TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 711 |
| AbsI | CCTCGAGG | 1 cut(s) | 278 |
| AccB1I | GGYRCC | 2 cut(s) | 273, 1428 |
| AccI | GTMKAC | 1 cut(s) | 909 |
| AciI | CCGC | 2 cut(s) | 852, 1312 |
| AclWI | GGATC | 2 cut(s) | 347, 1189 |
| AcsI | RAATTY | 6 cut(s) | 200, 460, 660, 716, 1010, 1257 |
| AcuI | CTGAAG | 3 cut(s) | 64, 471, 1575 |
| AcyI | GRCGYC | 1 cut(s) | 1549 |
| AfaI | GTAC | 1 cut(s) | 888 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 861 |
| AflII | CTTAAG | 1 cut(s) | 880 |
| AflIII | ACRYGT | 2 cut(s) | 95, 997 |
| AgeI | ACCGGT | 1 cut(s) | 1425 |
| AgsI | TTSAA | 6 cut(s) | 734, 752, 995, 1172, 1195, 1237 |
| Alw21I | GWGCWC | 1 cut(s) | 1071 |
| Alw26I | GTCTC | 1 cut(s) | 244 |
| AlwI | GGATC | 2 cut(s) | 347, 1189 |
| Ama87I | CYCGRG | 4 cut(s) | 247, 278, 597, 961 |
| AoxI | GGCC | 4 cut(s) | 112, 138, 702, 958 |
| ApeKI | GCWGC | 2 cut(s) | 842, 922 |
| ApoI | RAATTY | 6 cut(s) | 200, 460, 660, 716, 1010, 1257 |
| AsiGI | ACCGGT | 1 cut(s) | 1425 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 870 |
| AspS9I | GGNCC | 6 cut(s) | 112, 138, 849, 959, 1048, 1414 |
| AsuC2I | CCSGG | 3 cut(s) | 962, 963, 1527 |
| AsuII | TTCGAA | 1 cut(s) | 458 |
| AvaI | CYCGRG | 4 cut(s) | 247, 278, 597, 961 |
| AvaII | GGWCC | 3 cut(s) | 849, 1048, 1414 |
| BanI | GGYRCC | 2 cut(s) | 273, 1428 |
| BanII | GRGCYC | 1 cut(s) | 1071 |
| BauI | CACGAG | 1 cut(s) | 1248 |
| BbsI | GAAGAC | 2 cut(s) | 96, 235 |
| Bbv12I | GWGCWC | 1 cut(s) | 1071 |
| BbvI | GCAGC | 2 cut(s) | 829, 934 |
| BccI | CCATC | 2 cut(s) | 1280, 1373 |
| BceAI | ACGGC | 1 cut(s) | 1144 |
| BcnI | CCSGG | 3 cut(s) | 962, 963, 1527 |
| BcoDI | GTCTC | 1 cut(s) | 244 |
| BfaI | CTAG | 4 cut(s) | 540, 590, 987, 1107 |
| BfmI | CTRYAG | 1 cut(s) | 843 |
| BfrI | CTTAAG | 1 cut(s) | 880 |
| BglII | AGATCT | 1 cut(s) | 228 |
| BisI | GCNGC | 2 cut(s) | 843, 923 |
| BlsI | GCNGC | 2 cut(s) | 844, 924 |
| Bme1390I | CCNGG | 3 cut(s) | 962, 963, 1527 |
| Bme18I | GGWCC | 3 cut(s) | 849, 1048, 1414 |
| BmeT110I | CYCGRG | 4 cut(s) | 247, 278, 597, 961 |
| BmgT120I | GGNCC | 6 cut(s) | 112, 138, 849, 959, 1048, 1414 |
| BmiI | GGNNCC | 3 cut(s) | 275, 850, 1430 |
| BmrFI | CCNGG | 3 cut(s) | 962, 963, 1527 |
| BmsI | GCATC | 2 cut(s) | 636, 1455 |
| BpiI | GAAGAC | 2 cut(s) | 96, 235 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 427, 459 |
| BpmI | CTGGAG | 1 cut(s) | 250 |
| Bpu10I | CCTNAGC | 1 cut(s) | 699 |
| Bpu14I | TTCGAA | 1 cut(s) | 458 |
| BpuEI | CTTGAG | 1 cut(s) | 1085 |
| BpuMI | CCSGG | 3 cut(s) | 962, 963, 1527 |
| BsaAI | YACGTR | 2 cut(s) | 98, 929 |
| BsaBI | GATNNNNATC | 1 cut(s) | 233 |
| BsaHI | GRCGYC | 1 cut(s) | 1549 |
