TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 559 |
| AccI | GTMKAC | 1 cut(s) | 720 |
| AccII | CGCG | 1 cut(s) | 308 |
| AciI | CCGC | 3 cut(s) | 188, 256, 308 |
| AclI | AACGTT | 1 cut(s) | 1582 |
| AclWI | GGATC | 3 cut(s) | 284, 395, 1016 |
| AcoI | YGGCCR | 1 cut(s) | 618 |
| AcsI | RAATTY | 7 cut(s) | 613, 709, 804, 860, 1332, 1401, 1416 |
| AcuI | CTGAAG | 4 cut(s) | 112, 666, 1216, 1406 |
| AcyI | GRCGYC | 1 cut(s) | 556 |
| AfaI | GTAC | 4 cut(s) | 86, 305, 568, 1047 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 421 |
| AflIII | ACRYGT | 1 cut(s) | 114 |
| AgsI | TTSAA | 8 cut(s) | 315, 709, 737, 749, 1087, 1250, 1331, 1396 |
| AjiI | CACGTC | 1 cut(s) | 115 |
| AjnI | CCWGG | 2 cut(s) | 264, 420 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 936, 968 |
| Alw21I | GWGCWC | 2 cut(s) | 342, 1230 |
| Alw44I | GTGCAC | 1 cut(s) | 338 |
| AlwI | GGATC | 3 cut(s) | 284, 395, 1016 |
| AoxI | GGCC | 3 cut(s) | 423, 618, 641 |
| ApaLI | GTGCAC | 1 cut(s) | 338 |
| ApeKI | GCWGC | 4 cut(s) | 173, 482, 593, 608 |
| ApoI | RAATTY | 7 cut(s) | 613, 709, 804, 860, 1332, 1401, 1416 |
| AseI | ATTAAT | 1 cut(s) | 756 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 951 |
| AspS9I | GGNCC | 4 cut(s) | 150, 160, 1078, 1118 |
| AsuC2I | CCSGG | 2 cut(s) | 39, 1122 |
| AsuHPI | GGTGA | 3 cut(s) | 51, 146, 1004 |
| AvaII | GGWCC | 4 cut(s) | 150, 160, 1078, 1118 |
| BaeGI | GKGCMC | 1 cut(s) | 342 |
| BanII | GRGCYC | 1 cut(s) | 1230 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1282, 1314 |
| BauI | CACGAG | 1 cut(s) | 741 |
| BbsI | GAAGAC | 3 cut(s) | 144, 283, 370 |
| Bbv12I | GWGCWC | 2 cut(s) | 342, 1230 |
| BbvI | GCAGC | 4 cut(s) | 160, 494, 580, 595 |
| BccI | CCATC | 2 cut(s) | 25, 857 |
| BciT130I | CCWGG | 2 cut(s) | 266, 422 |
| BciVI | GTATCC | 1 cut(s) | 1174 |
| BcnI | CCSGG | 2 cut(s) | 39, 1122 |
| BfaI | CTAG | 5 cut(s) | 519, 552, 893, 1002, 1163 |
| BfmI | CTRYAG | 1 cut(s) | 546 |
| BfuI | GTATCC | 1 cut(s) | 1174 |
| BisI | GCNGC | 4 cut(s) | 174, 483, 594, 609 |
| BlsI | GCNGC | 4 cut(s) | 175, 484, 595, 610 |
| Bme1390I | CCNGG | 4 cut(s) | 39, 266, 422, 1122 |
| Bme18I | GGWCC | 4 cut(s) | 150, 160, 1078, 1118 |
| BmgBI | CACGTC | 1 cut(s) | 115 |
| BmgT120I | GGNCC | 4 cut(s) | 150, 160, 1078, 1118 |
