TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 24 - 205 | 2.5e-51 | TIR domain |
| TIR_2 | PF13676 | 28 - 124 | 1.5e-15 | TIR domain |
| NB-ARC | PF00931 | 218 - 386 | 1.2e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 455 - 524 | 5.9e-16 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 680 - 774 | 1e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 916 - 959 | 3.7e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 762, 1037 |
| AarI | CACCTGC | 1 cut(s) | 138 |
| Acc36I | ACCTGC | 1 cut(s) | 138 |
| AccBSI | CCGCTC | 1 cut(s) | 2316 |
| AccII | CGCG | 3 cut(s) | 109, 137, 549 |
| AciI | CCGC | 5 cut(s) | 39, 137, 272, 1888, 2314 |
| AclWI | GGATC | 4 cut(s) | 248, 315, 359, 697 |
| AcoI | YGGCCR | 3 cut(s) | 523, 624, 1545 |
| AcsI | RAATTY | 4 cut(s) | 711, 768, 2183, 2747 |
| AcuI | CTGAAG | 4 cut(s) | 76, 924, 1671, 1733 |
| AfaI | GTAC | 7 cut(s) | 632, 948, 1711, 1905, 2265, 2469, 2829 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 136, 330, 2063, 2627 |
| AflIII | ACRYGT | 3 cut(s) | 337, 373, 777 |
| AhlI | ACTAGT | 2 cut(s) | 1870, 2434 |
| AjnI | CCWGG | 5 cut(s) | 159, 1021, 1098, 1380, 1573 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 994, 1026 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 681, 713 |
| Alw21I | GWGCWC | 2 cut(s) | 608, 1131 |
| Alw26I | GTCTC | 3 cut(s) | 2150, 2658, 2714 |
| AlwI | GGATC | 4 cut(s) | 248, 315, 359, 697 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 509 |
| AoxI | GGCC | 6 cut(s) | 124, 523, 624, 1095, 1160, 1545 |
| ApeKI | GCWGC | 4 cut(s) | 16, 509, 746, 2322 |
| ApoI | RAATTY | 4 cut(s) | 711, 768, 2183, 2747 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 597, 646, 2889 |
| AspLEI | GCGC | 2 cut(s) | 111, 549 |
| AspS9I | GGNCC | 3 cut(s) | 979, 1019, 1096 |
| AsuC2I | CCSGG | 2 cut(s) | 221, 635 |
| AsuHPI | GGTGA | 8 cut(s) | 110, 313, 1571, 2045, 2101, 2538, 2609, 2665 |
| AsuII | TTCGAA | 1 cut(s) | 1347 |
| AvaII | GGWCC | 2 cut(s) | 979, 1019 |
| BalI | TGGCCA | 3 cut(s) | 525, 626, 1547 |
| BanII | GRGCYC | 1 cut(s) | 1131 |
| BauI | CACGAG | 1 cut(s) | 1047 |
| BbsI | GAAGAC | 3 cut(s) | 108, 247, 2345 |
| Bbv12I | GWGCWC | 2 cut(s) | 608, 1131 |
| BbvI | GCAGC | 4 cut(s) | 28, 496, 733, 2309 |
| BccI | CCATC | 5 cut(s) | 254, 383, 440, 965, 1433 |
| BceAI | ACGGC | 3 cut(s) | 130, 1175, 2091 |
| BciT130I | CCWGG | 5 cut(s) | 161, 1023, 1100, 1382, 1575 |
| BciVI | GTATCC | 1 cut(s) | 149 |
| BcnI | CCSGG | 2 cut(s) | 221, 635 |
