TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 133 - 202 | 7.2e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 407 - 563 | 1.9e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 557 - 660 | 3e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 581 - 670 | 5.7e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 665 - 820 | 8.3e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 849 - 997 | 6.1e-15 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 865 - 922 | 8.9e-06 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1146 |
| AciI | CCGC | 2 cut(s) | 1351, 2125 |
| AclWI | GGATC | 2 cut(s) | 2796, 2829 |
| AcsI | RAATTY | 3 cut(s) | 1220, 1781, 2555 |
| AcuI | CTGAAG | 1 cut(s) | 705 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1097, 1661, 1874, 2435 |
| AhlI | ACTAGT | 3 cut(s) | 904, 1468, 2242 |
| AjnI | CCWGG | 3 cut(s) | 64, 616, 2979 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 305, 337 |
| Alw21I | GWGCWC | 2 cut(s) | 1368, 2142 |
| Alw26I | GTCTC | 7 cut(s) | 226, 769, 1187, 1692, 1748, 1961, 2861 |
| AlwI | GGATC | 2 cut(s) | 2796, 2829 |
| ApoI | RAATTY | 3 cut(s) | 1220, 1781, 2555 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2697 |
| AspS9I | GGNCC | 3 cut(s) | 62, 451, 1417 |
| AsuC2I | CCSGG | 1 cut(s) | 2963 |
| AsuII | TTCGAA | 1 cut(s) | 2552 |
| AvaII | GGWCC | 3 cut(s) | 62, 451, 1417 |
| AxyI | CCTNAGG | 1 cut(s) | 2784 |
| BanII | GRGCYC | 2 cut(s) | 1368, 2142 |
| BauI | CACGAG | 1 cut(s) | 90 |
| BbsI | GAAGAC | 1 cut(s) | 2199 |
| Bbv12I | GWGCWC | 2 cut(s) | 1368, 2142 |
| BccI | CCATC | 2 cut(s) | 8, 341 |
| BceAI | ACGGC | 2 cut(s) | 815, 2737 |
| BciT130I | CCWGG | 3 cut(s) | 66, 618, 2981 |
| BcnI | CCSGG | 1 cut(s) | 2963 |
| BcoDI | GTCTC | 7 cut(s) | 226, 769, 1187, 1692, 1748, 1961, 2861 |
| BcuI | ACTAGT | 3 cut(s) | 904, 1468, 2242 |
| BfaI | CTAG | 9 cut(s) | 161, 260, 389, 582, 735, 905, 1271, 1469, 2243 |
| BfmI | CTRYAG | 1 cut(s) | 2885 |
| BlpI | GCTNAGC | 1 cut(s) | 1839 |
| Bme1390I | CCNGG | 4 cut(s) | 66, 618, 2963, 2981 |
| Bme18I | GGWCC | 3 cut(s) | 62, 451, 1417 |
| BmgT120I | GGNCC | 3 cut(s) | 62, 451, 1417 |
| BmiI | GGNNCC | 5 cut(s) | 955, 1418, 1519, 2293, 2978 |
| BmrFI | CCNGG | 4 cut(s) | 66, 618, 2963, 2981 |
| BmrI | ACTGGG | 1 cut(s) | 2847 |
| BmsI | GCATC | 6 cut(s) | 512, 909, 1362, 1473, 2136, 2247 |
| BmuI | ACTGGG | 1 cut(s) | 2847 |
| BpiI | GAAGAC | 1 cut(s) | 2199 |