| BsaJI | CCNNGG | 5 cut(s) | 217, 855, 961, 962, 1525 |
| BsaWI | WCCGGW | 1 cut(s) | 1425 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1053, 1083 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 861 |
| Bse118I | RCCGGY | 1 cut(s) | 1425 |
| Bse8I | GATNNNNATC | 1 cut(s) | 233 |
| BseDI | CCNNGG | 5 cut(s) | 217, 855, 961, 962, 1525 |
| BseGI | GGATG | 2 cut(s) | 1234, 1384 |
| BseJI | GATNNNNATC | 1 cut(s) | 233 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 861 |
| BseMII | CTCAG | 2 cut(s) | 493, 519 |
| BseRI | GAGGAG | 1 cut(s) | 296 |
| BseXI | GCAGC | 2 cut(s) | 829, 934 |
| BseYI | CCCAGC | 1 cut(s) | 316 |
| BshFI | GGCC | 4 cut(s) | 114, 140, 704, 960 |
| BshNI | GGYRCC | 2 cut(s) | 273, 1428 |
| BshTI | ACCGGT | 1 cut(s) | 1425 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1071 |
| BsiHKCI | CYCGRG | 4 cut(s) | 247, 278, 597, 961 |
| BsiSI | CCGG | 4 cut(s) | 141, 962, 1426, 1527 |
| BslFI | GGGAC | 3 cut(s) | 22, 862, 1496 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 861 |
| BsmAI | GTCTC | 1 cut(s) | 244 |
| BsmFI | GGGAC | 3 cut(s) | 22, 862, 1496 |
| BsnI | GGCC | 4 cut(s) | 114, 140, 704, 960 |
| BsoBI | CYCGRG | 4 cut(s) | 247, 278, 597, 961 |
| Bsp119I | TTCGAA | 1 cut(s) | 458 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1071 |
| Bsp143I | GATC | 4 cut(s) | 228, 294, 352, 1181 |
| BspACI | CCGC | 2 cut(s) | 852, 1312 |
| BspANI | GGCC | 4 cut(s) | 114, 140, 704, 960 |
| BspCNI | CTCAG | 2 cut(s) | 492, 520 |
| BspLI | GGNNCC | 3 cut(s) | 275, 850, 1430 |
| BspMAI | CTGCAG | 1 cut(s) | 847 |
| BspPI | GGATC | 2 cut(s) | 347, 1189 |
| BspT104I | TTCGAA | 1 cut(s) | 458 |
| BspT107I | GGYRCC | 2 cut(s) | 273, 1428 |
| BspTI | CTTAAG | 1 cut(s) | 880 |
| BsrFI | RCCGGY | 1 cut(s) | 1425 |
| BssAI | RCCGGY | 1 cut(s) | 1425 |
| BssECI | CCNNGG | 5 cut(s) | 217, 855, 961, 962, 1525 |
| BssMI | GATC | 4 cut(s) | 228, 294, 352, 1181 |
| BssNI | GRCGYC | 1 cut(s) | 1549 |
| BssSI | CACGAG | 1 cut(s) | 1248 |
| BssT1I | CCWWGG | 2 cut(s) | 217, 855 |
| Bst2BI | CACGAG | 1 cut(s) | 1248 |
| Bst4CI | ACNGT | 3 cut(s) | 255, 383, 1148 |
| BstACI | GRCGYC | 1 cut(s) | 1549 |
| BstAFI | CTTAAG | 1 cut(s) | 880 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1474 |
| BstBAI | YACGTR | 2 cut(s) | 98, 929 |
| BstBI | TTCGAA | 1 cut(s) | 458 |
| BstC8I | GCNNGC | 3 cut(s) | 210, 1083, 1125 |
| BstDEI | CTNAG | 6 cut(s) | 225, 479, 528, 562, 699, 1073 |
| BstF5I | GGATG | 2 cut(s) | 1234, 1384 |
| BstKTI | GATC | 4 cut(s) | 231, 297, 355, 1184 |
| BstMAI | GTCTC | 1 cut(s) | 244 |
| BstMBI | GATC | 4 cut(s) | 228, 294, 352, 1181 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 84, 851, 966, 1474 |
