TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 164 |
| AbsI | CCTCGAGG | 1 cut(s) | 2903 |
| Acc65I | GGTACC | 2 cut(s) | 3146, 3263 |
| AccB1I | GGYRCC | 2 cut(s) | 3146, 3263 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2837 |
| AccBSI | CCGCTC | 1 cut(s) | 192 |
| AccI | GTMKAC | 2 cut(s) | 885, 1300 |
| AccII | CGCG | 1 cut(s) | 2699 |
| AciI | CCGC | 6 cut(s) | 88, 151, 190, 798, 1716, 1725 |
| AclWI | GGATC | 5 cut(s) | 641, 1178, 2397, 2700, 3211 |
| AcuI | CTGAAG | 3 cut(s) | 361, 1944, 3549 |
| AcyI | GRCGYC | 2 cut(s) | 161, 1879 |
| AdeI | CACNNNGTG | 1 cut(s) | 567 |
| AfeI | AGCGCT | 1 cut(s) | 710 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 421, 804, 1594, 2547, 2837, 3399, 3511 |
| AflII | CTTAAG | 1 cut(s) | 2384 |
| AflIII | ACRYGT | 1 cut(s) | 3309 |
| AjnI | CCWGG | 7 cut(s) | 1291, 1855, 2463, 2559, 3097, 3223, 3543 |
| Alw21I | GWGCWC | 2 cut(s) | 1401, 1555 |
| Alw26I | GTCTC | 2 cut(s) | 131, 2577 |
| Alw44I | GTGCAC | 1 cut(s) | 1551 |
| AlwI | GGATC | 5 cut(s) | 641, 1178, 2397, 2700, 3211 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2232, 3206 |
| Ama87I | CYCGRG | 1 cut(s) | 2903 |
| Aor51HI | AGCGCT | 1 cut(s) | 710 |
| AoxI | GGCC | 4 cut(s) | 409, 2581, 2770, 2908 |
| ApaLI | GTGCAC | 1 cut(s) | 1551 |
| ApeKI | GCWGC | 3 cut(s) | 251, 749, 3061 |
| AseI | ATTAAT | 1 cut(s) | 3384 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 401, 901, 1113, 1647, 1929, 2430, 2707 |
| Asp718I | GGTACC | 2 cut(s) | 3146, 3263 |
| AspLEI | GCGC | 2 cut(s) | 711, 2070 |
| AspS9I | GGNCC | 5 cut(s) | 135, 516, 784, 1289, 2908 |
| AsuC2I | CCSGG | 1 cut(s) | 3239 |
| AsuHPI | GGTGA | 7 cut(s) | 395, 595, 1103, 2598, 3151, 3403, 3559 |
| AvaI | CYCGRG | 1 cut(s) | 2903 |
| AvaII | GGWCC | 4 cut(s) | 135, 516, 784, 1289 |
| AxyI | CCTNAGG | 1 cut(s) | 2688 |
| BaeGI | GKGCMC | 1 cut(s) | 1555 |
| BanI | GGYRCC | 2 cut(s) | 3146, 3263 |
| BanII | GRGCYC | 1 cut(s) | 1401 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3204, 3236 |
| BauI | CACGAG | 2 cut(s) | 906, 2324 |
| BbsI | GAAGAC | 2 cut(s) | 393, 2052 |
| Bbv12I | GWGCWC | 2 cut(s) | 1401, 1555 |
| BbvI | GCAGC | 3 cut(s) | 238, 736, 3048 |
| BccI | CCATC | 7 cut(s) | 970, 1613, 1628, 1703, 2073, 2545, 3189 |
| BceAI | ACGGC | 1 cut(s) | 3676 |
| BciT130I | CCWGG | 7 cut(s) | 1293, 1857, 2465, 2561, 3099, 3225, 3545 |
| BclI | TGATCA | 1 cut(s) | 1179 |
| BcnI | CCSGG | 1 cut(s) | 3239 |