| BcoDI | GTCTC | 3 cut(s) | 2150, 2658, 2714 |
| BcuI | ACTAGT | 2 cut(s) | 1870, 2434 |
| BfaI | CTAG | 7 cut(s) | 617, 836, 1226, 1355, 1701, 1871, 2435 |
| BfuAI | ACCTGC | 1 cut(s) | 138 |
| BfuI | GTATCC | 1 cut(s) | 149 |
| BisI | GCNGC | 5 cut(s) | 17, 138, 510, 747, 2323 |
| BlsI | GCNGC | 5 cut(s) | 18, 139, 511, 748, 2324 |
| Bme1390I | CCNGG | 7 cut(s) | 161, 221, 635, 1023, 1100, 1382, 1575 |
| Bme18I | GGWCC | 2 cut(s) | 979, 1019 |
| BmgT120I | GGNCC | 3 cut(s) | 979, 1019, 1096 |
| BmiI | GGNNCC | 2 cut(s) | 1921, 2485 |
| BmrFI | CCNGG | 7 cut(s) | 161, 221, 635, 1023, 1100, 1382, 1575 |
| BmrI | ACTGGG | 1 cut(s) | 338 |
| BmsI | GCATC | 6 cut(s) | 438, 1478, 1875, 2093, 2378, 2439 |
| BmuI | ACTGGG | 1 cut(s) | 338 |
| BpiI | GAAGAC | 3 cut(s) | 108, 247, 2345 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 481, 513 |
| BpmI | CTGGAG | 2 cut(s) | 1145, 2302 |
| Bpu14I | TTCGAA | 1 cut(s) | 1347 |
| BpuEI | CTTGAG | 3 cut(s) | 106, 1153, 2117 |
| BpuMI | CCSGG | 2 cut(s) | 221, 635 |
| BsaBI | GATNNNNATC | 1 cut(s) | 245 |
| BsaJI | CCNNGG | 4 cut(s) | 1098, 1573, 2126, 2690 |
| BsaWI | WCCGGW | 1 cut(s) | 2548 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 136, 330, 2063, 2627 |
| Bse1I | ACTGG | 3 cut(s) | 333, 1905, 2469 |
| Bse3DI | GCAATG | 1 cut(s) | 1702 |
| Bse8I | GATNNNNATC | 1 cut(s) | 245 |
| BseBI | CCWGG | 5 cut(s) | 161, 1023, 1100, 1382, 1575 |
| BseDI | CCNNGG | 4 cut(s) | 1098, 1573, 2126, 2690 |
| BseGI | GGATG | 7 cut(s) | 178, 394, 1448, 1612, 2108, 2393, 2744 |
| BseJI | GATNNNNATC | 1 cut(s) | 245 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 136, 330, 2063, 2627 |
| BseMI | GCAATG | 1 cut(s) | 1702 |
| BseMII | CTCAG | 4 cut(s) | 1730, 1969, 2533, 2780 |
| BseNI | ACTGG | 3 cut(s) | 333, 1905, 2469 |
| BseRI | GAGGAG | 1 cut(s) | 40 |
| BseXI | GCAGC | 4 cut(s) | 28, 496, 733, 2309 |
| BsgI | GTGCAG | 2 cut(s) | 116, 337 |
| Bsh1236I | CGCG | 3 cut(s) | 109, 137, 549 |
| BshFI | GGCC | 6 cut(s) | 126, 525, 626, 1097, 1162, 1547 |
| BsiHKAI | GWGCWC | 2 cut(s) | 608, 1131 |
| BsiSI | CCGG | 3 cut(s) | 220, 635, 2549 |
| BslFI | GGGAC | 2 cut(s) | 1985, 2549 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 136, 330, 2063, 2627 |
| BsmAI | GTCTC | 3 cut(s) | 2150, 2658, 2714 |
| BsmFI | GGGAC | 2 cut(s) | 1985, 2549 |
| BsmI | GAATGC | 2 cut(s) | 654, 994 |
| BsnI | GGCC | 6 cut(s) | 126, 525, 626, 1097, 1162, 1547 |
| Bsp119I | TTCGAA | 1 cut(s) | 1347 |
