TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 106 - 276 | 2.6e-53 | TIR domain |
| TIR_2 | PF13676 | 108 - 205 | 3.2e-17 | TIR domain |
| NB-ARC | PF00931 | 303 - 455 | 3.1e-20 | NB-ARC domain |
| NACHT | PF05729 | 307 - 447 | 3.5e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 525 - 591 | 1.7e-17 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 981 |
| AccB1I | GGYRCC | 1 cut(s) | 1695 |
| AccI | GTMKAC | 1 cut(s) | 1176 |
| AciI | CCGC | 4 cut(s) | 279, 463, 1119, 1427 |
| AclI | AACGTT | 1 cut(s) | 569 |
| AclWI | GGATC | 4 cut(s) | 491, 602, 753, 1456 |
| AcoI | YGGCCR | 1 cut(s) | 1301 |
| AcsI | RAATTY | 5 cut(s) | 730, 930, 986, 1277, 1524 |
| AcuI | CTGAAG | 4 cut(s) | 319, 741, 1339, 1842 |
| AfaI | GTAC | 3 cut(s) | 512, 1155, 1918 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1128 |
| AflIII | ACRYGT | 3 cut(s) | 147, 350, 1264 |
| AgeI | ACCGGT | 1 cut(s) | 1692 |
| AgsI | TTSAA | 7 cut(s) | 835, 1004, 1022, 1439, 1462, 1504, 1871 |
| AjnI | CCWGG | 2 cut(s) | 471, 1792 |
| Alw21I | GWGCWC | 2 cut(s) | 1338, 1392 |
| Alw26I | GTCTC | 2 cut(s) | 536, 1936 |
| AlwI | GGATC | 4 cut(s) | 491, 602, 753, 1456 |
| Ama87I | CYCGRG | 2 cut(s) | 533, 1228 |
| AoxI | GGCC | 4 cut(s) | 124, 367, 1225, 1301 |
| ApeKI | GCWGC | 1 cut(s) | 1109 |
| ApoI | RAATTY | 5 cut(s) | 730, 930, 986, 1277, 1524 |
| AseI | ATTAAT | 1 cut(s) | 1710 |
| AsiGI | ACCGGT | 1 cut(s) | 1692 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1137 |
| AspLEI | GCGC | 1 cut(s) | 844 |
| AspS9I | GGNCC | 5 cut(s) | 367, 1116, 1226, 1315, 1681 |
| AsuC2I | CCSGG | 2 cut(s) | 1229, 1230 |
| AsuHPI | GGTGA | 1 cut(s) | 128 |
| AsuII | TTCGAA | 1 cut(s) | 728 |
| AvaI | CYCGRG | 2 cut(s) | 533, 1228 |
| AvaII | GGWCC | 3 cut(s) | 1116, 1315, 1681 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 855, 888, 1978, 2011 |
| BanI | GGYRCC | 1 cut(s) | 1695 |
| BanII | GRGCYC | 1 cut(s) | 1338 |
| BauI | CACGAG | 1 cut(s) | 1515 |
| BbsI | GAAGAC | 2 cut(s) | 351, 490 |
| Bbv12I | GWGCWC | 2 cut(s) | 1338, 1392 |
| BbvI | GCAGC | 1 cut(s) | 1096 |
| BccI | CCATC | 2 cut(s) | 1640, 2007 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1747, 1781 |
| BciT130I | CCWGG | 2 cut(s) | 473, 1794 |
| BciVI | GTATCC | 1 cut(s) | 1979 |
| BcnI | CCSGG | 2 cut(s) | 1229, 1230 |
| BcoDI | GTCTC | 2 cut(s) | 536, 1936 |
| BfaI | CTAG | 5 cut(s) | 480, 542, 1043, 1254, 1374 |
| BfmI | CTRYAG | 1 cut(s) | 1110 |
| BfoI | RGCGCY | 1 cut(s) | 845 |
| BfuI | GTATCC | 1 cut(s) | 1979 |
| BisI | GCNGC | 2 cut(s) | 1110, 1427 |
| BlsI | GCNGC | 2 cut(s) | 1111, 1428 |
| BmcAI | AGTACT | 1 cut(s) | 1918 |
| Bme1390I | CCNGG | 4 cut(s) | 473, 1229, 1230, 1794 |
