pycom08g17560

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
17788326 .. 17790947
2622 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g17560.1

Sequence Viewer

Length: 2319 bp
ATGGTCGGAATTTGGGGCATGGGTGGAATGGGGAAAACATCAGTTGCAAAAGCCATCTATAACAAGTTCTACCATAGCTTTGTGTACAAAAGTTTCCTTGGAAATGTTAGGGAAACTGCAAAGGAATCGAATAGCATGACGAATTTGCAAGAAAAGCTTCTTTCTGATATCTTCAAACCAACCAAGGTGGAGGTTGGTGATGTTCATAGAGGTATTAATCTGATAAAAGAAAAACTTCGAAGCAGAGAGGTACTGGTCATAATTGACGATGTAGATCATGTGGACCAATTAAATGCTTTAGCTATAGCCCGGGACTCCTTTGGTCGAGGAAGTAAAATTTTTATTACAACCAGAGATCGACACCTACTGGAGCAAGTTGAAGTTAATATAATATATCTGGCTCGAAAAATGAAGGAAGAAGAAGCTCTTGAGCTCTTTAGTTGGCATGCCTTTCGAAATCCCTGTCCTAATGAAGAATACAGTGAACTGACAAGAAGTGTTCTTGGTTACTGTGGAGGTTTACCGCTTGCTCTTGAAGTTTTAGGTTCTTTTCTGTTTAAAAGAAGCTTAAGAGATTGGACAAGCACATTGAAGAAGTTGGAAAAAATTCCTCGTTTTGAAATTCAAGAAAAGCTTAAAATAAGCTTTGATGCACTAAGTGATGAGGATGAGAGGGAAATATTCCTTGATATATCTTGTTTCTTCATAGGAATGGACAGGAACTATGTCACAAGGATCCTGGACGGTTGTGGGTTTTTTGCAGAAATTGGAATTAGTGTCCTCCTGCAACGATGCCTTGTAACTGTTGATGAGAAAAACAAGCTCGTGATGCATGATCTACTTCGAGACATGGGCAGAGAAATCGTGCGTGCAAAATTTCCAAACGACCCTGGCAGGTGTAGTAGATTGTGGTGCCAAGAAGATGCAATAGGTGTACTGACGGACAAATCTGGAACAGAAAAAATTGAAGGACTCGCTCTAAATTTGCTAAGACCAGACAAAGCTAATTTCAATATGAAAGCTTTTAAAAAGATGAAGAGTCTGAGATTGCTCCAACTTAATCGTGTACAGCTCACTGGAGAGTACAAACATCTTTCCGAAAAGTTAAGATGGATTTGCTGGCGAGGATTCCCTCTAAAGTTCATACCAAAAAAAGCATTAAATCAATTAAGAAGCCTAGTTTCTATCGACCTACGGTACAGCAACCTCAGACGGTTTTGGGAGCATTCTATGTTGCTCGAGAAGTTGAAGATTCTGAATCTCAGCCATTCCTACTTCCTAAAACAATTGCCAAACTTCTCAAAACTCCCAAATCTCGAGTATTTGGTACTCAAGGGCTGCAAGAGCTTGCTCGAGATTCACCACTCTGTAGGATGTCTTGAAAGACTTGCTTTGGTAAATCTTAAAGACTGCATAATGCTCAAGGATCTTCCAAAGAGTTTCTATAAGTTGAAACACGTTGAAACTCTTGTTCTTTCTGGCTGTTCAAGATTTCAAAACTTGGTTGCGGATATAGGAGAGATGGTATCATTGACAACTCTTCTTATAGATAACACGGCCATAGAAGAATTACCATATTCTTCCATAGCACGGTTGAAGAACCTGACACGTTTATCTCTATGTGGTCTGAAACTTATAGAACCCAACCCTTCCGTTTGGCCTTTGATATTGACAAGAGAATATCCTCCTGAATTACATTGCTCAATTTCTTCCGAGGATATCAGGACCATCGACTTGTTTAGCAACGCATTTCATATCCTTCCGAGGAATCATAAGCGCAAGACAACTAGTGGAGATGGTGTCATTTTCCCCCCGGGAAATGATATTGCCAAGTGGTTCACAAATGTCGACAATGAGGGTGATCGAGTCTGTTTCCAAGTGCCTCAAATCACTGGTTCTAACTTAAAATCGTTGACTGTGTGCACCGTTTATTCTTCATCATTACACAAGGACGCACCTCTTAATCATTTTGCTATATTTATTACGAATCATACCAAGATCATCAGCTTCGTTGTCCGGCCAATGGATCCCTACACAATAACTTCAAATGAAGTCATTTGGCAAGGACATTTATCAAACAAGGAGCTCAGTTTGGAAAGGGGAGACTCCATTGAAGTTTATATTGTGATGGGATCTGGTTTCAGGGTGAAGAAAACGGGGGTACATCTCGTATGGGATCCTGAATTGATCAACGAAAATGTGATTGAGTTCGAGGCTATCCCATATGCTTATTTCCGTAGTGATGTGGAGTATGAGGCAGGACCGAGTCATGTCTCATTAGATGAGAATCGACCACGCGACGAGTTGTGGTACGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

773

Amino Acids

88.66

Weight (kDa)

8.49

Isoelectric Point (pI)

34.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 153 5e-17 NB-ARC domain
WHD_ROQ1 PF23282 222 - 291 6.6e-21 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 885
Acc36I ACCTGC 1 cut(s) 885
AccB1I GGYRCC 1 cut(s) 912
AccI GTMKAC 1 cut(s) 1848
AccII CGCG 1 cut(s) 2298
AciI CCGC 2 cut(s) 524, 1508
AclWI GGATC 8 cut(s) 730, 743, 1434, 2021, 2034, 2140, 2171, 2184
AcoI YGGCCR 2 cut(s) 1557, 2018
AcsI RAATTY 7 cut(s) 9, 142, 336, 606, 621, 875, 982
AdeI CACNNNGTG 1 cut(s) 659
AfaI GTAC 9 cut(s) 86, 252, 936, 1068, 1085, 1199, 1329, 2163, 2312
AfiI CCNNNNNNNGG 2 cut(s) 1590, 2023
AflII CTTAAG 1 cut(s) 568
AflIII ACRYGT 2 cut(s) 1456, 1607
AhlI ACTAGT 1 cut(s) 1787
AjnI CCWGG 2 cut(s) 738, 889
Alw21I GWGCWC 3 cut(s) 435, 1925, 2088
Alw26I GTCTC 3 cut(s) 840, 2097, 2278
Alw44I GTGCAC 1 cut(s) 1921
AlwI GGATC 8 cut(s) 730, 743, 1434, 2021, 2034, 2140, 2171, 2184
Ama87I CYCGRG 5 cut(s) 309, 1238, 1316, 1352, 1813
AoxI GGCC 3 cut(s) 1557, 1658, 2018
ApaLI GTGCAC 1 cut(s) 1921
ApeKI GCWGC 1 cut(s) 1338
ApoI RAATTY 7 cut(s) 9, 142, 336, 606, 621, 875, 982
ArsI GACNNNNNNTTYG 2 cut(s) 448, 480
AseI ATTAAT 1 cut(s) 216
Asp700I GAANNNNTTC 3 cut(s) 156, 234, 606
AspLEI GCGC 1 cut(s) 1779
AspS9I GGNCC 3 cut(s) 283, 1725, 2261
AsuC2I CCSGG 4 cut(s) 310, 311, 1814, 1815
AsuHPI GGTGA 4 cut(s) 209, 1352, 1871, 2158
AsuII TTCGAA 2 cut(s) 238, 454
AvaI CYCGRG 5 cut(s) 309, 1238, 1316, 1352, 1813
AvaII GGWCC 3 cut(s) 283, 1725, 2261