| Bsp1286I | GDGCHC | 2 cut(s) | 608, 1131 |
| BspACI | CCGC | 5 cut(s) | 39, 137, 272, 1888, 2314 |
| BspANI | GGCC | 6 cut(s) | 126, 525, 626, 1097, 1162, 1547 |
| BspCNI | CTCAG | 4 cut(s) | 1731, 1968, 2532, 2781 |
| BspFNI | CGCG | 3 cut(s) | 109, 137, 549 |
| BspHI | TCATGA | 1 cut(s) | 658 |
| BspLI | GGNNCC | 2 cut(s) | 1921, 2485 |
| BspMI | ACCTGC | 1 cut(s) | 138 |
| BspPI | GGATC | 4 cut(s) | 248, 315, 359, 697 |
| BspT104I | TTCGAA | 1 cut(s) | 1347 |
| BsrBI | CCGCTC | 1 cut(s) | 2316 |
| BsrDI | GCAATG | 1 cut(s) | 1702 |
| BsrI | ACTGG | 3 cut(s) | 333, 1905, 2469 |
| BssECI | CCNNGG | 4 cut(s) | 1098, 1573, 2126, 2690 |
| BssSI | CACGAG | 1 cut(s) | 1047 |
| BssT1I | CCWWGG | 2 cut(s) | 2126, 2690 |
| Bst2BI | CACGAG | 1 cut(s) | 1047 |
| Bst2UI | CCWGG | 5 cut(s) | 161, 1023, 1100, 1382, 1575 |
| Bst4CI | ACNGT | 5 cut(s) | 10, 216, 1211, 1501, 2669 |
| Bst6I | CTCTTC | 7 cut(s) | 1266, 2007, 2127, 2166, 2571, 2691, 2730 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1531 |
| BstBI | TTCGAA | 1 cut(s) | 1347 |
| BstC8I | GCNNGC | 2 cut(s) | 135, 1143 |
| BstDEI | CTNAG | 6 cut(s) | 1334, 1739, 1955, 2519, 2660, 2789 |
| BstEII | GGTNACC | 1 cut(s) | 1577 |
| BstF5I | GGATG | 7 cut(s) | 178, 394, 1448, 1612, 2108, 2393, 2744 |
| BstFNI | CGCG | 3 cut(s) | 109, 137, 549 |
| BstHHI | GCGC | 2 cut(s) | 111, 549 |
| BstMAI | GTCTC | 3 cut(s) | 2150, 2658, 2714 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 32, 123, 752, 1531, 2322 |
| BstNI | CCWGG | 5 cut(s) | 161, 1023, 1100, 1382, 1575 |
| BstNSI | RCATGY | 4 cut(s) | 341, 377, 781, 1145 |
| BstPI | GGTNACC | 1 cut(s) | 1577 |
| BstSCI | CCNGG | 7 cut(s) | 159, 219, 633, 1021, 1098, 1380, 1573 |
| BstUI | CGCG | 3 cut(s) | 109, 137, 549 |
| BstV1I | GCAGC | 4 cut(s) | 28, 496, 733, 2309 |
| BstV2I | GAAGAC | 3 cut(s) | 108, 247, 2345 |
| BstX2I | RGATCY | 2 cut(s) | 240, 320 |
| BstYI | RGATCY | 2 cut(s) | 240, 320 |
| BsuI | GTATCC | 1 cut(s) | 149 |
| BsuRI | GGCC | 6 cut(s) | 126, 525, 626, 1097, 1162, 1547 |
| BtsCI | GGATG | 7 cut(s) | 178, 394, 1448, 1612, 2108, 2393, 2744 |
| BtsI | GCAGTG | 3 cut(s) | 491, 816, 901 |
| BtsIMutI | CAGTG | 7 cut(s) | 6, 491, 534, 816, 901, 1477, 2786 |
| BveI | ACCTGC | 1 cut(s) | 138 |
| Cac8I | GCNNGC | 2 cut(s) | 135, 1143 |
| CaiI | CAGNNNCTG | 1 cut(s) | 509 |
| CciI | TCATGA | 1 cut(s) | 658 |
| CfoI | GCGC | 2 cut(s) | 111, 549 |
| Cfr13I | GGNCC | 3 cut(s) | 979, 1019, 1096 |
| Csp6I | GTAC | 7 cut(s) | 631, 947, 1710, 1904, 2264, 2468, 2828 |