| Bme18I | GGWCC | 3 cut(s) | 1116, 1315, 1681 |
| BmeT110I | CYCGRG | 2 cut(s) | 533, 1228 |
| BmgT120I | GGNCC | 5 cut(s) | 367, 1116, 1226, 1315, 1681 |
| BmiI | GGNNCC | 2 cut(s) | 1117, 1697 |
| BmrFI | CCNGG | 4 cut(s) | 473, 1229, 1230, 1794 |
| BmsI | GCATC | 3 cut(s) | 906, 1722, 1825 |
| BoxI | GACNNNNGTC | 1 cut(s) | 392 |
| BpiI | GAAGAC | 2 cut(s) | 351, 490 |
| BpmI | CTGGAG | 1 cut(s) | 505 |
| Bpu10I | CCTNAGC | 1 cut(s) | 19 |
| Bpu14I | TTCGAA | 1 cut(s) | 728 |
| BpuEI | CTTGAG | 3 cut(s) | 487, 852, 1352 |
| BpuMI | CCSGG | 2 cut(s) | 1229, 1230 |
| BsaAI | YACGTR | 1 cut(s) | 353 |
| BsaBI | GATNNNNATC | 1 cut(s) | 488 |
| BsaJI | CCNNGG | 5 cut(s) | 121, 472, 1122, 1228, 1229 |
| BsaWI | WCCGGW | 2 cut(s) | 80, 1692 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 503, 533 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1128 |
| Bse118I | RCCGGY | 1 cut(s) | 1692 |
| Bse1I | ACTGG | 1 cut(s) | 637 |
| Bse8I | GATNNNNATC | 1 cut(s) | 488 |
| BseBI | CCWGG | 2 cut(s) | 473, 1794 |
| BseDI | CCNNGG | 5 cut(s) | 121, 472, 1122, 1228, 1229 |
| BseGI | GGATG | 8 cut(s) | 170, 194, 227, 260, 795, 1501, 1651, 1816 |
| BseJI | GATNNNNATC | 1 cut(s) | 488 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1128 |
| BseMII | CTCAG | 3 cut(s) | 763, 1911, 1937 |
| BseNI | ACTGG | 1 cut(s) | 637 |
| BseX3I | CGGCCG | 1 cut(s) | 1301 |
| BseXI | GCAGC | 1 cut(s) | 1096 |
| BseYI | CCCAGC | 2 cut(s) | 741, 1979 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1304 |
| BshFI | GGCC | 4 cut(s) | 126, 369, 1227, 1303 |
| BshNI | GGYRCC | 1 cut(s) | 1695 |
| BshTI | ACCGGT | 1 cut(s) | 1692 |
| BsiEI | CGRYCG | 1 cut(s) | 1304 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1338, 1392 |
| BsiHKCI | CYCGRG | 2 cut(s) | 533, 1228 |
| BsiSI | CCGG | 3 cut(s) | 81, 1229, 1693 |
| BslFI | GGGAC | 2 cut(s) | 140, 1129 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1128 |
| BsmAI | GTCTC | 2 cut(s) | 536, 1936 |
| BsmFI | GGGAC | 2 cut(s) | 140, 1129 |
| BsnI | GGCC | 4 cut(s) | 126, 369, 1227, 1303 |
| BsoBI | CYCGRG | 2 cut(s) | 533, 1228 |
| Bsp119I | TTCGAA | 1 cut(s) | 728 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1338, 1392 |
| Bsp143I | GATC | 5 cut(s) | 483, 549, 607, 745, 1448 |
| BspACI | CCGC | 4 cut(s) | 279, 463, 1119, 1427 |
| BspANI | GGCC | 4 cut(s) | 126, 369, 1227, 1303 |
| BspCNI | CTCAG | 3 cut(s) | 762, 1912, 1938 |
| BspLI | GGNNCC | 2 cut(s) | 1117, 1697 |
| BspMAI | CTGCAG | 1 cut(s) | 1114 |
| BspPI | GGATC | 4 cut(s) | 491, 602, 753, 1456 |
| BspT104I | TTCGAA | 1 cut(s) | 728 |
| BspT107I | GGYRCC | 1 cut(s) | 1695 |
| BsrFI | RCCGGY | 1 cut(s) | 1692 |