| BcoDI | GTCTC | 2 cut(s) | 131, 2577 |
| BfaI | CTAG | 8 cut(s) | 294, 849, 1493, 1934, 2141, 2279, 2870, 3143 |
| BfmI | CTRYAG | 1 cut(s) | 2156 |
| BfoI | RGCGCY | 1 cut(s) | 712 |
| BfrI | CTTAAG | 1 cut(s) | 2384 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2907 |
| BglII | AGATCT | 1 cut(s) | 2728 |
| BisI | GCNGC | 4 cut(s) | 252, 750, 1717, 3062 |
| BlsI | GCNGC | 4 cut(s) | 253, 751, 1718, 3063 |
| Bme1390I | CCNGG | 8 cut(s) | 1293, 1857, 2465, 2561, 3099, 3225, 3239, 3545 |
| Bme18I | GGWCC | 4 cut(s) | 135, 516, 784, 1289 |
| BmeT110I | CYCGRG | 1 cut(s) | 2903 |
| BmgT120I | GGNCC | 5 cut(s) | 135, 516, 784, 1289, 2908 |
| BmiI | GGNNCC | 5 cut(s) | 517, 785, 3148, 3248, 3265 |
| BmrFI | CCNGG | 8 cut(s) | 1293, 1857, 2465, 2561, 3099, 3225, 3239, 3545 |
| BmrI | ACTGGG | 1 cut(s) | 884 |
| BmsI | GCATC | 9 cut(s) | 950, 1342, 1785, 1879, 2769, 2812, 3018, 3048, 3333 |
| BmuI | ACTGGG | 1 cut(s) | 884 |
| BpiI | GAAGAC | 2 cut(s) | 393, 2052 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 736, 768 |
| BpmI | CTGGAG | 2 cut(s) | 1577, 2486 |
| BpuEI | CTTGAG | 6 cut(s) | 391, 526, 1150, 1415, 1441, 2942 |
| BpuMI | CCSGG | 1 cut(s) | 3239 |
| BsaAI | YACGTR | 4 cut(s) | 1835, 2032, 3717, 3729 |
| BsaBI | GATNNNNATC | 3 cut(s) | 645, 921, 3023 |
| BsaHI | GRCGYC | 2 cut(s) | 161, 1879 |
| BsaJI | CCNNGG | 7 cut(s) | 177, 1855, 2316, 2396, 2463, 2541, 3162 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 421, 804, 1594, 2547, 2837, 3399, 3511 |
| Bse1I | ACTGG | 7 cut(s) | 519, 890, 1021, 1560, 2071, 2740, 3465 |
| Bse21I | CCTNAGG | 1 cut(s) | 2688 |
| Bse3DI | GCAATG | 2 cut(s) | 425, 1380 |
| Bse8I | GATNNNNATC | 3 cut(s) | 645, 921, 3023 |
| BseBI | CCWGG | 7 cut(s) | 1293, 1857, 2465, 2561, 3099, 3225, 3545 |
| BseDI | CCNNGG | 7 cut(s) | 177, 1855, 2316, 2396, 2463, 2541, 3162 |
| BseJI | GATNNNNATC | 3 cut(s) | 645, 921, 3023 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 421, 804, 1594, 2547, 2837, 3399, 3511 |
| BseMI | GCAATG | 2 cut(s) | 425, 1380 |
| BseNI | ACTGG | 7 cut(s) | 519, 890, 1021, 1560, 2071, 2740, 3465 |
| BseRI | GAGGAG | 2 cut(s) | 108, 2426 |
| BseSI | GKGCMC | 1 cut(s) | 1555 |
| BseXI | GCAGC | 3 cut(s) | 238, 736, 3048 |
| BseYI | CCCAGC | 1 cut(s) | 780 |
| BsgI | GTGCAG | 3 cut(s) | 521, 755, 1857 |
| Bsh1236I | CGCG | 1 cut(s) | 2699 |
| BshFI | GGCC | 4 cut(s) | 411, 2583, 2772, 2910 |
