Rorug07G0283300

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
27494502 .. 27504904
10403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0283300.1

Sequence Viewer

Length: 3804 bp
ATGGCGTGTGCAACTCCGGGAGCAAACCCTAAAAGCTCATCGAAAAGCTCGTACCGCATCGGAGGCATCGATGTGGAGTTCCCGTACCAGCCGTACGCGGCGCAGATGGCGTTCATGAGCAGAGTCGTCTCCACTCTCGATCGAGCTGTCAGGGACGACCACTGCCACGCCTTGCTCGAGTCTCCCACCGGAACCGGCAAATCCCTCTCTCTTCTCTGCTCCATCCTCGCCTGGCAGCAGAGCTTCAAGGCCAAGAATATGTACGCCAATCTCTCCCATTCCAAGCCCAACCCCAAGGCCATGACCGATCCCATCGCCCACGGCGGCGGCTTTGTTCCAGAAGAGGAGCACTTGAGTGCTCAGCCATCGGAAAAGCCAGTGCCGTCTCAATCTGAAAATCGGAAGAAAAAGGCAGCTCCTACCATATACTATGCATCGAGGACACATTCACAAATTTCTCAAGTCATCCGTGAATATCGGAAAACTTCCTATCGGGTGCCTATGGCAGTGCTGGCCTCTAGGAAGCATTACTGCACAAATGCACAAGTACATGGGAGAGAGAATATTGACGAAGAATGTAAGCTTCTTTTGAAGGATCGAGTGGTTGGATGCGTAGAATTTAAAAACGTACACAAAGTCAAAGGACATCCATCTCTTCAGAAAGGAGGCTGCCACGAGGCCTACGATATTGAGGATCTCGTGAAAGTTGGAAAAGTTGTCAAAGGTTGTTCATATTATGCCGCTCGTTCTATGTCAGACGATGCAGAACTGGTTTTTTGTCCATATAACTACATCATTAATCCAGTCATTAGGGGAGCCATGGAAGTAGATATTCAGGGGTCCATTGTAGTTCTGGATGAAGCCCACAATATAGAGGATGTTGCTCGCGATGCTGGTAGTGTAGATATTGATGAAGAAGTTTTGAACAAATTGCAGATGGAACTAGAGCAGCTTTGCCCGCTGGATGTTTTGGTTTACCAACCTCTATATGAAATGATACAGGACCTCTTAAGTTGGATTGAGCGAAGGAAAGATAAGTTAGAAAAGCGTGAATTTCAGCACTTTGTGTCTTGTTGGACTGGTGACAAGGCTTTGAGAGAGCTTCAGGAAGCTAATATATCACAGCAGTGCTTCCCAGTCTTACTTGAATGTGCCACAAAGGCAATCAAAGCTGCTACAGATAAAGAATCAGAGGTAGCCCATTTAAGTGGCATGGCTGTTGTGACATTGGAAGGATTGTTCTCTTCGCTTACTTACTTCTTCTCAAGAAATGGGTCTCATATGGTCGATTATCAGCTTGCTTTACAGAGATATGTTAAAAGAGACGTTGGAACTTTTGGCGATTGGACACATACATTCAGTTTGTGGTGCTTGAATCCTGCTGTTGTGTTTCAAGATATTGCCAATCTTTCCTTGTCAGTCATTTTAACATCGGGGACTTTGTCACCAATGAATTCCTTTTCATCTGAGCTTGGCCTTCAGTTTGGAAGTACTCTGGAAGCTCCCCATGTAATTGATGTTGAATCACAGGTTTGGCCCACTATTATTTCTACTGGCCCAGGTAATGTGCCATTGAATGCAAGTTATAAGACAGCAGATGAATATTCCTTCCAGGATGCACTTGGAAAATCCTTAGAGGAAATTTTCAAAAGTGTGCCGGGTGGGTGTCTAGTGTTCTTCCCAAGTTACAAGCTAATGGGGAAGTTATGCAAGCGTTGGCGTGAAACAGGACAATGGTCTCTGCTAAACGAAAGAAAGTCCCTTTTTGTTGAGCCCGGTGGAGACCAGGAGGAATTTGAGTTTGTACTGAAGGGTTATTATGATTCAATTCGTCGGGGCAATAAACCTGCTTTTGGGAGAAATAAAGGTGCTAACAAGAAATTAAGACAAAGTAGCTTCACTGCAGTCAAGTGTGCACAAAAGAATAACACTGATGGAGCTGCTTTACTGGCTGTGTGCCGAGGAAAGGTTTCAGAAGGAATCGACTTCACAGATGACAATGCTCGGGCTGTGATAATTGTGGGAATTCCATTTCCCAACATGAATGACATTAAGATTTCCTTAAAGAAGAAATACAATGATGCATATAAGTCATCCAAGGGCTTTCTGAGTGGAAATGAATGGTACTGTCACCAAGCCTTCCGAGCTTTAAATCAAGCTGCAGGACGTTGTATTCGACATAGGTTTGATTATGGAGCTGTCATCTTATTAGATGAACGTTATCAGGTAGGAAGAAATACAGCATATGTGTCAAAGTGGCTAAAGAAATCCATTAGACAGTATGAAAGCTTTGACACGTCAATAGAGGAATTAAAATCCTTTTTCAACAATGTCAAGGAAAGGGTAAGCAAGAATATGGTCAATGTGTCACAGAGTTCTGACACTAGAGAGAAAATCATTCTTTCTATGGATCACAGTAAAGGGTTTACAAGACTGAAAGATCAGAATTTGAATAAATCTGATCCTCAGGGACAGACAAAAACTTATGTAGGCAAGCACGATTCTCTACTGACATCTCAAGATGATCTTGATGTATCATCACGAATGGATGTATATGCTGACAATAGCAAGGACTTTATCAATATCAGATCTACTCCTCAGAAAGATACAAGGTACCTTAAGCCATCTTTGTCCATGTCATTCTCTGATGCAGATCCAGACATCTCAGTTGTCAATGAAACCCCTTGTACGGACGGCATCTTTTCCACGTGCAGTCCAGGATCAATTACTAAGGATGAGAAGTGCTGTTCGACTTCGACTACAATTGAGTCCTCTTCTTTCTTTTCGGACCAATTCTCATTCCAATCAACATCCTTAACCAATTGTAGCAAGGCTTCTCCAAAGGGGCAGTGTTCTGTAGCCGCTACTCCTGAAAAGAATGCAACTTTGAACTCTTACAGCTCAATGACAGAAACAGAATCATCTTTGGATTTGAGTGTTAATTCTCATATCCAGAAAAGGAGAAAGTCCATGTATCAATCCTTGGTTAACTCCAGTCAGGGACAGTCTGGTGGTGCTCCTGATTCTGAAACTCTTGATTGTCCTGGTTCCGTAAAAGAGGCAATGACCAGTGGAGATGCCATTCGCAAAATTGAATTTAGTGAATCTAATTATTCAGAGCACTATTGTAAGTCCATAGTTCATCATCTTCCCCCGAGTACTTGTGGCACTTCATCTGTGTCAGTTGGTTCTGTCATGGACAAGAGACTAGAAATCTGTTGCTCACTCTGCAAAAGCCCATTGGGCCTTCCTGAGAATAATCTACATGTTACATGCTCAATAACTTCATCATCGAAACTTTACTTGGAATCTCTTCATAACGAAATATTGAAATCTCAAACTGGGAATACATCAGCAGGCATACGTGTTCTCATAACTGACATTTCATCAGTTGATTATCGAGTCTGCCATGAAATTTCTGAAGGCACTCCTGGACAGGGTGTATGGTGTGAAAAAGATGGGTTTGTTTTCGGTACCATCTTGTGCCCCTTTTGTCGTCACCACAAGAGTAGCCACGATAATTTCCTTGGCGTACAGGTCATGGCAACTAATGCATCAAATGTTCATTTACTCAACAAGATCATGTTTTACTTAGATCAGTTGGAAATTACAAATTTTGAGGCATCTTCTGACAGGGCTACAAAAGACAAAGATTTCTTGCCTGTTAATGGTTCCAACGTCGACAAAGTTGCCATTCTCAATCCCTTTGATAAATTCTCGTACTCTCCAGTACAGCAGGACCAAGGAGGATGGAGGACTACAAAATCAAAGCTTAAACTACCCAAAAGACCCTCACGTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1267

Amino Acids

140.88

Weight (kDa)

7.45

Isoelectric Point (pI)

45.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD_2 PF06733 144 - 307 3.3e-44 DEAD_2
Helicase_C_2 PF13307 546 - 756 1.1e-51 Helicase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1587
Acc36I ACCTGC 1 cut(s) 1855
Acc65I GGTACC 2 cut(s) 2613, 3473
AccB1I GGYRCC 3 cut(s) 496, 2613, 3473
AccBSI CCGCTC 1 cut(s) 743
AccI GTMKAC 1 cut(s) 3681