BaeGI GKGCMC 1 cut(s) 1925
BamHI GGATCC 3 cut(s) 735, 2026, 2176
BanI GGYRCC 1 cut(s) 912
BanII GRGCYC 2 cut(s) 435, 2088
BauI CACGAG 1 cut(s) 824
Bbv12I GWGCWC 3 cut(s) 435, 1925, 2088
BbvI GCAGC 1 cut(s) 1325
BccI CCATC 6 cut(s) 62, 1104, 1516, 1736, 1790, 2122
BceAI ACGGC 1 cut(s) 1572
BcgI CGANNNNNNTGC 6 cut(s) 108, 142, 434, 468, 844, 878
BciT130I CCWGG 2 cut(s) 740, 891
BclI TGATCA 1 cut(s) 2187
BcnI CCSGG 4 cut(s) 310, 311, 1814, 1815
BcoDI GTCTC 3 cut(s) 840, 2097, 2278
BcuI ACTAGT 1 cut(s) 1787
BfaI CTAG 2 cut(s) 1178, 1788
BfmI CTRYAG 2 cut(s) 303, 1368
BfrI CTTAAG 1 cut(s) 568
BfuAI ACCTGC 1 cut(s) 885
BisI GCNGC 1 cut(s) 1339
BlsI GCNGC 1 cut(s) 1340
Bme1390I CCNGG 6 cut(s) 310, 311, 740, 891, 1814, 1815
Bme18I GGWCC 3 cut(s) 283, 1725, 2261
BmeT110I CYCGRG 5 cut(s) 309, 1238, 1316, 1352, 1813
BmgT120I GGNCC 3 cut(s) 283, 1725, 2261
BmiI GGNNCC 4 cut(s) 737, 914, 2028, 2178
BmrFI CCNGG 6 cut(s) 310, 311, 740, 891, 1814, 1815
BmsI GCATC 4 cut(s) 640, 782, 819, 913
BpmI CTGGAG 2 cut(s) 389, 1098
Bpu14I TTCGAA 2 cut(s) 238, 454
BpuEI CTTGAG 3 cut(s) 449, 1316, 1406
BpuMI CCSGG 4 cut(s) 310, 311, 1814, 1815
BsaAI YACGTR 1 cut(s) 2314
BsaBI GATNNNNATC 2 cut(s) 273, 2286
BsaJI CCNNGG 8 cut(s) 97, 183, 309, 889, 1713, 1763, 1812, 1813
BsaXI ACNNNNNCTCC 4 cut(s) 1509, 1539, 1785, 1815
Bsc4I CCNNNNNNNGG 2 cut(s) 1590, 2023
Bse1I ACTGG 4 cut(s) 258, 372, 1081, 1897
Bse3DI GCAATG 1 cut(s) 1696
Bse8I GATNNNNATC 2 cut(s) 273, 2286
BseBI CCWGG 2 cut(s) 740, 891
BseDI CCNNGG 8 cut(s) 97, 183, 309, 889, 1713, 1763, 1812, 1813
BseGI GGATG 2 cut(s) 673, 1379
BseJI GATNNNNATC 2 cut(s) 273, 2286
BseLI CCNNNNNNNGG 2 cut(s) 1590, 2023
BseMI GCAATG 1 cut(s) 1696
BseMII CTCAG 4 cut(s) 1034, 1222, 1276, 2101
BseNI ACTGG 4 cut(s) 258, 372, 1081, 1897
BseSI GKGCMC 1 cut(s) 1925
BseXI GCAGC 1 cut(s) 1325
Bsh1236I CGCG 1 cut(s) 2298
BshFI GGCC 3 cut(s) 1559, 1660, 2020
BshNI GGYRCC 1 cut(s) 912
BsiHKAI GWGCWC 3 cut(s) 435, 1925, 2088
BsiHKCI CYCGRG 5 cut(s) 309, 1238, 1316, 1352, 1813
BsiSI CCGG 3 cut(s) 310, 1814, 2017