| BshNI | GGYRCC | 2 cut(s) | 3146, 3263 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1401, 1555 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2903 |
| BsiSI | CCGG | 1 cut(s) | 3239 |
| BslFI | GGGAC | 4 cut(s) | 797, 1898, 2854, 3221 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 421, 804, 1594, 2547, 2837, 3399, 3511 |
| BsmAI | GTCTC | 2 cut(s) | 131, 2577 |
| BsmFI | GGGAC | 4 cut(s) | 797, 1898, 2854, 3221 |
| BsmI | GAATGC | 5 cut(s) | 901, 903, 1255, 3001, 3144 |
| BsnI | GGCC | 4 cut(s) | 411, 2583, 2772, 2910 |
| BsoBI | CYCGRG | 1 cut(s) | 2903 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1401, 1555 |
| Bsp1407I | TGTACA | 1 cut(s) | 599 |
| Bsp19I | CCATGG | 1 cut(s) | 2541 |
| Bsp68I | TCGCGA | 1 cut(s) | 2699 |
| BspACI | CCGC | 6 cut(s) | 88, 151, 190, 798, 1716, 1725 |
| BspANI | GGCC | 4 cut(s) | 411, 2583, 2772, 2910 |
| BspFNI | CGCG | 1 cut(s) | 2699 |
| BspHI | TCATGA | 1 cut(s) | 3343 |
| BspLI | GGNNCC | 5 cut(s) | 517, 785, 3148, 3248, 3265 |
| BspPI | GGATC | 5 cut(s) | 641, 1178, 2397, 2700, 3211 |
| BspQI | GCTCTTC | 1 cut(s) | 699 |
| BspT107I | GGYRCC | 2 cut(s) | 3146, 3263 |
| BspTI | CTTAAG | 1 cut(s) | 2384 |
| BsrBI | CCGCTC | 1 cut(s) | 192 |
| BsrDI | GCAATG | 2 cut(s) | 425, 1380 |
| BsrGI | TGTACA | 1 cut(s) | 599 |
| BsrI | ACTGG | 7 cut(s) | 519, 890, 1021, 1560, 2071, 2740, 3465 |
| BssECI | CCNNGG | 7 cut(s) | 177, 1855, 2316, 2396, 2463, 2541, 3162 |
| BssNAI | GTATAC | 1 cut(s) | 1301 |
| BssNI | GRCGYC | 2 cut(s) | 161, 1879 |
| BssSI | CACGAG | 2 cut(s) | 906, 2324 |
| BssT1I | CCWWGG | 3 cut(s) | 2396, 2541, 3162 |
| Bst1107I | GTATAC | 1 cut(s) | 1301 |
| Bst2BI | CACGAG | 2 cut(s) | 906, 2324 |
| Bst2UI | CCWGG | 7 cut(s) | 1293, 1857, 2465, 2561, 3099, 3225, 3545 |
| Bst6I | CTCTTC | 6 cut(s) | 325, 466, 699, 2436, 2981, 3392 |
| BstACI | GRCGYC | 2 cut(s) | 161, 1879 |
| BstAFI | CTTAAG | 1 cut(s) | 2384 |
| BstAUI | TGTACA | 1 cut(s) | 599 |
| BstBAI | YACGTR | 4 cut(s) | 1835, 2032, 3717, 3729 |
| BstC8I | GCNNGC | 3 cut(s) | 504, 1413, 2090 |
| BstDSI | CCRYGG | 1 cut(s) | 2541 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3509 |
| BstFNI | CGCG | 1 cut(s) | 2699 |
| BstH2I | RGCGCY | 1 cut(s) | 712 |
| BstHHI | GCGC | 2 cut(s) | 711, 2070 |
| BstMAI | GTCTC | 2 cut(s) | 131, 2577 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1795, 2907 |
| BstNI | CCWGG | 7 cut(s) | 1293, 1857, 2465, 2561, 3099, 3225, 3545 |
