TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 5 - 53 | 2.1e-12 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 81 |
| AcsI | RAATTY | 2 cut(s) | 236, 271 |
| AcuI | CTGAAG | 1 cut(s) | 228 |
| AcyI | GRCGYC | 1 cut(s) | 202 |
| AdeI | CACNNNGTG | 1 cut(s) | 369 |
| AfaI | GTAC | 2 cut(s) | 304, 357 |
| AgeI | ACCGGT | 1 cut(s) | 78 |
| AgsI | TTSAA | 3 cut(s) | 257, 271, 287 |
| AhlI | ACTAGT | 1 cut(s) | 293 |
| Alw26I | GTCTC | 1 cut(s) | 322 |
| ApoI | RAATTY | 2 cut(s) | 236, 271 |
| AseI | ATTAAT | 1 cut(s) | 96 |
| AsiGI | ACCGGT | 1 cut(s) | 78 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| BanI | GGYRCC | 1 cut(s) | 81 |
| BccI | CCATC | 1 cut(s) | 26 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 133, 167 |
| BcoDI | GTCTC | 1 cut(s) | 322 |
| BcuI | ACTAGT | 1 cut(s) | 293 |
| BfaI | CTAG | 2 cut(s) | 180, 294 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 1 cut(s) | 83 |
| BmsI | GCATC | 1 cut(s) | 108 |
| BsaAI | YACGTR | 1 cut(s) | 355 |
| BsaHI | GRCGYC | 1 cut(s) | 202 |
| BsaJI | CCNNGG | 1 cut(s) | 306 |
| BsaWI | WCCGGW | 1 cut(s) | 78 |
| Bse118I | RCCGGY | 1 cut(s) | 78 |
| Bse1I | ACTGG | 1 cut(s) | 370 |
| BseDI | CCNNGG | 1 cut(s) | 306 |
| BseGI | GGATG | 1 cut(s) | 37 |
| BseMII | CTCAG | 1 cut(s) | 323 |
| BseNI | ACTGG | 1 cut(s) | 370 |
| BshNI | GGYRCC | 1 cut(s) | 81 |
| BshTI | ACCGGT | 1 cut(s) | 78 |
| BsiSI | CCGG | 1 cut(s) | 79 |
| BsiWI | CGTACG | 1 cut(s) | 355 |
| BsmAI | GTCTC | 1 cut(s) | 322 |
| BspCNI | CTCAG | 1 cut(s) | 324 |
| BspLI | GGNNCC | 1 cut(s) | 83 |
| BspT107I | GGYRCC | 1 cut(s) | 81 |
| BsrFI | RCCGGY | 1 cut(s) | 78 |
| BsrI | ACTGG | 1 cut(s) | 370 |
| BssAI | RCCGGY | 1 cut(s) | 78 |
| BssECI | CCNNGG | 1 cut(s) | 306 |
| BssNI | GRCGYC | 1 cut(s) | 202 |
| BssT1I | CCWWGG | 1 cut(s) | 306 |
| Bst6I | CTCTTC | 1 cut(s) | 320 |
| BstACI | GRCGYC | 1 cut(s) | 202 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 127 |
| BstBAI | YACGTR | 1 cut(s) | 355 |
| BstC8I | GCNNGC | 1 cut(s) | 159 |
| BstDEI | CTNAG | 1 cut(s) | 332 |
| BstF5I | GGATG | 1 cut(s) | 37 |
| BstMAI | GTCTC | 1 cut(s) | 322 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 127 |
| BstNSI | RCATGY | 1 cut(s) | 161 |
| BstSNI | TACGTA | 1 cut(s) | 355 |
| BtsCI | GGATG | 1 cut(s) | 37 |
| BtsIMutI | CAGTG | 1 cut(s) | 363 |
| Cac8I | GCNNGC | 1 cut(s) | 159 |
| Cfr10I | RCCGGY | 1 cut(s) | 78 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CseI | GACGC | 1 cut(s) | 191 |
| Csp6I | GTAC | 2 cut(s) | 303, 356 |
| CspAI | ACCGGT | 1 cut(s) | 78 |
| CviAII | CATG | 2 cut(s) | 122, 158 |
| CviJI | RGCY | 2 cut(s) | 42, 266 |
| CviKI_1 | RGCY | 2 cut(s) | 42, 266 |
| CviQI | GTAC | 2 cut(s) | 303, 356 |
| DdeI | CTNAG | 1 cut(s) | 332 |
| DraI | TTTAAA | 1 cut(s) | 316 |
| DraIII | CACNNNGTG | 1 cut(s) | 369 |
| Eam1104I | CTCTTC | 1 cut(s) | 320 |
| EarI | CTCTTC | 1 cut(s) | 320 |
| Eco105I | TACGTA | 1 cut(s) | 355 |
| Eco130I | CCWWGG | 1 cut(s) | 306 |
| Eco32I | GATATC | 1 cut(s) | 151 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| Eco57I | CTGAAG | 1 cut(s) | 228 |
| EcoO109I | RGGNCCY | 1 cut(s) | 67 |
| EcoRV | GATATC | 1 cut(s) | 151 |
| EcoT14I | CCWWGG | 1 cut(s) | 306 |
| EcoT22I | ATGCAT | 1 cut(s) | 123 |