| BstNSI | RCATGY | 2 cut(s) | 365, 1085 |
| BstSCI | CCNGG | 3 cut(s) | 960, 961, 1525 |
| BstSFI | CTRYAG | 1 cut(s) | 843 |
| BstV1I | GCAGC | 2 cut(s) | 829, 934 |
| BstV2I | GAAGAC | 2 cut(s) | 96, 235 |
| BstX2I | RGATCY | 2 cut(s) | 228, 1181 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 956 |
| BstYI | RGATCY | 2 cut(s) | 228, 1181 |
| BsuRI | GGCC | 4 cut(s) | 114, 140, 704, 960 |
| BtsCI | GGATG | 2 cut(s) | 1234, 1384 |
| BtsI | GCAGTG | 1 cut(s) | 841 |
| BtsIMutI | CAGTG | 1 cut(s) | 841 |
| Cac8I | GCNNGC | 3 cut(s) | 210, 1083, 1125 |
| Cfr10I | RCCGGY | 1 cut(s) | 1425 |
| Cfr13I | GGNCC | 6 cut(s) | 112, 138, 849, 959, 1048, 1414 |
| Cfr9I | CCCGGG | 1 cut(s) | 961 |
| CseI | GACGC | 2 cut(s) | 885, 1538 |
| Csp6I | GTAC | 1 cut(s) | 887 |
| CspAI | ACCGGT | 1 cut(s) | 1425 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1129, 1164 |
| CviAII | CATG | 8 cut(s) | 298, 362, 500, 652, 670, 1082, 1469, 1486 |
| CviQI | GTAC | 1 cut(s) | 887 |
| DdeI | CTNAG | 6 cut(s) | 225, 479, 528, 562, 699, 1073 |
| DpnI | GATC | 4 cut(s) | 230, 296, 354, 1183 |
| DpnII | GATC | 4 cut(s) | 228, 294, 352, 1181 |
| DraI | TTTAAA | 1 cut(s) | 192 |
| EciI | GGCGGA | 1 cut(s) | 1327 |
| Ecl136II | GAGCTC | 1 cut(s) | 1069 |
| Eco130I | CCWWGG | 2 cut(s) | 217, 855 |
| Eco24I | GRGCYC | 1 cut(s) | 1071 |
| Eco32I | GATATC | 3 cut(s) | 7, 610, 805 |
| Eco47I | GGWCC | 3 cut(s) | 849, 1048, 1414 |
| Eco53kI | GAGCTC | 1 cut(s) | 1069 |
| Eco57I | CTGAAG | 3 cut(s) | 64, 471, 1575 |
| Eco88I | CYCGRG | 4 cut(s) | 247, 278, 597, 961 |
| EcoICRI | GAGCTC | 1 cut(s) | 1069 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1414 |
| EcoRV | GATATC | 3 cut(s) | 7, 610, 805 |
| EcoT14I | CCWWGG | 2 cut(s) | 217, 855 |
| EcoT22I | ATGCAT | 2 cut(s) | 629, 1470 |
| EcoT38I | GRGCYC | 1 cut(s) | 1071 |
| ErhI | CCWWGG | 2 cut(s) | 217, 855 |
| FaeI | CATG | 8 cut(s) | 301, 365, 503, 655, 673, 1085, 1472, 1489 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 42, 74, 1047, 1079 |
| FaqI | GGGAC | 3 cut(s) | 22, 862, 1496 |
| FatI | CATG | 8 cut(s) | 297, 361, 499, 651, 669, 1081, 1468, 1485 |
| FblI | GTMKAC | 1 cut(s) | 909 |
| Fnu4HI | GCNGC | 2 cut(s) | 843, 923 |
| FokI | GGATG | 2 cut(s) | 1241, 1391 |
| FriOI | GRGCYC | 1 cut(s) | 1071 |
| Fsp4HI | GCNGC | 2 cut(s) | 843, 923 |
| FspBI | CTAG | 4 cut(s) | 540, 590, 987, 1107 |
| GluI | GCNGC | 2 cut(s) | 843, 923 |
| GsaI | CCCAGC | 1 cut(s) | 320 |
| GsuI | CTGGAG | 1 cut(s) | 250 |
| HaeIII | GGCC | 4 cut(s) | 114, 140, 704, 960 |
| HapII | CCGG | 4 cut(s) | 141, 962, 1426, 1527 |
| HgaI | GACGC | 2 cut(s) | 885, 1538 |
| Hin1I | GRCGYC | 1 cut(s) | 1549 |
