pycom15g09440

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
6168042 .. 6170646
2605 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g09440.4

Sequence Viewer

Length: 2190 bp
ATGGTTGGAACGGGGAAGACAACGGTTGCAAAAGCCATTTTCAACAGAGTTCATCAAAGCTTTGAAGGTAAAAGTTTCCTTTCAAAAGTGAGGGAAGAGAGTGTGGTTAAACTGCAAAACCAACTTCTTTGTGATATCTTGAAACCGGCCAACATAGAGGTAAGTAGTGTGGATCAAGGAACCAAGGAGATACAAAAAAGACTTGGCGGCATAAAGGTACTTGTCATAATTGATGACATAGACTCTGTGGATCAGCTAGAAGAGTTAGCTATAAAACACGAGTCGTTTGGTCGAGGGAGTAGAATTATTGTAACAACAAGAGATGAACAATTGCTAAAGTTCATTAGAGTTGATAAGACGTGTTTGGCACAAACAATGAATAATGAAGAAGCTCTTCAGCTTCTTAGTTGGCGTGCCTTCAGGAAGAGTCATCCTAACGATGATGAATATCTCAAACTCGCAAATAAGGTTGTTGATTACTGTGGAGGGTTGCCACTAGCGCTTGAAGTTTTAGGTTCTTATCTAAGTTCAAAAACCAAAAGAGAATGGAGAAGTGCACTGCGCAAATTGAAAAGAAAGCCTCACGGGAAGATTTATGAAAAGCTTAAAATGAGCTACGATGGGCTAATTGACGATGACGTGAAGGCTATATTCCTTGACATATCTTGTTTCTTTATTGGAATGAACAAGGACTATGTCATGACAATATTAGATGGCTGTGATTTTGACCCAGATATAGGAATTGGAGAACTCCATGATCGGTGCCTTGTAACTGTTGATGAAGGAAACAACCTTATAATGCATGATTTGCTTCGAGATATGGGCAGAGAAATTGTACGTGCAAAATCTCCTACCATCACTGGAAAACGTTGTAGATTGTGGGACCAGGACGATGTAAAAGACGTATTGAGTAACATATCTGGAACGGAGGACGTTGAAGGACTCACTTTAGATTTGCATGAGTCTGACAAGCCTAGCTTCAGTACAGAAGCACTTGGAGAGATGCGGAGGCTGAGGTTGCTCGTGCTGAAAGGTGTGAAGTTCACAGGAAACTGCACATACCTTTCCAAAAAGCTAACATGGCTGTGTTGGCCTGAGTTTCCTCTAGAGGTCATGCCAGAAGATTTTAATCTACCAAACCTAGTTGATGTCGATCTGAGTCATAGCCAAATGGTAGTTTGGACGGACTCTGACGTGAGGCTTGAGAAATTGAAGTTTCTTAATCTGGGTCATTGCTGTCGCCTAAAAAGATCACCAGACTTTTCAAAACTCCCCAATCTCGAGAGATTGATACTCAAAGACTGCAAGAGTTTGTCCGAGGTTCACCCTTCCATAGTACAACTGAAGTGCCTTAAATATTTCTCTCTTGCGAACTCCAATTTAACAAATGATGCAATTCCTGAGGATCTCGGGTCTATATCTTCTTTAGAAGTTTTAGATCTAAGAGGCAATGATTTTACAGCACTACCTATCGTCACTGGCCTTTCCAAGCTCCAAACTTTACAGTTGGATAATTGCACAAAGCTTCAGGTAATTCCAAATTTACCGACAAGGTTGGAAATCCTGGAAGCGAATCAGTGCGTTGCATTGGAAAGAATGCCAGATTTTTCAGAGATGTCGAGATTGAGAGAATTGCATCTGAATTACTCCCCCAAACTCACTGAAATTCCAGGCCTGGATAAGTCGTTAACCTCCATGACAAGGATTCATATGGAAGGGTGCACCAATCTCAATGATGCTTTTCTGGAAGCAATCCAACGGGGATGGAGTGCGAGCGGAAATGGTGGCCTTTTTCTTCCTGGACCTTCATGGTTAAGGGGTGTCCAGCATAAGGAGAAAATCAATGAATATACGCTTTACTGTGAGTCCAGGTCATATTCAAGTGAATACAAGGAAGGCAGAGATCGATCTAATGAGGCAGCAAGACCTGGTGATGACTCATACGATGAGAATCGATCTCACAAAAGAATAAGGTTTGATCTCAGTATAGAAAGCAATGCAGAGGGAACTGTTGCCGGGGAATATAATTGCATTGTAGTTCAAAACCACAAAAGCTGCATGGAATCTGATGCGACCTTTGAGGAGGGGGGAGATGGTGAGGATGAAGAGAAGGCTCCAAGTGCTGTACTGGTATCCGTTAATTGTTCTTCAAGCGTAACTGATCAGAAATACAAATTCGGAATCAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

730

Amino Acids

82.22

Weight (kDa)

5.53

Isoelectric Point (pI)

40.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 797
Acc16I TGCGCA 1 cut(s) 563
AccB1I GGYRCC 1 cut(s) 762
AccBSI CCGCTC 1 cut(s) 1776
AciI CCGC 3 cut(s) 207, 1006, 1776
AclI AACGTT 1 cut(s) 868
AclWI GGATC 3 cut(s) 180, 258, 1413
AcoI YGGCCR 1 cut(s) 147
AcsI RAATTY 3 cut(s) 1540, 1665, 2174
AcuI CTGAAG 5 cut(s) 380, 403, 964, 1364, 1511
AfaI GTAC 5 cut(s) 219, 837, 985, 1338, 2127
AfeI AGCGCT 1 cut(s) 501
AfiI CCNNNNNNNGG 3 cut(s) 737, 1701, 1831
AflIII ACRYGT 1 cut(s) 359
AjiI CACGTC 3 cut(s) 360, 640, 1195
AjnI CCWGG 7 cut(s) 885, 1563, 1669, 1674, 1798, 1868, 1927
Alw21I GWGCWC 2 cut(s) 559, 1724
Alw44I GTGCAC 2 cut(s) 555, 1720
AlwI GGATC 3 cut(s) 180, 258, 1413
Ama87I CYCGRG 2 cut(s) 1280, 1409
Aor51HI AGCGCT 1 cut(s) 501
AoxI GGCC 5 cut(s) 147, 1091, 1480, 1672, 1786
ApaLI GTGCAC 2 cut(s) 555, 1720
ApeKI GCWGC 2 cut(s) 1919, 2055
ApoI RAATTY 3 cut(s) 1540, 1665, 2174
Asp700I GAANNNNTTC 1 cut(s) 393
AspLEI GCGC 2 cut(s) 502, 564
AspS9I GGNCC 2 cut(s) 883, 1802
AsuC2I CCSGG 1 cut(s) 2017
AsuHPI GGTGA 4 cut(s) 1245, 1316, 1943, 2108
AvaI CYCGRG 2 cut(s) 1280, 1409
AvaII GGWCC 2 cut(s) 883, 1802
AxyI CCTNAGG 1 cut(s) 1401
BaeGI GKGCMC 2 cut(s) 559, 1724
BanI GGYRCC 1 cut(s) 762
BauI CACGAG 2 cut(s) 278, 1022
BbsI GAAGAC 1 cut(s) 23
Bbv12I GWGCWC 2 cut(s) 559, 1724
BbvCI CCTCAGC 1 cut(s) 1013
BbvI GCAGC 2 cut(s) 1931, 2042
BccI CCATC 5 cut(s) 614, 707, 863, 1758, 2087
BciT130I CCWGG 7 cut(s) 887, 1565, 1671, 1676, 1800, 1870, 1929
BciVI GTATCC 1 cut(s) 2143
BclI TGATCA 1 cut(s) 2161
BcnI CCSGG 1 cut(s) 2017
