RchiOBHm_Chr7g0241291

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000055
Physical Location & Seq
Reverse (-)
67321042 .. 67324881
3840 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21623

Sequence Viewer

Length: 1623 bp
ATGCTTAAGAAGCTGAAGATTCTAAATCTCAGTCATTCGCATTACCTGAGACAATCACCAGACTTTTCAAAACTTCCGAACCTCGAGAAATTGATACTCAAAGGCTGTAAGAGTTTGTCTGAGGTTCACCAGTCCATTGGAGATCTTGAAGGACTTGCTGTGGTAAATCTTCAAGACTGTAAGATGCTCAGGGAGCTCCCAGTAACTTTCTCCAAGTTGAAAGCTATTGAAACTCTTATTCTTTCTGGCTGTGCAAAATTTGAAAAGTTGACTAAGGACTTAGGTGAGATGGTATCCTTGAGAACTCTGCTAGCAGAGGACACAGCCATAAGAGAAATACCATCTTCCATAACACAGTTGAAAAACCTTGAATATTTACATCTATGTGGCCTGAACCAACCACCATCTAAATGGTTTGTGACTAGCTTCTGGTCTCATCTGTTGCCAAGAAGATGTGTTAAATTTCCTCCATCCTTATCAGGTTTATACGCTTTAAAAGAGTTGTATGTTAGAGACTGCAATTTAACAGACAGTTCAATGCCTAAGGATATTGGGAGTCTATCTTCTTTGGAAGAATTGGATCTTGGAGGAAACTGTTTTGGTAGCCTTCCATGTCTCGGTGGTCTTTGCAAGCTTCAATATCTCACATTGGATAGTTGCAATTTAACTGAAGCAGCAATTGAAGCTACGAATCTTTGGAGTCTACCATCTCTAGATTATTTGGATCTAAGTTGCAATAGTTTTCGTAGCCTTCCCAGCCTCAGTGGACTTTCCGAGCTAGAGACTCTAAATTTGGATAATTGCAAAAGTCTCTATGCAATGCCAGAATTACCAATAAATTTGGCTGTGCTGAAAGCAGATGGTTGCACTGCACTGGAAAGAATGCCAGATTTTTCAGAAATGTCGAGATTGTGTTGGTTGAATCTCAGACATTCTTCCAAACTAATTGAGATTCCCGGCTTGGATAAGTCATCCAAGACCATGCTACATATTGAAATGCAAGGGTGCACAAATATCAGTGAAACTGTTCGGGAGAGCATACTACTACAGGGTTGGAGTTATGCTAGCAACTATCATGGCATTTATCTCCCAGGAAATGACATTCCTGAGTGGTTCACATATGTCAATGATGGTGGCCGAGTCTCTTTTCAAGTGCCTCAAAATGTTGGCTGTGACCTAAAAGCATTGACCGTGTGCATCACTTATTCTTGTTTTTCAAACAGTCAATCTTTCAATTATATTTCCATATATGTTATAAATCATACCAAGCTCACTAGTTTTTTCATCCAACCATCGAAACCCAAGGACATTATTTCCAGTGGAGTTATTTGGCAGGGACGTTTGTCAAACAGAATGTTTAATTTGGAAGGTGGAGACTTCGTAGAGGTTTGTGTAGCGATTAATTCTTGCTTCCAAGTGAAGAAAATAGGGGTCAATCTTGTCTTGGACGGATCTATCGAAATTCAGCCGCATGCGTGTGAATCTCTCCCATATGCGTATTTTCGTCGTGACAAAGATGATGAGGGAGAAATCACATCCGAAAGAGGACTTGCTGATAATGTGGCAGGACCAAGCCATTACTCATTTCATTCCAGTAGTGGAGTACAGATGAATTATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

540

Amino Acids

60.22

Weight (kDa)

5.72

Isoelectric Point (pI)

