FvH4_5g34250

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
24917150 .. 24918979
1830 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g34250.t1

Sequence Viewer

Length: 1323 bp
ATGAATGAAGAAGAAGGTCTTGAGCTCTTCAGTTGGCATGCCTTTCAAAATCATTCTCCTGATGAAGACTATATTGAACTCTCAAGAAGGGTGGTTACGTACTGTGGAGGTTTACCACTGGCTCTTGAAGTTTTAGGGTCTTTTCTGTTTAAAAAGAGTGCAAGAGAATGGGAAAGCACACTGAAGAAATTGGAAAAAGTTCCTGATGTCAGAATTCATTCAAAGCTCAGAATAAGCTTTGATGCAATTGATGAGAGCCAGAAGAACATATTCCTCCATATATGTTGTTTTTTCATTGGAATGAACAAGGAATATGTCATACAAATACTGATGGGATGTGGTTTTTCTCCAGAAATAGAAATCAGTGTCCTGCAGAAACGTTGTCTTGTAACTGTCAGTGAGAAAAACAAGCTCATGATGCATGATTTATTGCGAGACATGGGCAGAGAAGTTGTTCGTGAAGAATCCCCTAAACGCCCTGAAAGATGTAGTAGATTGTATCGTCAGGAAGATGTAATAGATGTATTGACAGGTAAATCTGGAACTGAAGAGACTGAAGGACTTGCTTTAAACTTGCAAAGATCTGACAACATGAGCTTCAGCACAGAAGCATTTAGAAACATGAAGAGACTCAAATTGCTCCAACTCAACTATGTACAACTCACTGGACACTGCGACCAGTTTCCCAGCAAGTTAAGTTGGCTCTGCTTGCGAGGATACTCTCCAGAGGTTATACGAAATGAGTTTCTCAGTGAAACATGCCTGATCTCTCTCGATCTGCGGTGCAGCAATCTCGTACGATTTTGGGAGGATTCTAAGCGGCTTGAGAGATTGGAGGTGCTTAATCTTAGTCATTCACATTACCTAACACAATCACTGGACTTTTCACAACTCCCAAATCTAAAGTATTTGATCCTTAAACACTGTGTGAGCTTGCCAGAGATTGACCAGTCCATCGGACTTCTTTCTCACCTTGTCTTGCTAAATCTTAAAGGCTGCACTATGCTCAAGTACCTTCCAGAGGAATTTTACGAGTTGCGTTCTCTTAGGACTCTTGTTCTTTCTGGCTGTTCGAGATTTGATTATTTGAGCGAGGATATACATAATATGGTTTCTTTGAAAACTCTTGCTATAAGTGGCACAGCCATAAGTGATGTACCATCCTGTATAGATAACTTGTGGAACCTGGACTTTCAATCTCGACAAGGCCTGAGTGGACTAAAACGACGTTTACTGGAATCTTCTCAAGAACTTTTTCTCCGGCAGCAGCGTAAACTAGGGAAATTTGAAGGCAAGAATAAGCGGAATAGTGAAATCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

441

Amino Acids

51.01

Weight (kDa)

6.84

Isoelectric Point (pI)