BfaI CTAG 5 cut(s) 257, 497, 975, 1106, 1142
BfoI RGCGCY 1 cut(s) 503
BfuI GTATCC 1 cut(s) 2143
BglII AGATCT 1 cut(s) 1438
BisI GCNGC 3 cut(s) 208, 1920, 2056
BlsI GCNGC 3 cut(s) 209, 1921, 2057
Bme1390I CCNGG 8 cut(s) 887, 1565, 1671, 1676, 1800, 1870, 1929, 2017
Bme18I GGWCC 2 cut(s) 883, 1802
BmeT110I CYCGRG 2 cut(s) 1280, 1409
BmgBI CACGTC 3 cut(s) 360, 640, 1195
BmgT120I GGNCC 2 cut(s) 883, 1802
BmiI GGNNCC 4 cut(s) 181, 764, 884, 2115
BmrFI CCNGG 8 cut(s) 887, 1565, 1671, 1676, 1800, 1870, 1929, 2017
BmsI GCATC 5 cut(s) 993, 1381, 1645, 1726, 2059
BpiI GAAGAC 1 cut(s) 23
Bpu10I CCTNAGC 1 cut(s) 1013
BpuEI CTTGAG 1 cut(s) 1223
BpuMI CCSGG 1 cut(s) 2017
Bsa29I ATCGAT 2 cut(s) 1906, 1954
BsaAI YACGTR 1 cut(s) 839
BsaBI GATNNNNATC 4 cut(s) 447, 1128, 1152, 1950
BsaJI CCNNGG 3 cut(s) 183, 1317, 2016
Bsc4I CCNNNNNNNGG 3 cut(s) 737, 1701, 1831
Bse118I RCCGGY 1 cut(s) 145
Bse1I ACTGG 3 cut(s) 865, 1483, 2133
Bse21I CCTNAGG 1 cut(s) 1401
Bse3DI GCAATG 3 cut(s) 1231, 1456, 2002
Bse8I GATNNNNATC 4 cut(s) 447, 1128, 1152, 1950
BseBI CCWGG 7 cut(s) 887, 1565, 1671, 1676, 1800, 1870, 1929
BseCI ATCGAT 2 cut(s) 1906, 1954
BseDI CCNNGG 3 cut(s) 183, 1317, 2016
BseGI GGATG 3 cut(s) 430, 1769, 2107
BseJI GATNNNNATC 4 cut(s) 447, 1128, 1152, 1950
BseLI CCNNNNNNNGG 3 cut(s) 737, 1701, 1831
BseMI GCAATG 3 cut(s) 1231, 1456, 2002
BseMII CTCAG 5 cut(s) 1004, 1086, 1148, 1392, 1996
BseNI ACTGG 3 cut(s) 865, 1483, 2133
BseRI GAGGAG 1 cut(s) 2096
BseSI GKGCMC 2 cut(s) 559, 1724
BseXI GCAGC 2 cut(s) 1931, 2042
BsgI GTGCAG 1 cut(s) 1039
BshFI GGCC 5 cut(s) 149, 1093, 1482, 1674, 1788
BshNI GGYRCC 1 cut(s) 762
BshVI ATCGAT 2 cut(s) 1906, 1954
BsiHKAI GWGCWC 2 cut(s) 559, 1724
BsiHKCI CYCGRG 2 cut(s) 1280, 1409
BsiSI CCGG 2 cut(s) 146, 2016
BslFI GGGAC 1 cut(s) 896
BslI CCNNNNNNNGG 3 cut(s) 737, 1701, 1831
BsmFI GGGAC 1 cut(s) 896
BsmI GAATGC 1 cut(s) 1602
BsnI GGCC 5 cut(s) 149, 1093, 1482, 1674, 1788
BsoBI CYCGRG 2 cut(s) 1280, 1409
Bsp1286I GDGCHC 2 cut(s) 559, 1724
BspACI CCGC 3 cut(s) 207, 1006, 1776
BspANI GGCC 5 cut(s) 149, 1093, 1482, 1674, 1788