| BmiI | GGNNCC | 2 cut(s) | 15, 69 |
| BmrFI | CCNGG | 4 cut(s) | 39, 266, 422, 1122 |
| BmrI | ACTGGG | 2 cut(s) | 97, 719 |
| BmsI | GCATC | 4 cut(s) | 199, 514, 1435, 1611 |
| BmuI | ACTGGG | 2 cut(s) | 97, 719 |
| BpiI | GAAGAC | 3 cut(s) | 144, 283, 370 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 580, 612 |
| BpmI | CTGGAG | 2 cut(s) | 86, 1536 |
| BpuEI | CTTGAG | 4 cut(s) | 347, 1244, 1270, 1517 |
| BpuMI | CCSGG | 2 cut(s) | 39, 1122 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1068 |
| BsaHI | GRCGYC | 1 cut(s) | 556 |
| BsaJI | CCNNGG | 2 cut(s) | 38, 213 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 59, 89 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 421 |
| Bse118I | RCCGGY | 2 cut(s) | 425, 620 |
| Bse1I | ACTGG | 3 cut(s) | 69, 92, 725 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1068 |
| BseBI | CCWGG | 2 cut(s) | 266, 422 |
| BseDI | CCNNGG | 2 cut(s) | 38, 213 |
| BseGI | GGATG | 2 cut(s) | 214, 1544 |
| BseJI | GATNNNNATC | 1 cut(s) | 1068 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 421 |
| BseMII | CTCAG | 2 cut(s) | 309, 1444 |
| BseNI | ACTGG | 3 cut(s) | 69, 92, 725 |
| BseRI | GAGGAG | 1 cut(s) | 344 |
| BseSI | GKGCMC | 1 cut(s) | 342 |
| BseXI | GCAGC | 4 cut(s) | 160, 494, 580, 595 |
| BsgI | GTGCAG | 1 cut(s) | 159 |
| Bsh1236I | CGCG | 1 cut(s) | 308 |
| BshFI | GGCC | 3 cut(s) | 425, 620, 643 |
| BsiHKAI | GWGCWC | 2 cut(s) | 342, 1230 |
| BsiSI | CCGG | 4 cut(s) | 38, 426, 621, 1121 |
| BslFI | GGGAC | 3 cut(s) | 104, 231, 507 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 421 |
| BsmFI | GGGAC | 3 cut(s) | 104, 231, 507 |
| BsmI | GAATGC | 2 cut(s) | 43, 1093 |
| BsnI | GGCC | 3 cut(s) | 425, 620, 643 |
| Bsp1286I | GDGCHC | 2 cut(s) | 342, 1230 |
| Bsp143I | GATC | 5 cut(s) | 276, 400, 1008, 1069, 1150 |
| BspACI | CCGC | 3 cut(s) | 188, 256, 308 |
| BspANI | GGCC | 3 cut(s) | 425, 620, 643 |
| BspCNI | CTCAG | 2 cut(s) | 308, 1443 |
| BspFNI | CGCG | 1 cut(s) | 308 |
| BspHI | TCATGA | 2 cut(s) | 1072, 1617 |
| BspLI | GGNNCC | 2 cut(s) | 15, 69 |
| BspPI | GGATC | 3 cut(s) | 284, 395, 1016 |
| BspQI | GCTCTTC | 1 cut(s) | 1235 |
| BsrFI | RCCGGY | 2 cut(s) | 425, 620 |
| BsrI | ACTGG | 3 cut(s) | 69, 92, 725 |
| BssAI | RCCGGY | 2 cut(s) | 425, 620 |
| BssECI | CCNNGG | 2 cut(s) | 38, 213 |