| BstNSI | RCATGY | 1 cut(s) | 1415 |
| BstSCI | CCNGG | 8 cut(s) | 1291, 1855, 2463, 2559, 3097, 3223, 3237, 3543 |
| BstSFI | CTRYAG | 1 cut(s) | 2156 |
| BstSLI | GKGCMC | 1 cut(s) | 1555 |
| BstSNI | TACGTA | 3 cut(s) | 2032, 3717, 3729 |
| BstUI | CGCG | 1 cut(s) | 2699 |
| BstV1I | GCAGC | 3 cut(s) | 238, 736, 3048 |
| BstV2I | GAAGAC | 2 cut(s) | 393, 2052 |
| BstX2I | RGATCY | 4 cut(s) | 2389, 2692, 2728, 3203 |
| BstYI | RGATCY | 4 cut(s) | 2389, 2692, 2728, 3203 |
| BstZ17I | GTATAC | 1 cut(s) | 1301 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2688 |
| BsuRI | GGCC | 4 cut(s) | 411, 2583, 2772, 2910 |
| BtgI | CCRYGG | 1 cut(s) | 2541 |
| BtsI | GCAGTG | 1 cut(s) | 2230 |
| BtsIMutI | CAGTG | 7 cut(s) | 209, 1553, 2047, 2230, 2299, 2492, 3131 |
| BtuMI | TCGCGA | 1 cut(s) | 2699 |
| Cac8I | GCNNGC | 3 cut(s) | 504, 1413, 2090 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2232, 3206 |
| CciI | TCATGA | 1 cut(s) | 3343 |
| CfoI | GCGC | 2 cut(s) | 711, 2070 |
| Cfr13I | GGNCC | 5 cut(s) | 135, 516, 784, 1289, 2908 |
| CseI | GACGC | 1 cut(s) | 1868 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1446, 1481 |
| DraI | TTTAAA | 1 cut(s) | 2637 |
| DraIII | CACNNNGTG | 1 cut(s) | 567 |
| Eam1104I | CTCTTC | 6 cut(s) | 325, 466, 699, 2436, 2981, 3392 |
| EarI | CTCTTC | 6 cut(s) | 325, 466, 699, 2436, 2981, 3392 |
| Ecl136II | GAGCTC | 1 cut(s) | 1399 |
| Eco105I | TACGTA | 3 cut(s) | 2032, 3717, 3729 |
| Eco130I | CCWWGG | 3 cut(s) | 2396, 2541, 3162 |
| Eco24I | GRGCYC | 1 cut(s) | 1401 |
| Eco32I | GATATC | 2 cut(s) | 1126, 3670 |
| Eco47I | GGWCC | 4 cut(s) | 135, 516, 784, 1289 |
| Eco47III | AGCGCT | 1 cut(s) | 710 |
| Eco53kI | GAGCTC | 1 cut(s) | 1399 |
| Eco57I | CTGAAG | 3 cut(s) | 361, 1944, 3549 |
| Eco81I | CCTNAGG | 1 cut(s) | 2688 |
| Eco88I | CYCGRG | 1 cut(s) | 2903 |
| EcoICRI | GAGCTC | 1 cut(s) | 1399 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3509 |
| EcoO109I | RGGNCCY | 2 cut(s) | 784, 2908 |
| EcoRI | GAATTC | 2 cut(s) | 106, 1572 |
| EcoRII | CCWGG | 7 cut(s) | 1291, 1855, 2463, 2559, 3097, 3223, 3543 |
| EcoRV | GATATC | 2 cut(s) | 1126, 3670 |
| EcoT14I | CCWWGG | 3 cut(s) | 2396, 2541, 3162 |
| EcoT22I | ATGCAT | 3 cut(s) | 903, 1282, 1800 |
| EcoT38I | GRGCYC | 1 cut(s) | 1401 |
| ErhI | CCWWGG | 3 cut(s) | 2396, 2541, 3162 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1098, 1130, 1377, 1409, 2634, 2666, 3438, 3470 |