BslFI GGGAC 1 cut(s) 326
BslI CCNNNNNNNGG 2 cut(s) 1590, 2023
BsmAI GTCTC 3 cut(s) 840, 2097, 2278
BsmFI GGGAC 1 cut(s) 326
BsmI GAATGC 1 cut(s) 1225
BsnI GGCC 3 cut(s) 1559, 1660, 2020
BsoBI CYCGRG 5 cut(s) 309, 1238, 1316, 1352, 1813
Bsp119I TTCGAA 2 cut(s) 238, 454
Bsp1286I GDGCHC 3 cut(s) 435, 1925, 2088
Bsp1407I TGTACA 2 cut(s) 84, 1066
BspACI CCGC 2 cut(s) 524, 1508
BspANI GGCC 3 cut(s) 1559, 1660, 2020
BspCNI CTCAG 4 cut(s) 1035, 1221, 1275, 2100
BspFNI CGCG 1 cut(s) 2298
BspLI GGNNCC 4 cut(s) 737, 914, 2028, 2178
BspMI ACCTGC 1 cut(s) 885
BspPI GGATC 8 cut(s) 730, 743, 1434, 2021, 2034, 2140, 2171, 2184
BspT104I TTCGAA 2 cut(s) 238, 454
BspT107I GGYRCC 1 cut(s) 912
BspTI CTTAAG 1 cut(s) 568
BsrDI GCAATG 1 cut(s) 1696
BsrGI TGTACA 2 cut(s) 84, 1066
BsrI ACTGG 4 cut(s) 258, 372, 1081, 1897
BssECI CCNNGG 8 cut(s) 97, 183, 309, 889, 1713, 1763, 1812, 1813
BssSI CACGAG 1 cut(s) 824
BssT1I CCWWGG 2 cut(s) 97, 183
Bst2BI CACGAG 1 cut(s) 824
Bst2UI CCWGG 2 cut(s) 740, 891
Bst4CI ACNGT 9 cut(s) 482, 512, 746, 805, 1197, 1215, 1593, 1918, 1927
Bst6I CTCTTC 2 cut(s) 1031, 1545
BstAFI CTTAAG 1 cut(s) 568
BstAUI TGTACA 2 cut(s) 84, 1066
BstBAI YACGTR 1 cut(s) 2314
BstBI TTCGAA 2 cut(s) 238, 454
BstC8I GCNNGC 5 cut(s) 447, 528, 870, 1121, 1349
BstDEI CTNAG 6 cut(s) 656, 989, 1043, 1208, 1262, 2087
BstF5I GGATG 2 cut(s) 673, 1379
BstFNI CGCG 1 cut(s) 2298
BstHHI GCGC 1 cut(s) 1779
BstMAI GTCTC 3 cut(s) 840, 2097, 2278
BstMWI GCNNNNNNNGC 3 cut(s) 154, 829, 1344
BstNI CCWGG 2 cut(s) 740, 891
BstNSI RCATGY 1 cut(s) 449
BstSCI CCNGG 6 cut(s) 308, 309, 738, 889, 1812, 1813
BstSFI CTRYAG 2 cut(s) 303, 1368
BstSLI GKGCMC 1 cut(s) 1925
BstSNI TACGTA 1 cut(s) 2314
BstUI CGCG 1 cut(s) 2298
BstV1I GCAGC 1 cut(s) 1325
BstX2I RGATCY 5 cut(s) 735, 1426, 2026, 2132, 2176
BstYI RGATCY 5 cut(s) 735, 1426, 2026, 2132, 2176
BsuRI GGCC 3 cut(s) 1559, 1660, 2020
BtsCI GGATG 2 cut(s) 673, 1379
BtsIMutI CAGTG 3 cut(s) 487, 1074, 1890
BveI ACCTGC 1 cut(s) 885
Cac8I GCNNGC 5 cut(s) 447, 528, 870, 1121, 1349
CfoI GCGC 1 cut(s) 1779