| Hin1II | CATG | 8 cut(s) | 301, 365, 503, 655, 673, 1085, 1472, 1489 |
| HindIII | AAGCTT | 2 cut(s) | 76, 453 |
| HinfI | GANTC | 7 cut(s) | 144, 475, 593, 635, 972, 1243, 1407 |
| HpaII | CCGG | 4 cut(s) | 141, 962, 1426, 1527 |
| Hpy166II | GTNNAC | 1 cut(s) | 910 |
| Hpy188I | TCNGA | 8 cut(s) | 83, 482, 587, 632, 640, 802, 1091, 1346 |
| Hpy8I | GTNNAC | 1 cut(s) | 910 |
| Hpy99I | CGWCG | 2 cut(s) | 167, 879 |
| HpyAV | CCTTC | 4 cut(s) | 51, 366, 415, 728 |
| HpyCH4III | ACNGT | 3 cut(s) | 255, 383, 1148 |
| HpyCH4IV | ACGT | 4 cut(s) | 97, 567, 928, 997 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 84, 851, 966, 1474 |
| HpyF3I | CTNAG | 6 cut(s) | 225, 479, 528, 562, 699, 1073 |
| HpySE526I | ACGT | 4 cut(s) | 97, 567, 928, 997 |
| Hsp92I | GRCGYC | 1 cut(s) | 1549 |
| Hsp92II | CATG | 8 cut(s) | 301, 365, 503, 655, 673, 1085, 1472, 1489 |
| Kzo9I | GATC | 4 cut(s) | 228, 294, 352, 1181 |
| LmnI | GCTCC | 3 cut(s) | 283, 966, 1074 |
| Lsp1109I | GCAGC | 2 cut(s) | 829, 934 |
| LweI | GCATC | 2 cut(s) | 636, 1455 |
| MaeI | CTAG | 4 cut(s) | 540, 590, 987, 1107 |
| MaeII | ACGT | 4 cut(s) | 97, 567, 928, 997 |
| MaeIII | GTNAC | 2 cut(s) | 535, 1435 |
| MalI | GATC | 4 cut(s) | 230, 296, 354, 1183 |
| MboI | GATC | 4 cut(s) | 228, 294, 352, 1181 |
| MboII | GAAGA | 7 cut(s) | 101, 179, 197, 235, 321, 1067, 1568 |
| MfeI | CAATTG | 1 cut(s) | 1017 |
| MflI | RGATCY | 2 cut(s) | 228, 1181 |
| MhlI | GDGCHC | 1 cut(s) | 1071 |
| MmeI | TCCRAC | 1 cut(s) | 565 |
| Mph1103I | ATGCAT | 2 cut(s) | 629, 1470 |
| MroXI | GAANNNNTTC | 1 cut(s) | 870 |
| MseI | TTAA | 3 cut(s) | 191, 291, 881 |
| MslI | CAYNNNNRTG | 2 cut(s) | 120, 411 |
| MspA1I | CMGCKG | 1 cut(s) | 270 |
| MspCI | CTTAAG | 1 cut(s) | 880 |
| MspI | CCGG | 4 cut(s) | 141, 962, 1426, 1527 |
| MspR9I | CCNGG | 3 cut(s) | 962, 963, 1527 |
| MunI | CAATTG | 1 cut(s) | 1017 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 84, 851, 966, 1474 |
| NciI | CCSGG | 3 cut(s) | 962, 963, 1527 |
| NdeII | GATC | 4 cut(s) | 228, 294, 352, 1181 |
| NlaIII | CATG | 8 cut(s) | 301, 365, 503, 655, 673, 1085, 1472, 1489 |
| NlaIV | GGNNCC | 3 cut(s) | 275, 850, 1430 |
| NmuCI | GTSAC | 1 cut(s) | 535 |
| NsiI | ATGCAT | 2 cut(s) | 629, 1470 |
| NspI | RCATGY | 2 cut(s) | 365, 1085 |
| NspV | TTCGAA | 1 cut(s) | 458 |
| PaeI | GCATGC | 1 cut(s) | 1085 |
| PaeR7I | CTCGAG | 3 cut(s) | 247, 278, 597 |
| PdmI | GAANNNNTTC | 1 cut(s) | 870 |
| PfeI | GAWTC | 7 cut(s) | 144, 475, 593, 635, 972, 1243, 1407 |
| PinAI | ACCGGT | 1 cut(s) | 1425 |
| PkrI | GCNGC | 2 cut(s) | 844, 924 |
| Ppu21I | YACGTR | 2 cut(s) | 98, 929 |
| PpuMI | RGGWCCY | 1 cut(s) | 1414 |
| PsiI | TTATAA | 1 cut(s) | 711 |
