TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1238 |
| AccB1I | GGYRCC | 1 cut(s) | 1238 |
| AccI | GTMKAC | 2 cut(s) | 766, 968 |
| AciI | CCGC | 1 cut(s) | 1765 |
| AcsI | RAATTY | 6 cut(s) | 19, 338, 433, 1206, 1429, 1602 |
| AfaI | GTAC | 7 cut(s) | 230, 606, 621, 1107, 1240, 1369, 1736 |
| AfeI | AGCGCT | 1 cut(s) | 641 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 686, 919, 1087 |
| AflII | CTTAAG | 2 cut(s) | 455, 1085 |
| AhlI | ACTAGT | 2 cut(s) | 41, 1370 |
| AjnI | CCWGG | 2 cut(s) | 1009, 1302 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1436, 1468 |
| AluBI | AGCT | 7 cut(s) | 534, 634, 676, 711, 841, 1787, 1812 |
| AluI | AGCT | 7 cut(s) | 534, 634, 676, 711, 841, 1787, 1812 |
| Alw21I | GWGCWC | 1 cut(s) | 546 |
| Alw26I | GTCTC | 2 cut(s) | 32, 1252 |
| Ama87I | CYCGRG | 1 cut(s) | 635 |
| Aor51HI | AGCGCT | 1 cut(s) | 641 |
| AoxI | GGCC | 1 cut(s) | 1590 |
| ApeKI | GCWGC | 2 cut(s) | 234, 673 |
| ApoI | RAATTY | 6 cut(s) | 19, 338, 433, 1206, 1429, 1602 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 234, 266, 1029, 1061 |
| AseI | ATTAAT | 1 cut(s) | 1353 |
| Asp718I | GGTACC | 1 cut(s) | 1238 |
| AspLEI | GCGC | 1 cut(s) | 642 |
| AspS9I | GGNCC | 2 cut(s) | 1477, 1590 |
| AsuHPI | GGTGA | 4 cut(s) | 442, 988, 1513, 1729 |
| AsuII | TTCGAA | 2 cut(s) | 335, 939 |
| AvaI | CYCGRG | 1 cut(s) | 635 |
| AvaII | GGWCC | 1 cut(s) | 1477 |
| AxyI | CCTNAGG | 1 cut(s) | 685 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1222, 1230, 1255, 1263 |
| BanI | GGYRCC | 1 cut(s) | 1238 |
| BauI | CACGAG | 2 cut(s) | 1317, 1333 |
| BbsI | GAAGAC | 1 cut(s) | 1207 |
| Bbv12I | GWGCWC | 1 cut(s) | 546 |
| BbvI | GCAGC | 2 cut(s) | 246, 685 |
| BccI | CCATC | 6 cut(s) | 141, 410, 506, 578, 1161, 1681 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 914, 948, 1014, 1048 |
| BciT130I | CCWGG | 2 cut(s) | 1011, 1304 |
| BciVI | GTATCC | 1 cut(s) | 113 |
| BcoDI | GTCTC | 2 cut(s) | 32, 1252 |
| BcuI | ACTAGT | 2 cut(s) | 41, 1370 |
| BfaI | CTAG | 6 cut(s) | 42, 626, 791, 1371, 1788, 1813 |
| BfoI | RGCGCY | 1 cut(s) | 643 |
| BfrI | CTTAAG | 2 cut(s) | 455, 1085 |
| BfuI | GTATCC | 1 cut(s) | 113 |
| BglII | AGATCT | 1 cut(s) | 409 |
| BisI | GCNGC | 2 cut(s) | 235, 674 |
| BlsI | GCNGC | 2 cut(s) | 236, 675 |
| Bme1390I | CCNGG | 2 cut(s) | 1011, 1304 |
| Bme18I | GGWCC | 1 cut(s) | 1477 |
| BmeT110I | CYCGRG | 1 cut(s) | 635 |
| BmgT120I | GGNCC | 2 cut(s) | 1477, 1590 |
| BmiI | GGNNCC | 3 cut(s) | 812, 1183, 1240 |
| BmrFI | CCNGG | 2 cut(s) | 1011, 1304 |
| BmsI | GCATC | 2 cut(s) | 569, 936 |
| BpiI | GAAGAC | 1 cut(s) | 1207 |