Cfr13I GGNCC 3 cut(s) 283, 1725, 2261
Cfr9I CCCGGG 2 cut(s) 309, 1813
CseI GACGC 1 cut(s) 1961
Csp6I GTAC 9 cut(s) 85, 251, 935, 1067, 1084, 1198, 1328, 2162, 2311
CspCI CAANNNNNGTGG 2 cut(s) 168, 203
CviAII CATG 7 cut(s) 19, 136, 278, 446, 833, 850, 2270
CviQI GTAC 9 cut(s) 85, 251, 935, 1067, 1084, 1198, 1328, 2162, 2311
DdeI CTNAG 6 cut(s) 656, 989, 1043, 1208, 1262, 2087
DraI TTTAAA 2 cut(s) 559, 1027
DraIII CACNNNGTG 1 cut(s) 659
EaeI YGGCCR 2 cut(s) 1557, 2018
Eam1104I CTCTTC 2 cut(s) 1031, 1545
EarI CTCTTC 2 cut(s) 1031, 1545
Ecl136II GAGCTC 2 cut(s) 433, 2086
Eco105I TACGTA 1 cut(s) 2314
Eco130I CCWWGG 2 cut(s) 97, 183
Eco24I GRGCYC 2 cut(s) 435, 2088
Eco32I GATATC 2 cut(s) 169, 1720
Eco47I GGWCC 3 cut(s) 283, 1725, 2261
Eco53kI GAGCTC 2 cut(s) 433, 2086
Eco88I CYCGRG 5 cut(s) 309, 1238, 1316, 1352, 1813
EcoICRI GAGCTC 2 cut(s) 433, 2086
EcoRII CCWGG 2 cut(s) 738, 889
EcoRV GATATC 2 cut(s) 169, 1720
EcoT14I CCWWGG 2 cut(s) 97, 183
EcoT22I ATGCAT 1 cut(s) 834
EcoT38I GRGCYC 2 cut(s) 435, 2088
ErhI CCWWGG 2 cut(s) 97, 183
FaeI CATG 7 cut(s) 22, 139, 281, 449, 836, 853, 2273
FaqI GGGAC 1 cut(s) 326
FatI CATG 7 cut(s) 18, 135, 277, 445, 832, 849, 2269
FauNDI CATATG 1 cut(s) 2224
FbaI TGATCA 1 cut(s) 2187
FblI GTMKAC 1 cut(s) 1848
Fnu4HI GCNGC 1 cut(s) 1339
FokI GGATG 2 cut(s) 680, 1386
FriOI GRGCYC 2 cut(s) 435, 2088
Fsp4HI GCNGC 1 cut(s) 1339
FspBI CTAG 2 cut(s) 1178, 1788
GlaI GCGC 1 cut(s) 1778
GluI GCNGC 1 cut(s) 1339
GsuI CTGGAG 2 cut(s) 389, 1098
HaeIII GGCC 3 cut(s) 1559, 1660, 2020
HapII CCGG 3 cut(s) 310, 1814, 2017
HgaI GACGC 1 cut(s) 1961
HhaI GCGC 1 cut(s) 1779
Hin1II CATG 7 cut(s) 22, 139, 281, 449, 836, 853, 2273
Hin6I GCGC 1 cut(s) 1777
HinP1I GCGC 1 cut(s) 1777
HincII GTYRAC 2 cut(s) 1849, 1914
HindII GTYRAC 2 cut(s) 1849, 1914
HindIII AAGCTT 5 cut(s) 155, 565, 632, 643, 1020
HpaII CCGG 3 cut(s) 310, 1814, 2017
HphI GGTGA 4 cut(s) 209, 1352, 1871, 2158
Hpy99I CGWCG 1 cut(s) 2303
HpyAV CCTTC 4 cut(s) 406, 962, 1659, 1769
HpyCH4III ACNGT 9 cut(s) 482, 512, 746, 805, 1197, 1215, 1593, 1918, 1927