| BssMI | GATC | 5 cut(s) | 276, 400, 1008, 1069, 1150 |
| BssNI | GRCGYC | 1 cut(s) | 556 |
| BssSI | CACGAG | 1 cut(s) | 741 |
| Bst2BI | CACGAG | 1 cut(s) | 741 |
| Bst2UI | CCWGG | 2 cut(s) | 266, 422 |
| Bst4CI | ACNGT | 7 cut(s) | 75, 84, 838, 881, 929, 1307, 1597 |
| Bst6I | CTCTTC | 3 cut(s) | 220, 1235, 1285 |
| BstACI | GRCGYC | 1 cut(s) | 556 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1630 |
| BstC8I | GCNNGC | 2 cut(s) | 622, 1242 |
| BstDEI | CTNAG | 3 cut(s) | 221, 295, 1430 |
| BstF5I | GGATG | 2 cut(s) | 214, 1544 |
| BstFNI | CGCG | 1 cut(s) | 308 |
| BstKTI | GATC | 5 cut(s) | 279, 403, 1011, 1072, 1153 |
| BstMBI | GATC | 5 cut(s) | 276, 400, 1008, 1069, 1150 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 617, 1621, 1630 |
| BstNI | CCWGG | 2 cut(s) | 266, 422 |
| BstNSI | RCATGY | 1 cut(s) | 1244 |
| BstSCI | CCNGG | 4 cut(s) | 37, 264, 420, 1120 |
| BstSFI | CTRYAG | 1 cut(s) | 546 |
| BstSLI | GKGCMC | 1 cut(s) | 342 |
| BstUI | CGCG | 1 cut(s) | 308 |
| BstV1I | GCAGC | 4 cut(s) | 160, 494, 580, 595 |
| BstV2I | GAAGAC | 3 cut(s) | 144, 283, 370 |
| BstX2I | RGATCY | 1 cut(s) | 276 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 985 |
| BstYI | RGATCY | 1 cut(s) | 276 |
| BsuI | GTATCC | 1 cut(s) | 1174 |
| BsuRI | GGCC | 3 cut(s) | 425, 620, 643 |
| BtrI | CACGTC | 1 cut(s) | 115 |
| BtsCI | GGATG | 2 cut(s) | 214, 1544 |
| BtsIMutI | CAGTG | 4 cut(s) | 62, 80, 1382, 1573 |
| Cac8I | GCNNGC | 2 cut(s) | 622, 1242 |
| CciI | TCATGA | 2 cut(s) | 1072, 1617 |
| Cfr10I | RCCGGY | 2 cut(s) | 425, 620 |
| Cfr13I | GGNCC | 4 cut(s) | 150, 160, 1078, 1118 |
| Csp6I | GTAC | 4 cut(s) | 85, 304, 567, 1046 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1275, 1310, 1522, 1557 |
| CviQI | GTAC | 4 cut(s) | 85, 304, 567, 1046 |
| DdeI | CTNAG | 3 cut(s) | 221, 295, 1430 |
| DpnI | GATC | 5 cut(s) | 278, 402, 1010, 1071, 1152 |
| DpnII | GATC | 5 cut(s) | 276, 400, 1008, 1069, 1150 |
| EaeI | YGGCCR | 1 cut(s) | 618 |
| Eam1104I | CTCTTC | 3 cut(s) | 220, 1235, 1285 |
| EarI | CTCTTC | 3 cut(s) | 220, 1235, 1285 |
| EciI | GGCGGA | 1 cut(s) | 271 |
| Ecl136II | GAGCTC | 1 cut(s) | 1228 |
| Eco147I | AGGCCT | 1 cut(s) | 643 |
| Eco24I | GRGCYC | 1 cut(s) | 1230 |
| Eco47I | GGWCC | 4 cut(s) | 150, 160, 1078, 1118 |