AccII CGCG 2 cut(s) 98, 888
AciI CCGC 7 cut(s) 55, 98, 324, 327, 741, 959, 2862
AclI AACGTT 1 cut(s) 2218
AclWI GGATC 7 cut(s) 302, 603, 702, 2418, 2456, 2648, 2728
AcuI CTGAAG 5 cut(s) 641, 1088, 1463, 1829, 3441
AcvI CACGTG 1 cut(s) 2709
AdeI CACNNNGTG 1 cut(s) 1066
AfiI CCNNNNNNNGG 5 cut(s) 1853, 1966, 2689, 3437, 3668
AflII CTTAAG 2 cut(s) 1009, 2618
AflIII ACRYGT 3 cut(s) 2295, 3265, 3364
AjiI CACGTC 1 cut(s) 2298
AjnI CCWGG 7 cut(s) 230, 1558, 1611, 1785, 2716, 3043, 3430
AjuI GAANNNNNNNTTGG 2 cut(s) 3287, 3319
AleI CACNNNNGTG 2 cut(s) 354, 1126
AloI GAACNNNNNNTCC 2 cut(s) 1223, 1255
Alw21I GWGCWC 5 cut(s) 351, 361, 1918, 3019, 3123
Alw26I GTCTC 8 cut(s) 133, 186, 390, 1281, 1317, 1743, 1776, 3199
Alw44I GTGCAC 1 cut(s) 1914
AlwI GGATC 7 cut(s) 302, 603, 702, 2418, 2456, 2648, 2728
Ama87I CYCGRG 3 cut(s) 176, 2004, 3154
AoxI GGCC 8 cut(s) 249, 297, 513, 678, 1474, 1535, 1555, 3244
ApaLI GTGCAC 1 cut(s) 1914
ApeKI GCWGC 7 cut(s) 235, 413, 669, 949, 1172, 1940, 2159
ArsI GACNNNNNNTTYG 2 cut(s) 2157, 2189
AseI ATTAAT 1 cut(s) 798
Asp700I GAANNNNTTC 2 cut(s) 1969, 3312
Asp718I GGTACC 2 cut(s) 2613, 3473
AspLEI GCGC 1 cut(s) 103
AspS9I GGNCC 7 cut(s) 840, 1003, 1536, 1556, 2788, 3244, 3739
AsuC2I CCSGG 3 cut(s) 18, 1659, 1776
AsuHPI GGTGA 4 cut(s) 1094, 1437, 2123, 3491
AvaI CYCGRG 3 cut(s) 176, 2004, 3154
AvaII GGWCC 4 cut(s) 840, 1003, 2788, 3739
AxyI CCTNAGG 1 cut(s) 2466
BaeGI GKGCMC 2 cut(s) 1918, 3488
BanI GGYRCC 3 cut(s) 496, 2613, 3473
BanII GRGCYC 1 cut(s) 1776
BarI GAAGNNNNNNTAC 2 cut(s) 2818, 2850
BauI CACGAG 2 cut(s) 674, 698
BbrPI CACGTG 1 cut(s) 2709
Bbv12I GWGCWC 5 cut(s) 351, 361, 1918, 3019, 3123
BbvI GCAGC 7 cut(s) 247, 425, 656, 961, 1159, 1927, 2146
BceAI ACGGC 4 cut(s) 76, 337, 367, 2710
BcgI CGANNNNNNTGC 2 cut(s) 3671, 3705
BciT130I CCWGG 7 cut(s) 232, 1560, 1613, 1787, 2718, 3045, 3432
BcnI CCSGG 3 cut(s) 18, 1659, 1776
BcoDI GTCTC 8 cut(s) 133, 186, 390, 1281, 1317, 1743, 1776, 3199
BfaI CTAG 5 cut(s) 519, 944, 1670, 2385, 3209
BfmI CTRYAG 4 cut(s) 1176, 1902, 2160, 2856
BfrI CTTAAG 2 cut(s) 1009, 2618
BfuAI ACCTGC 1 cut(s) 1855
BglI GCCNNNNNGGC 2 cut(s) 1160, 3243
BglII AGATCT 1 cut(s) 2588
BlpI GCTNAGC 1 cut(s) 360
BmcAI AGTACT 2 cut(s) 1492, 3160
