TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 205 - 292 | 5.6e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 213 - 288 | 1.7e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 294 - 357 | 1e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 360 - 428 | 2.8e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 651 |
| AccI | GTMKAC | 1 cut(s) | 716 |
| AciI | CCGC | 2 cut(s) | 429, 1831 |
| AcsI | RAATTY | 5 cut(s) | 653, 866, 1079, 1425, 1700 |
| AcuI | CTGAAG | 2 cut(s) | 150, 1279 |
| AfaI | GTAC | 9 cut(s) | 181, 375, 735, 948, 1161, 1422, 1782, 1965, 1989 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 533, 746, 959, 1580 |
| AhlI | ACTAGT | 3 cut(s) | 340, 1387, 1930 |
| AjnI | CCWGG | 1 cut(s) | 61 |
| AleI | CACNNNNGTG | 1 cut(s) | 1296 |
| AluBI | AGCT | 6 cut(s) | 238, 583, 1306, 1617, 1630, 1839 |
| AluI | AGCT | 6 cut(s) | 238, 583, 1306, 1617, 1630, 1839 |
| Alw21I | GWGCWC | 2 cut(s) | 240, 1308 |
| Alw26I | GTCTC | 4 cut(s) | 620, 833, 1046, 1667 |
| AoxI | GGCC | 1 cut(s) | 158 |
| ApeKI | GCWGC | 1 cut(s) | 999 |
| ApoI | RAATTY | 5 cut(s) | 653, 866, 1079, 1425, 1700 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1221 |
| AsuHPI | GGTGA | 9 cut(s) | 50, 444, 515, 571, 784, 997, 1491, 1562, 1618 |
| BanII | GRGCYC | 2 cut(s) | 240, 1308 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 474, 506 |
| BbsI | GAAGAC | 2 cut(s) | 1323, 1551 |
| Bbv12I | GWGCWC | 2 cut(s) | 240, 1308 |
| BbvI | GCAGC | 1 cut(s) | 986 |
| BceAI | ACGGC | 1 cut(s) | 1261 |
| BciT130I | CCWGG | 1 cut(s) | 63 |
| BciVI | GTATCC | 1 cut(s) | 922 |
| BcoDI | GTCTC | 4 cut(s) | 620, 833, 1046, 1667 |
| BcuI | ACTAGT | 3 cut(s) | 340, 1387, 1930 |
| BfaI | CTAG | 3 cut(s) | 341, 1388, 1931 |
| BfuI | GTATCC | 1 cut(s) | 922 |
| BglII | AGATCT | 1 cut(s) | 1270 |
| BisI | GCNGC | 1 cut(s) | 1000 |
| BlsI | GCNGC | 1 cut(s) | 1001 |
| Bme1390I | CCNGG | 1 cut(s) | 63 |
| BmiI | GGNNCC | 4 cut(s) | 391, 433, 1438, 1981 |
| BmrFI | CCNGG | 1 cut(s) | 63 |
| BmsI | GCATC | 6 cut(s) | 776, 1331, 1392, 1842, 1874, 1935 |
| BpiI | GAAGAC | 2 cut(s) | 1323, 1551 |
| Bpu10I | CCTNAGC | 2 cut(s) | 566, 1613 |
| BsaAI | YACGTR | 1 cut(s) | 1843 |
| BsaJI | CCNNGG | 7 cut(s) | 61, 555, 596, 809, 1022, 1643, 1983 |
| BsaWI | WCCGGW | 2 cut(s) | 454, 1501 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 533, 746, 959, 1580 |
| Bse1I | ACTGG | 3 cut(s) | 375, 1422, 1965 |
| Bse3DI | GCAATG | 1 cut(s) | 503 |
| BseBI | CCWGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 7 cut(s) | 61, 555, 596, 809, 1022, 1643, 1983 |
| BseGI | GGATG | 5 cut(s) | 91, 791, 1346, 1697, 1889 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 533, 746, 959, 1580 |
| BseMI | GCAATG | 1 cut(s) | 503 |
| BseMII | CTCAG | 7 cut(s) | 200, 439, 686, 899, 1112, 1486, 1733 |
| BseNI | ACTGG | 3 cut(s) | 375, 1422, 1965 |