| Psp124BI | GAGCTC | 1 cut(s) | 1071 |
| Psp5II | RGGWCCY | 1 cut(s) | 1414 |
| PspFI | CCCAGC | 1 cut(s) | 316 |
| PspN4I | GGNNCC | 3 cut(s) | 275, 850, 1430 |
| PspPI | GGNCC | 6 cut(s) | 112, 138, 849, 959, 1048, 1414 |
| PspPPI | RGGWCCY | 1 cut(s) | 1414 |
| PspXI | VCTCGAGB | 1 cut(s) | 278 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 430, 462 |
| PstI | CTGCAG | 1 cut(s) | 847 |
| PsuI | RGATCY | 2 cut(s) | 228, 1181 |
| PvuII | CAGCTG | 1 cut(s) | 270 |
| RsaI | GTAC | 1 cut(s) | 888 |
| RsaNI | GTAC | 1 cut(s) | 887 |
| RseI | CAYNNNNRTG | 2 cut(s) | 120, 411 |
| SacI | GAGCTC | 1 cut(s) | 1071 |
| SaqAI | TTAA | 3 cut(s) | 191, 291, 881 |
| SatI | GCNGC | 2 cut(s) | 843, 923 |
| Sau3AI | GATC | 4 cut(s) | 228, 294, 352, 1181 |
| Sau96I | GGNCC | 6 cut(s) | 112, 138, 849, 959, 1048, 1414 |
| ScrFI | CCNGG | 3 cut(s) | 962, 963, 1527 |
| SduI | GDGCHC | 1 cut(s) | 1071 |
| SfaNI | GCATC | 2 cut(s) | 636, 1455 |
| SfcI | CTRYAG | 1 cut(s) | 843 |
| Sfr274I | CTCGAG | 3 cut(s) | 247, 278, 597 |
| SfuI | TTCGAA | 1 cut(s) | 458 |
| SinI | GGWCC | 3 cut(s) | 849, 1048, 1414 |
| SlaI | CTCGAG | 3 cut(s) | 247, 278, 597 |
| SmaI | CCCGGG | 1 cut(s) | 963 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 120, 411 |
| SmlI | CTYRAG | 5 cut(s) | 247, 278, 597, 880, 1064 |
| SmoI | CTYRAG | 5 cut(s) | 247, 278, 597, 880, 1064 |
| SphI | GCATGC | 1 cut(s) | 1085 |
| SsiI | CCGC | 2 cut(s) | 852, 1312 |
| SspMI | CTAG | 4 cut(s) | 540, 590, 987, 1107 |
| SstI | GAGCTC | 1 cut(s) | 1071 |
| StyD4I | CCNGG | 3 cut(s) | 960, 961, 1525 |
| StyI | CCWWGG | 2 cut(s) | 217, 855 |
| TaaI | ACNGT | 3 cut(s) | 255, 383, 1148 |
| TaiI | ACGT | 4 cut(s) | 100, 570, 931, 1000 |
| TaqI | TCGA | 8 cut(s) | 248, 279, 402, 458, 598, 874, 1323, 1410 |
| TaqII | GACCGA | 1 cut(s) | 1065 |
| TfiI | GAWTC | 7 cut(s) | 144, 475, 593, 635, 972, 1243, 1407 |
| Tru1I | TTAA | 3 cut(s) | 191, 291, 881 |
| Tru9I | TTAA | 3 cut(s) | 191, 291, 881 |
| TscAI | CASTG | 1 cut(s) | 841 |
| TseFI | GTSAC | 1 cut(s) | 535 |
| TseI | GCWGC | 2 cut(s) | 842, 922 |
| Tsp45I | GTSAC | 1 cut(s) | 535 |
| TspDTI | ATGAA | 7 cut(s) | 61, 138, 360, 429, 516, 1224, 1245 |
| TspMI | CCCGGG | 1 cut(s) | 961 |
| TspRI | CASTG | 1 cut(s) | 841 |
| Vha464I | CTTAAG | 1 cut(s) | 880 |
| VpaK11BI | GGWCC | 3 cut(s) | 849, 1048, 1414 |
| XapI | RAATTY | 6 cut(s) | 200, 460, 660, 716, 1010, 1257 |
| XceI | RCATGY | 2 cut(s) | 365, 1085 |
| XhoI | CTCGAG | 3 cut(s) | 247, 278, 597 |
| XmaI | CCCGGG | 1 cut(s) | 961 |
| XmiI | GTMKAC | 1 cut(s) | 909 |
| XmnI | GAANNNNTTC | 1 cut(s) | 870 |
| XspI | CTAG | 4 cut(s) | 540, 590, 987, 1107 |
| Zsp2I | ATGCAT | 2 cut(s) | 629, 1470 |