 3 cut(s) | 72, 114, 563 |
| BseRI | GAGGAG | 1 cut(s) | 108 |
| BseSI | GKGCMC | 1 cut(s) | 12 |
| BseXI | GCAGC | 4 cut(s) | 556, 584, 587, 656 |
| BsgI | GTGCAG | 1 cut(s) | 638 |
| BshTI | ACCGGT | 1 cut(s) | 124 |
| BsiSI | CCGG | 2 cut(s) | 125, 394 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 302 |
| Bsp1286I | GDGCHC | 1 cut(s) | 12 |
| Bsp143I | GATC | 2 cut(s) | 250, 559 |
| BspACI | CCGC | 1 cut(s) | 673 |
| BspCNI | CTCAG | 1 cut(s) | 337 |
| BspLI | GGNNCC | 2 cut(s) | 70, 463 |
| BspMAI | CTGCAG | 1 cut(s) | 574 |
| BspMI | ACCTGC | 1 cut(s) | 660 |
| BspPI | GGATC | 2 cut(s) | 258, 554 |
| BsrDI | GCAATG | 2 cut(s) | 358, 395 |
| BsrFI | RCCGGY | 1 cut(s) | 124 |
| BsrI | ACTGG | 3 cut(s) | 72, 114, 563 |
| BssAI | RCCGGY | 1 cut(s) | 124 |
| BssMI | GATC | 2 cut(s) | 250, 559 |
| Bst2UI | CCWGG | 1 cut(s) | 297 |
| Bst4CI | ACNGT | 2 cut(s) | 153, 537 |
| Bst6I | CTCTTC | 1 cut(s) | 168 |
| BstC8I | GCNNGC | 2 cut(s) | 61, 337 |
| BstDEI | CTNAG | 1 cut(s) | 324 |
| BstF5I | GGATG | 1 cut(s) | 44 |
| BstKTI | GATC | 2 cut(s) | 253, 562 |
| BstMBI | GATC | 2 cut(s) | 250, 559 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 575 |
| BstNI | CCWGG | 1 cut(s) | 297 |
| BstNSI | RCATGY | 1 cut(s) | 661 |
| BstSCI | CCNGG | 1 cut(s) | 295 |
| BstSFI | CTRYAG | 1 cut(s) | 570 |
| BstSLI | GKGCMC | 1 cut(s) | 12 |
| BstV1I | GCAGC | 4 cut(s) | 556, 584, 587, 656 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 601 |
| BtsCI | GGATG | 1 cut(s) | 44 |
| BtsIMutI | CAGTG | 5 cut(s) | 14, 107, 149, 533, 570 |
| BveI | ACCTGC | 1 cut(s) | 660 |
| Cac8I | GCNNGC | 2 cut(s) | 61, 337 |
| CaiI | CAGNNNCTG | 1 cut(s) | 569 |
| Cfr10I | RCCGGY | 1 cut(s) | 124 |
| Csp6I | GTAC | 3 cut(s) | 316, 357, 518 |
| CspAI | ACCGGT | 1 cut(s) | 124 |
| CviAII | CATG | 5 cut(s) | 302, 377, 595, 641, 658 |
| CviJI | RGCY | 8 cut(s) | 116, 134, 213, 295, 464, 569, 578, 610 |
| CviKI_1 | RGCY | 8 cut(s) | 116, 134, 213, 295, 464, 569, 578, 610 |
| CviQI | GTAC | 3 cut(s) | 316, 357, 518 |
| DdeI | CTNAG | 1 cut(s) | 324 |
| DpnI | GATC | 2 cut(s) | 252, 561 |
| DpnII | GATC | 2 cut(s) | 250, 559 |
| Eam1104I | CTCTTC | 1 cut(s) | 168 |
| EarI | CTCTTC | 1 cut(s) | 168 |
| Eco57I | CTGAAG | 1 cut(s) | 198 |
| EcoRII | CCWGG | 1 cut(s) | 295 |
| FaeI | CATG | 5 cut(s) | 305, 380, 598, 644, 661 |
| FatI | CATG | 5 cut(s) | 301, 376, 594, 640, 657 |
| Fnu4HI | GCNGC | 5 cut(s) | 570, 573, 576, 645, 674 |
| FokI | GGATG | 1 cut(s) | 31 |
| Fsp4HI | GCNGC | 5 cut(s) | 570, 573, 576, 645, 674 |
| FspBI | CTAG | 2 cut(s) | 345, 612 |
| GluI | GCNGC | 5 cut(s) | 570, 573, 576, 645, 674 |
| HapII | CCGG | 2 cut(s) | 125, 394 |
| Hin1II | CATG | 5 cut(s) | 305, 380, 598, 644, 661 |
| HinfI | GANTC | 2 cut(s) | 94, 341 |
| HpaII | CCGG | 2 cut(s) | 125, 394 |
| HphI | GGTGA | 1 cut(s) | 81 |
| Hpy188I | TCNGA | 1 cut(s) | 327 |
| Hpy188III | TCNNGA | 4 cut(s) | 176, 262, 345, 700 |
| HpyAV | CCTTC | 7 cut(s) | 43, 63, 96, 203, 364, 451, 478 |
| HpyCH4III | ACNGT | 2 cut(s) | 153, 537 |