| BseXI | GCAGC | 1 cut(s) | 986 |
| BshFI | GGCC | 1 cut(s) | 160 |
| BsiHKAI | GWGCWC | 2 cut(s) | 240, 1308 |
| BsiSI | CCGG | 2 cut(s) | 455, 1502 |
| BslFI | GGGAC | 3 cut(s) | 374, 455, 1502 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 533, 746, 959, 1580 |
| BsmAI | GTCTC | 4 cut(s) | 620, 833, 1046, 1667 |
| BsmFI | GGGAC | 3 cut(s) | 374, 455, 1502 |
| BsmI | GAATGC | 2 cut(s) | 299, 798 |
| BsnI | GGCC | 1 cut(s) | 160 |
| Bsp1286I | GDGCHC | 2 cut(s) | 240, 1308 |
| Bsp143I | GATC | 5 cut(s) | 88, 421, 1270, 1468, 1848 |
| BspACI | CCGC | 2 cut(s) | 429, 1831 |
| BspANI | GGCC | 1 cut(s) | 160 |
| BspCNI | CTCAG | 7 cut(s) | 201, 438, 687, 900, 1113, 1485, 1734 |
| BspLI | GGNNCC | 4 cut(s) | 391, 433, 1438, 1981 |
| BsrDI | GCAATG | 1 cut(s) | 503 |
| BsrI | ACTGG | 3 cut(s) | 375, 1422, 1965 |
| BssECI | CCNNGG | 7 cut(s) | 61, 555, 596, 809, 1022, 1643, 1983 |
| BssMI | GATC | 5 cut(s) | 88, 421, 1270, 1468, 1848 |
| BssNAI | GTATAC | 1 cut(s) | 717 |
| BssT1I | CCWWGG | 6 cut(s) | 555, 596, 809, 1022, 1643, 1983 |
| Bst1107I | GTATAC | 1 cut(s) | 717 |
| Bst2UI | CCWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 2 cut(s) | 860, 1073 |
| Bst6I | CTCTTC | 8 cut(s) | 477, 597, 810, 849, 1023, 1062, 1644, 1683 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 10 |
| BstBAI | YACGTR | 1 cut(s) | 1843 |
| BstF5I | GGATG | 5 cut(s) | 91, 791, 1346, 1697, 1889 |
| BstKTI | GATC | 5 cut(s) | 91, 424, 1273, 1471, 1851 |
| BstMAI | GTCTC | 4 cut(s) | 620, 833, 1046, 1667 |
| BstMBI | GATC | 5 cut(s) | 88, 421, 1270, 1468, 1848 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstNI | CCWGG | 1 cut(s) | 63 |
| BstNSI | RCATGY | 1 cut(s) | 1952 |
| BstSCI | CCNGG | 1 cut(s) | 61 |
| BstSNI | TACGTA | 1 cut(s) | 1843 |
| BstV1I | GCAGC | 1 cut(s) | 986 |
| BstV2I | GAAGAC | 2 cut(s) | 1323, 1551 |
| BstX2I | RGATCY | 1 cut(s) | 1270 |
| BstYI | RGATCY | 1 cut(s) | 1270 |
| BstZ17I | GTATAC | 1 cut(s) | 717 |
| BsuI | GTATCC | 1 cut(s) | 922 |
| BsuRI | GGCC | 1 cut(s) | 160 |
| BtsCI | GGATG | 5 cut(s) | 91, 791, 1346, 1697, 1889 |
| BtsI | GCAGTG | 1 cut(s) | 1412 |
| BtsIMutI | CAGTG | 7 cut(s) | 168, 692, 905, 1118, 1303, 1412, 1739 |
| Csp6I | GTAC | 9 cut(s) | 180, 374, 734, 947, 1160, 1421, 1781, 1964, 1988 |
| CviAII | CATG | 6 cut(s) | 5, 668, 881, 1094, 1715, 1949 |
| CviQI | GTAC | 9 cut(s) | 180, 374, 734, 947, 1160, 1421, 1781, 1964, 1988 |
| DpnI | GATC | 5 cut(s) | 90, 423, 1272, 1470, 1850 |
| DpnII | GATC | 5 cut(s) | 88, 421, 1270, 1468, 1848 |
| DraI | TTTAAA | 3 cut(s) | 303, 1350, 1893 |
| Eam1104I | CTCTTC | 8 cut(s) | 477, 597, 810, 849, 1023, 1062, 1644, 1683 |
| EarI | CTCTTC | 8 cut(s) | 477, 597, 810, 849, 1023, 1062, 1644, 1683 |
| Ecl136II | GAGCTC | 2 cut(s) | 238, 1306 |
| Eco105I | TACGTA | 1 cut(s) | 1843 |
| Eco130I | CCWWGG | 6 cut(s) | 555, 596, 809, 1022, 1643, 1983 |