Bme18I GGWCC 4 cut(s) 840, 1003, 2788, 3739
BmeT110I CYCGRG 3 cut(s) 176, 2004, 3154
BmgBI CACGTC 1 cut(s) 2298
BmgT120I GGNCC 7 cut(s) 840, 1003, 1536, 1556, 2788, 3244, 3739
BmiI GGNNCC 8 cut(s) 193, 498, 817, 841, 2615, 3049, 3475, 3673
BmrI ACTGGG 2 cut(s) 1130, 3351
BmuI ACTGGG 2 cut(s) 1130, 3351
BoxI GACNNNNGTC 1 cut(s) 1735
BpmI CTGGAG 2 cut(s) 2977, 3711
Bpu1102I GCTNAGC 1 cut(s) 360
BpuEI CTTGAG 4 cut(s) 373, 444, 1249, 2502
BpuMI CCSGG 3 cut(s) 18, 1659, 1776
Bsa29I ATCGAT 1 cut(s) 69
BsaAI YACGTR 2 cut(s) 2709, 3365
BsaBI GATNNNNATC 1 cut(s) 2652
BsaI GGTCTC 3 cut(s) 1281, 1743, 1776
BsaJI CCNNGG 9 cut(s) 294, 319, 819, 1558, 1960, 2097, 2982, 3526, 3742
BsaWI WCCGGW 1 cut(s) 188
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 5 cut(s) 1853, 1966, 2689, 3437, 3668
Bse118I RCCGGY 1 cut(s) 194
Bse21I CCTNAGG 1 cut(s) 2466
Bse3DI GCAATG 1 cut(s) 3069
Bse8I GATNNNNATC 1 cut(s) 2652
BseBI CCWGG 7 cut(s) 232, 1560, 1613, 1787, 2718, 3045, 3432
BseCI ATCGAT 1 cut(s) 69
BseDI CCNNGG 9 cut(s) 294, 319, 819, 1558, 1960, 2097, 2982, 3526, 3742
BseJI GATNNNNATC 1 cut(s) 2652
BseLI CCNNNNNNNGG 5 cut(s) 1853, 1966, 2689, 3437, 3668
BseMI GCAATG 1 cut(s) 3069
BseMII CTCAG 7 cut(s) 374, 1458, 2099, 2480, 2612, 2679, 3243
BseRI GAGGAG 2 cut(s) 359, 2586
BseSI GKGCMC 2 cut(s) 1918, 3488
BseXI GCAGC 7 cut(s) 247, 425, 656, 961, 1159, 1927, 2146
BsgI GTGCAG 2 cut(s) 517, 2731
Bsh1236I CGCG 2 cut(s) 98, 888
Bsh1285I CGRYCG 1 cut(s) 142
BshFI GGCC 8 cut(s) 251, 299, 515, 680, 1476, 1537, 1557, 3246
BshNI GGYRCC 3 cut(s) 496, 2613, 3473
BshVI ATCGAT 1 cut(s) 69
BsiEI CGRYCG 1 cut(s) 142
BsiHKAI GWGCWC 5 cut(s) 351, 361, 1918, 3019, 3123
BsiHKCI CYCGRG 3 cut(s) 176, 2004, 3154
BsiSI CCGG 5 cut(s) 17, 189, 195, 1658, 1776
BsiWI CGTACG 1 cut(s) 93
BslFI GGGAC 5 cut(s) 167, 1450, 1744, 2484, 3015
BslI CCNNNNNNNGG 5 cut(s) 1853, 1966, 2689, 3437, 3668
BsmAI GTCTC 8 cut(s) 133, 186, 390, 1281, 1317, 1743, 1776, 3199
BsmBI CGTCTC 3 cut(s) 133, 390, 1317
BsmFI GGGAC 5 cut(s) 167, 1450, 1744, 2484, 3015
BsmI GAATGC 2 cut(s) 1582, 2884
BsnI GGCC 8 cut(s) 251, 299, 515, 680, 1476, 1537, 1557, 3246
Bso31I GGTCTC 3 cut(s) 1281, 1743, 1776
BsoBI CYCGRG 3 cut(s) 176, 2004, 3154
Bsp1286I GDGCHC 7 cut(s) 351, 361, 1776, 1918, 3019, 3123, 3488
