TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 387 |
| Acc65I | GGTACC | 1 cut(s) | 47 |
| AccB1I | GGYRCC | 1 cut(s) | 47 |
| AciI | CCGC | 4 cut(s) | 41, 59, 103, 382 |
| AcoI | YGGCCR | 1 cut(s) | 104 |
| AcsI | RAATTY | 2 cut(s) | 172, 479 |
| AcuI | CTGAAG | 2 cut(s) | 168, 177 |
| AfaI | GTAC | 4 cut(s) | 49, 258, 386, 399 |
| AgsI | TTSAA | 2 cut(s) | 37, 202 |
| AjiI | CACGTC | 1 cut(s) | 79 |
| AjnI | CCWGG | 2 cut(s) | 363, 416 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 464 |
| AluBI | AGCT | 1 cut(s) | 300 |
| AluI | AGCT | 1 cut(s) | 300 |
| Alw26I | GTCTC | 4 cut(s) | 14, 86, 146, 419 |
| AoxI | GGCC | 2 cut(s) | 104, 128 |
| ApoI | RAATTY | 2 cut(s) | 172, 479 |
| Asp718I | GGTACC | 1 cut(s) | 47 |
| AspS9I | GGNCC | 1 cut(s) | 458 |
| AvaII | GGWCC | 1 cut(s) | 458 |
| BanI | GGYRCC | 1 cut(s) | 47 |
| BccI | CCATC | 1 cut(s) | 56 |
| BceAI | ACGGC | 1 cut(s) | 72 |
| BciT130I | CCWGG | 2 cut(s) | 365, 418 |
| BcoDI | GTCTC | 4 cut(s) | 14, 86, 146, 419 |
| BfaI | CTAG | 2 cut(s) | 438, 462 |
| BfuAI | ACCTGC | 1 cut(s) | 387 |
| BglII | AGATCT | 1 cut(s) | 182 |
| BisI | GCNGC | 1 cut(s) | 104 |
| BlsI | GCNGC | 1 cut(s) | 105 |
| Bme1390I | CCNGG | 2 cut(s) | 365, 418 |
| Bme18I | GGWCC | 1 cut(s) | 458 |
| BmgBI | CACGTC | 1 cut(s) | 79 |
| BmgT120I | GGNCC | 1 cut(s) | 458 |
| BmiI | GGNNCC | 1 cut(s) | 49 |
| BmrFI | CCNGG | 2 cut(s) | 365, 418 |
| BmrI | ACTGGG | 1 cut(s) | 276 |
| BmuI | ACTGGG | 1 cut(s) | 276 |
| BpuEI | CTTGAG | 1 cut(s) | 233 |
| BsaI | GGTCTC | 1 cut(s) | 14 |
| BsaJI | CCNNGG | 2 cut(s) | 54, 417 |
| Bse1I | ACTGG | 1 cut(s) | 271 |
| BseBI | CCWGG | 2 cut(s) | 365, 418 |
| BseDI | CCNNGG | 2 cut(s) | 54, 417 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseNI | ACTGG | 1 cut(s) | 271 |
| BshFI | GGCC | 2 cut(s) | 106, 130 |
| BshNI | GGYRCC | 1 cut(s) | 47 |
| BsiSI | CCGG | 1 cut(s) | 131 |
| BsmAI | GTCTC | 4 cut(s) | 14, 86, 146, 419 |
| BsnI | GGCC | 2 cut(s) | 106, 130 |
| Bso31I | GGTCTC | 1 cut(s) | 14 |
| Bsp1407I | TGTACA | 1 cut(s) | 256 |
| Bsp143I | GATC | 1 cut(s) | 182 |
| BspACI | CCGC | 4 cut(s) | 41, 59, 103, 382 |
| BspANI | GGCC | 2 cut(s) | 106, 130 |
| BspLI | GGNNCC | 1 cut(s) | 49 |
| BspMI | ACCTGC | 1 cut(s) | 387 |
| BspT107I | GGYRCC | 1 cut(s) | 47 |
| BspTNI | GGTCTC | 1 cut(s) | 14 |
| BsrGI | TGTACA | 1 cut(s) | 256 |
| BsrI | ACTGG | 1 cut(s) | 271 |
| BssECI | CCNNGG | 2 cut(s) | 54, 417 |
| BssMI | GATC | 1 cut(s) | 182 |
| Bst2UI | CCWGG | 2 cut(s) | 365, 418 |
| Bst4CI | ACNGT | 1 cut(s) | 97 |
| Bst6I | CTCTTC | 2 cut(s) | 144, 417 |