52.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 160 - 266 4.3e-07 Leucine-rich repeat region
LRR_8 PF13855 233 - 268 9e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1256
AccI GTMKAC 1 cut(s) 703
AciI CCGC 1 cut(s) 1469
AclWI GGATC 3 cut(s) 588, 732, 1459
AcoI YGGCCR 1 cut(s) 1135
AcsI RAATTY 5 cut(s) 257, 461, 790, 838, 1461
AcuI CTGAAG 2 cut(s) 35, 690
AfaI GTAC 1 cut(s) 1605
AfiI CCNNNNNNNGG 1 cut(s) 617
AflII CTTAAG 1 cut(s) 5
AhlI ACTAGT 1 cut(s) 1274
AjnI CCWGG 1 cut(s) 1090
AjuI GAANNNNNNNTTGG 2 cut(s) 567, 599
AluBI AGCT 8 cut(s) 13, 196, 224, 426, 634, 686, 778, 1270
AluI AGCT 8 cut(s) 13, 196, 224, 426, 634, 686, 778, 1270
Alw21I GWGCWC 2 cut(s) 198, 1010
Alw26I GTCTC 8 cut(s) 43, 438, 507, 620, 776, 815, 1147, 1368
Alw44I GTGCAC 1 cut(s) 1006
AlwI GGATC 3 cut(s) 588, 732, 1459
Ama87I CYCGRG 1 cut(s) 83
AoxI GGCC 2 cut(s) 388, 1135
ApaLI GTGCAC 1 cut(s) 1006
ApeKI GCWGC 1 cut(s) 674
ApoI RAATTY 5 cut(s) 257, 461, 790, 838, 1461
ArsI GACNNNNNNTTYG 2 cut(s) 775, 807
AseI ATTAAT 1 cut(s) 1401
Asp700I GAANNNNTTC 1 cut(s) 1026
AspS9I GGNCC 1 cut(s) 1568
AsuC2I CCSGG 1 cut(s) 957
AsuHPI GGTGA 3 cut(s) 48, 119, 296
AsuNHI GCTAGC 2 cut(s) 310, 1064
AvaI CYCGRG 1 cut(s) 83
AvaII GGWCC 1 cut(s) 1568
AxyI CCTNAGG 1 cut(s) 543
BaeGI GKGCMC 1 cut(s) 1010
BanII GRGCYC 1 cut(s) 198
Bbv12I GWGCWC 2 cut(s) 198, 1010
BbvI GCAGC 1 cut(s) 686
BccI CCATC 8 cut(s) 283, 349, 412, 478, 715, 854, 1124, 1300
BciT130I CCWGG 1 cut(s) 1092
BciVI GTATCC 1 cut(s) 304
BcnI CCSGG 1 cut(s) 957
BcoDI GTCTC 8 cut(s) 43, 438, 507, 620, 776, 815, 1147, 1368
BcuI ACTAGT 1 cut(s) 1274
BfaI CTAG 6 cut(s) 311, 423, 713, 779, 1065, 1275
BfmI CTRYAG 1 cut(s) 1046
BfrI CTTAAG 1 cut(s) 5
BfuI GTATCC 1 cut(s) 304
BglII AGATCT 1 cut(s) 142
BisI GCNGC 2 cut(s) 675, 1469
BlsI GCNGC 2 cut(s) 676, 1470
Bme1390I CCNGG 2 cut(s) 957, 1092
Bme18I GGWCC 1 cut(s) 1568
BmeT110I CYCGRG 1 cut(s) 83
BmgT120I GGNCC 1 cut(s) 1568
BmrFI CCNGG 2 cut(s) 957, 1092
BmrI ACTGGG 1 cut(s) 194
BmsI GCATC 2 cut(s) 174, 1206
BmtI GCTAGC 2 cut(s) 314, 1068
BmuI ACTGGG 1 cut(s) 194
BoxI GACNNNNGTC 1 cut(s) 1342
Bpu10I CCTNAGC 1 cut(s) 188
BpuEI CTTGAG 1 cut(s) 319
BpuMI CCSGG 1 cut(s) 957
BsaI GGTCTC 1 cut(s) 438
BsaJI CCNNGG 2 cut(s) 1090, 1302
BsaXI ACNNNNNCTCC 2 cut(s) 1365, 1395
Bsc4I CCNNNNNNNGG 1 cut(s) 617
Bse1I ACTGG 5 cut(s) 130, 200, 879, 1317, 1593
Bse21I CCTNAGG 1 cut(s) 543
Bse3DI GCAATG 1 cut(s) 825
BseBI CCWGG 1 cut(s) 1092
BseDI CCNNGG 2 cut(s) 1090, 1302
BseGI GGATG 4 cut(s) 470, 971, 1284, 1535