| BpmI | CTGGAG | 1 cut(s) | 2963 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1839 |
| Bpu14I | TTCGAA | 1 cut(s) | 2552 |
| BpuEI | CTTGAG | 1 cut(s) | 2126 |
| BpuMI | CCSGG | 1 cut(s) | 2963 |
| BsaBI | GATNNNNATC | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 5 cut(s) | 616, 1163, 1724, 1937, 2498 |
| BsaWI | WCCGGW | 3 cut(s) | 1018, 1582, 2356 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2961, 2991 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1097, 1661, 1874, 2435 |
| Bse1I | ACTGG | 3 cut(s) | 939, 1503, 2853 |
| Bse21I | CCTNAGG | 1 cut(s) | 2784 |
| Bse8I | GATNNNNATC | 1 cut(s) | 99 |
| BseBI | CCWGG | 3 cut(s) | 66, 618, 2981 |
| BseDI | CCNNGG | 5 cut(s) | 616, 1163, 1724, 1937, 2498 |
| BseGI | GGATG | 1 cut(s) | 1142 |
| BseJI | GATNNNNATC | 1 cut(s) | 99 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1097, 1661, 1874, 2435 |
| BseNI | ACTGG | 3 cut(s) | 939, 1503, 2853 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1368, 2142 |
| BsiSI | CCGG | 4 cut(s) | 1019, 1583, 2357, 2963 |
| BslFI | GGGAC | 4 cut(s) | 1019, 1430, 1583, 2284 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1097, 1661, 1874, 2435 |
| BsmAI | GTCTC | 7 cut(s) | 226, 769, 1187, 1692, 1748, 1961, 2861 |
| BsmFI | GGGAC | 4 cut(s) | 1019, 1430, 1583, 2284 |
| Bsp119I | TTCGAA | 1 cut(s) | 2552 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1368, 2142 |
| Bsp143I | GATC | 5 cut(s) | 985, 1549, 2323, 2788, 2821 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1839 |
| BspACI | CCGC | 2 cut(s) | 1351, 2125 |
| BspLI | GGNNCC | 5 cut(s) | 955, 1418, 1519, 2293, 2978 |
| BspMAI | CTGCAG | 1 cut(s) | 2889 |
| BspPI | GGATC | 2 cut(s) | 2796, 2829 |
| BspT104I | TTCGAA | 1 cut(s) | 2552 |
| BsrI | ACTGG | 3 cut(s) | 939, 1503, 2853 |
| BssECI | CCNNGG | 5 cut(s) | 616, 1163, 1724, 1937, 2498 |
| BssMI | GATC | 5 cut(s) | 985, 1549, 2323, 2788, 2821 |
| BssSI | CACGAG | 1 cut(s) | 90 |
| BssT1I | CCWWGG | 4 cut(s) | 1163, 1724, 1937, 2498 |
| Bst2BI | CACGAG | 1 cut(s) | 90 |
| Bst2UI | CCWGG | 3 cut(s) | 66, 618, 2981 |
| Bst6I | CTCTTC | 9 cut(s) | 1041, 1164, 1203, 1605, 1725, 1764, 1938, 1977, 2499 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 565 |
| BstBI | TTCGAA | 1 cut(s) | 2552 |
| BstC8I | GCNNGC | 1 cut(s) | 180 |
| BstEII | GGTNACC | 1 cut(s) | 611 |
| BstF5I | GGATG | 1 cut(s) | 1142 |
| BstKTI | GATC | 5 cut(s) | 988, 1552, 2326, 2791, 2824 |