HpyCH4IV ACGT 3 cut(s) 1458, 1609, 2313
HpyF10VI GCNNNNNNNGC 3 cut(s) 154, 829, 1344
HpyF3I CTNAG 6 cut(s) 656, 989, 1043, 1208, 1262, 2087
HpySE526I ACGT 3 cut(s) 1458, 1609, 2313
Hsp92II CATG 7 cut(s) 22, 139, 281, 449, 836, 853, 2273
HspAI GCGC 1 cut(s) 1777
Ksp22I TGATCA 1 cut(s) 2187
LmnI GCTCC 4 cut(s) 370, 1056, 1222, 2083
Lsp1109I GCAGC 1 cut(s) 1325
LweI GCATC 4 cut(s) 640, 782, 819, 913
MaeI CTAG 2 cut(s) 1178, 1788
MaeII ACGT 3 cut(s) 1458, 1609, 2313
MaeIII GTNAC 3 cut(s) 506, 727, 799
MfeI CAATTG 1 cut(s) 1286
MflI RGATCY 5 cut(s) 735, 1426, 2026, 2132, 2176
MhlI GDGCHC 3 cut(s) 435, 1925, 2088
MlyI GAGTC 6 cut(s) 308, 966, 1048, 1875, 2099, 2275
MmeI TCCRAC 2 cut(s) 579, 1078
Mph1103I ATGCAT 1 cut(s) 834
MroXI GAANNNNTTC 3 cut(s) 156, 234, 606
MslI CAYNNNNRTG 1 cut(s) 710
MspCI CTTAAG 1 cut(s) 568
MspI CCGG 3 cut(s) 310, 1814, 2017
MspR9I CCNGG 6 cut(s) 310, 311, 740, 891, 1814, 1815
MunI CAATTG 1 cut(s) 1286
Mva1269I GAATGC 1 cut(s) 1225
MvaI CCWGG 2 cut(s) 740, 891
MvnI CGCG 1 cut(s) 2298
MwoI GCNNNNNNNGC 3 cut(s) 154, 829, 1344
NciI CCSGG 4 cut(s) 310, 311, 1814, 1815
NdeI CATATG 1 cut(s) 2224
NlaIII CATG 7 cut(s) 22, 139, 281, 449, 836, 853, 2273
NlaIV GGNNCC 4 cut(s) 737, 914, 2028, 2178
NmuCI GTSAC 1 cut(s) 727
NsiI ATGCAT 1 cut(s) 834
NspI RCATGY 1 cut(s) 449
NspV TTCGAA 2 cut(s) 238, 454
PaeI GCATGC 1 cut(s) 449
PaeR7I CTCGAG 3 cut(s) 1238, 1316, 1352
PaqCI CACCTGC 1 cut(s) 885
PctI GAATGC 1 cut(s) 1225
PdmI GAANNNNTTC 3 cut(s) 156, 234, 606
PfeI GAWTC 8 cut(s) 125, 1128, 1252, 1258, 1357, 1768, 1987, 2287
PflFI GACNNNGTC 1 cut(s) 2265
PfoI TCCNGGA 1 cut(s) 738
PkrI GCNGC 1 cut(s) 1340
PleI GAGTC 6 cut(s) 308, 966, 1047, 1874, 2099, 2274
PpsI GAGTC 6 cut(s) 308, 966, 1047, 1874, 2099, 2274
Ppu21I YACGTR 1 cut(s) 2314
PshBI ATTAAT 1 cut(s) 216
Psp124BI GAGCTC 2 cut(s) 435, 2088
Psp6I CCWGG 2 cut(s) 738, 889
PspGI CCWGG 2 cut(s) 738, 889
PspN4I GGNNCC 4 cut(s) 737, 914, 2028, 2178
PspPI GGNCC 3 cut(s) 283, 1725, 2261
PsuI RGATCY 5 cut(s) 735, 1426, 2026, 2132, 2176
PsyI GACNNNGTC 1 cut(s) 2265