Bsp1720I GCTNAGC 1 cut(s) 360
Bsp19I CCATGG 1 cut(s) 819
Bsp68I TCGCGA 1 cut(s) 888
BspACI CCGC 7 cut(s) 55, 98, 324, 327, 741, 959, 2862
BspANI GGCC 8 cut(s) 251, 299, 515, 680, 1476, 1537, 1557, 3246
BspCNI CTCAG 7 cut(s) 373, 1459, 2100, 2479, 2611, 2678, 3244
BspDI ATCGAT 1 cut(s) 69
BspFNI CGCG 2 cut(s) 98, 888
BspHI TCATGA 1 cut(s) 114
BspLI GGNNCC 8 cut(s) 193, 498, 817, 841, 2615, 3049, 3475, 3673
BspMAI CTGCAG 2 cut(s) 1906, 2164
BspMI ACCTGC 1 cut(s) 1855
BspPI GGATC 7 cut(s) 302, 603, 702, 2418, 2456, 2648, 2728
BspT107I GGYRCC 3 cut(s) 496, 2613, 3473
BspTI CTTAAG 2 cut(s) 1009, 2618
BspTNI GGTCTC 3 cut(s) 1281, 1743, 1776
BsrBI CCGCTC 1 cut(s) 743
BsrDI GCAATG 1 cut(s) 3069
BsrFI RCCGGY 1 cut(s) 194
BssAI RCCGGY 1 cut(s) 194
BssECI CCNNGG 9 cut(s) 294, 319, 819, 1558, 1960, 2097, 2982, 3526, 3742
BssSI CACGAG 2 cut(s) 674, 698
BssT1I CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
Bst2BI CACGAG 2 cut(s) 674, 698
Bst2UI CCWGG 7 cut(s) 232, 1560, 1613, 1787, 2718, 3045, 3432
Bst4CI ACNGT 4 cut(s) 2129, 2280, 2417, 3006
Bst6I CTCTTC 6 cut(s) 216, 336, 660, 1249, 2779, 3318
BstAFI CTTAAG 2 cut(s) 1009, 2618
BstAPI GCANNNNNTGC 1 cut(s) 3551
BstBAI YACGTR 2 cut(s) 2709, 3365
BstC8I GCNNGC 7 cut(s) 513, 886, 959, 1299, 1712, 2495, 3358
BstDSI CCRYGG 2 cut(s) 319, 819
BstFNI CGCG 2 cut(s) 98, 888
BstHHI GCGC 1 cut(s) 103
BstMAI GTCTC 8 cut(s) 133, 186, 390, 1281, 1317, 1743, 1776, 3199
BstMCI CGRYCG 1 cut(s) 142
BstNI CCWGG 7 cut(s) 232, 1560, 1613, 1787, 2718, 3045, 3432
BstNSI RCATGY 2 cut(s) 3269, 3276
BstPAI GACNNNNGTC 1 cut(s) 1735
BstSFI CTRYAG 4 cut(s) 1176, 1902, 2160, 2856
BstSLI GKGCMC 2 cut(s) 1918, 3488
BstUI CGCG 2 cut(s) 98, 888
BstV1I GCAGC 7 cut(s) 247, 425, 656, 961, 1159, 1927, 2146
BstX2I RGATCY 3 cut(s) 694, 2588, 2653
BstXI CCANNNNNNTGG 1 cut(s) 1208
BstYI RGATCY 3 cut(s) 694, 2588, 2653
Bsu15I ATCGAT 1 cut(s) 69
Bsu36I CCTNAGG 1 cut(s) 2466
BsuRI GGCC 8 cut(s) 251, 299, 515, 680, 1476, 1537, 1557, 3246
BsuTUI ATCGAT 1 cut(s) 69
BtgI CCRYGG 2 cut(s) 319, 819
BtgZI GCGATG 2 cut(s) 298, 903
BtrI CACGTC 1 cut(s) 2298
BtsI GCAGTG 5 cut(s) 160, 513, 1133, 1899, 2855
BtsIMutI CAGTG 8 cut(s) 160, 384, 513, 1133, 1899, 1929, 2855, 3076
BtuMI TCGCGA 1 cut(s) 888