| Bpu14I | TTCGAA | 2 cut(s) | 335, 939 |
| BpuEI | CTTGAG | 2 cut(s) | 371, 398 |
| BsaJI | CCNNGG | 2 cut(s) | 467, 1362 |
| BsaWI | WCCGGW | 1 cut(s) | 1498 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1693, 1723 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 686, 919, 1087 |
| Bse1I | ACTGG | 2 cut(s) | 185, 570 |
| Bse21I | CCTNAGG | 1 cut(s) | 685 |
| BseBI | CCWGG | 2 cut(s) | 1011, 1304 |
| BseDI | CCNNGG | 2 cut(s) | 467, 1362 |
| BseGI | GGATG | 4 cut(s) | 951, 1172, 1666, 1698 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 686, 919, 1087 |
| BseMII | CTCAG | 5 cut(s) | 71, 253, 310, 531, 838 |
| BseNI | ACTGG | 2 cut(s) | 185, 570 |
| BseRI | GAGGAG | 6 cut(s) | 484, 1124, 1305, 1711, 1714, 1738 |
| BseXI | GCAGC | 2 cut(s) | 246, 685 |
| BseYI | CCCAGC | 2 cut(s) | 113, 1423 |
| BsgI | GTGCAG | 1 cut(s) | 899 |
| Bsh1285I | CGRYCG | 1 cut(s) | 618 |
| BshFI | GGCC | 1 cut(s) | 1592 |
| BshNI | GGYRCC | 1 cut(s) | 1238 |
| BsiEI | CGRYCG | 1 cut(s) | 618 |
| BsiHKAI | GWGCWC | 1 cut(s) | 546 |
| BsiHKCI | CYCGRG | 1 cut(s) | 635 |
| BsiSI | CCGG | 1 cut(s) | 1499 |
| BslFI | GGGAC | 1 cut(s) | 1050 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 686, 919, 1087 |
| BsmAI | GTCTC | 2 cut(s) | 32, 1252 |
| BsmFI | GGGAC | 1 cut(s) | 1050 |
| BsmI | GAATGC | 1 cut(s) | 935 |
| BsnI | GGCC | 1 cut(s) | 1592 |
| BsoBI | CYCGRG | 1 cut(s) | 635 |
| Bsp119I | TTCGAA | 2 cut(s) | 335, 939 |
| Bsp1286I | GDGCHC | 1 cut(s) | 546 |
| Bsp143I | GATC | 4 cut(s) | 310, 409, 615, 1413 |
| BspACI | CCGC | 1 cut(s) | 1765 |
| BspANI | GGCC | 1 cut(s) | 1592 |
| BspCNI | CTCAG | 5 cut(s) | 72, 252, 309, 532, 837 |
| BspLI | GGNNCC | 3 cut(s) | 812, 1183, 1240 |
| BspQI | GCTCTTC | 1 cut(s) | 468 |
| BspT104I | TTCGAA | 2 cut(s) | 335, 939 |
| BspT107I | GGYRCC | 1 cut(s) | 1238 |
| BspTI | CTTAAG | 2 cut(s) | 455, 1085 |
| BsrI | ACTGG | 2 cut(s) | 185, 570 |
| BssECI | CCNNGG | 2 cut(s) | 467, 1362 |
| BssMI | GATC | 4 cut(s) | 310, 409, 615, 1413 |
| BssSI | CACGAG | 2 cut(s) | 1317, 1333 |
| BssT1I | CCWWGG | 1 cut(s) | 1362 |
| Bst2BI | CACGAG | 2 cut(s) | 1317, 1333 |
| Bst2UI | CCWGG | 2 cut(s) | 1011, 1304 |
| Bst4CI | ACNGT | 4 cut(s) | 195, 374, 446, 976 |
| Bst6I | CTCTTC | 4 cut(s) | 468, 579, 1121, 1404 |
| BstAFI | CTTAAG | 2 cut(s) | 455, 1085 |
| BstBI | TTCGAA | 2 cut(s) | 335, 939 |
| BstC8I | GCNNGC | 3 cut(s) | 111, 158, 1016 |
| BstDEI | CTNAG | 7 cut(s) | 80, 239, 296, 540, 685, 824, 1594 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 684, 1085 |
| BstF5I | GGATG | 4 cut(s) | 951, 1172, 1666, 1698 |