| BsrI | ACTGG | 1 cut(s) | 637 |
| BssAI | RCCGGY | 1 cut(s) | 1692 |
| BssECI | CCNNGG | 5 cut(s) | 121, 472, 1122, 1228, 1229 |
| BssMI | GATC | 5 cut(s) | 483, 549, 607, 745, 1448 |
| BssSI | CACGAG | 1 cut(s) | 1515 |
| BssT1I | CCWWGG | 1 cut(s) | 1122 |
| Bst2BI | CACGAG | 1 cut(s) | 1515 |
| Bst2UI | CCWGG | 2 cut(s) | 473, 1794 |
| Bst4CI | ACNGT | 3 cut(s) | 510, 712, 1415 |
| Bst6I | CTCTTC | 2 cut(s) | 427, 1934 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1741 |
| BstBAI | YACGTR | 1 cut(s) | 353 |
| BstBI | TTCGAA | 1 cut(s) | 728 |
| BstC8I | GCNNGC | 7 cut(s) | 311, 465, 1350, 1392, 1431, 1773, 1878 |
| BstDEI | CTNAG | 7 cut(s) | 19, 428, 749, 1340, 1920, 1946, 2009 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1126 |
| BstF5I | GGATG | 8 cut(s) | 170, 194, 227, 260, 795, 1501, 1651, 1816 |
| BstH2I | RGCGCY | 1 cut(s) | 845 |
| BstHHI | GCGC | 1 cut(s) | 844 |
| BstKTI | GATC | 5 cut(s) | 486, 552, 610, 748, 1451 |
| BstMAI | GTCTC | 2 cut(s) | 536, 1936 |
| BstMBI | GATC | 5 cut(s) | 483, 549, 607, 745, 1448 |
| BstMCI | CGRYCG | 1 cut(s) | 1304 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 49, 123, 221, 339, 1118, 1233, 1741 |
| BstNI | CCWGG | 2 cut(s) | 473, 1794 |
| BstNSI | RCATGY | 5 cut(s) | 151, 620, 665, 1352, 1775 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 392 |
| BstSCI | CCNGG | 4 cut(s) | 471, 1227, 1228, 1792 |
| BstSFI | CTRYAG | 1 cut(s) | 1110 |
| BstV1I | GCAGC | 1 cut(s) | 1096 |
| BstV2I | GAAGAC | 2 cut(s) | 351, 490 |
| BstX2I | RGATCY | 2 cut(s) | 483, 745 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1223 |
| BstYI | RGATCY | 2 cut(s) | 483, 745 |
| BstZI | CGGCCG | 1 cut(s) | 1301 |
| BsuI | GTATCC | 1 cut(s) | 1979 |
| BsuRI | GGCC | 4 cut(s) | 126, 369, 1227, 1303 |
| BtgZI | GCGATG | 1 cut(s) | 56 |
| BtsCI | GGATG | 8 cut(s) | 170, 194, 227, 260, 795, 1501, 1651, 1816 |
| BtsI | GCAGTG | 1 cut(s) | 1108 |
| BtsIMutI | CAGTG | 1 cut(s) | 1108 |
| Cac8I | GCNNGC | 7 cut(s) | 311, 465, 1350, 1392, 1431, 1773, 1878 |
| CfoI | GCGC | 1 cut(s) | 844 |
| Cfr10I | RCCGGY | 1 cut(s) | 1692 |
| Cfr13I | GGNCC | 5 cut(s) | 367, 1116, 1226, 1315, 1681 |
| Cfr9I | CCCGGG | 1 cut(s) | 1228 |
| CseI | GACGC | 1 cut(s) | 1152 |
| Csp6I | GTAC | 3 cut(s) | 511, 1154, 1917 |
| CspAI | ACCGGT | 1 cut(s) | 1692 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1396, 1431 |
| CviQI | GTAC | 3 cut(s) | 511, 1154, 1917 |
| DdeI | CTNAG | 7 cut(s) | 19, 428, 749, 1340, 1920, 1946, 2009 |
| DpnI | GATC | 5 cut(s) | 485, 551, 609, 747, 1450 |
| DpnII | GATC | 5 cut(s) | 483, 549, 607, 745, 1448 |
| EaeI | YGGCCR | 1 cut(s) | 1301 |
| EagI | CGGCCG | 1 cut(s) | 1301 |