| HpyCH4V | TGCA | 7 cut(s) | 59, 388, 494, 551, 572, 644, 655 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 575 |
| HpyF3I | CTNAG | 1 cut(s) | 324 |
| Hsp92II | CATG | 5 cut(s) | 305, 380, 598, 644, 661 |
| Kzo9I | GATC | 2 cut(s) | 250, 559 |
| LmnI | GCTCC | 3 cut(s) | 121, 417, 461 |
| Lsp1109I | GCAGC | 4 cut(s) | 556, 584, 587, 656 |
| MaeI | CTAG | 2 cut(s) | 345, 612 |
| MaeIII | GTNAC | 2 cut(s) | 379, 589 |
| MalI | GATC | 2 cut(s) | 252, 561 |
| MboI | GATC | 2 cut(s) | 250, 559 |
| MfeI | CAATTG | 1 cut(s) | 450 |
| MhlI | GDGCHC | 1 cut(s) | 12 |
| MluCI | AATT | 2 cut(s) | 450, 541 |
| MlyI | GAGTC | 2 cut(s) | 103, 335 |
| MmeI | TCCRAC | 1 cut(s) | 690 |
| MseI | TTAA | 2 cut(s) | 527, 540 |
| MslI | CAYNNNNRTG | 1 cut(s) | 599 |
| MspI | CCGG | 2 cut(s) | 125, 394 |
| MspR9I | CCNGG | 1 cut(s) | 297 |
| MunI | CAATTG | 1 cut(s) | 450 |
| MvaI | CCWGG | 1 cut(s) | 297 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 575 |
| NdeII | GATC | 2 cut(s) | 250, 559 |
| NlaIII | CATG | 5 cut(s) | 305, 380, 598, 644, 661 |
| NlaIV | GGNNCC | 2 cut(s) | 70, 463 |
| NmuCI | GTSAC | 2 cut(s) | 379, 589 |
| NspI | RCATGY | 1 cut(s) | 661 |
| PciI | ACATGT | 1 cut(s) | 657 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 302 |
| PinAI | ACCGGT | 1 cut(s) | 124 |
| PkrI | GCNGC | 5 cut(s) | 571, 574, 577, 646, 675 |
| PleI | GAGTC | 2 cut(s) | 102, 335 |
| PpsI | GAGTC | 2 cut(s) | 102, 335 |
| PscI | ACATGT | 1 cut(s) | 657 |
| Psp6I | CCWGG | 1 cut(s) | 295 |
| PspGI | CCWGG | 1 cut(s) | 295 |
| PspN4I | GGNNCC | 2 cut(s) | 70, 463 |
| PstI | CTGCAG | 1 cut(s) | 574 |
| PstNI | CAGNNNCTG | 1 cut(s) | 569 |
| RsaI | GTAC | 3 cut(s) | 317, 358, 519 |
| RsaNI | GTAC | 3 cut(s) | 316, 357, 518 |
| RseI | CAYNNNNRTG | 1 cut(s) | 599 |
| SaqAI | TTAA | 2 cut(s) | 527, 540 |
| SatI | GCNGC | 5 cut(s) | 570, 573, 576, 645, 674 |
| Sau3AI | GATC | 2 cut(s) | 250, 559 |
| ScaI | AGTACT | 1 cut(s) | 317 |
| SchI | GAGTC | 2 cut(s) | 103, 335 |
| ScrFI | CCNGG | 1 cut(s) | 297 |
| SduI | GDGCHC | 1 cut(s) | 12 |
| SetI | ASST | 8 cut(s) | 106, 118, 136, 163, 301, 533, 580, 654 |
| SfcI | CTRYAG | 1 cut(s) | 570 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 599 |
| Sse9I | AATT | 2 cut(s) | 450, 541 |
| SsiI | CCGC | 1 cut(s) | 673 |
| SspMI | CTAG | 2 cut(s) | 345, 612 |
| StyD4I | CCNGG | 1 cut(s) | 295 |
| TaaI | ACNGT | 2 cut(s) | 153, 537 |
| TaqI | TCGA | 1 cut(s) | 76 |
| TasI | AATT | 2 cut(s) | 450, 541 |
| TatI | WGTACW | 1 cut(s) | 315 |
| TauI | GCSGC | 1 cut(s) | 676 |
| Tru1I | TTAA | 2 cut(s) | 527, 540 |
| Tru9I | TTAA | 2 cut(s) | 527, 540 |
| TscAI | CASTG | 5 cut(s) | 21, 114, 156, 540, 570 |
| TseFI | GTSAC | 2 cut(s) | 379, 589 |
| TseI | GCWGC | 4 cut(s) | 569, 572, 575, 644 |
| Tsp45I | GTSAC | 2 cut(s) | 379, 589 |
| TspDTI | ATGAA | 2 cut(s) | 383, 525 |
| TspRI | CASTG | 5 cut(s) | 21, 114, 156, 540, 570 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 302 |
| XbaI | TCTAGA | 1 cut(s) | 344 |
| XceI | RCATGY | 1 cut(s) | 661 |
| XspI | CTAG | 2 cut(s) | 345, 612 |
| ZrmI | AGTACT | 1 cut(s) | 317 |