| BstH2I | RGCGCY | 1 cut(s) | 643 |
| BstHHI | GCGC | 1 cut(s) | 642 |
| BstKTI | GATC | 4 cut(s) | 313, 412, 618, 1416 |
| BstMAI | GTCTC | 2 cut(s) | 32, 1252 |
| BstMBI | GATC | 4 cut(s) | 310, 409, 615, 1413 |
| BstMCI | CGRYCG | 1 cut(s) | 618 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 819, 828 |
| BstNI | CCWGG | 2 cut(s) | 1011, 1304 |
| BstNSI | RCATGY | 2 cut(s) | 226, 967 |
| BstSCI | CCNGG | 2 cut(s) | 1009, 1302 |
| BstV1I | GCAGC | 2 cut(s) | 246, 685 |
| BstV2I | GAAGAC | 1 cut(s) | 1207 |
| BstX2I | RGATCY | 1 cut(s) | 409 |
| BstYI | RGATCY | 1 cut(s) | 409 |
| Bsu36I | CCTNAGG | 1 cut(s) | 685 |
| BsuI | GTATCC | 1 cut(s) | 113 |
| BsuRI | GGCC | 1 cut(s) | 1592 |
| BtsCI | GGATG | 4 cut(s) | 951, 1172, 1666, 1698 |
| BtsIMutI | CAGTG | 1 cut(s) | 563 |
| Cac8I | GCNNGC | 3 cut(s) | 111, 158, 1016 |
| CfoI | GCGC | 1 cut(s) | 642 |
| Cfr13I | GGNCC | 2 cut(s) | 1477, 1590 |
| Csp6I | GTAC | 7 cut(s) | 229, 605, 620, 1106, 1239, 1368, 1735 |
| CviAII | CATG | 8 cut(s) | 161, 223, 578, 919, 964, 1186, 1226, 1481 |
| CviQI | GTAC | 7 cut(s) | 229, 605, 620, 1106, 1239, 1368, 1735 |
| DdeI | CTNAG | 7 cut(s) | 80, 239, 296, 540, 685, 824, 1594 |
| DpnI | GATC | 4 cut(s) | 312, 411, 617, 1415 |
| DpnII | GATC | 4 cut(s) | 310, 409, 615, 1413 |
| DraI | TTTAAA | 2 cut(s) | 18, 1030 |
| Eam1104I | CTCTTC | 4 cut(s) | 468, 579, 1121, 1404 |
| EarI | CTCTTC | 4 cut(s) | 468, 579, 1121, 1404 |
| Eco130I | CCWWGG | 1 cut(s) | 1362 |
| Eco47I | GGWCC | 1 cut(s) | 1477 |
| Eco47III | AGCGCT | 1 cut(s) | 641 |
| Eco81I | CCTNAGG | 1 cut(s) | 685 |
| Eco88I | CYCGRG | 1 cut(s) | 635 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 684, 1085 |
| EcoRII | CCWGG | 2 cut(s) | 1009, 1302 |
| EcoT14I | CCWWGG | 1 cut(s) | 1362 |
| ErhI | CCWWGG | 1 cut(s) | 1362 |
| FaeI | CATG | 8 cut(s) | 164, 226, 581, 922, 967, 1189, 1229, 1484 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 30 |
| FaqI | GGGAC | 1 cut(s) | 1050 |
| FatI | CATG | 8 cut(s) | 160, 222, 577, 918, 963, 1185, 1225, 1480 |
| FblI | GTMKAC | 2 cut(s) | 766, 968 |
| Fnu4HI | GCNGC | 2 cut(s) | 235, 674 |
| FokI | GGATG | 4 cut(s) | 958, 1179, 1673, 1705 |
| Fsp4HI | GCNGC | 2 cut(s) | 235, 674 |
| FspBI | CTAG | 6 cut(s) | 42, 626, 791, 1371, 1788, 1813 |
| GlaI | GCGC | 1 cut(s) | 641 |
| GluI | GCNGC | 2 cut(s) | 235, 674 |
| GsaI | CCCAGC | 2 cut(s) | 117, 1427 |
| HaeII | RGCGCY | 1 cut(s) | 643 |
| HaeIII | GGCC | 1 cut(s) | 1592 |
| HapII | CCGG | 1 cut(s) | 1499 |
| HhaI | GCGC | 1 cut(s) | 642 |
| Hin1II | CATG | 8 cut(s) | 164, 226, 581, 922, 967, 1189, 1229, 1484 |