BspCNI CTCAG 5 cut(s) 1005, 1087, 1149, 1393, 1995
BspDI ATCGAT 2 cut(s) 1906, 1954
BspHI TCATGA 1 cut(s) 699
BspLI GGNNCC 4 cut(s) 181, 764, 884, 2115
BspPI GGATC 3 cut(s) 180, 258, 1413
BspQI GCTCTTC 1 cut(s) 399
BspT107I GGYRCC 1 cut(s) 762
BsrBI CCGCTC 1 cut(s) 1776
BsrDI GCAATG 3 cut(s) 1231, 1456, 2002
BsrFI RCCGGY 1 cut(s) 145
BsrI ACTGG 3 cut(s) 865, 1483, 2133
BssAI RCCGGY 1 cut(s) 145
BssECI CCNNGG 3 cut(s) 183, 1317, 2016
BssSI CACGAG 2 cut(s) 278, 1022
BssT1I CCWWGG 1 cut(s) 183
Bst2BI CACGAG 2 cut(s) 278, 1022
Bst2UI CCWGG 7 cut(s) 887, 1565, 1671, 1676, 1800, 1870, 1929
Bst4CI ACNGT 6 cut(s) 25, 482, 775, 1506, 1862, 2011
Bst6I CTCTTC 5 cut(s) 90, 255, 399, 419, 2100
BstAPI GCANNNNNTGC 1 cut(s) 808
BstBAI YACGTR 1 cut(s) 839
BstC8I GCNNGC 2 cut(s) 414, 1774
BstDEI CTNAG 8 cut(s) 404, 524, 1013, 1095, 1157, 1401, 1442, 1982
BstF5I GGATG 3 cut(s) 430, 1769, 2107
BstH2I RGCGCY 1 cut(s) 503
BstHHI GCGC 2 cut(s) 502, 564
BstMWI GCNNNNNNNGC 6 cut(s) 499, 808, 1018, 1081, 1090, 2120
BstNI CCWGG 7 cut(s) 887, 1565, 1671, 1676, 1800, 1870, 1929
BstSCI CCNGG 8 cut(s) 885, 1563, 1669, 1674, 1798, 1868, 1927, 2015
BstSLI GKGCMC 2 cut(s) 559, 1724
BstV1I GCAGC 2 cut(s) 1931, 2042
BstV2I GAAGAC 1 cut(s) 23
BstX2I RGATCY 2 cut(s) 1405, 1438
BstYI RGATCY 2 cut(s) 1405, 1438
Bsu15I ATCGAT 2 cut(s) 1906, 1954
Bsu36I CCTNAGG 1 cut(s) 1401
BsuI GTATCC 1 cut(s) 2143
BsuRI GGCC 5 cut(s) 149, 1093, 1482, 1674, 1788
BsuTUI ATCGAT 2 cut(s) 1906, 1954
BtrI CACGTC 3 cut(s) 360, 640, 1195
BtsCI GGATG 3 cut(s) 430, 1769, 2107
BtsI GCAGTG 1 cut(s) 557
BtsIMutI CAGTG 5 cut(s) 557, 858, 1476, 1583, 1659
Cac8I GCNNGC 2 cut(s) 414, 1774
CciI TCATGA 1 cut(s) 699
CfoI GCGC 2 cut(s) 502, 564
Cfr10I RCCGGY 1 cut(s) 145
Cfr13I GGNCC 2 cut(s) 883, 1802
ClaI ATCGAT 2 cut(s) 1906, 1954
CsiI ACCWGGT 1 cut(s) 1927
Csp6I GTAC 5 cut(s) 218, 836, 984, 1337, 2126
CviAII CATG 9 cut(s) 700, 755, 803, 959, 1080, 1114, 1696, 1809, 2059
CviQI GTAC 5 cut(s) 218, 836, 984, 1337, 2126
DdeI CTNAG 8 cut(s) 404, 524, 1013, 1095, 1157, 1401, 1442, 1982