| FaqI | GGGAC | 4 cut(s) | 797, 1898, 2854, 3221 |
| FauI | CCCGC | 1 cut(s) | 81 |
| FauNDI | CATATG | 4 cut(s) | 550, 3706, 3748, 3760 |
| FbaI | TGATCA | 1 cut(s) | 1179 |
| FblI | GTMKAC | 2 cut(s) | 885, 1300 |
| Fnu4HI | GCNGC | 4 cut(s) | 252, 750, 1717, 3062 |
| FriOI | GRGCYC | 1 cut(s) | 1401 |
| Fsp4HI | GCNGC | 4 cut(s) | 252, 750, 1717, 3062 |
| FspBI | CTAG | 8 cut(s) | 294, 849, 1493, 1934, 2141, 2279, 2870, 3143 |
| GlaI | GCGC | 2 cut(s) | 710, 2069 |
| GluI | GCNGC | 4 cut(s) | 252, 750, 1717, 3062 |
| GsaI | CCCAGC | 1 cut(s) | 784 |
| GsuI | CTGGAG | 2 cut(s) | 1577, 2486 |
| HaeII | RGCGCY | 1 cut(s) | 712 |
| HaeIII | GGCC | 4 cut(s) | 411, 2583, 2772, 2910 |
| HapII | CCGG | 1 cut(s) | 3239 |
| HgaI | GACGC | 1 cut(s) | 1868 |
| HhaI | GCGC | 2 cut(s) | 711, 2070 |
| Hin1I | GRCGYC | 2 cut(s) | 161, 1879 |
| Hin6I | GCGC | 2 cut(s) | 709, 2068 |
| HinP1I | GCGC | 2 cut(s) | 709, 2068 |
| HincII | GTYRAC | 4 cut(s) | 39, 187, 838, 3315 |
| HindII | GTYRAC | 4 cut(s) | 39, 187, 838, 3315 |
| HindIII | AAGCTT | 4 cut(s) | 762, 2178, 2918, 3435 |
| HpaI | GTTAAC | 1 cut(s) | 187 |
| HpaII | CCGG | 1 cut(s) | 3239 |
| HphI | GGTGA | 7 cut(s) | 395, 595, 1103, 2598, 3151, 3403, 3559 |
| Hpy99I | CGWCG | 3 cut(s) | 135, 163, 1884 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1795, 2907 |
| Hsp92I | GRCGYC | 2 cut(s) | 161, 1879 |
| HspAI | GCGC | 2 cut(s) | 709, 2068 |
| KpnI | GGTACC | 2 cut(s) | 3150, 3267 |
| Ksp22I | TGATCA | 1 cut(s) | 1179 |
| KspAI | GTTAAC | 1 cut(s) | 187 |
| LguI | GCTCTTC | 1 cut(s) | 699 |
| LmnI | GCTCC | 3 cut(s) | 1370, 1530, 1608 |
| Lsp1109I | GCAGC | 3 cut(s) | 238, 736, 3048 |
| LweI | GCATC | 9 cut(s) | 950, 1342, 1785, 1879, 2769, 2812, 3018, 3048, 3333 |
| MaeI | CTAG | 8 cut(s) | 294, 849, 1493, 1934, 2141, 2279, 2870, 3143 |
| MbiI | CCGCTC | 1 cut(s) | 192 |
| MfeI | CAATTG | 1 cut(s) | 2249 |
| MflI | RGATCY | 4 cut(s) | 2389, 2692, 2728, 3203 |
| MhlI | GDGCHC | 2 cut(s) | 1401, 1555 |
| MlyI | GAGTC | 6 cut(s) | 133, 1752, 2336, 2836, 3119, 3310 |
| MmeI | TCCRAC | 5 cut(s) | 154, 874, 943, 2044, 2532 |
| Mph1103I | ATGCAT | 3 cut(s) | 903, 1282, 1800 |
| MroXI | GAANNNNTTC | 7 cut(s) | 401, 901, 1113, 1647, 1929, 2430, 2707 |
| MslI | CAYNNNNRTG | 3 cut(s) | 906, 1965, 2235 |
| MspCI | CTTAAG | 1 cut(s) | 2384 |
| MspI | CCGG | 1 cut(s) | 3239 |
| MspR9I | CCNGG | 8 cut(s) | 1293, 1857, 2465, 2561, 3099, 3225, 3239, 3545 |
| MunI | CAATTG | 1 cut(s) | 2249 |
| Mva1269I | GAATGC | 5 cut(s) | 901, 903, 1255, 3001, 3144 |
| MvaI | CCWGG | 7 cut(s) | 1293, 1857, 2465, 2561, 3099, 3225, 3545 |
| MvnI | CGCG | 1 cut(s) | 2699 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1795, 2907 |
| NciI | CCSGG | 1 cut(s) | 3239 |
| NcoI | CCATGG | 1 cut(s) | 2541 |
| NdeI | CATATG | 4 cut(s) | 550, 3706, 3748, 3760 |
| NlaIV | GGNNCC | 5 cut(s) | 517, 785, 3148, 3248, 3265 |
| NmuCI | GTSAC | 6 cut(s) | 1468, 2228, 3157, 3409, 3572, 3641 |
| NruI | TCGCGA | 1 cut(s) | 2699 |
| NsiI | ATGCAT | 3 cut(s) | 903, 1282, 1800 |
| NspI | RCATGY | 1 cut(s) | 1415 |
| PaeI | GCATGC | 1 cut(s) | 1415 |
| PaeR7I | CTCGAG | 1 cut(s) | 2903 |
| PagI | TCATGA | 1 cut(s) | 3343 |
| PciSI | GCTCTTC | 1 cut(s) | 699 |
| PctI | GAATGC | 5 cut(s) | 901, 903, 1255, 3001, 3144 |
| PdmI | GAANNNNTTC | 7 cut(s) | 401, 901, 1113, 1647, 1929, 2430, 2707 |
| PfeI | GAWTC | 9 cut(s) | 441, 557, 1841, 1938, 2215, 2564, 2603, 2926, 3024 |
| PflFI | GACNNNGTC | 1 cut(s) | 3506 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2837 |
| PfoI | TCCNGGA | 3 cut(s) | 1291, 3223, 3237 |
| PkrI | GCNGC | 4 cut(s) | 253, 751, 1718, 3063 |
| PleI | GAGTC | 6 cut(s) | 132, 1751, 2335, 2836, 3118, 3310 |
| PpsI | GAGTC | 6 cut(s) | 132, 1751, 2335, 2836, 3118, 3310 |
| Ppu21I | YACGTR | 4 cut(s) | 1835, 2032, 3717, 3729 |
| PpuMI | RGGWCCY | 1 cut(s) | 784 |
| PshBI | ATTAAT | 1 cut(s) | 3384 |
| Psp124BI | GAGCTC | 1 cut(s) | 1401 |
| Psp5II | RGGWCCY | 1 cut(s) | 784 |
| Psp6I | CCWGG | 7 cut(s) | 1291, 1855, 2463, 2559, 3097, 3223, 3543 |
| PspFI | CCCAGC | 1 cut(s) | 780 |
| PspGI | CCWGG | 7 cut(s) | 1291, 1855, 2463, 2559, 3097, 3223, 3543 |
| PspN4I | GGNNCC | 5 cut(s) | 517, 785, 3148, 3248, 3265 |
| PspPI | GGNCC | 5 cut(s) | 135, 516, 784, 1289, 2908 |
| PspPPI | RGGWCCY | 1 cut(s) | 784 |
| PspXI | VCTCGAGB | 1 cut(s) | 2903 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 350, 382, 1143, 1175 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2232, 3206 |
| PsuI | RGATCY | 4 cut(s) | 2389, 2692, 2728, 3203 |
| PsyI | GACNNNGTC | 1 cut(s) | 3506 |
| RruI | TCGCGA | 1 cut(s) | 2699 |
| RseI | CAYNNNNRTG | 3 cut(s) | 906, 1965, 2235 |
| SacI | GAGCTC | 1 cut(s) | 1401 |
| SapI | GCTCTTC | 1 cut(s) | 699 |
| SatI | GCNGC | 4 cut(s) | 252, 750, 1717, 3062 |
| Sau96I | GGNCC | 5 cut(s) | 135, 516, 784, 1289, 2908 |
| SchI | GAGTC | 6 cut(s) | 133, 1752, 2336, 2836, 3119, 3310 |