| Hin6I | GCGC | 1 cut(s) | 640 |
| HinP1I | GCGC | 1 cut(s) | 640 |
| HincII | GTYRAC | 4 cut(s) | 200, 969, 1231, 1330 |
| HindII | GTYRAC | 4 cut(s) | 200, 969, 1231, 1330 |
| HindIII | AAGCTT | 3 cut(s) | 532, 709, 839 |
| HpaII | CCGG | 1 cut(s) | 1499 |
| HphI | GGTGA | 4 cut(s) | 442, 988, 1513, 1729 |
| Hpy166II | GTNNAC | 7 cut(s) | 200, 394, 695, 767, 969, 1231, 1330 |
| Hpy188I | TCNGA | 7 cut(s) | 242, 291, 407, 468, 541, 993, 1444 |
| Hpy188III | TCNNGA | 9 cut(s) | 350, 415, 509, 522, 791, 880, 1035, 1319, 1777 |
| Hpy8I | GTNNAC | 7 cut(s) | 200, 394, 695, 767, 969, 1231, 1330 |
| HpyAV | CCTTC | 6 cut(s) | 621, 690, 824, 1091, 1229, 1762 |
| HpyCH4III | ACNGT | 4 cut(s) | 195, 374, 446, 976 |
| HpyCH4IV | ACGT | 3 cut(s) | 102, 787, 1326 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 819, 828 |
| HpyF3I | CTNAG | 7 cut(s) | 80, 239, 296, 540, 685, 824, 1594 |
| HpySE526I | ACGT | 3 cut(s) | 102, 787, 1326 |
| Hsp92II | CATG | 8 cut(s) | 164, 226, 581, 922, 967, 1189, 1229, 1484 |
| HspAI | GCGC | 1 cut(s) | 640 |
| KpnI | GGTACC | 1 cut(s) | 1242 |
| Kzo9I | GATC | 4 cut(s) | 310, 409, 615, 1413 |
| LguI | GCTCTTC | 1 cut(s) | 468 |
| LmnI | GCTCC | 4 cut(s) | 93, 810, 1181, 1318 |
| Lsp1109I | GCAGC | 2 cut(s) | 246, 685 |
| LweI | GCATC | 2 cut(s) | 569, 936 |
| MaeI | CTAG | 6 cut(s) | 42, 626, 791, 1371, 1788, 1813 |
| MaeII | ACGT | 3 cut(s) | 102, 787, 1326 |
| MaeIII | GTNAC | 2 cut(s) | 568, 783 |
| MalI | GATC | 4 cut(s) | 312, 411, 617, 1415 |
| MboI | GATC | 4 cut(s) | 310, 409, 615, 1413 |
| MboII | GAAGA | 9 cut(s) | 455, 566, 1108, 1212, 1421, 1475, 1516, 1652, 1756 |
| MflI | RGATCY | 1 cut(s) | 409 |
| MhlI | GDGCHC | 1 cut(s) | 546 |
| MlyI | GAGTC | 3 cut(s) | 37, 427, 1032 |
| MmeI | TCCRAC | 2 cut(s) | 115, 1422 |
| MslI | CAYNNNNRTG | 2 cut(s) | 582, 1065 |
| MspCI | CTTAAG | 2 cut(s) | 455, 1085 |
| MspI | CCGG | 1 cut(s) | 1499 |
| MspR9I | CCNGG | 2 cut(s) | 1011, 1304 |
| Mva1269I | GAATGC | 1 cut(s) | 935 |
| MvaI | CCWGG | 2 cut(s) | 1011, 1304 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 819, 828 |
| NdeII | GATC | 4 cut(s) | 310, 409, 615, 1413 |
| NlaIII | CATG | 8 cut(s) | 164, 226, 581, 922, 967, 1189, 1229, 1484 |
| NlaIV | GGNNCC | 3 cut(s) | 812, 1183, 1240 |
| NmuCI | GTSAC | 1 cut(s) | 568 |
| NspI | RCATGY | 2 cut(s) | 226, 967 |
| NspV | TTCGAA | 2 cut(s) | 335, 939 |
| PaeR7I | CTCGAG | 1 cut(s) | 635 |
| PciSI | GCTCTTC | 1 cut(s) | 468 |
| PctI | GAATGC | 1 cut(s) | 935 |
| PfeI | GAWTC | 7 cut(s) | 165, 286, 292, 525, 979, 1189, 1705 |
| PkrI | GCNGC | 2 cut(s) | 236, 675 |
| Ple19I | CGATCG | 1 cut(s) | 618 |