| BstMAI | GTCTC | 7 cut(s) | 226, 769, 1187, 1692, 1748, 1961, 2861 |
| BstMBI | GATC | 5 cut(s) | 985, 1549, 2323, 2788, 2821 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 565 |
| BstNI | CCWGG | 3 cut(s) | 66, 618, 2981 |
| BstNSI | RCATGY | 2 cut(s) | 182, 2954 |
| BstPI | GGTNACC | 1 cut(s) | 611 |
| BstSCI | CCNGG | 4 cut(s) | 64, 616, 2961, 2979 |
| BstSFI | CTRYAG | 1 cut(s) | 2885 |
| BstV2I | GAAGAC | 1 cut(s) | 2199 |
| BstX2I | RGATCY | 2 cut(s) | 2788, 2821 |
| BstYI | RGATCY | 2 cut(s) | 2788, 2821 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2784 |
| BtsCI | GGATG | 1 cut(s) | 1142 |
| BtsI | GCAGTG | 3 cut(s) | 929, 1493, 2267 |
| Cac8I | GCNNGC | 1 cut(s) | 180 |
| Cfr13I | GGNCC | 3 cut(s) | 62, 451, 1417 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 290, 325 |
| CviAII | CATG | 7 cut(s) | 179, 560, 1235, 1796, 2009, 2570, 2951 |
| DpnI | GATC | 5 cut(s) | 987, 1551, 2325, 2790, 2823 |
| DpnII | GATC | 5 cut(s) | 985, 1549, 2323, 2788, 2821 |
| DraI | TTTAAA | 2 cut(s) | 867, 2205 |
| Eam1104I | CTCTTC | 9 cut(s) | 1041, 1164, 1203, 1605, 1725, 1764, 1938, 1977, 2499 |
| EarI | CTCTTC | 9 cut(s) | 1041, 1164, 1203, 1605, 1725, 1764, 1938, 1977, 2499 |
| Ecl136II | GAGCTC | 2 cut(s) | 1366, 2140 |
| Eco130I | CCWWGG | 4 cut(s) | 1163, 1724, 1937, 2498 |
| Eco24I | GRGCYC | 2 cut(s) | 1368, 2142 |
| Eco32I | GATATC | 4 cut(s) | 1257, 1818, 2031, 2592 |
| Eco47I | GGWCC | 3 cut(s) | 62, 451, 1417 |
| Eco53kI | GAGCTC | 2 cut(s) | 1366, 2140 |
| Eco57I | CTGAAG | 1 cut(s) | 705 |
| Eco81I | CCTNAGG | 1 cut(s) | 2784 |
| Eco91I | GGTNACC | 1 cut(s) | 611 |
| EcoICRI | GAGCTC | 2 cut(s) | 1366, 2140 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1417 |
| EcoO65I | GGTNACC | 1 cut(s) | 611 |
| EcoRII | CCWGG | 3 cut(s) | 64, 616, 2979 |
| EcoRV | GATATC | 4 cut(s) | 1257, 1818, 2031, 2592 |
| EcoT14I | CCWWGG | 4 cut(s) | 1163, 1724, 1937, 2498 |
| EcoT22I | ATGCAT | 2 cut(s) | 184, 561 |
| EcoT38I | GRGCYC | 2 cut(s) | 1368, 2142 |
| ErhI | CCWWGG | 4 cut(s) | 1163, 1724, 1937, 2498 |
| FaeI | CATG | 7 cut(s) | 182, 563, 1238, 1799, 2012, 2573, 2954 |
| FaqI | GGGAC | 4 cut(s) | 1019, 1430, 1583, 2284 |
| FatI | CATG | 7 cut(s) | 178, 559, 1234, 1795, 2008, 2569, 2950 |
| FokI | GGATG | 1 cut(s) | 1149 |
| FriOI | GRGCYC | 2 cut(s) | 1368, 2142 |
| FspBI | CTAG | 9 cut(s) | 161, 260, 389, 582, 735, 905, 1271, 1469, 2243 |
| GsuI | CTGGAG | 1 cut(s) | 2963 |