| ErhI | CCWWGG | 1 cut(s) | 306 |
| FaeI | CATG | 2 cut(s) | 125, 161 |
| FaiI | YATR | 8 cut(s) | 20, 48, 116, 123, 138, 140, 159, 323 |
| FatI | CATG | 2 cut(s) | 121, 157 |
| FokI | GGATG | 1 cut(s) | 44 |
| FspBI | CTAG | 2 cut(s) | 180, 294 |
| HapII | CCGG | 1 cut(s) | 79 |
| HgaI | GACGC | 1 cut(s) | 191 |
| Hin1I | GRCGYC | 1 cut(s) | 202 |
| Hin1II | CATG | 2 cut(s) | 125, 161 |
| HinfI | GANTC | 3 cut(s) | 60, 280, 360 |
| HpaII | CCGG | 1 cut(s) | 79 |
| Hpy188III | TCNNGA | 3 cut(s) | 170, 206, 284 |
| HpyAV | CCTTC | 1 cut(s) | 251 |
| HpyCH4IV | ACGT | 1 cut(s) | 354 |
| HpyCH4V | TGCA | 4 cut(s) | 50, 121, 157, 161 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 127 |
| HpyF3I | CTNAG | 1 cut(s) | 332 |
| HpySE526I | ACGT | 1 cut(s) | 354 |
| Hsp92I | GRCGYC | 1 cut(s) | 202 |
| Hsp92II | CATG | 2 cut(s) | 125, 161 |
| LmnI | GCTCC | 1 cut(s) | 345 |
| LpnPI | CCDG | 5 cut(s) | 42, 92, 219, 248, 351 |
| LweI | GCATC | 1 cut(s) | 108 |
| MaeI | CTAG | 2 cut(s) | 180, 294 |
| MaeII | ACGT | 1 cut(s) | 354 |
| MaeIII | GTNAC | 1 cut(s) | 88 |
| MboII | GAAGA | 2 cut(s) | 221, 337 |
| MluCI | AATT | 3 cut(s) | 236, 252, 271 |
| MlyI | GAGTC | 2 cut(s) | 289, 354 |
| MmeI | TCCRAC | 1 cut(s) | 367 |
| MnlI | CCTC | 1 cut(s) | 80 |
| Mph1103I | ATGCAT | 1 cut(s) | 123 |
| MseI | TTAA | 2 cut(s) | 96, 315 |
| MspI | CCGG | 1 cut(s) | 79 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 127 |
| NlaIII | CATG | 2 cut(s) | 125, 161 |
| NlaIV | GGNNCC | 1 cut(s) | 83 |
| NmeAIII | GCCGAG | 1 cut(s) | 303 |
| NsiI | ATGCAT | 1 cut(s) | 123 |
| NspI | RCATGY | 1 cut(s) | 161 |
| PaeI | GCATGC | 1 cut(s) | 161 |
| PfeI | GAWTC | 1 cut(s) | 60 |
| Pfl23II | CGTACG | 1 cut(s) | 355 |
| PinAI | ACCGGT | 1 cut(s) | 78 |
| PleI | GAGTC | 2 cut(s) | 288, 354 |
| PpsI | GAGTC | 2 cut(s) | 288, 354 |
| Ppu21I | YACGTR | 1 cut(s) | 355 |
| PpuMI | RGGWCCY | 1 cut(s) | 67 |
| PshBI | ATTAAT | 1 cut(s) | 96 |
| Psp5II | RGGWCCY | 1 cut(s) | 67 |
| PspLI | CGTACG | 1 cut(s) | 355 |
| PspN4I | GGNNCC | 1 cut(s) | 83 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| PspPPI | RGGWCCY | 1 cut(s) | 67 |
| RsaI | GTAC | 2 cut(s) | 304, 357 |
| RsaNI | GTAC | 2 cut(s) | 303, 356 |
| SaqAI | TTAA | 2 cut(s) | 96, 315 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SchI | GAGTC | 2 cut(s) | 289, 354 |
| SetI | ASST | 3 cut(s) | 69, 262, 357 |
| SfaNI | GCATC | 1 cut(s) | 108 |
| SinI | GGWCC | 1 cut(s) | 67 |
| SnaBI | TACGTA | 1 cut(s) | 355 |
| SpeI | ACTAGT | 1 cut(s) | 293 |
| SphI | GCATGC | 1 cut(s) | 161 |
| Sse9I | AATT | 3 cut(s) | 236, 252, 271 |
| SspMI | CTAG | 2 cut(s) | 180, 294 |
| StyI | CCWWGG | 1 cut(s) | 306 |
| TaiI | ACGT | 1 cut(s) | 357 |
| TasI | AATT | 3 cut(s) | 236, 252, 271 |
| TfiI | GAWTC | 1 cut(s) | 60 |
| Tru1I | TTAA | 2 cut(s) | 96, 315 |
| Tru9I | TTAA | 2 cut(s) | 96, 315 |
| TscAI | CASTG | 1 cut(s) | 370 |
| TspDTI | ATGAA | 1 cut(s) | 338 |
| TspGWI | ACGGA | 1 cut(s) | 202 |
| TspRI | CASTG | 1 cut(s) | 370 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |
| VspI | ATTAAT | 1 cut(s) | 96 |
| XapI | RAATTY | 2 cut(s) | 236, 271 |
| XceI | RCATGY | 1 cut(s) | 161 |
| XspI | CTAG | 2 cut(s) | 180, 294 |
| Zsp2I | ATGCAT | 1 cut(s) | 123 |