BveI ACCTGC 1 cut(s) 1855
Cac8I GCNNGC 7 cut(s) 513, 886, 959, 1299, 1712, 2495, 3358
CciI TCATGA 1 cut(s) 114
CfoI GCGC 1 cut(s) 103
Cfr10I RCCGGY 1 cut(s) 194
Cfr13I GGNCC 7 cut(s) 840, 1003, 1536, 1556, 2788, 3244, 3739
ClaI ATCGAT 1 cut(s) 69
DraI TTTAAA 2 cut(s) 622, 2151
DraIII CACNNNGTG 1 cut(s) 1066
Eam1104I CTCTTC 6 cut(s) 216, 336, 660, 1249, 2779, 3318
EarI CTCTTC 6 cut(s) 216, 336, 660, 1249, 2779, 3318
Eco130I CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
Eco147I AGGCCT 1 cut(s) 680
Eco24I GRGCYC 1 cut(s) 1776
Eco31I GGTCTC 3 cut(s) 1281, 1743, 1776
Eco47I GGWCC 4 cut(s) 840, 1003, 2788, 3739
Eco57I CTGAAG 5 cut(s) 641, 1088, 1463, 1829, 3441
Eco72I CACGTG 1 cut(s) 2709
Eco81I CCTNAGG 1 cut(s) 2466
Eco88I CYCGRG 3 cut(s) 176, 2004, 3154
EcoO109I RGGNCCY 1 cut(s) 1003
EcoRI GAATTC 2 cut(s) 1453, 2025
EcoRII CCWGG 7 cut(s) 230, 1558, 1611, 1785, 2716, 3043, 3430
EcoT14I CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
EcoT22I ATGCAT 3 cut(s) 436, 2086, 3556
EcoT38I GRGCYC 1 cut(s) 1776
ErhI CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
Esp3I CGTCTC 3 cut(s) 133, 390, 1317
FalI AAGNNNNNCTT 4 cut(s) 2045, 2077, 2511, 2543
FaqI GGGAC 5 cut(s) 167, 1450, 1744, 2484, 3015
FauI CCCGC 1 cut(s) 966
FauNDI CATATG 2 cut(s) 1281, 2245
FblI GTMKAC 1 cut(s) 3681
FriOI GRGCYC 1 cut(s) 1776
FspBI CTAG 5 cut(s) 519, 944, 1670, 2385, 3209
GlaI GCGC 1 cut(s) 102
GsuI CTGGAG 2 cut(s) 2977, 3711
HaeIII GGCC 8 cut(s) 251, 299, 515, 680, 1476, 1537, 1557, 3246
HapII CCGG 5 cut(s) 17, 189, 195, 1658, 1776
HhaI GCGC 1 cut(s) 103
Hin6I GCGC 1 cut(s) 101
HinP1I GCGC 1 cut(s) 101
HincII GTYRAC 2 cut(s) 2989, 3682
HindII GTYRAC 2 cut(s) 2989, 3682
HindIII AAGCTT 3 cut(s) 581, 2287, 3770
HpaI GTTAAC 1 cut(s) 2989
HpaII CCGG 5 cut(s) 17, 189, 195, 1658, 1776
HphI GGTGA 4 cut(s) 1094, 1437, 2123, 3491
Hpy166II GTNNAC 6 cut(s) 631, 976, 1916, 2427, 2989, 3682
Hpy8I GTNNAC 6 cut(s) 631, 976, 1916, 2427, 2989, 3682
Hpy99I CGWCG 2 cut(s) 1836, 3683
HpyCH4III ACNGT 4 cut(s) 2129, 2280, 2417, 3006
HpyCH4IV ACGT 9 cut(s) 627, 1326, 2167, 2218, 2297, 2708, 3364, 3678, 3796
HpySE526I ACGT 9 cut(s) 627, 1326, 2167, 2218, 2297, 2708, 3364, 3678, 3796
HspAI GCGC 1 cut(s) 101
KpnI GGTACC 2 cut(s) 2617, 3477