66.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_ROQ1 PF23282 85 - 156 5.7e-19 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 273 - 396 9.1e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 781, 820, 1303
AclI AACGTT 1 cut(s) 379
AclWI GGATC 1 cut(s) 907
AcsI RAATTY 3 cut(s) 213, 1025, 1283
AcuI CTGAAG 5 cut(s) 13, 203, 567, 576, 583
AdeI CACNNNGTG 1 cut(s) 928
AfaI GTAC 5 cut(s) 101, 657, 798, 1013, 1158
AfiI CCNNNNNNNGG 1 cut(s) 1021
AgsI TTSAA 7 cut(s) 47, 77, 128, 222, 1120, 1196, 1289
AjnI CCWGG 1 cut(s) 1185
AloI GAACNNNNNNTCC 2 cut(s) 1242, 1274
AluBI AGCT 6 cut(s) 25, 226, 237, 412, 597, 933
AluI AGCT 6 cut(s) 25, 226, 237, 412, 597, 933
Alw21I GWGCWC 1 cut(s) 27
Alw26I GTCTC 3 cut(s) 429, 545, 622
AlwI GGATC 1 cut(s) 907
AoxI GGCC 1 cut(s) 1207
ApeKI GCWGC 4 cut(s) 786, 996, 1264, 1267
ApoI RAATTY 3 cut(s) 213, 1025, 1283
Asp700I GAANNNNTTC 5 cut(s) 198, 217, 269, 453, 1254
AsuHPI GGTGA 1 cut(s) 962
BanII GRGCYC 1 cut(s) 27
BarI GAAGNNNNNNTAC 2 cut(s) 79, 111
BbsI GAAGAC 1 cut(s) 72
Bbv12I GWGCWC 1 cut(s) 27
BbvI GCAGC 4 cut(s) 798, 983, 1276, 1279
BccI CCATC 3 cut(s) 325, 962, 1168
BcgI CGANNNNNNTGC 2 cut(s) 775, 809
BciT130I CCWGG 1 cut(s) 1187
BciVI GTATCC 1 cut(s) 710
BcoDI GTCTC 3 cut(s) 429, 545, 622
BfaI CTAG 1 cut(s) 1277
BfmI CTRYAG 1 cut(s) 371
BfuI GTATCC 1 cut(s) 710
BglII AGATCT 1 cut(s) 581
BisI GCNGC 5 cut(s) 787, 821, 997, 1265, 1268
BlsI GCNGC 5 cut(s) 788, 822, 998, 1266, 1269
Bme1390I CCNGG 1 cut(s) 1187
BmiI GGNNCC 1 cut(s) 1184
BmrFI CCNGG 1 cut(s) 1187
BmsI GCATC 2 cut(s) 232, 408
BpiI GAAGAC 1 cut(s) 72
BpmI CTGGAG 2 cut(s) 333, 708
BpuEI CTTGAG 5 cut(s) 41, 67, 845, 992, 1230
BsaAI YACGTR 1 cut(s) 99
BsaXI ACNNNNNCTCC 2 cut(s) 1242, 1272
Bsc4I CCNNNNNNNGG 1 cut(s) 1021
Bse1I ACTGG 6 cut(s) 123, 670, 679, 882, 949, 1239
BseBI CCWGG 1 cut(s) 1187
BseGI GGATG 2 cut(s) 341, 1160
BseLI CCNNNNNNNGG 1 cut(s) 1021
BseMII CTCAG 3 cut(s) 241, 763, 1202
BseNI ACTGG 6 cut(s) 123, 670, 679, 882, 949, 1239
BseXI GCAGC 4 cut(s) 798, 983, 1276, 1279
BseYI CCCAGC 1 cut(s) 686
BsgI GTGCAG 2 cut(s) 805, 982
BshFI GGCC 1 cut(s) 1209
BsiHKAI GWGCWC 1 cut(s) 27
BsiSI CCGG 1 cut(s) 1261
BsiWI CGTACG 1 cut(s) 796
BslI CCNNNNNNNGG 1 cut(s) 1021