BseLI CCNNNNNNNGG 1 cut(s) 617
BseMI GCAATG 1 cut(s) 825
BseMII CTCAG 7 cut(s) 38, 43, 111, 202, 775, 940, 1098
BseNI ACTGG 5 cut(s) 130, 200, 879, 1317, 1593
BseSI GKGCMC 1 cut(s) 1010
BseXI GCAGC 1 cut(s) 686
BseYI CCCAGC 1 cut(s) 755
BsgI GTGCAG 1 cut(s) 855
BshFI GGCC 2 cut(s) 390, 1137
BsiHKAI GWGCWC 2 cut(s) 198, 1010
BsiHKCI CYCGRG 1 cut(s) 83
BsiSI CCGG 1 cut(s) 957
BslFI GGGAC 1 cut(s) 1350
BslI CCNNNNNNNGG 1 cut(s) 617
BsmAI GTCTC 8 cut(s) 43, 438, 507, 620, 776, 815, 1147, 1368
BsmFI GGGAC 1 cut(s) 1350
BsmI GAATGC 1 cut(s) 888
BsnI GGCC 2 cut(s) 390, 1137
Bso31I GGTCTC 1 cut(s) 438
BsoBI CYCGRG 1 cut(s) 83
Bsp1286I GDGCHC 2 cut(s) 198, 1010
Bsp143I GATC 4 cut(s) 142, 580, 724, 1451
BspACI CCGC 1 cut(s) 1469
BspANI GGCC 2 cut(s) 390, 1137
BspCNI CTCAG 7 cut(s) 39, 42, 112, 201, 774, 939, 1099
BspOI GCTAGC 2 cut(s) 314, 1068
BspPI GGATC 3 cut(s) 588, 732, 1459
BspTI CTTAAG 1 cut(s) 5
BspTNI GGTCTC 1 cut(s) 438
BsrDI GCAATG 1 cut(s) 825
BsrI ACTGG 5 cut(s) 130, 200, 879, 1317, 1593
BssECI CCNNGG 2 cut(s) 1090, 1302
BssMI GATC 4 cut(s) 142, 580, 724, 1451
BssT1I CCWWGG 1 cut(s) 1302
Bst2UI CCWGG 1 cut(s) 1092
Bst4CI ACNGT 7 cut(s) 179, 357, 533, 596, 1027, 1192, 1223
BstAFI CTTAAG 1 cut(s) 5
BstC8I GCNNGC 4 cut(s) 312, 632, 1066, 1473
BstF5I GGATG 4 cut(s) 470, 971, 1284, 1535
BstKTI GATC 4 cut(s) 145, 583, 727, 1454
BstMAI GTCTC 8 cut(s) 43, 438, 507, 620, 776, 815, 1147, 1368
BstMBI GATC 4 cut(s) 142, 580, 724, 1451
BstMWI GCNNNNNNNGC 4 cut(s) 10, 193, 683, 756
BstNI CCWGG 1 cut(s) 1092
BstNSI RCATGY 1 cut(s) 1475
BstPAI GACNNNNGTC 1 cut(s) 1342
BstSCI CCNGG 2 cut(s) 955, 1090
BstSFI CTRYAG 1 cut(s) 1046
BstSLI GKGCMC 1 cut(s) 1010
BstV1I GCAGC 1 cut(s) 686
BstX2I RGATCY 4 cut(s) 142, 580, 724, 1451
BstXI CCANNNNNNTGG 2 cut(s) 137, 411
BstYI RGATCY 4 cut(s) 142, 580, 724, 1451
Bsu36I CCTNAGG 1 cut(s) 543
BsuI GTATCC 1 cut(s) 304
BsuRI GGCC 2 cut(s) 390, 1137
BtsCI GGATG 4 cut(s) 470, 971, 1284, 1535
BtsI GCAGTG 1 cut(s) 867
BtsIMutI CAGTG 5 cut(s) 769, 867, 872, 1024, 1324
Cac8I GCNNGC 4 cut(s) 312, 632, 1066, 1473
Cfr13I GGNCC 1 cut(s) 1568
Csp6I GTAC 1 cut(s) 1604
CspCI CAANNNNNGTGG 2 cut(s) 1114, 1149
CviAII CATG 4 cut(s) 612, 982, 1076, 1472
CviQI GTAC 1 cut(s) 1604
DpnI GATC 4 cut(s) 144, 582, 726, 1453
DpnII GATC 4 cut(s) 142, 580, 724, 1451
DraI TTTAAA 1 cut(s) 495
EaeI YGGCCR 1 cut(s) 1135
Ecl136II GAGCTC 1 cut(s) 196
Eco130I CCWWGG 1 cut(s) 1302
Eco24I GRGCYC 1 cut(s) 198
Eco31I GGTCTC 1 cut(s) 438
Eco47I GGWCC 1 cut(s) 1568