| CviQI | GTAC | 7 cut(s) | 631, 947, 1710, 1904, 2264, 2468, 2828 |
| DdeI | CTNAG | 6 cut(s) | 1334, 1739, 1955, 2519, 2660, 2789 |
| DraI | TTTAAA | 4 cut(s) | 145, 1833, 2181, 2397 |
| EaeI | YGGCCR | 3 cut(s) | 523, 624, 1545 |
| Eam1104I | CTCTTC | 7 cut(s) | 1266, 2007, 2127, 2166, 2571, 2691, 2730 |
| EarI | CTCTTC | 7 cut(s) | 1266, 2007, 2127, 2166, 2571, 2691, 2730 |
| Ecl136II | GAGCTC | 1 cut(s) | 1129 |
| Eco130I | CCWWGG | 2 cut(s) | 2126, 2690 |
| Eco24I | GRGCYC | 1 cut(s) | 1131 |
| Eco32I | GATATC | 2 cut(s) | 1178, 2220 |
| Eco47I | GGWCC | 2 cut(s) | 979, 1019 |
| Eco53kI | GAGCTC | 1 cut(s) | 1129 |
| Eco57I | CTGAAG | 4 cut(s) | 76, 924, 1671, 1733 |
| Eco91I | GGTNACC | 1 cut(s) | 1577 |
| EcoICRI | GAGCTC | 1 cut(s) | 1129 |
| EcoO65I | GGTNACC | 1 cut(s) | 1577 |
| EcoRII | CCWGG | 5 cut(s) | 159, 1021, 1098, 1380, 1573 |
| EcoRV | GATATC | 2 cut(s) | 1178, 2220 |
| EcoT14I | CCWWGG | 2 cut(s) | 2126, 2690 |
| EcoT22I | ATGCAT | 1 cut(s) | 1527 |
| EcoT38I | GRGCYC | 1 cut(s) | 1131 |
| ErhI | CCWWGG | 2 cut(s) | 2126, 2690 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2068, 2100, 2632, 2664 |
| FaqI | GGGAC | 2 cut(s) | 1985, 2549 |
| Fnu4HI | GCNGC | 5 cut(s) | 17, 138, 510, 747, 2323 |
| FokI | GGATG | 7 cut(s) | 185, 401, 1455, 1619, 2115, 2400, 2751 |
| FriOI | GRGCYC | 1 cut(s) | 1131 |
| Fsp4HI | GCNGC | 5 cut(s) | 17, 138, 510, 747, 2323 |
| FspBI | CTAG | 7 cut(s) | 617, 836, 1226, 1355, 1701, 1871, 2435 |
| GlaI | GCGC | 2 cut(s) | 110, 548 |
| GluI | GCNGC | 5 cut(s) | 17, 138, 510, 747, 2323 |
| GsuI | CTGGAG | 2 cut(s) | 1145, 2302 |
| HaeIII | GGCC | 6 cut(s) | 126, 525, 626, 1097, 1162, 1547 |
| HapII | CCGG | 3 cut(s) | 220, 635, 2549 |
| HhaI | GCGC | 2 cut(s) | 111, 549 |
| Hin6I | GCGC | 2 cut(s) | 109, 547 |
| HinP1I | GCGC | 2 cut(s) | 109, 547 |
| HincII | GTYRAC | 2 cut(s) | 577, 1632 |
| HindII | GTYRAC | 2 cut(s) | 577, 1632 |
| HindIII | AAGCTT | 2 cut(s) | 1342, 2111 |
| HinfI | GANTC | 9 cut(s) | 275, 642, 1467, 2050, 2158, 2290, 2614, 2722, 2854 |
| HpaII | CCGG | 3 cut(s) | 220, 635, 2549 |
| HphI | GGTGA | 8 cut(s) | 110, 313, 1571, 2045, 2101, 2538, 2609, 2665 |
| Hpy166II | GTNNAC | 8 cut(s) | 6, 577, 979, 1257, 1484, 1632, 2092, 2656 |
| Hpy188I | TCNGA | 9 cut(s) | 95, 414, 603, 865, 918, 1564, 2047, 2611, 2753 |
| Hpy8I | GTNNAC | 8 cut(s) | 6, 577, 979, 1257, 1484, 1632, 2092, 2656 |
| Hpy99I | CGWCG | 1 cut(s) | 1161 |
| HpyCH4III | ACNGT | 5 cut(s) | 10, 216, 1211, 1501, 2669 |