RsaI GTAC 9 cut(s) 86, 252, 936, 1068, 1085, 1199, 1329, 2163, 2312
RsaNI GTAC 9 cut(s) 85, 251, 935, 1067, 1084, 1198, 1328, 2162, 2311
RseI CAYNNNNRTG 1 cut(s) 710
SacI GAGCTC 2 cut(s) 435, 2088
SalI GTCGAC 1 cut(s) 1847
SatI GCNGC 1 cut(s) 1339
Sau96I GGNCC 3 cut(s) 283, 1725, 2261
SchI GAGTC 6 cut(s) 308, 966, 1048, 1875, 2099, 2275
ScrFI CCNGG 6 cut(s) 310, 311, 740, 891, 1814, 1815
SduI GDGCHC 3 cut(s) 435, 1925, 2088
SfaNI GCATC 4 cut(s) 640, 782, 819, 913
SfcI CTRYAG 2 cut(s) 303, 1368
Sfr274I CTCGAG 3 cut(s) 1238, 1316, 1352
SfuI TTCGAA 2 cut(s) 238, 454
SinI GGWCC 3 cut(s) 283, 1725, 2261
SlaI CTCGAG 3 cut(s) 1238, 1316, 1352
SmaI CCCGGG 2 cut(s) 311, 1815
SmiMI CAYNNNNRTG 1 cut(s) 710
SmlI CTYRAG 7 cut(s) 428, 568, 1238, 1316, 1331, 1352, 1421
SmoI CTYRAG 7 cut(s) 428, 568, 1238, 1316, 1331, 1352, 1421
SnaBI TACGTA 1 cut(s) 2314
SpeI ACTAGT 1 cut(s) 1787
SphI GCATGC 1 cut(s) 449
SsiI CCGC 2 cut(s) 524, 1508
SspI AATATT 1 cut(s) 681
SspMI CTAG 2 cut(s) 1178, 1788
SstI GAGCTC 2 cut(s) 435, 2088
StyD4I CCNGG 6 cut(s) 308, 309, 738, 889, 1812, 1813
StyI CCWWGG 2 cut(s) 97, 183
TaaI ACNGT 9 cut(s) 482, 512, 746, 805, 1197, 1215, 1593, 1918, 1927
TaiI ACGT 3 cut(s) 1461, 1612, 2316
TaqII GACCGA 1 cut(s) 2278
TatI WGTACW 4 cut(s) 84, 934, 1066, 1083
TfiI GAWTC 8 cut(s) 125, 1128, 1252, 1258, 1357, 1768, 1987, 2287
TscAI CASTG 3 cut(s) 487, 1081, 1897
TseFI GTSAC 1 cut(s) 727
TseI GCWGC 1 cut(s) 1338
Tsp45I GTSAC 1 cut(s) 727
TspGWI ACGGA 3 cut(s) 956, 1642, 2225
TspMI CCCGGG 2 cut(s) 309, 1813
TspRI CASTG 3 cut(s) 487, 1081, 1897
Tth111I GACNNNGTC 1 cut(s) 2265
Vha464I CTTAAG 1 cut(s) 568
VneI GTGCAC 1 cut(s) 1921
VpaK11BI GGWCC 3 cut(s) 283, 1725, 2261
VspI ATTAAT 1 cut(s) 216
XapI RAATTY 7 cut(s) 9, 142, 336, 606, 621, 875, 982
XceI RCATGY 1 cut(s) 449
XhoI CTCGAG 3 cut(s) 1238, 1316, 1352
XmaI CCCGGG 2 cut(s) 309, 1813
XmiI GTMKAC 1 cut(s) 1848
XmnI GAANNNNTTC 3 cut(s) 156, 234, 606
XspI CTAG 2 cut(s) 1178, 1788
Zsp2I ATGCAT 1 cut(s) 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.