| BstAUI | TGTACA | 1 cut(s) | 256 |
| BstC8I | GCNNGC | 2 cut(s) | 302, 311 |
| BstDSI | CCRYGG | 1 cut(s) | 54 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstKTI | GATC | 1 cut(s) | 185 |
| BstMAI | GTCTC | 4 cut(s) | 14, 86, 146, 419 |
| BstMBI | GATC | 1 cut(s) | 182 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 306, 310 |
| BstNI | CCWGG | 2 cut(s) | 365, 418 |
| BstNSI | RCATGY | 1 cut(s) | 363 |
| BstSCI | CCNGG | 2 cut(s) | 363, 416 |
| BstX2I | RGATCY | 1 cut(s) | 182 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 114 |
| BstYI | RGATCY | 1 cut(s) | 182 |
| BsuRI | GGCC | 2 cut(s) | 106, 130 |
| BtgI | CCRYGG | 1 cut(s) | 54 |
| BtrI | CACGTC | 1 cut(s) | 79 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| BtsIMutI | CAGTG | 2 cut(s) | 102, 264 |
| BveI | ACCTGC | 1 cut(s) | 387 |
| Cac8I | GCNNGC | 2 cut(s) | 302, 311 |
| Cfr13I | GGNCC | 1 cut(s) | 458 |
| Csp6I | GTAC | 4 cut(s) | 48, 257, 385, 398 |
| CviAII | CATG | 3 cut(s) | 193, 223, 360 |
| CviJI | RGCY | 5 cut(s) | 106, 130, 300, 304, 465 |
| CviKI_1 | RGCY | 5 cut(s) | 106, 130, 300, 304, 465 |
| CviQI | GTAC | 4 cut(s) | 48, 257, 385, 398 |
| DpnI | GATC | 1 cut(s) | 184 |
| DpnII | GATC | 1 cut(s) | 182 |
| EaeI | YGGCCR | 1 cut(s) | 104 |
| Eam1104I | CTCTTC | 2 cut(s) | 144, 417 |
| EarI | CTCTTC | 2 cut(s) | 144, 417 |
| EciI | GGCGGA | 1 cut(s) | 74 |
| Eco31I | GGTCTC | 1 cut(s) | 14 |
| Eco32I | GATATC | 1 cut(s) | 453 |
| Eco47I | GGWCC | 1 cut(s) | 458 |
| Eco57I | CTGAAG | 2 cut(s) | 168, 177 |
| EcoO109I | RGGNCCY | 1 cut(s) | 458 |
| EcoRI | GAATTC | 1 cut(s) | 479 |
| EcoRII | CCWGG | 2 cut(s) | 363, 416 |
| EcoRV | GATATC | 1 cut(s) | 453 |
| FaeI | CATG | 3 cut(s) | 196, 226, 363 |
| FaiI | YATR | 6 cut(s) | 194, 224, 255, 335, 361, 477 |
| FatI | CATG | 3 cut(s) | 192, 222, 359 |
| Fnu4HI | GCNGC | 1 cut(s) | 104 |
| FokI | GGATG | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 1 cut(s) | 104 |
| FspBI | CTAG | 2 cut(s) | 438, 462 |
| GluI | GCNGC | 1 cut(s) | 104 |
| HaeIII | GGCC | 2 cut(s) | 106, 130 |
| HapII | CCGG | 1 cut(s) | 131 |
| Hin1II | CATG | 3 cut(s) | 196, 226, 363 |
| HinfI | GANTC | 3 cut(s) | 37, 318, 413 |
| HpaII | CCGG | 1 cut(s) | 131 |
| Hpy166II | GTNNAC | 1 cut(s) | 117 |
| Hpy188I | TCNGA | 2 cut(s) | 187, 485 |
| Hpy188III | TCNNGA | 2 cut(s) | 34, 456 |
| Hpy8I | GTNNAC | 1 cut(s) | 117 |
| Hpy99I | CGWCG | 1 cut(s) | 127 |
| HpyAV | CCTTC | 1 cut(s) | 152 |
| HpyCH4III | ACNGT | 1 cut(s) | 97 |
| HpyCH4IV | ACGT | 1 cut(s) | 78 |