EaeI YGGCCR 1 cut(s) 147
Eam1104I CTCTTC 5 cut(s) 90, 255, 399, 419, 2100
EarI CTCTTC 5 cut(s) 90, 255, 399, 419, 2100
Eco130I CCWWGG 1 cut(s) 183
Eco147I AGGCCT 1 cut(s) 1674
Eco32I GATATC 1 cut(s) 136
Eco47I GGWCC 2 cut(s) 883, 1802
Eco47III AGCGCT 1 cut(s) 501
Eco57I CTGAAG 5 cut(s) 380, 403, 964, 1364, 1511
Eco81I CCTNAGG 1 cut(s) 1401
Eco88I CYCGRG 2 cut(s) 1280, 1409
EcoRII CCWGG 7 cut(s) 885, 1563, 1669, 1674, 1798, 1868, 1927
EcoRV GATATC 1 cut(s) 136
EcoT14I CCWWGG 1 cut(s) 183
EcoT22I ATGCAT 1 cut(s) 804
ErhI CCWWGG 1 cut(s) 183
FaeI CATG 9 cut(s) 703, 758, 806, 962, 1083, 1117, 1699, 1812, 2062
FalI AAGNNNNNCTT 4 cut(s) 378, 410, 962, 994
FaqI GGGAC 1 cut(s) 896
FatI CATG 9 cut(s) 699, 754, 802, 958, 1079, 1113, 1695, 1808, 2058
FauNDI CATATG 1 cut(s) 1710
FbaI TGATCA 1 cut(s) 2161
Fnu4HI GCNGC 3 cut(s) 208, 1920, 2056
FokI GGATG 3 cut(s) 417, 1776, 2114
Fsp4HI GCNGC 3 cut(s) 208, 1920, 2056
FspBI CTAG 5 cut(s) 257, 497, 975, 1106, 1142
FspI TGCGCA 1 cut(s) 563
GlaI GCGC 2 cut(s) 501, 563
GluI GCNGC 3 cut(s) 208, 1920, 2056
HaeII RGCGCY 1 cut(s) 503
HaeIII GGCC 5 cut(s) 149, 1093, 1482, 1674, 1788
HapII CCGG 2 cut(s) 146, 2016
HhaI GCGC 2 cut(s) 502, 564
Hin1II CATG 9 cut(s) 703, 758, 806, 962, 1083, 1117, 1699, 1812, 2062
Hin6I GCGC 2 cut(s) 500, 562
HinP1I GCGC 2 cut(s) 500, 562
HincII GTYRAC 1 cut(s) 1689
HindII GTYRAC 1 cut(s) 1689
HindIII AAGCTT 3 cut(s) 58, 602, 1523
HpaI GTTAAC 1 cut(s) 1689
HpaII CCGG 2 cut(s) 146, 2016
HphI GGTGA 4 cut(s) 1245, 1316, 1943, 2108
Hpy166II GTNNAC 5 cut(s) 557, 1044, 1324, 1689, 1722
Hpy188I TCNGA 9 cut(s) 967, 1158, 1192, 1318, 1612, 1641, 2068, 2166, 2180
Hpy8I GTNNAC 5 cut(s) 557, 1044, 1324, 1689, 1722
HpyCH4III ACNGT 6 cut(s) 25, 482, 775, 1506, 1862, 2011
HpyCH4IV ACGT 7 cut(s) 359, 639, 838, 868, 903, 933, 1194
HpyF10VI GCNNNNNNNGC 6 cut(s) 499, 808, 1018, 1081, 1090, 2120
HpyF3I CTNAG 8 cut(s) 404, 524, 1013, 1095, 1157, 1401, 1442, 1982
HpySE526I ACGT 7 cut(s) 359, 639, 838, 868, 903, 933, 1194