BsmAI GTCTC 3 cut(s) 429, 545, 622
BsnI GGCC 1 cut(s) 1209
Bsp1286I GDGCHC 1 cut(s) 27
Bsp1407I TGTACA 1 cut(s) 655
Bsp143I GATC 4 cut(s) 581, 765, 775, 912
BspACI CCGC 3 cut(s) 781, 820, 1303
BspANI GGCC 1 cut(s) 1209
BspCNI CTCAG 3 cut(s) 240, 762, 1203
BspHI TCATGA 1 cut(s) 414
BspLI GGNNCC 1 cut(s) 1184
BspMAI CTGCAG 1 cut(s) 375
BspPI GGATC 1 cut(s) 907
BspQI GCTCTTC 1 cut(s) 32
BsrGI TGTACA 1 cut(s) 655
BsrI ACTGG 6 cut(s) 123, 670, 679, 882, 949, 1239
BssMI GATC 4 cut(s) 581, 765, 775, 912
Bst2UI CCWGG 1 cut(s) 1187
Bst4CI ACNGT 3 cut(s) 104, 394, 926
Bst6I CTCTTC 3 cut(s) 32, 543, 620
BstAUI TGTACA 1 cut(s) 655
BstBAI YACGTR 1 cut(s) 99
BstC8I GCNNGC 3 cut(s) 39, 710, 935
BstDEI CTNAG 6 cut(s) 227, 749, 816, 848, 1046, 1211
BstENI CCTNNNNNAGG 1 cut(s) 1019
BstF5I GGATG 2 cut(s) 341, 1160
BstKTI GATC 4 cut(s) 584, 768, 778, 915
BstMAI GTCTC 3 cut(s) 429, 545, 622
BstMBI GATC 4 cut(s) 581, 765, 775, 912
BstMWI GCNNNNNNNGC 2 cut(s) 418, 709
BstNI CCWGG 1 cut(s) 1187
BstNSI RCATGY 2 cut(s) 41, 762
BstSCI CCNGG 1 cut(s) 1185
BstSFI CTRYAG 1 cut(s) 371
BstSNI TACGTA 1 cut(s) 99
BstV1I GCAGC 4 cut(s) 798, 983, 1276, 1279
BstV2I GAAGAC 1 cut(s) 72
BstX2I RGATCY 1 cut(s) 581
BstYI RGATCY 1 cut(s) 581
BsuI GTATCC 1 cut(s) 710
BsuRI GGCC 1 cut(s) 1209
BtsCI GGATG 2 cut(s) 341, 1160
BtsI GCAGTG 1 cut(s) 670
BtsIMutI CAGTG 9 cut(s) 116, 179, 370, 403, 663, 670, 757, 875, 922
Cac8I GCNNGC 3 cut(s) 39, 710, 935
CciI TCATGA 1 cut(s) 414
Csp6I GTAC 5 cut(s) 100, 656, 797, 1012, 1157
CspCI CAANNNNNGTGG 2 cut(s) 72, 107
CviAII CATG 7 cut(s) 38, 415, 422, 439, 592, 622, 759
CviQI GTAC 5 cut(s) 100, 656, 797, 1012, 1157
DdeI CTNAG 6 cut(s) 227, 749, 816, 848, 1046, 1211
DpnI GATC 4 cut(s) 583, 767, 777, 914
DpnII GATC 4 cut(s) 581, 765, 775, 912
DraI TTTAAA 2 cut(s) 151, 570
DraIII CACNNNGTG 1 cut(s) 928
Eam1104I CTCTTC 3 cut(s) 32, 543, 620
EarI CTCTTC 3 cut(s) 32, 543, 620
Ecl136II GAGCTC 1 cut(s) 25
Eco105I TACGTA 1 cut(s) 99
Eco147I AGGCCT 1 cut(s) 1209
Eco24I GRGCYC 1 cut(s) 27
Eco53kI GAGCTC 1 cut(s) 25
Eco57I CTGAAG 5 cut(s) 13, 203, 567, 576, 583
EcoICRI GAGCTC 1 cut(s) 25
EcoNI CCTNNNNNAGG 1 cut(s) 1019
EcoRI GAATTC 1 cut(s) 213
EcoRII CCWGG 1 cut(s) 1185
EcoT22I ATGCAT 1 cut(s) 423