| Eco53kI | GAGCTC | 1 cut(s) | 1228 |
| Eco57I | CTGAAG | 4 cut(s) | 112, 666, 1216, 1406 |
| EcoICRI | GAGCTC | 1 cut(s) | 1228 |
| EcoO109I | RGGNCCY | 1 cut(s) | 150 |
| EcoRI | GAATTC | 1 cut(s) | 1416 |
| EcoRII | CCWGG | 2 cut(s) | 264, 420 |
| EcoT22I | ATGCAT | 2 cut(s) | 1093, 1626 |
| EcoT38I | GRGCYC | 1 cut(s) | 1230 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 490, 522, 936, 968, 1206, 1238 |
| FaqI | GGGAC | 3 cut(s) | 104, 231, 507 |
| FauI | CCCGC | 1 cut(s) | 181 |
| FblI | GTMKAC | 1 cut(s) | 720 |
| Fnu4HI | GCNGC | 4 cut(s) | 174, 483, 594, 609 |
| FokI | GGATG | 2 cut(s) | 221, 1551 |
| FriOI | GRGCYC | 1 cut(s) | 1230 |
| Fsp4HI | GCNGC | 4 cut(s) | 174, 483, 594, 609 |
| FspBI | CTAG | 5 cut(s) | 519, 552, 893, 1002, 1163 |
| GluI | GCNGC | 4 cut(s) | 174, 483, 594, 609 |
| GsuI | CTGGAG | 2 cut(s) | 86, 1536 |
| HaeIII | GGCC | 3 cut(s) | 425, 620, 643 |
| HapII | CCGG | 4 cut(s) | 38, 426, 621, 1121 |
| Hin1I | GRCGYC | 1 cut(s) | 556 |
| HincII | GTYRAC | 2 cut(s) | 9, 673 |
| HindII | GTYRAC | 2 cut(s) | 9, 673 |
| HindIII | AAGCTT | 1 cut(s) | 1438 |
| HinfI | GANTC | 5 cut(s) | 192, 311, 737, 920, 1109 |
| HpaII | CCGG | 4 cut(s) | 38, 426, 621, 1121 |
| HphI | GGTGA | 3 cut(s) | 51, 146, 1004 |
| Hpy166II | GTNNAC | 5 cut(s) | 9, 340, 673, 721, 1316 |
| Hpy188I | TCNGA | 9 cut(s) | 131, 244, 298, 416, 961, 1194, 1415, 1433, 1502 |
| Hpy8I | GTNNAC | 5 cut(s) | 9, 340, 673, 721, 1316 |
| Hpy99I | CGWCG | 1 cut(s) | 116 |
| HpyAV | CCTTC | 5 cut(s) | 163, 414, 492, 1029, 1350 |
| HpyCH4III | ACNGT | 7 cut(s) | 75, 84, 838, 881, 929, 1307, 1597 |
| HpyCH4IV | ACGT | 4 cut(s) | 114, 200, 556, 1582 |
| HpyCH4V | TGCA | 9 cut(s) | 176, 340, 527, 611, 684, 914, 1091, 1448, 1624 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 617, 1621, 1630 |
| HpyF3I | CTNAG | 3 cut(s) | 221, 295, 1430 |
| HpySE526I | ACGT | 4 cut(s) | 114, 200, 556, 1582 |
| Hsp92I | GRCGYC | 1 cut(s) | 556 |
| KroI | GCCGGC | 1 cut(s) | 620 |
| KroNI | GCCGGC | 1 cut(s) | 622 |
| Kzo9I | GATC | 5 cut(s) | 276, 400, 1008, 1069, 1150 |
| LguI | GCTCTTC | 1 cut(s) | 1235 |
| LmnI | GCTCC | 6 cut(s) | 13, 67, 331, 605, 1359, 1581 |
| Lsp1109I | GCAGC | 4 cut(s) | 160, 494, 580, 595 |
| LweI | GCATC | 4 cut(s) | 199, 514, 1435, 1611 |
| MaeI | CTAG | 5 cut(s) | 519, 552, 893, 1002, 1163 |