Hsp92II CATG 9 cut(s) 703, 758, 806, 962, 1083, 1117, 1699, 1812, 2062
HspAI GCGC 2 cut(s) 500, 562
Ksp22I TGATCA 1 cut(s) 2161
KspAI GTTAAC 1 cut(s) 1689
LguI GCTCTTC 1 cut(s) 399
LmnI GCTCC 2 cut(s) 1497, 2119
Lsp1109I GCAGC 2 cut(s) 1931, 2042
LweI GCATC 5 cut(s) 993, 1381, 1645, 1726, 2059
MabI ACCWGGT 1 cut(s) 1927
MaeI CTAG 5 cut(s) 257, 497, 975, 1106, 1142
MaeII ACGT 7 cut(s) 359, 639, 838, 868, 903, 933, 1194
MaeIII GTNAC 5 cut(s) 310, 769, 911, 1474, 2155
MbiI CCGCTC 1 cut(s) 1776
MfeI CAATTG 1 cut(s) 329
MflI RGATCY 2 cut(s) 1405, 1438
MhlI GDGCHC 2 cut(s) 559, 1724
MlyI GAGTC 9 cut(s) 236, 290, 436, 936, 971, 1168, 1181, 1874, 1931
MmeI TCCRAC 3 cut(s) 1488, 1536, 1780
Mph1103I ATGCAT 1 cut(s) 804
MroXI GAANNNNTTC 1 cut(s) 393
MseI TTAA 9 cut(s) 108, 606, 1128, 1221, 1353, 1382, 1688, 1814, 2139
MslI CAYNNNNRTG 1 cut(s) 1084
MspI CCGG 2 cut(s) 146, 2016
MspR9I CCNGG 8 cut(s) 887, 1565, 1671, 1676, 1800, 1870, 1929, 2017
MunI CAATTG 1 cut(s) 329
Mva1269I GAATGC 1 cut(s) 1602
MvaI CCWGG 7 cut(s) 887, 1565, 1671, 1676, 1800, 1870, 1929
MwoI GCNNNNNNNGC 6 cut(s) 499, 808, 1018, 1081, 1090, 2120
NciI CCSGG 1 cut(s) 2017
NdeI CATATG 1 cut(s) 1710
NlaIII CATG 9 cut(s) 703, 758, 806, 962, 1083, 1117, 1699, 1812, 2062
NlaIV GGNNCC 4 cut(s) 181, 764, 884, 2115
NmuCI GTSAC 1 cut(s) 1474
NsbI TGCGCA 1 cut(s) 563
NsiI ATGCAT 1 cut(s) 804
PaeR7I CTCGAG 1 cut(s) 1280
PagI TCATGA 1 cut(s) 699
PceI AGGCCT 1 cut(s) 1674
PciSI GCTCTTC 1 cut(s) 399
PctI GAATGC 1 cut(s) 1602
PdmI GAANNNNTTC 1 cut(s) 393
PfeI GAWTC 5 cut(s) 1573, 1705, 1951, 2063, 2181
PflFI GACNNNGTC 1 cut(s) 695
PfoI TCCNGGA 2 cut(s) 1563, 1798
PkrI GCNGC 3 cut(s) 209, 1921, 2057
PleI GAGTC 9 cut(s) 236, 289, 435, 936, 970, 1167, 1181, 1873, 1931
PpsI GAGTC 9 cut(s) 236, 289, 435, 936, 970, 1167, 1181, 1873, 1931
Ppu21I YACGTR 1 cut(s) 839
PsiI TTATAA 1 cut(s) 797
Psp1406I AACGTT 1 cut(s) 868
Psp6I CCWGG 7 cut(s) 885, 1563, 1669, 1674, 1798, 1868, 1927
PspGI CCWGG 7 cut(s) 885, 1563, 1669, 1674, 1798, 1868, 1927
PspN4I GGNNCC 4 cut(s) 181, 764, 884, 2115