| HpyCH4IV | ACGT | 1 cut(s) | 457 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 32, 123, 752, 1531, 2322 |
| HpyF3I | CTNAG | 6 cut(s) | 1334, 1739, 1955, 2519, 2660, 2789 |
| HpySE526I | ACGT | 1 cut(s) | 457 |
| HspAI | GCGC | 2 cut(s) | 109, 547 |
| LmnI | GCTCC | 2 cut(s) | 1126, 2321 |
| Lsp1109I | GCAGC | 4 cut(s) | 28, 496, 733, 2309 |
| LweI | GCATC | 6 cut(s) | 438, 1478, 1875, 2093, 2378, 2439 |
| MaeI | CTAG | 7 cut(s) | 617, 836, 1226, 1355, 1701, 1871, 2435 |
| MaeII | ACGT | 1 cut(s) | 457 |
| MaeIII | GTNAC | 3 cut(s) | 1495, 1577, 1934 |
| MbiI | CCGCTC | 1 cut(s) | 2316 |
| MfeI | CAATTG | 2 cut(s) | 1009, 1286 |
| MflI | RGATCY | 2 cut(s) | 240, 320 |
| MhlI | GDGCHC | 2 cut(s) | 608, 1131 |
| MlsI | TGGCCA | 3 cut(s) | 525, 626, 1547 |
| MluNI | TGGCCA | 3 cut(s) | 525, 626, 1547 |
| MlyI | GAGTC | 2 cut(s) | 2152, 2716 |
| MmeI | TCCRAC | 3 cut(s) | 619, 688, 896 |
| Mox20I | TGGCCA | 3 cut(s) | 525, 626, 1547 |
| Mph1103I | ATGCAT | 1 cut(s) | 1527 |
| MroXI | GAANNNNTTC | 3 cut(s) | 597, 646, 2889 |
| MscI | TGGCCA | 3 cut(s) | 525, 626, 1547 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1625 |
| Msp20I | TGGCCA | 3 cut(s) | 525, 626, 1547 |
| MspA1I | CMGCKG | 2 cut(s) | 746, 2322 |
| MspI | CCGG | 3 cut(s) | 220, 635, 2549 |
| MspR9I | CCNGG | 7 cut(s) | 161, 221, 635, 1023, 1100, 1382, 1575 |
| MunI | CAATTG | 2 cut(s) | 1009, 1286 |
| Mva1269I | GAATGC | 2 cut(s) | 654, 994 |
| MvaI | CCWGG | 5 cut(s) | 161, 1023, 1100, 1382, 1575 |
| MvnI | CGCG | 3 cut(s) | 109, 137, 549 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 32, 123, 752, 1531, 2322 |
| NciI | CCSGG | 2 cut(s) | 221, 635 |
| NlaIV | GGNNCC | 2 cut(s) | 1921, 2485 |
| NmuCI | GTSAC | 1 cut(s) | 1577 |
| NsiI | ATGCAT | 1 cut(s) | 1527 |
| NspI | RCATGY | 4 cut(s) | 341, 377, 781, 1145 |
| NspV | TTCGAA | 1 cut(s) | 1347 |
| PaeI | GCATGC | 1 cut(s) | 1145 |
| PagI | TCATGA | 1 cut(s) | 658 |
| PaqCI | CACCTGC | 1 cut(s) | 138 |
| PciI | ACATGT | 3 cut(s) | 337, 373, 777 |
| PctI | GAATGC | 2 cut(s) | 654, 994 |
| PdmI | GAANNNNTTC | 3 cut(s) | 597, 646, 2889 |
| PfeI | GAWTC | 7 cut(s) | 275, 642, 1467, 2050, 2290, 2614, 2854 |
| PfoI | TCCNGGA | 3 cut(s) | 219, 1021, 1380 |
| PkrI | GCNGC | 5 cut(s) | 18, 139, 511, 748, 2324 |
| PleI | GAGTC | 2 cut(s) | 2152, 2716 |
| PpsI | GAGTC | 2 cut(s) | 2152, 2716 |
| PscI | ACATGT | 3 cut(s) | 337, 373, 777 |
| PsiI | TTATAA | 2 cut(s) | 762, 1037 |
| Psp124BI | GAGCTC | 1 cut(s) | 1131 |
