TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 157 - 259 | 4.1e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 195 |
| AciI | CCGC | 1 cut(s) | 711 |
| AclWI | GGATC | 1 cut(s) | 585 |
| AcsI | RAATTY | 3 cut(s) | 455, 691, 698 |
| AfaI | GTAC | 2 cut(s) | 177, 670 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 727 |
| AgsI | TTSAA | 7 cut(s) | 284, 347, 418, 509, 635, 697, 775 |
| AhlI | ACTAGT | 1 cut(s) | 142 |
| AluBI | AGCT | 3 cut(s) | 40, 385, 631 |
| AluI | AGCT | 3 cut(s) | 40, 385, 631 |
| Alw26I | GTCTC | 1 cut(s) | 422 |
| AlwI | GGATC | 1 cut(s) | 585 |
| ApeKI | GCWGC | 1 cut(s) | 654 |
| ApoI | RAATTY | 3 cut(s) | 455, 691, 698 |
| AspS9I | GGNCC | 1 cut(s) | 271 |
| AsuHPI | GGTGA | 3 cut(s) | 246, 317, 373 |
| AvaII | GGWCC | 1 cut(s) | 271 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 276, 308 |
| BbvI | GCAGC | 1 cut(s) | 641 |
| BccI | CCATC | 2 cut(s) | 547, 579 |
| BclI | TGATCA | 1 cut(s) | 130 |
| BcoDI | GTCTC | 1 cut(s) | 422 |
| BcuI | ACTAGT | 1 cut(s) | 142 |
| BfaI | CTAG | 3 cut(s) | 143, 203, 609 |
| BfmI | CTRYAG | 1 cut(s) | 546 |
| BisI | GCNGC | 2 cut(s) | 655, 711 |
| BlsI | GCNGC | 2 cut(s) | 656, 712 |
| Bme18I | GGWCC | 1 cut(s) | 271 |
| BmgT120I | GGNCC | 1 cut(s) | 271 |
| BmiI | GGNNCC | 1 cut(s) | 273 |
| BmsI | GCATC | 1 cut(s) | 86 |
| BpmI | CTGGAG | 1 cut(s) | 317 |
| BsaJI | CCNNGG | 1 cut(s) | 398 |
| BsaWI | WCCGGW | 1 cut(s) | 256 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 727 |
| Bse1I | ACTGG | 4 cut(s) | 177, 273, 300, 448 |
| Bse3DI | GCAATG | 1 cut(s) | 333 |
| BseDI | CCNNGG | 1 cut(s) | 398 |
| BseGI | GGATG | 2 cut(s) | 101, 590 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 727 |
| BseMI | GCAATG | 1 cut(s) | 333 |
| BseMII | CTCAG | 1 cut(s) | 241 |
| BseNI | ACTGG | 4 cut(s) | 177, 273, 300, 448 |
| BseXI | GCAGC | 1 cut(s) | 641 |
| BsiSI | CCGG | 1 cut(s) | 257 |
| BslFI | GGGAC | 1 cut(s) | 257 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 727 |
| BsmAI | GTCTC | 1 cut(s) | 422 |
| BsmFI | GGGAC | 1 cut(s) | 257 |
| Bsp143I | GATC | 2 cut(s) | 130, 577 |
| BspACI | CCGC | 1 cut(s) | 711 |
| BspCNI | CTCAG | 1 cut(s) | 240 |
| BspLI | GGNNCC | 1 cut(s) | 273 |
| BspPI | GGATC | 1 cut(s) | 585 |
| BsrDI | GCAATG | 1 cut(s) | 333 |
| BsrI | ACTGG | 4 cut(s) | 177, 273, 300, 448 |
| BssECI | CCNNGG | 1 cut(s) | 398 |