| ScrFI | CCNGG | 8 cut(s) | 1293, 1857, 2465, 2561, 3099, 3225, 3239, 3545 |
| SduI | GDGCHC | 2 cut(s) | 1401, 1555 |
| SfaNI | GCATC | 9 cut(s) | 950, 1342, 1785, 1879, 2769, 2812, 3018, 3048, 3333 |
| SfcI | CTRYAG | 1 cut(s) | 2156 |
| Sfr274I | CTCGAG | 1 cut(s) | 2903 |
| SinI | GGWCC | 4 cut(s) | 135, 516, 784, 1289 |
| SlaI | CTCGAG | 1 cut(s) | 2903 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 906, 1965, 2235 |
| SmlI | CTYRAG | 8 cut(s) | 370, 541, 1129, 1394, 1456, 2384, 2903, 2921 |
| SmoI | CTYRAG | 8 cut(s) | 370, 541, 1129, 1394, 1456, 2384, 2903, 2921 |
| SnaBI | TACGTA | 3 cut(s) | 2032, 3717, 3729 |
| SphI | GCATGC | 1 cut(s) | 1415 |
| SsiI | CCGC | 6 cut(s) | 88, 151, 190, 798, 1716, 1725 |
| SspI | AATATT | 4 cut(s) | 633, 1445, 1647, 1704 |
| SspMI | CTAG | 8 cut(s) | 294, 849, 1493, 1934, 2141, 2279, 2870, 3143 |
| SstI | GAGCTC | 1 cut(s) | 1401 |
| StyD4I | CCNGG | 8 cut(s) | 1291, 1855, 2463, 2559, 3097, 3223, 3237, 3543 |
| StyI | CCWWGG | 3 cut(s) | 2396, 2541, 3162 |
| TaqI | TCGA | 8 cut(s) | 158, 611, 1234, 1810, 2904, 3012, 3565, 3672 |
| TatI | WGTACW | 5 cut(s) | 7, 63, 599, 1900, 1979 |
| TauI | GCSGC | 1 cut(s) | 1719 |
| TfiI | GAWTC | 9 cut(s) | 441, 557, 1841, 1938, 2215, 2564, 2603, 2926, 3024 |
| TscAI | CASTG | 7 cut(s) | 209, 1560, 2047, 2237, 2306, 2499, 3138 |
| TseFI | GTSAC | 6 cut(s) | 1468, 2228, 3157, 3409, 3572, 3641 |
| TseI | GCWGC | 3 cut(s) | 251, 749, 3061 |
| Tsp45I | GTSAC | 6 cut(s) | 1468, 2228, 3157, 3409, 3572, 3641 |
| TspGWI | ACGGA | 3 cut(s) | 409, 639, 3701 |
| TspRI | CASTG | 7 cut(s) | 209, 1560, 2047, 2237, 2306, 2499, 3138 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3506 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2837 |
| Vha464I | CTTAAG | 1 cut(s) | 2384 |
| VneI | GTGCAC | 1 cut(s) | 1551 |
| VpaK11BI | GGWCC | 4 cut(s) | 135, 516, 784, 1289 |
| VspI | ATTAAT | 1 cut(s) | 3384 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3509 |
| XbaI | TCTAGA | 1 cut(s) | 2278 |
| XceI | RCATGY | 1 cut(s) | 1415 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 568, 1283, 2548 |
| XhoI | CTCGAG | 1 cut(s) | 2903 |
| XmiI | GTMKAC | 2 cut(s) | 885, 1300 |
| XmnI | GAANNNNTTC | 7 cut(s) | 401, 901, 1113, 1647, 1929, 2430, 2707 |
| XspI | CTAG | 8 cut(s) | 294, 849, 1493, 1934, 2141, 2279, 2870, 3143 |
| ZraI | GACGTC | 1 cut(s) | 162 |
| Zsp2I | ATGCAT | 3 cut(s) | 903, 1282, 1800 |