| MaeII | ACGT | 4 cut(s) | 114, 200, 556, 1582 |
| MaeIII | GTNAC | 4 cut(s) | 502, 1297, 1490, 1591 |
| MalI | GATC | 5 cut(s) | 278, 402, 1010, 1071, 1152 |
| MboI | GATC | 5 cut(s) | 276, 400, 1008, 1069, 1150 |
| MfeI | CAATTG | 2 cut(s) | 1082, 1449 |
| MflI | RGATCY | 1 cut(s) | 276 |
| MhlI | GDGCHC | 2 cut(s) | 342, 1230 |
| MlyI | GAGTC | 2 cut(s) | 201, 914 |
| MmeI | TCCRAC | 4 cut(s) | 709, 754, 781, 1603 |
| Mph1103I | ATGCAT | 2 cut(s) | 1093, 1626 |
| MroNI | GCCGGC | 1 cut(s) | 620 |
| MroXI | GAANNNNTTC | 1 cut(s) | 951 |
| MseI | TTAA | 3 cut(s) | 600, 756, 968 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1502 |
| MspA1I | CMGCKG | 1 cut(s) | 691 |
| MspI | CCGG | 4 cut(s) | 38, 426, 621, 1121 |
| MspR9I | CCNGG | 4 cut(s) | 39, 266, 422, 1122 |
| MunI | CAATTG | 2 cut(s) | 1082, 1449 |
| Mva1269I | GAATGC | 2 cut(s) | 43, 1093 |
| MvaI | CCWGG | 2 cut(s) | 266, 422 |
| MvnI | CGCG | 1 cut(s) | 308 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 617, 1621, 1630 |
| NaeI | GCCGGC | 1 cut(s) | 622 |
| NciI | CCSGG | 2 cut(s) | 39, 1122 |
| NdeII | GATC | 5 cut(s) | 276, 400, 1008, 1069, 1150 |
| NgoMIV | GCCGGC | 1 cut(s) | 620 |
| NlaIV | GGNNCC | 2 cut(s) | 15, 69 |
| NmeAIII | GCCGAG | 1 cut(s) | 238 |
| NsiI | ATGCAT | 2 cut(s) | 1093, 1626 |
| NspI | RCATGY | 1 cut(s) | 1244 |
| PaeI | GCATGC | 1 cut(s) | 1244 |
| PagI | TCATGA | 2 cut(s) | 1072, 1617 |
| PceI | AGGCCT | 1 cut(s) | 643 |
| PciSI | GCTCTTC | 1 cut(s) | 1235 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 117 |
| PctI | GAATGC | 2 cut(s) | 43, 1093 |
| PdiI | GCCGGC | 1 cut(s) | 622 |
| PdmI | GAANNNNTTC | 1 cut(s) | 951 |
| PfeI | GAWTC | 3 cut(s) | 311, 737, 1109 |
| PfoI | TCCNGGA | 2 cut(s) | 264, 1120 |
| PkrI | GCNGC | 4 cut(s) | 175, 484, 595, 610 |
| PleI | GAGTC | 2 cut(s) | 200, 914 |
| PpsI | GAGTC | 2 cut(s) | 200, 914 |
| PpuMI | RGGWCCY | 1 cut(s) | 150 |
| PshBI | ATTAAT | 1 cut(s) | 756 |
| Psp124BI | GAGCTC | 1 cut(s) | 1230 |
| Psp1406I | AACGTT | 1 cut(s) | 1582 |
| Psp5II | RGGWCCY | 1 cut(s) | 150 |
| Psp6I | CCWGG | 2 cut(s) | 264, 420 |
| PspGI | CCWGG | 2 cut(s) | 264, 420 |
| PspN4I | GGNNCC | 2 cut(s) | 15, 69 |
| PspPI | GGNCC | 4 cut(s) | 150, 160, 1078, 1118 |
| PspPPI | RGGWCCY | 1 cut(s) | 150 |