Eco53kI GAGCTC 1 cut(s) 196
Eco57I CTGAAG 2 cut(s) 35, 690
Eco81I CCTNAGG 1 cut(s) 543
Eco88I CYCGRG 1 cut(s) 83
EcoICRI GAGCTC 1 cut(s) 196
EcoRII CCWGG 1 cut(s) 1090
EcoT14I CCWWGG 1 cut(s) 1302
EcoT38I GRGCYC 1 cut(s) 198
ErhI CCWWGG 1 cut(s) 1302
FaeI CATG 4 cut(s) 615, 985, 1079, 1475
FaqI GGGAC 1 cut(s) 1350
FatI CATG 4 cut(s) 611, 981, 1075, 1471
FauNDI CATATG 2 cut(s) 1120, 1492
FblI GTMKAC 1 cut(s) 703
Fnu4HI GCNGC 2 cut(s) 675, 1469
FokI GGATG 4 cut(s) 457, 958, 1271, 1522
FriOI GRGCYC 1 cut(s) 198
Fsp4HI GCNGC 2 cut(s) 675, 1469
FspBI CTAG 6 cut(s) 311, 423, 713, 779, 1065, 1275
GluI GCNGC 2 cut(s) 675, 1469
GsaI CCCAGC 1 cut(s) 759
HaeIII GGCC 2 cut(s) 390, 1137
HapII CCGG 1 cut(s) 957
Hin1II CATG 4 cut(s) 615, 985, 1079, 1475
HincII GTYRAC 1 cut(s) 270
HindII GTYRAC 1 cut(s) 270
HindIII AAGCTT 1 cut(s) 632
HinfI GANTC 9 cut(s) 19, 556, 691, 700, 784, 922, 952, 1140, 1481
HpaII CCGG 1 cut(s) 957
HphI GGTGA 3 cut(s) 48, 119, 296
Hpy166II GTNNAC 6 cut(s) 127, 270, 704, 767, 1008, 1116
Hpy188I TCNGA 6 cut(s) 78, 121, 775, 898, 929, 1540
Hpy188III TCNNGA 8 cut(s) 85, 146, 173, 713, 906, 1031, 1106, 1508
Hpy8I GTNNAC 6 cut(s) 127, 270, 704, 767, 1008, 1116
Hpy99I CGWCG 1 cut(s) 1509
HpyAV CCTTC 4 cut(s) 143, 617, 761, 1361
HpyCH4III ACNGT 7 cut(s) 179, 357, 533, 596, 1027, 1192, 1223
HpyCH4IV ACGT 1 cut(s) 1339
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 193, 683, 756
HpySE526I ACGT 1 cut(s) 1339
Hsp92II CATG 4 cut(s) 615, 985, 1079, 1475
Kzo9I GATC 4 cut(s) 142, 580, 724, 1451
LmnI GCTCC 2 cut(s) 193, 201
Lsp1109I GCAGC 1 cut(s) 686
LweI GCATC 2 cut(s) 174, 1206
MaeI CTAG 6 cut(s) 311, 423, 713, 779, 1065, 1275
MaeII ACGT 1 cut(s) 1339
MaeIII GTNAC 4 cut(s) 202, 418, 1172, 1508
MalI GATC 4 cut(s) 144, 582, 726, 1453
MboI GATC 4 cut(s) 142, 580, 724, 1451
MboII GAAGA 8 cut(s) 28, 161, 336, 462, 555, 584, 927, 1432
MfeI CAATTG 1 cut(s) 678
MflI RGATCY 4 cut(s) 142, 580, 724, 1451
MhlI GDGCHC 2 cut(s) 198, 1010
MlyI GAGTC 4 cut(s) 565, 709, 778, 1149
MmeI TCCRAC 2 cut(s) 1034, 1312
MroXI GAANNNNTTC 1 cut(s) 1026
MseI TTAA 7 cut(s) 6, 459, 494, 524, 665, 1359, 1401
MslI CAYNNNNRTG 3 cut(s) 384, 409, 1476
MspCI CTTAAG 1 cut(s) 5
MspI CCGG 1 cut(s) 957
MspR9I CCNGG 2 cut(s) 957, 1092
MunI CAATTG 1 cut(s) 678
Mva1269I GAATGC 1 cut(s) 888
MvaI CCWGG 1 cut(s) 1092
MwoI GCNNNNNNNGC 4 cut(s) 10, 193, 683, 756
NciI CCSGG 1 cut(s) 957
NdeI CATATG 2 cut(s) 1120, 1492
NdeII GATC 4 cut(s) 142, 580, 724, 1451
NheI GCTAGC 2 cut(s) 310, 1064
NlaIII CATG 4 cut(s) 615, 985, 1079, 1475