| PleI | GAGTC | 3 cut(s) | 36, 426, 1032 |
| PpsI | GAGTC | 3 cut(s) | 36, 426, 1032 |
| PshBI | ATTAAT | 1 cut(s) | 1353 |
| Psp6I | CCWGG | 2 cut(s) | 1009, 1302 |
| PspFI | CCCAGC | 2 cut(s) | 113, 1423 |
| PspGI | CCWGG | 2 cut(s) | 1009, 1302 |
| PspN4I | GGNNCC | 3 cut(s) | 812, 1183, 1240 |
| PspPI | GGNCC | 2 cut(s) | 1477, 1590 |
| PspXI | VCTCGAGB | 1 cut(s) | 635 |
| PsuI | RGATCY | 1 cut(s) | 409 |
| PvuI | CGATCG | 1 cut(s) | 618 |
| RsaI | GTAC | 7 cut(s) | 230, 606, 621, 1107, 1240, 1369, 1736 |
| RsaNI | GTAC | 7 cut(s) | 229, 605, 620, 1106, 1239, 1368, 1735 |
| RseI | CAYNNNNRTG | 2 cut(s) | 582, 1065 |
| SalI | GTCGAC | 1 cut(s) | 967 |
| SapI | GCTCTTC | 1 cut(s) | 468 |
| SatI | GCNGC | 2 cut(s) | 235, 674 |
| Sau3AI | GATC | 4 cut(s) | 310, 409, 615, 1413 |
| Sau96I | GGNCC | 2 cut(s) | 1477, 1590 |
| SchI | GAGTC | 3 cut(s) | 37, 427, 1032 |
| ScrFI | CCNGG | 2 cut(s) | 1011, 1304 |
| SduI | GDGCHC | 1 cut(s) | 546 |
| SfaNI | GCATC | 2 cut(s) | 569, 936 |
| Sfr274I | CTCGAG | 1 cut(s) | 635 |
| SfuI | TTCGAA | 2 cut(s) | 335, 939 |
| SinI | GGWCC | 1 cut(s) | 1477 |
| SlaI | CTCGAG | 1 cut(s) | 635 |
| SmiI | ATTTAAAT | 1 cut(s) | 1030 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 582, 1065 |
| SmlI | CTYRAG | 5 cut(s) | 350, 413, 455, 635, 1085 |
| SmoI | CTYRAG | 5 cut(s) | 350, 413, 455, 635, 1085 |
| SpeI | ACTAGT | 2 cut(s) | 41, 1370 |
| SsiI | CCGC | 1 cut(s) | 1765 |
| SspMI | CTAG | 6 cut(s) | 42, 626, 791, 1371, 1788, 1813 |
| StyD4I | CCNGG | 2 cut(s) | 1009, 1302 |
| StyI | CCWWGG | 1 cut(s) | 1362 |
| SwaI | ATTTAAAT | 1 cut(s) | 1030 |
| TaaI | ACNGT | 4 cut(s) | 195, 374, 446, 976 |
| TaiI | ACGT | 3 cut(s) | 105, 790, 1329 |
| TaqI | TCGA | 9 cut(s) | 26, 219, 335, 510, 614, 636, 879, 939, 968 |
| TatI | WGTACW | 1 cut(s) | 228 |
| TfiI | GAWTC | 7 cut(s) | 165, 286, 292, 525, 979, 1189, 1705 |
| TscAI | CASTG | 1 cut(s) | 570 |
| TseFI | GTSAC | 1 cut(s) | 568 |
| TseI | GCWGC | 2 cut(s) | 234, 673 |
| Tsp45I | GTSAC | 1 cut(s) | 568 |
| TspDTI | ATGAA | 4 cut(s) | 86, 169, 566, 1653 |
| TspGWI | ACGGA | 1 cut(s) | 1280 |
| TspRI | CASTG | 1 cut(s) | 570 |
| Vha464I | CTTAAG | 2 cut(s) | 455, 1085 |
| VpaK11BI | GGWCC | 1 cut(s) | 1477 |
| VspI | ATTAAT | 1 cut(s) | 1353 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 684, 1085 |
| XapI | RAATTY | 6 cut(s) | 19, 338, 433, 1206, 1429, 1602 |
| XbaI | TCTAGA | 1 cut(s) | 790 |
| XceI | RCATGY | 2 cut(s) | 226, 967 |
| XhoI | CTCGAG | 1 cut(s) | 635 |
| XmiI | GTMKAC | 2 cut(s) | 766, 968 |
| XspI | CTAG | 6 cut(s) | 42, 626, 791, 1371, 1788, 1813 |