| Eam1104I | CTCTTC | 2 cut(s) | 427, 1934 |
| EarI | CTCTTC | 2 cut(s) | 427, 1934 |
| EciI | GGCGGA | 1 cut(s) | 268 |
| Ecl136II | GAGCTC | 1 cut(s) | 1336 |
| EclXI | CGGCCG | 1 cut(s) | 1301 |
| Eco130I | CCWWGG | 1 cut(s) | 1122 |
| Eco24I | GRGCYC | 1 cut(s) | 1338 |
| Eco32I | GATATC | 2 cut(s) | 1075, 1765 |
| Eco47I | GGWCC | 3 cut(s) | 1116, 1315, 1681 |
| Eco52I | CGGCCG | 1 cut(s) | 1301 |
| Eco53kI | GAGCTC | 1 cut(s) | 1336 |
| Eco57I | CTGAAG | 4 cut(s) | 319, 741, 1339, 1842 |
| Eco88I | CYCGRG | 2 cut(s) | 533, 1228 |
| EcoICRI | GAGCTC | 1 cut(s) | 1336 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1126 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1681 |
| EcoRII | CCWGG | 2 cut(s) | 471, 1792 |
| EcoRV | GATATC | 2 cut(s) | 1075, 1765 |
| EcoT14I | CCWWGG | 1 cut(s) | 1122 |
| EcoT22I | ATGCAT | 1 cut(s) | 1737 |
| EcoT38I | GRGCYC | 1 cut(s) | 1338 |
| ErhI | CCWWGG | 1 cut(s) | 1122 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1314, 1346 |
| FaqI | GGGAC | 2 cut(s) | 140, 1129 |
| FauI | CCCGC | 1 cut(s) | 456 |
| FblI | GTMKAC | 1 cut(s) | 1176 |
| Fnu4HI | GCNGC | 2 cut(s) | 1110, 1427 |
| FokI | GGATG | 8 cut(s) | 157, 181, 214, 247, 802, 1508, 1658, 1803 |
| FriOI | GRGCYC | 1 cut(s) | 1338 |
| Fsp4HI | GCNGC | 2 cut(s) | 1110, 1427 |
| FspBI | CTAG | 5 cut(s) | 480, 542, 1043, 1254, 1374 |
| GlaI | GCGC | 1 cut(s) | 843 |
| GluI | GCNGC | 2 cut(s) | 1110, 1427 |
| GsaI | CCCAGC | 2 cut(s) | 745, 1983 |
| GsuI | CTGGAG | 1 cut(s) | 505 |
| HaeII | RGCGCY | 1 cut(s) | 845 |
| HaeIII | GGCC | 4 cut(s) | 126, 369, 1227, 1303 |
| HapII | CCGG | 3 cut(s) | 81, 1229, 1693 |
| HgaI | GACGC | 1 cut(s) | 1152 |
| HhaI | GCGC | 1 cut(s) | 844 |
| Hin6I | GCGC | 1 cut(s) | 842 |
| HinP1I | GCGC | 1 cut(s) | 842 |
| HindIII | AAGCTT | 2 cut(s) | 331, 723 |
| HinfI | GANTC | 7 cut(s) | 399, 518, 905, 1239, 1453, 1510, 1674 |
| HpaII | CCGG | 3 cut(s) | 81, 1229, 1693 |
| HphI | GGTGA | 1 cut(s) | 128 |
| Hpy166II | GTNNAC | 1 cut(s) | 1177 |
| Hpy188I | TCNGA | 9 cut(s) | 338, 398, 657, 752, 857, 902, 910, 1358, 1613 |
| Hpy188III | TCNNGA | 9 cut(s) | 504, 533, 622, 787, 1331, 1436, 1748, 1820, 1854 |
| Hpy8I | GTNNAC | 1 cut(s) | 1177 |
| Hpy99I | CGWCG | 3 cut(s) | 422, 1146, 1556 |
| HpyAV | CCTTC | 5 cut(s) | 621, 670, 998, 1363, 1865 |
| HpyCH4III | ACNGT | 3 cut(s) | 510, 712, 1415 |
| HpyCH4IV | ACGT | 6 cut(s) | 352, 569, 603, 837, 1264, 1968 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 49, 123, 221, 339, 1118, 1233, 1741 |
| HpyF3I | CTNAG | 7 cut(s) | 19, 428, 749, 1340, 1920, 1946, 2009 |
| HpySE526I | ACGT | 6 cut(s) | 352, 569, 603, 837, 1264, 1968 |