PspPI GGNCC 2 cut(s) 883, 1802
PsuI RGATCY 2 cut(s) 1405, 1438
PsyI GACNNNGTC 1 cut(s) 695
RsaI GTAC 5 cut(s) 219, 837, 985, 1338, 2127
RsaNI GTAC 5 cut(s) 218, 836, 984, 1337, 2126
RseI CAYNNNNRTG 1 cut(s) 1084
SapI GCTCTTC 1 cut(s) 399
SaqAI TTAA 9 cut(s) 108, 606, 1128, 1221, 1353, 1382, 1688, 1814, 2139
SatI GCNGC 3 cut(s) 208, 1920, 2056
Sau96I GGNCC 2 cut(s) 883, 1802
SchI GAGTC 9 cut(s) 236, 290, 436, 936, 971, 1168, 1181, 1874, 1931
ScrFI CCNGG 8 cut(s) 887, 1565, 1671, 1676, 1800, 1870, 1929, 2017
SduI GDGCHC 2 cut(s) 559, 1724
SexAI ACCWGGT 1 cut(s) 1927
SfaNI GCATC 5 cut(s) 993, 1381, 1645, 1726, 2059
Sfr274I CTCGAG 1 cut(s) 1280
SinI GGWCC 2 cut(s) 883, 1802
SlaI CTCGAG 1 cut(s) 1280
SmiMI CAYNNNNRTG 1 cut(s) 1084
SmlI CTYRAG 2 cut(s) 1202, 1280
SmoI CTYRAG 2 cut(s) 1202, 1280
SseBI AGGCCT 1 cut(s) 1674
SsiI CCGC 3 cut(s) 207, 1006, 1776
SspI AATATT 2 cut(s) 708, 1358
SspMI CTAG 5 cut(s) 257, 497, 975, 1106, 1142
StuI AGGCCT 1 cut(s) 1674
StyD4I CCNGG 8 cut(s) 885, 1563, 1669, 1674, 1798, 1868, 1927, 2015
StyI CCWWGG 1 cut(s) 183
TaaI ACNGT 6 cut(s) 25, 482, 775, 1506, 1862, 2011
TaiI ACGT 7 cut(s) 362, 642, 841, 871, 906, 936, 1197
TaqI TCGA 7 cut(s) 292, 814, 1152, 1281, 1619, 1906, 1954
TatI WGTACW 3 cut(s) 983, 1336, 2125
TauI GCSGC 1 cut(s) 210
TfiI GAWTC 5 cut(s) 1573, 1705, 1951, 2063, 2181
Tru1I TTAA 9 cut(s) 108, 606, 1128, 1221, 1353, 1382, 1688, 1814, 2139
Tru9I TTAA 9 cut(s) 108, 606, 1128, 1221, 1353, 1382, 1688, 1814, 2139
TscAI CASTG 5 cut(s) 564, 865, 1483, 1583, 1666
TseFI GTSAC 1 cut(s) 1474
TseI GCWGC 2 cut(s) 1919, 2055
Tsp45I GTSAC 1 cut(s) 1474
TspGWI ACGGA 3 cut(s) 941, 1199, 2125
TspRI CASTG 5 cut(s) 564, 865, 1483, 1583, 1666
Tth111I GACNNNGTC 1 cut(s) 695
VneI GTGCAC 2 cut(s) 555, 1720
VpaK11BI GGWCC 2 cut(s) 883, 1802
XapI RAATTY 3 cut(s) 1540, 1665, 2174
XbaI TCTAGA 1 cut(s) 1105
XhoI CTCGAG 1 cut(s) 1280
XmnI GAANNNNTTC 1 cut(s) 393
XspI CTAG 5 cut(s) 257, 497, 975, 1106, 1142
Zsp2I ATGCAT 1 cut(s) 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.