| HapII | CCGG | 4 cut(s) | 1019, 1583, 2357, 2963 |
| Hin1II | CATG | 7 cut(s) | 182, 563, 1238, 1799, 2012, 2573, 2954 |
| HincII | GTYRAC | 1 cut(s) | 1991 |
| HindII | GTYRAC | 1 cut(s) | 1991 |
| HindIII | AAGCTT | 4 cut(s) | 1148, 1709, 1922, 2873 |
| HpaII | CCGG | 4 cut(s) | 1019, 1583, 2357, 2963 |
| Hpy166II | GTNNAC | 7 cut(s) | 118, 518, 1126, 1690, 1903, 1991, 2464 |
| Hpy188I | TCNGA | 4 cut(s) | 598, 1226, 2561, 2686 |
| Hpy8I | GTNNAC | 7 cut(s) | 118, 518, 1126, 1690, 1903, 1991, 2464 |
| HpyCH4IV | ACGT | 2 cut(s) | 507, 2755 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 565 |
| HpySE526I | ACGT | 2 cut(s) | 507, 2755 |
| Hsp92II | CATG | 7 cut(s) | 182, 563, 1238, 1799, 2012, 2573, 2954 |
| Kzo9I | GATC | 5 cut(s) | 985, 1549, 2323, 2788, 2821 |
| LmnI | GCTCC | 4 cut(s) | 927, 1491, 2265, 2982 |
| LweI | GCATC | 6 cut(s) | 512, 909, 1362, 1473, 2136, 2247 |
| MaeI | CTAG | 9 cut(s) | 161, 260, 389, 582, 735, 905, 1271, 1469, 2243 |
| MaeII | ACGT | 2 cut(s) | 507, 2755 |
| MaeIII | GTNAC | 6 cut(s) | 194, 529, 611, 652, 2477, 2715 |
| MalI | GATC | 5 cut(s) | 987, 1551, 2325, 2790, 2823 |
| MboI | GATC | 5 cut(s) | 985, 1549, 2323, 2788, 2821 |
| MfeI | CAATTG | 1 cut(s) | 320 |
| MflI | RGATCY | 2 cut(s) | 2788, 2821 |
| MhlI | GDGCHC | 2 cut(s) | 1368, 2142 |
| MlyI | GAGTC | 6 cut(s) | 649, 1189, 1750, 1963, 2806, 2960 |
| MmeI | TCCRAC | 1 cut(s) | 2387 |
| Mph1103I | ATGCAT | 2 cut(s) | 184, 561 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2697 |
| MspI | CCGG | 4 cut(s) | 1019, 1583, 2357, 2963 |
| MspR9I | CCNGG | 4 cut(s) | 66, 618, 2963, 2981 |
| MunI | CAATTG | 1 cut(s) | 320 |
| MvaI | CCWGG | 3 cut(s) | 66, 618, 2981 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 565 |
| NciI | CCSGG | 1 cut(s) | 2963 |
| NdeII | GATC | 5 cut(s) | 985, 1549, 2323, 2788, 2821 |
| NlaIII | CATG | 7 cut(s) | 182, 563, 1238, 1799, 2012, 2573, 2954 |
| NlaIV | GGNNCC | 5 cut(s) | 955, 1418, 1519, 2293, 2978 |
| NmuCI | GTSAC | 3 cut(s) | 611, 652, 2477 |
| NsiI | ATGCAT | 2 cut(s) | 184, 561 |
| NspI | RCATGY | 2 cut(s) | 182, 2954 |
| NspV | TTCGAA | 1 cut(s) | 2552 |
| PaeI | GCATGC | 1 cut(s) | 182 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2697 |
| PfeI | GAWTC | 9 cut(s) | 501, 1084, 1327, 1648, 2101, 2422, 2530, 2662, 2956 |
| PflFI | GACNNNGTC | 1 cut(s) | 1914 |
| PfoI | TCCNGGA | 2 cut(s) | 64, 2961 |
| PleI | GAGTC | 6 cut(s) | 648, 1189, 1750, 1963, 2805, 2960 |