| HspAI | GCGC | 1 cut(s) | 842 |
| Kzo9I | GATC | 5 cut(s) | 483, 549, 607, 745, 1448 |
| LmnI | GCTCC | 5 cut(s) | 122, 538, 1233, 1341, 1959 |
| Lsp1109I | GCAGC | 1 cut(s) | 1096 |
| LweI | GCATC | 3 cut(s) | 906, 1722, 1825 |
| MaeI | CTAG | 5 cut(s) | 480, 542, 1043, 1254, 1374 |
| MaeII | ACGT | 6 cut(s) | 352, 569, 603, 837, 1264, 1968 |
| MaeIII | GTNAC | 4 cut(s) | 805, 1191, 1652, 1702 |
| MalI | GATC | 5 cut(s) | 485, 551, 609, 747, 1450 |
| MboI | GATC | 5 cut(s) | 483, 549, 607, 745, 1448 |
| MfeI | CAATTG | 1 cut(s) | 963 |
| MflI | RGATCY | 2 cut(s) | 483, 745 |
| MhlI | GDGCHC | 2 cut(s) | 1338, 1392 |
| MlyI | GAGTC | 2 cut(s) | 512, 1447 |
| MmeI | TCCRAC | 3 cut(s) | 376, 835, 1981 |
| Mph1103I | ATGCAT | 1 cut(s) | 1737 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1137 |
| MseI | TTAA | 6 cut(s) | 32, 93, 546, 1148, 1710, 1899 |
| MslI | CAYNNNNRTG | 1 cut(s) | 666 |
| MspA1I | CMGCKG | 2 cut(s) | 525, 1429 |
| MspI | CCGG | 3 cut(s) | 81, 1229, 1693 |
| MspR9I | CCNGG | 4 cut(s) | 473, 1229, 1230, 1794 |
| MunI | CAATTG | 1 cut(s) | 963 |
| MvaI | CCWGG | 2 cut(s) | 473, 1794 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 49, 123, 221, 339, 1118, 1233, 1741 |
| NciI | CCSGG | 2 cut(s) | 1229, 1230 |
| NdeII | GATC | 5 cut(s) | 483, 549, 607, 745, 1448 |
| NlaIV | GGNNCC | 2 cut(s) | 1117, 1697 |
| NmeAIII | GCCGAG | 1 cut(s) | 102 |
| NmuCI | GTSAC | 2 cut(s) | 805, 1652 |
| NsiI | ATGCAT | 1 cut(s) | 1737 |
| NspI | RCATGY | 5 cut(s) | 151, 620, 665, 1352, 1775 |
| NspV | TTCGAA | 1 cut(s) | 728 |
| PaeI | GCATGC | 2 cut(s) | 1352, 1775 |
| PaeR7I | CTCGAG | 1 cut(s) | 533 |
| PciI | ACATGT | 1 cut(s) | 147 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1137 |
| PfeI | GAWTC | 5 cut(s) | 399, 905, 1239, 1510, 1674 |
| PfoI | TCCNGGA | 1 cut(s) | 1792 |
| PinAI | ACCGGT | 1 cut(s) | 1692 |
| PkrI | GCNGC | 2 cut(s) | 1111, 1428 |
| PleI | GAGTC | 2 cut(s) | 512, 1447 |
| PpsI | GAGTC | 2 cut(s) | 512, 1447 |
| Ppu21I | YACGTR | 1 cut(s) | 353 |
| PpuMI | RGGWCCY | 1 cut(s) | 1681 |
| PscI | ACATGT | 1 cut(s) | 147 |
| PshAI | GACNNNNGTC | 1 cut(s) | 392 |
| PshBI | ATTAAT | 1 cut(s) | 1710 |
| PsiI | TTATAA | 1 cut(s) | 981 |
| Psp124BI | GAGCTC | 1 cut(s) | 1338 |
| Psp1406I | AACGTT | 1 cut(s) | 569 |
| Psp5II | RGGWCCY | 1 cut(s) | 1681 |
| Psp6I | CCWGG | 2 cut(s) | 471, 1792 |
| PspFI | CCCAGC | 2 cut(s) | 741, 1979 |
| PspGI | CCWGG | 2 cut(s) | 471, 1792 |
| PspN4I | GGNNCC | 2 cut(s) | 1117, 1697 |
| PspPI | GGNCC | 5 cut(s) | 367, 1116, 1226, 1315, 1681 |
| PspPPI | RGGWCCY | 1 cut(s) | 1681 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 700, 732, 812, 844 |
| PstI | CTGCAG | 1 cut(s) | 1114 |