KspAI GTTAAC 1 cut(s) 2989
LmnI GCTCC 9 cut(s) 20, 224, 346, 421, 815, 1507, 1937, 2195, 3022
Lsp1109I GCAGC 7 cut(s) 247, 425, 656, 961, 1159, 1927, 2146
MaeI CTAG 5 cut(s) 519, 944, 1670, 2385, 3209
MaeII ACGT 9 cut(s) 627, 1326, 2167, 2218, 2297, 2708, 3364, 3678, 3796
MaeIII GTNAC 8 cut(s) 1082, 1222, 1443, 1685, 2129, 2367, 3268, 3497
MbiI CCGCTC 1 cut(s) 743
MfeI CAATTG 2 cut(s) 2763, 2821
MflI RGATCY 3 cut(s) 694, 2588, 2653
MhlI GDGCHC 7 cut(s) 351, 361, 1776, 1918, 3019, 3123, 3488
MlyI GAGTC 4 cut(s) 132, 188, 2777, 3411
MmeI TCCRAC 7 cut(s) 586, 688, 995, 1055, 1309, 3582, 3699
Mph1103I ATGCAT 3 cut(s) 436, 2086, 3556
MroXI GAANNNNTTC 2 cut(s) 1969, 3312
MslI CAYNNNNRTG 4 cut(s) 71, 354, 1126, 1206
MspA1I CMGCKG 1 cut(s) 961
MspCI CTTAAG 2 cut(s) 1009, 2618
MspI CCGG 5 cut(s) 17, 189, 195, 1658, 1776
MunI CAATTG 2 cut(s) 2763, 2821
Mva1269I GAATGC 2 cut(s) 1582, 2884
MvaI CCWGG 7 cut(s) 232, 1560, 1613, 1787, 2718, 3045, 3432
MvnI CGCG 2 cut(s) 98, 888
NciI CCSGG 3 cut(s) 18, 1659, 1776
NcoI CCATGG 1 cut(s) 819
NdeI CATATG 2 cut(s) 1281, 2245
NlaIV GGNNCC 8 cut(s) 193, 498, 817, 841, 2615, 3049, 3475, 3673
NmeAIII GCCGAG 1 cut(s) 1985
NmuCI GTSAC 6 cut(s) 1082, 1222, 1443, 2129, 2367, 3497
NruI TCGCGA 1 cut(s) 888
NsiI ATGCAT 3 cut(s) 436, 2086, 3556
NspI RCATGY 2 cut(s) 3269, 3276
OliI CACNNNNGTG 2 cut(s) 354, 1126
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 1 cut(s) 114
PceI AGGCCT 1 cut(s) 680
PciI ACATGT 1 cut(s) 3265
PcsI WCGNNNNNNNCGW 5 cut(s) 47, 66, 174, 681, 2173
PctI GAATGC 2 cut(s) 1582, 2884
PdmI GAANNNNTTC 2 cut(s) 1969, 3312
Pfl23II CGTACG 1 cut(s) 93
PflFI GACNNNGTC 1 cut(s) 1441
PfoI TCCNGGA 4 cut(s) 16, 1611, 2716, 3430
Ple19I CGATCG 1 cut(s) 142
PleI GAGTC 4 cut(s) 131, 187, 2776, 3410
PmaCI CACGTG 1 cut(s) 2709
PmlI CACGTG 1 cut(s) 2709
PpsI GAGTC 4 cut(s) 131, 187, 2776, 3410
Ppu21I YACGTR 2 cut(s) 2709, 3365
PpuMI RGGWCCY 1 cut(s) 1003
PscI ACATGT 1 cut(s) 3265
PshAI GACNNNNGTC 1 cut(s) 1735
PshBI ATTAAT 1 cut(s) 798
PsiI TTATAA 1 cut(s) 1587
Psp1406I AACGTT 1 cut(s) 2218
Psp5II RGGWCCY 1 cut(s) 1003
Psp6I CCWGG 7 cut(s) 230, 1558, 1611, 1785, 2716, 3043, 3430
PspCI CACGTG 1 cut(s) 2709
PspGI CCWGG 7 cut(s) 230, 1558, 1611, 1785, 2716, 3043, 3430