| Psp6I | CCWGG | 5 cut(s) | 159, 1021, 1098, 1380, 1573 |
| PspEI | GGTNACC | 1 cut(s) | 1577 |
| PspGI | CCWGG | 5 cut(s) | 159, 1021, 1098, 1380, 1573 |
| PspN4I | GGNNCC | 2 cut(s) | 1921, 2485 |
| PspPI | GGNCC | 3 cut(s) | 979, 1019, 1096 |
| PstNI | CAGNNNCTG | 1 cut(s) | 509 |
| PsuI | RGATCY | 2 cut(s) | 240, 320 |
| PvuII | CAGCTG | 2 cut(s) | 746, 2322 |
| RsaI | GTAC | 7 cut(s) | 632, 948, 1711, 1905, 2265, 2469, 2829 |
| RsaNI | GTAC | 7 cut(s) | 631, 947, 1710, 1904, 2264, 2468, 2828 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1625 |
| SacI | GAGCTC | 1 cut(s) | 1131 |
| SatI | GCNGC | 5 cut(s) | 17, 138, 510, 747, 2323 |
| Sau96I | GGNCC | 3 cut(s) | 979, 1019, 1096 |
| SchI | GAGTC | 2 cut(s) | 2152, 2716 |
| ScrFI | CCNGG | 7 cut(s) | 161, 221, 635, 1023, 1100, 1382, 1575 |
| SduI | GDGCHC | 2 cut(s) | 608, 1131 |
| SfaNI | GCATC | 6 cut(s) | 438, 1478, 1875, 2093, 2378, 2439 |
| SfuI | TTCGAA | 1 cut(s) | 1347 |
| SinI | GGWCC | 2 cut(s) | 979, 1019 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1625 |
| SmlI | CTYRAG | 3 cut(s) | 85, 1132, 2096 |
| SmoI | CTYRAG | 3 cut(s) | 85, 1132, 2096 |
| SpeI | ACTAGT | 2 cut(s) | 1870, 2434 |
| SphI | GCATGC | 1 cut(s) | 1145 |
| SsiI | CCGC | 5 cut(s) | 39, 137, 272, 1888, 2314 |
| SspI | AATATT | 1 cut(s) | 351 |
| SspMI | CTAG | 7 cut(s) | 617, 836, 1226, 1355, 1701, 1871, 2435 |
| SstI | GAGCTC | 1 cut(s) | 1131 |
| StyD4I | CCNGG | 7 cut(s) | 159, 219, 633, 1021, 1098, 1380, 1573 |
| StyI | CCWWGG | 2 cut(s) | 2126, 2690 |
| TaaI | ACNGT | 5 cut(s) | 10, 216, 1211, 1501, 2669 |
| TaiI | ACGT | 1 cut(s) | 460 |
| TaqI | TCGA | 6 cut(s) | 236, 1156, 1182, 1347, 1537, 1612 |
| TatI | WGTACW | 1 cut(s) | 1709 |
| TauI | GCSGC | 1 cut(s) | 140 |
| TfiI | GAWTC | 7 cut(s) | 275, 642, 1467, 2050, 2290, 2614, 2854 |
| TscAI | CASTG | 7 cut(s) | 13, 491, 541, 823, 901, 1477, 2793 |
| TseFI | GTSAC | 1 cut(s) | 1577 |
| TseI | GCWGC | 4 cut(s) | 16, 509, 746, 2322 |
| Tsp45I | GTSAC | 1 cut(s) | 1577 |
| TspDTI | ATGAA | 7 cut(s) | 45, 647, 761, 1068, 1745, 2176, 2882 |
| TspGWI | ACGGA | 1 cut(s) | 605 |
| TspRI | CASTG | 7 cut(s) | 13, 491, 541, 823, 901, 1477, 2793 |
| VpaK11BI | GGWCC | 2 cut(s) | 979, 1019 |
| XapI | RAATTY | 4 cut(s) | 711, 768, 2183, 2747 |
| XceI | RCATGY | 4 cut(s) | 341, 377, 781, 1145 |
| XmnI | GAANNNNTTC | 3 cut(s) | 597, 646, 2889 |
| XspI | CTAG | 7 cut(s) | 617, 836, 1226, 1355, 1701, 1871, 2435 |
| Zsp2I | ATGCAT | 1 cut(s) | 1527 |