EcoT38I GRGCYC 1 cut(s) 27
FaeI CATG 7 cut(s) 41, 418, 425, 442, 595, 625, 762
FalI AAGNNNNNCTT 1 cut(s) 35
FatI CATG 7 cut(s) 37, 414, 421, 438, 591, 621, 758
Fnu4HI GCNGC 5 cut(s) 787, 821, 997, 1265, 1268
FokI GGATG 2 cut(s) 348, 1147
FriOI GRGCYC 1 cut(s) 27
Fsp4HI GCNGC 5 cut(s) 787, 821, 997, 1265, 1268
FspBI CTAG 1 cut(s) 1277
GluI GCNGC 5 cut(s) 787, 821, 997, 1265, 1268
GsaI CCCAGC 1 cut(s) 690
GsuI CTGGAG 2 cut(s) 333, 708
HaeIII GGCC 1 cut(s) 1209
HapII CCGG 1 cut(s) 1261
Hin1II CATG 7 cut(s) 41, 418, 425, 442, 595, 625, 762
HindIII AAGCTT 1 cut(s) 235
HinfI GANTC 5 cut(s) 464, 630, 812, 1051, 1238
HpaII CCGG 1 cut(s) 1261
HphI GGTGA 1 cut(s) 962
Hpy166II GTNNAC 4 cut(s) 113, 1217, 1232, 1274
Hpy188I TCNGA 4 cut(s) 212, 230, 586, 959
Hpy8I GTNNAC 4 cut(s) 113, 1217, 1232, 1274
Hpy99I CGWCG 1 cut(s) 1230
HpyAV CCTTC 5 cut(s) 8, 81, 551, 1025, 1283
HpyCH4III ACNGT 3 cut(s) 104, 394, 926
HpyCH4IV ACGT 3 cut(s) 98, 379, 1228
HpyCH4V TGCA 7 cut(s) 161, 245, 373, 421, 577, 786, 999
HpyF10VI GCNNNNNNNGC 2 cut(s) 418, 709
HpyF3I CTNAG 6 cut(s) 227, 749, 816, 848, 1046, 1211
HpySE526I ACGT 3 cut(s) 98, 379, 1228
Hsp92II CATG 7 cut(s) 41, 418, 425, 442, 595, 625, 762
Kzo9I GATC 4 cut(s) 581, 765, 775, 912
LguI GCTCTTC 1 cut(s) 32
LmnI GCTCC 1 cut(s) 645
Lsp1109I GCAGC 4 cut(s) 798, 983, 1276, 1279
LweI GCATC 2 cut(s) 232, 408
MaeI CTAG 1 cut(s) 1277
MaeII ACGT 3 cut(s) 98, 379, 1228
MaeIII GTNAC 2 cut(s) 94, 388
MalI GATC 4 cut(s) 583, 767, 777, 914
MboI GATC 4 cut(s) 581, 765, 775, 912
MfeI CAATTG 1 cut(s) 246
MflI RGATCY 1 cut(s) 581
MhlI GDGCHC 1 cut(s) 27
MluCI AATT 6 cut(s) 188, 213, 246, 635, 1025, 1283
MlyI GAGTC 2 cut(s) 624, 1045
MmeI TCCRAC 1 cut(s) 667
MnlI CCTC 8 cut(s) 101, 284, 707, 721, 802, 829, 1015, 1087
Mph1103I ATGCAT 1 cut(s) 423
MroXI GAANNNNTTC 5 cut(s) 198, 217, 269, 453, 1254
MseI TTAA 6 cut(s) 150, 569, 695, 843, 918, 990
MslI CAYNNNNRTG 1 cut(s) 299
MspI CCGG 1 cut(s) 1261
MspR9I CCNGG 1 cut(s) 1187
MunI CAATTG 1 cut(s) 246
MvaI CCWGG 1 cut(s) 1187
MwoI GCNNNNNNNGC 2 cut(s) 418, 709
NdeII GATC 4 cut(s) 581, 765, 775, 912
NlaIII CATG 7 cut(s) 41, 418, 425, 442, 595, 625, 762
NlaIV GGNNCC 1 cut(s) 1184
NsiI ATGCAT 1 cut(s) 423
NspI RCATGY 2 cut(s) 41, 762