PspLI CGTACG 1 cut(s) 93
PspN4I GGNNCC 8 cut(s) 193, 498, 817, 841, 2615, 3049, 3475, 3673
PspPI GGNCC 7 cut(s) 840, 1003, 1536, 1556, 2788, 3244, 3739
PspPPI RGGWCCY 1 cut(s) 1003
PspXI VCTCGAGB 1 cut(s) 176
PstI CTGCAG 2 cut(s) 1906, 2164
PsuI RGATCY 3 cut(s) 694, 2588, 2653
PsyI GACNNNGTC 1 cut(s) 1441
PvuI CGATCG 1 cut(s) 142
RruI TCGCGA 1 cut(s) 888
RseI CAYNNNNRTG 4 cut(s) 71, 354, 1126, 1206
SalI GTCGAC 1 cut(s) 3680
Sau96I GGNCC 7 cut(s) 840, 1003, 1536, 1556, 2788, 3244, 3739
ScaI AGTACT 2 cut(s) 1492, 3160
SchI GAGTC 4 cut(s) 132, 188, 2777, 3411
SduI GDGCHC 7 cut(s) 351, 361, 1776, 1918, 3019, 3123, 3488
SfcI CTRYAG 4 cut(s) 1176, 1902, 2160, 2856
Sfr274I CTCGAG 1 cut(s) 176
SinI GGWCC 4 cut(s) 840, 1003, 2788, 3739
SlaI CTCGAG 1 cut(s) 176
SmiMI CAYNNNNRTG 4 cut(s) 71, 354, 1126, 1206
SmlI CTYRAG 7 cut(s) 176, 352, 459, 1009, 1264, 2517, 2618
SmoI CTYRAG 7 cut(s) 176, 352, 459, 1009, 1264, 2517, 2618
SseBI AGGCCT 1 cut(s) 680
SsiI CCGC 7 cut(s) 55, 98, 324, 327, 741, 959, 2862
SspI AATATT 3 cut(s) 565, 1604, 3327
SspMI CTAG 5 cut(s) 519, 944, 1670, 2385, 3209
StuI AGGCCT 1 cut(s) 680
StyI CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
TaaI ACNGT 4 cut(s) 2129, 2280, 2417, 3006
TaiI ACGT 9 cut(s) 630, 1329, 2170, 2221, 2300, 2711, 3367, 3681, 3799
TaqII GACCGA 1 cut(s) 320
TatI WGTACW 5 cut(s) 547, 1490, 1804, 3158, 3730
TauI GCSGC 5 cut(s) 101, 327, 330, 743, 2864
TscAI CASTG 8 cut(s) 167, 384, 513, 1133, 1906, 1936, 2855, 3076
TseFI GTSAC 6 cut(s) 1082, 1222, 1443, 2129, 2367, 3497
TseI GCWGC 7 cut(s) 235, 413, 669, 949, 1172, 1940, 2159
Tsp45I GTSAC 6 cut(s) 1082, 1222, 1443, 2129, 2367, 3497
TspGWI ACGGA 3 cut(s) 458, 2705, 3040
TspRI CASTG 8 cut(s) 167, 384, 513, 1133, 1906, 1936, 2855, 3076
Tth111I GACNNNGTC 1 cut(s) 1441
Vha464I CTTAAG 2 cut(s) 1009, 2618
VneI GTGCAC 1 cut(s) 1914
VpaK11BI GGWCC 4 cut(s) 840, 1003, 2788, 3739
VspI ATTAAT 1 cut(s) 798
XceI RCATGY 2 cut(s) 3269, 3276
XcmI CCANNNNNNNNNTGG 2 cut(s) 850, 1619
XhoI CTCGAG 1 cut(s) 176
XmiI GTMKAC 1 cut(s) 3681
XmnI GAANNNNTTC 2 cut(s) 1969, 3312
XspI CTAG 5 cut(s) 519, 944, 1670, 2385, 3209
ZrmI AGTACT 2 cut(s) 1492, 3160
Zsp2I ATGCAT 3 cut(s) 436, 2086, 3556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.