| PpsI | GAGTC | 6 cut(s) | 648, 1189, 1750, 1963, 2805, 2960 |
| PpuMI | RGGWCCY | 1 cut(s) | 1417 |
| PsiI | TTATAA | 1 cut(s) | 1146 |
| Psp124BI | GAGCTC | 2 cut(s) | 1368, 2142 |
| Psp5II | RGGWCCY | 1 cut(s) | 1417 |
| Psp6I | CCWGG | 3 cut(s) | 64, 616, 2979 |
| PspEI | GGTNACC | 1 cut(s) | 611 |
| PspGI | CCWGG | 3 cut(s) | 64, 616, 2979 |
| PspN4I | GGNNCC | 5 cut(s) | 955, 1418, 1519, 2293, 2978 |
| PspPI | GGNCC | 3 cut(s) | 62, 451, 1417 |
| PspPPI | RGGWCCY | 1 cut(s) | 1417 |
| PstI | CTGCAG | 1 cut(s) | 2889 |
| PsuI | RGATCY | 2 cut(s) | 2788, 2821 |
| PsyI | GACNNNGTC | 1 cut(s) | 1914 |
| SacI | GAGCTC | 2 cut(s) | 1368, 2142 |
| Sau3AI | GATC | 5 cut(s) | 985, 1549, 2323, 2788, 2821 |
| Sau96I | GGNCC | 3 cut(s) | 62, 451, 1417 |
| SchI | GAGTC | 6 cut(s) | 649, 1189, 1750, 1963, 2806, 2960 |
| ScrFI | CCNGG | 4 cut(s) | 66, 618, 2963, 2981 |
| SduI | GDGCHC | 2 cut(s) | 1368, 2142 |
| SfaNI | GCATC | 6 cut(s) | 512, 909, 1362, 1473, 2136, 2247 |
| SfcI | CTRYAG | 1 cut(s) | 2885 |
| SfuI | TTCGAA | 1 cut(s) | 2552 |
| SinI | GGWCC | 3 cut(s) | 62, 451, 1417 |
| SmlI | CTYRAG | 1 cut(s) | 2141 |
| SmoI | CTYRAG | 1 cut(s) | 2141 |
| SpeI | ACTAGT | 3 cut(s) | 904, 1468, 2242 |
| SphI | GCATGC | 1 cut(s) | 182 |
| SsiI | CCGC | 2 cut(s) | 1351, 2125 |
| SspI | AATATT | 1 cut(s) | 141 |
| SspMI | CTAG | 9 cut(s) | 161, 260, 389, 582, 735, 905, 1271, 1469, 2243 |
| SstI | GAGCTC | 2 cut(s) | 1368, 2142 |
| StyD4I | CCNGG | 4 cut(s) | 64, 616, 2961, 2979 |
| StyI | CCWWGG | 4 cut(s) | 1163, 1724, 1937, 2498 |
| TaiI | ACGT | 2 cut(s) | 510, 2758 |
| TaqI | TCGA | 4 cut(s) | 571, 1216, 2418, 2552 |
| TaqII | GACCGA | 1 cut(s) | 1658 |
| TatI | WGTACW | 1 cut(s) | 743 |
| TfiI | GAWTC | 9 cut(s) | 501, 1084, 1327, 1648, 2101, 2422, 2530, 2662, 2956 |
| TseFI | GTSAC | 3 cut(s) | 611, 652, 2477 |
| Tsp45I | GTSAC | 3 cut(s) | 611, 652, 2477 |
| TspDTI | ATGAA | 8 cut(s) | 219, 773, 779, 1520, 1774, 2690, 2790, 2954 |
| TspGWI | ACGGA | 2 cut(s) | 413, 1094 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1914 |
| VpaK11BI | GGWCC | 3 cut(s) | 62, 451, 1417 |
| XapI | RAATTY | 3 cut(s) | 1220, 1781, 2555 |
| XbaI | TCTAGA | 1 cut(s) | 160 |
| XceI | RCATGY | 2 cut(s) | 182, 2954 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2697 |
| XspI | CTAG | 9 cut(s) | 161, 260, 389, 582, 735, 905, 1271, 1469, 2243 |
| Zsp2I | ATGCAT | 2 cut(s) | 184, 561 |