PaeI GCATGC 1 cut(s) 41
PagI TCATGA 1 cut(s) 414
PceI AGGCCT 1 cut(s) 1209
PciSI GCTCTTC 1 cut(s) 32
PdmI GAANNNNTTC 5 cut(s) 198, 217, 269, 453, 1254
PfeI GAWTC 3 cut(s) 464, 812, 1238
Pfl23II CGTACG 1 cut(s) 796
PkrI GCNGC 5 cut(s) 788, 822, 998, 1266, 1269
PleI GAGTC 2 cut(s) 624, 1045
PpsI GAGTC 2 cut(s) 624, 1045
Ppu21I YACGTR 1 cut(s) 99
Psp124BI GAGCTC 1 cut(s) 27
Psp1406I AACGTT 1 cut(s) 379
Psp6I CCWGG 1 cut(s) 1185
PspFI CCCAGC 1 cut(s) 686
PspGI CCWGG 1 cut(s) 1185
PspLI CGTACG 1 cut(s) 796
PspN4I GGNNCC 1 cut(s) 1184
PstI CTGCAG 1 cut(s) 375
PsuI RGATCY 1 cut(s) 581
RsaI GTAC 5 cut(s) 101, 657, 798, 1013, 1158
RsaNI GTAC 5 cut(s) 100, 656, 797, 1012, 1157
RseI CAYNNNNRTG 1 cut(s) 299
SacI GAGCTC 1 cut(s) 27
SapI GCTCTTC 1 cut(s) 32
SaqAI TTAA 6 cut(s) 150, 569, 695, 843, 918, 990
SatI GCNGC 5 cut(s) 787, 821, 997, 1265, 1268
Sau3AI GATC 4 cut(s) 581, 765, 775, 912
SchI GAGTC 2 cut(s) 624, 1045
ScrFI CCNGG 1 cut(s) 1187
SduI GDGCHC 1 cut(s) 27
SfaNI GCATC 2 cut(s) 232, 408
SfcI CTRYAG 1 cut(s) 371
SmiMI CAYNNNNRTG 1 cut(s) 299
SmlI CTYRAG 5 cut(s) 20, 82, 824, 1007, 1245
SmoI CTYRAG 5 cut(s) 20, 82, 824, 1007, 1245
SnaBI TACGTA 1 cut(s) 99
SphI GCATGC 1 cut(s) 41
Sse9I AATT 6 cut(s) 188, 213, 246, 635, 1025, 1283
SseBI AGGCCT 1 cut(s) 1209
SsiI CCGC 3 cut(s) 781, 820, 1303
SspMI CTAG 1 cut(s) 1277
SstI GAGCTC 1 cut(s) 27
StuI AGGCCT 1 cut(s) 1209
StyD4I CCNGG 1 cut(s) 1185
TaaI ACNGT 3 cut(s) 104, 394, 926
TaiI ACGT 3 cut(s) 101, 382, 1231
TaqI TCGA 3 cut(s) 774, 1073, 1201
TasI AATT 6 cut(s) 188, 213, 246, 635, 1025, 1283
TatI WGTACW 1 cut(s) 655
TauI GCSGC 1 cut(s) 823
TfiI GAWTC 3 cut(s) 464, 812, 1238
Tru1I TTAA 6 cut(s) 150, 569, 695, 843, 918, 990
Tru9I TTAA 6 cut(s) 150, 569, 695, 843, 918, 990
TscAI CASTG 9 cut(s) 123, 186, 370, 403, 670, 677, 757, 882, 929
TseI GCWGC 4 cut(s) 786, 996, 1264, 1267
TspDTI ATGAA 7 cut(s) 17, 21, 78, 206, 283, 317, 638
TspRI CASTG 9 cut(s) 123, 186, 370, 403, 670, 677, 757, 882, 929
XagI CCTNNNNNAGG 1 cut(s) 1019
XapI RAATTY 3 cut(s) 213, 1025, 1283
XceI RCATGY 2 cut(s) 41, 762
XmnI GAANNNNTTC 5 cut(s) 198, 217, 269, 453, 1254
XspI CTAG 1 cut(s) 1277
Zsp2I ATGCAT 1 cut(s) 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.