| BssMI | GATC | 2 cut(s) | 130, 577 |
| BssT1I | CCWWGG | 1 cut(s) | 398 |
| Bst4CI | ACNGT | 1 cut(s) | 72 |
| Bst6I | CTCTTC | 3 cut(s) | 279, 399, 438 |
| BstDEI | CTNAG | 4 cut(s) | 11, 227, 386, 614 |
| BstF5I | GGATG | 2 cut(s) | 101, 590 |
| BstKTI | GATC | 2 cut(s) | 133, 580 |
| BstMAI | GTCTC | 1 cut(s) | 422 |
| BstMBI | GATC | 2 cut(s) | 130, 577 |
| BstSFI | CTRYAG | 1 cut(s) | 546 |
| BstV1I | GCAGC | 1 cut(s) | 641 |
| BstX2I | RGATCY | 1 cut(s) | 577 |
| BstYI | RGATCY | 1 cut(s) | 577 |
| BtsCI | GGATG | 2 cut(s) | 101, 590 |
| BtsI | GCAGTG | 1 cut(s) | 167 |
| BtsIMutI | CAGTG | 2 cut(s) | 167, 266 |
| Cfr13I | GGNCC | 1 cut(s) | 271 |
| Csp6I | GTAC | 2 cut(s) | 176, 669 |
| CviAII | CATG | 1 cut(s) | 470 |
| CviJI | RGCY | 6 cut(s) | 40, 385, 447, 612, 631, 654 |
| CviKI_1 | RGCY | 6 cut(s) | 40, 385, 447, 612, 631, 654 |
| CviQI | GTAC | 2 cut(s) | 176, 669 |
| DdeI | CTNAG | 4 cut(s) | 11, 227, 386, 614 |
| DpnI | GATC | 2 cut(s) | 132, 579 |
| DpnII | GATC | 2 cut(s) | 130, 577 |
| DraI | TTTAAA | 1 cut(s) | 105 |
| Eam1104I | CTCTTC | 3 cut(s) | 279, 399, 438 |
| EarI | CTCTTC | 3 cut(s) | 279, 399, 438 |
| Eco130I | CCWWGG | 1 cut(s) | 398 |
| Eco47I | GGWCC | 1 cut(s) | 271 |
| EcoRI | GAATTC | 1 cut(s) | 455 |
| EcoT14I | CCWWGG | 1 cut(s) | 398 |
| ErhI | CCWWGG | 1 cut(s) | 398 |
| FaeI | CATG | 1 cut(s) | 473 |
| FaiI | YATR | 9 cut(s) | 79, 113, 195, 411, 471, 548, 600, 708, 764 |
| FaqI | GGGAC | 1 cut(s) | 257 |
| FatI | CATG | 1 cut(s) | 469 |
| FbaI | TGATCA | 1 cut(s) | 130 |
| Fnu4HI | GCNGC | 2 cut(s) | 655, 711 |
| FokI | GGATG | 2 cut(s) | 108, 597 |
| Fsp4HI | GCNGC | 2 cut(s) | 655, 711 |
| FspBI | CTAG | 3 cut(s) | 143, 203, 609 |
| GluI | GCNGC | 2 cut(s) | 655, 711 |
| GsuI | CTGGAG | 1 cut(s) | 317 |
| HapII | CCGG | 1 cut(s) | 257 |
| Hin1II | CATG | 1 cut(s) | 473 |
| HindIII | AAGCTT | 2 cut(s) | 383, 629 |
| HinfI | GANTC | 6 cut(s) | 15, 223, 322, 430, 562, 785 |
| HpaII | CCGG | 1 cut(s) | 257 |
| HphI | GGTGA | 3 cut(s) | 246, 317, 373 |
| Hpy166II | GTNNAC | 1 cut(s) | 364 |
| Hpy188I | TCNGA | 4 cut(s) | 27, 319, 461, 751 |
| Hpy188III | TCNNGA | 2 cut(s) | 220, 281 |
| Hpy8I | GTNNAC | 1 cut(s) | 364 |
| HpyAV | CCTTC | 3 cut(s) | 29, 674, 769 |
| HpyCH4III | ACNGT | 1 cut(s) | 72 |
| HpyCH4IV | ACGT | 1 cut(s) | 33 |
| HpyCH4V | TGCA | 3 cut(s) | 160, 469, 725 |