| PsuI | RGATCY | 2 cut(s) | 483, 745 |
| PvuII | CAGCTG | 1 cut(s) | 525 |
| RsaI | GTAC | 3 cut(s) | 512, 1155, 1918 |
| RsaNI | GTAC | 3 cut(s) | 511, 1154, 1917 |
| RseI | CAYNNNNRTG | 1 cut(s) | 666 |
| SacI | GAGCTC | 1 cut(s) | 1338 |
| SaqAI | TTAA | 6 cut(s) | 32, 93, 546, 1148, 1710, 1899 |
| SatI | GCNGC | 2 cut(s) | 1110, 1427 |
| Sau3AI | GATC | 5 cut(s) | 483, 549, 607, 745, 1448 |
| Sau96I | GGNCC | 5 cut(s) | 367, 1116, 1226, 1315, 1681 |
| ScaI | AGTACT | 1 cut(s) | 1918 |
| SchI | GAGTC | 2 cut(s) | 512, 1447 |
| ScrFI | CCNGG | 4 cut(s) | 473, 1229, 1230, 1794 |
| SduI | GDGCHC | 2 cut(s) | 1338, 1392 |
| SfaNI | GCATC | 3 cut(s) | 906, 1722, 1825 |
| SfcI | CTRYAG | 1 cut(s) | 1110 |
| Sfr274I | CTCGAG | 1 cut(s) | 533 |
| SfuI | TTCGAA | 1 cut(s) | 728 |
| SinI | GGWCC | 3 cut(s) | 1116, 1315, 1681 |
| SlaI | CTCGAG | 1 cut(s) | 533 |
| SmaI | CCCGGG | 1 cut(s) | 1230 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 666 |
| SmlI | CTYRAG | 4 cut(s) | 502, 533, 867, 1331 |
| SmoI | CTYRAG | 4 cut(s) | 502, 533, 867, 1331 |
| SphI | GCATGC | 2 cut(s) | 1352, 1775 |
| SsiI | CCGC | 4 cut(s) | 279, 463, 1119, 1427 |
| SspMI | CTAG | 5 cut(s) | 480, 542, 1043, 1254, 1374 |
| SstI | GAGCTC | 1 cut(s) | 1338 |
| StyD4I | CCNGG | 4 cut(s) | 471, 1227, 1228, 1792 |
| StyI | CCWWGG | 1 cut(s) | 1122 |
| TaaI | ACNGT | 3 cut(s) | 510, 712, 1415 |
| TaiI | ACGT | 6 cut(s) | 355, 572, 606, 840, 1267, 1971 |
| TaqI | TCGA | 8 cut(s) | 14, 534, 728, 1141, 1451, 1590, 1677, 1972 |
| TatI | WGTACW | 1 cut(s) | 1916 |
| TauI | GCSGC | 1 cut(s) | 1429 |
| TfiI | GAWTC | 5 cut(s) | 399, 905, 1239, 1510, 1674 |
| Tru1I | TTAA | 6 cut(s) | 32, 93, 546, 1148, 1710, 1899 |
| Tru9I | TTAA | 6 cut(s) | 32, 93, 546, 1148, 1710, 1899 |
| TscAI | CASTG | 1 cut(s) | 1108 |
| TseFI | GTSAC | 2 cut(s) | 805, 1652 |
| TseI | GCWGC | 1 cut(s) | 1109 |
| Tsp45I | GTSAC | 2 cut(s) | 805, 1652 |
| TspDTI | ATGAA | 8 cut(s) | 158, 316, 684, 786, 1008, 1491, 1512, 1952 |
| TspGWI | ACGGA | 2 cut(s) | 142, 1816 |
| TspMI | CCCGGG | 1 cut(s) | 1228 |
| TspRI | CASTG | 1 cut(s) | 1108 |
| VpaK11BI | GGWCC | 3 cut(s) | 1116, 1315, 1681 |
| VspI | ATTAAT | 1 cut(s) | 1710 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1126 |
| XapI | RAATTY | 5 cut(s) | 730, 930, 986, 1277, 1524 |
| XceI | RCATGY | 5 cut(s) | 151, 620, 665, 1352, 1775 |
| XhoI | CTCGAG | 1 cut(s) | 533 |
| XmaI | CCCGGG | 1 cut(s) | 1228 |
| XmiI | GTMKAC | 1 cut(s) | 1176 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1137 |
| XspI | CTAG | 5 cut(s) | 480, 542, 1043, 1254, 1374 |
| ZrmI | AGTACT | 1 cut(s) | 1918 |
| Zsp2I | ATGCAT | 1 cut(s) | 1737 |