| HpyCH4V | TGCA | 1 cut(s) | 178 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 306, 310 |
| HpySE526I | ACGT | 1 cut(s) | 78 |
| Hsp92II | CATG | 3 cut(s) | 196, 226, 363 |
| KpnI | GGTACC | 1 cut(s) | 51 |
| Kzo9I | GATC | 1 cut(s) | 182 |
| LmnI | GCTCC | 1 cut(s) | 246 |
| MaeI | CTAG | 2 cut(s) | 438, 462 |
| MaeII | ACGT | 1 cut(s) | 78 |
| MalI | GATC | 1 cut(s) | 184 |
| MboI | GATC | 1 cut(s) | 182 |
| MboII | GAAGA | 4 cut(s) | 94, 161, 238, 434 |
| MflI | RGATCY | 1 cut(s) | 182 |
| MluCI | AATT | 3 cut(s) | 172, 236, 479 |
| MmeI | TCCRAC | 1 cut(s) | 268 |
| MnlI | CCTC | 4 cut(s) | 120, 308, 403, 436 |
| MseI | TTAA | 2 cut(s) | 296, 351 |
| MspI | CCGG | 1 cut(s) | 131 |
| MspR9I | CCNGG | 2 cut(s) | 365, 418 |
| MvaI | CCWGG | 2 cut(s) | 365, 418 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 306, 310 |
| NdeII | GATC | 1 cut(s) | 182 |
| NlaIII | CATG | 3 cut(s) | 196, 226, 363 |
| NlaIV | GGNNCC | 1 cut(s) | 49 |
| NspI | RCATGY | 1 cut(s) | 363 |
| PfeI | GAWTC | 3 cut(s) | 37, 318, 413 |
| PkrI | GCNGC | 1 cut(s) | 105 |
| PpuMI | RGGWCCY | 1 cut(s) | 458 |
| Psp5II | RGGWCCY | 1 cut(s) | 458 |
| Psp6I | CCWGG | 2 cut(s) | 363, 416 |
| PspGI | CCWGG | 2 cut(s) | 363, 416 |
| PspN4I | GGNNCC | 1 cut(s) | 49 |
| PspPI | GGNCC | 1 cut(s) | 458 |
| PspPPI | RGGWCCY | 1 cut(s) | 458 |
| PsuI | RGATCY | 1 cut(s) | 182 |
| RsaI | GTAC | 4 cut(s) | 49, 258, 386, 399 |
| RsaNI | GTAC | 4 cut(s) | 48, 257, 385, 398 |
| SaqAI | TTAA | 2 cut(s) | 296, 351 |
| SatI | GCNGC | 1 cut(s) | 104 |
| Sau3AI | GATC | 1 cut(s) | 182 |
| Sau96I | GGNCC | 1 cut(s) | 458 |
| ScrFI | CCNGG | 2 cut(s) | 365, 418 |
| SetI | ASST | 8 cut(s) | 32, 81, 284, 302, 333, 381, 439, 463 |
| SinI | GGWCC | 1 cut(s) | 458 |
| SmlI | CTYRAG | 1 cut(s) | 248 |
| SmoI | CTYRAG | 1 cut(s) | 248 |
| Sse9I | AATT | 3 cut(s) | 172, 236, 479 |
| SsiI | CCGC | 4 cut(s) | 41, 59, 103, 382 |
| SspI | AATATT | 1 cut(s) | 22 |
| SspMI | CTAG | 2 cut(s) | 438, 462 |
| StyD4I | CCNGG | 2 cut(s) | 363, 416 |
| TaaI | ACNGT | 1 cut(s) | 97 |
| TaiI | ACGT | 1 cut(s) | 81 |
| TasI | AATT | 3 cut(s) | 172, 236, 479 |
| TatI | WGTACW | 1 cut(s) | 256 |
| TauI | GCSGC | 1 cut(s) | 106 |
| TfiI | GAWTC | 3 cut(s) | 37, 318, 413 |
| Tru1I | TTAA | 2 cut(s) | 296, 351 |
| Tru9I | TTAA | 2 cut(s) | 296, 351 |
| TscAI | CASTG | 2 cut(s) | 102, 271 |
| TspDTI | ATGAA | 3 cut(s) | 125, 239, 369 |
| TspRI | CASTG | 2 cut(s) | 102, 271 |
| VpaK11BI | GGWCC | 1 cut(s) | 458 |
| XapI | RAATTY | 2 cut(s) | 172, 479 |
| XceI | RCATGY | 1 cut(s) | 363 |
| XspI | CTAG | 2 cut(s) | 438, 462 |