| HpyF3I | CTNAG | 4 cut(s) | 11, 227, 386, 614 |
| HpySE526I | ACGT | 1 cut(s) | 33 |
| Hsp92II | CATG | 1 cut(s) | 473 |
| Ksp22I | TGATCA | 1 cut(s) | 130 |
| Kzo9I | GATC | 2 cut(s) | 130, 577 |
| Lsp1109I | GCAGC | 1 cut(s) | 641 |
| LweI | GCATC | 1 cut(s) | 86 |
| MaeI | CTAG | 3 cut(s) | 143, 203, 609 |
| MaeII | ACGT | 1 cut(s) | 33 |
| MalI | GATC | 2 cut(s) | 132, 579 |
| MboI | GATC | 2 cut(s) | 130, 577 |
| MboII | GAAGA | 7 cut(s) | 16, 53, 296, 386, 425, 428, 534 |
| MflI | RGATCY | 1 cut(s) | 577 |
| MluCI | AATT | 7 cut(s) | 246, 455, 589, 691, 698, 715, 742 |
| MlyI | GAGTC | 1 cut(s) | 424 |
| MnlI | CCTC | 6 cut(s) | 181, 292, 340, 377, 466, 552 |
| MseI | TTAA | 5 cut(s) | 74, 104, 212, 249, 647 |
| MspI | CCGG | 1 cut(s) | 257 |
| NdeII | GATC | 2 cut(s) | 130, 577 |
| NlaIII | CATG | 1 cut(s) | 473 |
| NlaIV | GGNNCC | 1 cut(s) | 273 |
| PfeI | GAWTC | 5 cut(s) | 15, 223, 322, 562, 785 |
| PkrI | GCNGC | 2 cut(s) | 656, 712 |
| PleI | GAGTC | 1 cut(s) | 424 |
| PpsI | GAGTC | 1 cut(s) | 424 |
| PsiI | TTATAA | 1 cut(s) | 195 |
| PspN4I | GGNNCC | 1 cut(s) | 273 |
| PspPI | GGNCC | 1 cut(s) | 271 |
| PsuI | RGATCY | 1 cut(s) | 577 |
| RsaI | GTAC | 2 cut(s) | 177, 670 |
| RsaNI | GTAC | 2 cut(s) | 176, 669 |
| SaqAI | TTAA | 5 cut(s) | 74, 104, 212, 249, 647 |
| SatI | GCNGC | 2 cut(s) | 655, 711 |
| Sau3AI | GATC | 2 cut(s) | 130, 577 |
| Sau96I | GGNCC | 1 cut(s) | 271 |
| SchI | GAGTC | 1 cut(s) | 424 |
| SfaNI | GCATC | 1 cut(s) | 86 |
| SfcI | CTRYAG | 1 cut(s) | 546 |
| SinI | GGWCC | 1 cut(s) | 271 |
| SpeI | ACTAGT | 1 cut(s) | 142 |
| Sse9I | AATT | 7 cut(s) | 246, 455, 589, 691, 698, 715, 742 |
| SsiI | CCGC | 1 cut(s) | 711 |
| SspMI | CTAG | 3 cut(s) | 143, 203, 609 |
| StyI | CCWWGG | 1 cut(s) | 398 |
| TaaI | ACNGT | 1 cut(s) | 72 |
| TaiI | ACGT | 1 cut(s) | 36 |
| TasI | AATT | 7 cut(s) | 246, 455, 589, 691, 698, 715, 742 |
| TauI | GCSGC | 1 cut(s) | 713 |
| TfiI | GAWTC | 5 cut(s) | 15, 223, 322, 562, 785 |
| Tru1I | TTAA | 5 cut(s) | 74, 104, 212, 249, 647 |
| Tru9I | TTAA | 5 cut(s) | 74, 104, 212, 249, 647 |
| TscAI | CASTG | 2 cut(s) | 167, 273 |
| TseI | GCWGC | 1 cut(s) | 654 |
| TspDTI | ATGAA | 4 cut(s) | 11, 17, 503, 587 |
| TspRI | CASTG | 2 cut(s) | 167, 273 |
| VpaK11BI | GGWCC | 1 cut(s) | 271 |
| XapI | RAATTY | 3 cut(s) | 455, 691, 698 |
| XspI | CTAG | 3 cut(s) | 143, 203, 609 |