| PsuI | RGATCY | 1 cut(s) | 276 |
| PvuII | CAGCTG | 1 cut(s) | 691 |
| RsaI | GTAC | 4 cut(s) | 86, 305, 568, 1047 |
| RsaNI | GTAC | 4 cut(s) | 85, 304, 567, 1046 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1502 |
| SacI | GAGCTC | 1 cut(s) | 1230 |
| SapI | GCTCTTC | 1 cut(s) | 1235 |
| SaqAI | TTAA | 3 cut(s) | 600, 756, 968 |
| SatI | GCNGC | 4 cut(s) | 174, 483, 594, 609 |
| Sau3AI | GATC | 5 cut(s) | 276, 400, 1008, 1069, 1150 |
| Sau96I | GGNCC | 4 cut(s) | 150, 160, 1078, 1118 |
| SchI | GAGTC | 2 cut(s) | 201, 914 |
| ScrFI | CCNGG | 4 cut(s) | 39, 266, 422, 1122 |
| SduI | GDGCHC | 2 cut(s) | 342, 1230 |
| SfaNI | GCATC | 4 cut(s) | 199, 514, 1435, 1611 |
| SfcI | CTRYAG | 1 cut(s) | 546 |
| SinI | GGWCC | 4 cut(s) | 150, 160, 1078, 1118 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1502 |
| SmlI | CTYRAG | 4 cut(s) | 326, 1223, 1285, 1532 |
| SmoI | CTYRAG | 4 cut(s) | 326, 1223, 1285, 1532 |
| SphI | GCATGC | 1 cut(s) | 1244 |
| SseBI | AGGCCT | 1 cut(s) | 643 |
| SsiI | CCGC | 3 cut(s) | 188, 256, 308 |
| SspI | AATATT | 1 cut(s) | 387 |
| SspMI | CTAG | 5 cut(s) | 519, 552, 893, 1002, 1163 |
| SstI | GAGCTC | 1 cut(s) | 1230 |
| StuI | AGGCCT | 1 cut(s) | 643 |
| StyD4I | CCNGG | 4 cut(s) | 37, 264, 420, 1120 |
| TaaI | ACNGT | 7 cut(s) | 75, 84, 838, 881, 929, 1307, 1597 |
| TaiI | ACGT | 4 cut(s) | 117, 203, 559, 1585 |
| TaqI | TCGA | 3 cut(s) | 627, 1153, 1278 |
| TatI | WGTACW | 1 cut(s) | 84 |
| TfiI | GAWTC | 3 cut(s) | 311, 737, 1109 |
| Tru1I | TTAA | 3 cut(s) | 600, 756, 968 |
| Tru9I | TTAA | 3 cut(s) | 600, 756, 968 |
| TscAI | CASTG | 4 cut(s) | 69, 87, 1389, 1573 |
| TseI | GCWGC | 4 cut(s) | 173, 482, 593, 608 |
| TspDTI | ATGAA | 8 cut(s) | 17, 36, 555, 1042, 1220, 1224, 1281, 1486 |
| TspGWI | ACGGA | 2 cut(s) | 26, 173 |
| TspRI | CASTG | 4 cut(s) | 69, 87, 1389, 1573 |
| VneI | GTGCAC | 1 cut(s) | 338 |
| VpaK11BI | GGWCC | 4 cut(s) | 150, 160, 1078, 1118 |
| VspI | ATTAAT | 1 cut(s) | 756 |
| XapI | RAATTY | 7 cut(s) | 613, 709, 804, 860, 1332, 1401, 1416 |
| XbaI | TCTAGA | 1 cut(s) | 1001 |
| XceI | RCATGY | 1 cut(s) | 1244 |
| XmiI | GTMKAC | 1 cut(s) | 720 |
| XmnI | GAANNNNTTC | 1 cut(s) | 951 |
| XspI | CTAG | 5 cut(s) | 519, 552, 893, 1002, 1163 |
| ZraI | GACGTC | 1 cut(s) | 557 |
| Zsp2I | ATGCAT | 2 cut(s) | 1093, 1626 |