NmeAIII GCCGAG 1 cut(s) 1163
NmuCI GTSAC 3 cut(s) 418, 1172, 1508
NspI RCATGY 1 cut(s) 1475
PaeI GCATGC 1 cut(s) 1475
PaeR7I CTCGAG 1 cut(s) 83
PcsI WCGNNNNNNNCGW 1 cut(s) 1455
PctI GAATGC 1 cut(s) 888
PdmI GAANNNNTTC 1 cut(s) 1026
PfeI GAWTC 5 cut(s) 19, 691, 922, 952, 1481
PkrI GCNGC 2 cut(s) 676, 1470
PleI GAGTC 4 cut(s) 564, 708, 778, 1148
PpsI GAGTC 4 cut(s) 564, 708, 778, 1148
PshAI GACNNNNGTC 1 cut(s) 1342
PshBI ATTAAT 1 cut(s) 1401
PsiI TTATAA 1 cut(s) 1256
Psp124BI GAGCTC 1 cut(s) 198
Psp6I CCWGG 1 cut(s) 1090
PspFI CCCAGC 1 cut(s) 755
PspGI CCWGG 1 cut(s) 1090
PspPI GGNCC 1 cut(s) 1568
PsuI RGATCY 4 cut(s) 142, 580, 724, 1451
RsaI GTAC 1 cut(s) 1605
RsaNI GTAC 1 cut(s) 1604
RseI CAYNNNNRTG 3 cut(s) 384, 409, 1476
SacI GAGCTC 1 cut(s) 198
SaqAI TTAA 7 cut(s) 6, 459, 494, 524, 665, 1359, 1401
SatI GCNGC 2 cut(s) 675, 1469
Sau3AI GATC 4 cut(s) 142, 580, 724, 1451
Sau96I GGNCC 1 cut(s) 1568
SchI GAGTC 4 cut(s) 565, 709, 778, 1149
ScrFI CCNGG 2 cut(s) 957, 1092
SduI GDGCHC 2 cut(s) 198, 1010
SfaNI GCATC 2 cut(s) 174, 1206
SfcI CTRYAG 1 cut(s) 1046
Sfr274I CTCGAG 1 cut(s) 83
SinI GGWCC 1 cut(s) 1568
SlaI CTCGAG 1 cut(s) 83
SmiMI CAYNNNNRTG 3 cut(s) 384, 409, 1476
SmlI CTYRAG 3 cut(s) 5, 83, 298
SmoI CTYRAG 3 cut(s) 5, 83, 298
SpeI ACTAGT 1 cut(s) 1274
SphI GCATGC 1 cut(s) 1475
SsiI CCGC 1 cut(s) 1469
SspI AATATT 1 cut(s) 374
SspMI CTAG 6 cut(s) 311, 423, 713, 779, 1065, 1275
SstI GAGCTC 1 cut(s) 198
StyD4I CCNGG 2 cut(s) 955, 1090
StyI CCWWGG 1 cut(s) 1302
TaaI ACNGT 7 cut(s) 179, 357, 533, 596, 1027, 1192, 1223
TaiI ACGT 1 cut(s) 1342
TaqI TCGA 4 cut(s) 84, 905, 1295, 1458
TatI WGTACW 1 cut(s) 1603
TauI GCSGC 1 cut(s) 1471
TfiI GAWTC 5 cut(s) 19, 691, 922, 952, 1481
Tru1I TTAA 7 cut(s) 6, 459, 494, 524, 665, 1359, 1401
Tru9I TTAA 7 cut(s) 6, 459, 494, 524, 665, 1359, 1401
TscAI CASTG 5 cut(s) 769, 874, 879, 1024, 1324
TseFI GTSAC 3 cut(s) 418, 1172, 1508
TseI GCWGC 1 cut(s) 674
Tsp45I GTSAC 3 cut(s) 418, 1172, 1508
TspDTI ATGAA 2 cut(s) 1273, 1577
TspGWI ACGGA 1 cut(s) 1464
TspRI CASTG 5 cut(s) 769, 874, 879, 1024, 1324
Vha464I CTTAAG 1 cut(s) 5
VneI GTGCAC 1 cut(s) 1006
VpaK11BI GGWCC 1 cut(s) 1568
VspI ATTAAT 1 cut(s) 1401
XapI RAATTY 5 cut(s) 257, 461, 790, 838, 1461
XbaI TCTAGA 1 cut(s) 712
XceI RCATGY 1 cut(s) 1475
XcmI CCANNNNNNNNNTGG 1 cut(s) 408
XhoI CTCGAG 1 cut(s) 83
XmiI GTMKAC 1 cut(s) 703
XmnI GAANNNNTTC 1 cut(s) 1026
XspI CTAG 6 cut(s) 311, 423, 713, 779, 1065, 1275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.