| Eco24I | GRGCYC | 2 cut(s) | 240, 1308 |
| Eco32I | GATATC | 5 cut(s) | 175, 690, 903, 1116, 1737 |
| Eco53kI | GAGCTC | 2 cut(s) | 238, 1306 |
| Eco57I | CTGAAG | 2 cut(s) | 150, 1279 |
| EcoICRI | GAGCTC | 2 cut(s) | 238, 1306 |
| EcoRI | GAATTC | 1 cut(s) | 1700 |
| EcoRII | CCWGG | 1 cut(s) | 61 |
| EcoRV | GATATC | 5 cut(s) | 175, 690, 903, 1116, 1737 |
| EcoT14I | CCWWGG | 6 cut(s) | 555, 596, 809, 1022, 1643, 1983 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 1950 |
| EcoT38I | GRGCYC | 2 cut(s) | 240, 1308 |
| ErhI | CCWWGG | 6 cut(s) | 555, 596, 809, 1022, 1643, 1983 |
| FaeI | CATG | 6 cut(s) | 8, 671, 884, 1097, 1718, 1952 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 751, 783, 964, 996, 1277, 1309, 1585, 1617 |
| FaqI | GGGAC | 3 cut(s) | 374, 455, 1502 |
| FatI | CATG | 6 cut(s) | 4, 667, 880, 1093, 1714, 1948 |
| FblI | GTMKAC | 1 cut(s) | 716 |
| Fnu4HI | GCNGC | 1 cut(s) | 1000 |
| FokI | GGATG | 5 cut(s) | 98, 798, 1353, 1704, 1896 |
| FriOI | GRGCYC | 2 cut(s) | 240, 1308 |
| Fsp4HI | GCNGC | 1 cut(s) | 1000 |
| FspBI | CTAG | 3 cut(s) | 341, 1388, 1931 |
| GluI | GCNGC | 1 cut(s) | 1000 |
| HaeIII | GGCC | 1 cut(s) | 160 |
| HapII | CCGG | 2 cut(s) | 455, 1502 |
| Hin1II | CATG | 6 cut(s) | 8, 671, 884, 1097, 1718, 1952 |
| HindIII | AAGCTT | 2 cut(s) | 581, 1628 |
| HinfI | GANTC | 8 cut(s) | 468, 520, 841, 1054, 1186, 1567, 1675, 1807 |
| HpaII | CCGG | 2 cut(s) | 455, 1502 |
| HphI | GGTGA | 9 cut(s) | 50, 444, 515, 571, 784, 997, 1491, 1562, 1618 |
| Hpy166II | GTNNAC | 5 cut(s) | 562, 717, 775, 988, 1609 |
| Hpy188I | TCNGA | 2 cut(s) | 43, 659 |
| Hpy188III | TCNNGA | 9 cut(s) | 17, 92, 123, 332, 479, 517, 1526, 1564, 1922 |
| Hpy8I | GTNNAC | 5 cut(s) | 562, 717, 775, 988, 1609 |
| HpyAV | CCTTC | 6 cut(s) | 134, 537, 750, 963, 1331, 1797 |
| HpyCH4III | ACNGT | 2 cut(s) | 860, 1073 |
| HpyCH4IV | ACGT | 2 cut(s) | 154, 1842 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpySE526I | ACGT | 2 cut(s) | 154, 1842 |
| Hsp92II | CATG | 6 cut(s) | 8, 671, 884, 1097, 1718, 1952 |
| Kzo9I | GATC | 5 cut(s) | 88, 421, 1270, 1468, 1848 |
| Lsp1109I | GCAGC | 1 cut(s) | 986 |
| LweI | GCATC | 6 cut(s) | 776, 1331, 1392, 1842, 1874, 1935 |
| MaeI | CTAG | 3 cut(s) | 341, 1388, 1931 |
| MaeII | ACGT | 2 cut(s) | 154, 1842 |
| MaeIII | GTNAC | 3 cut(s) | 56, 437, 1239 |
| MalI | GATC | 5 cut(s) | 90, 423, 1272, 1470, 1850 |
| MboI | GATC | 5 cut(s) | 88, 421, 1270, 1468, 1848 |
| MflI | RGATCY | 1 cut(s) | 1270 |
| MhlI | GDGCHC | 2 cut(s) | 240, 1308 |
| MluCI | AATT | 8 cut(s) | 611, 653, 866, 1037, 1079, 1265, 1425, 1700 |
| MlyI | GAGTC | 4 cut(s) | 477, 835, 1048, 1669 |
| MmeI | TCCRAC | 1 cut(s) | 1856 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 1950 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1221 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1296 |
| MspA1I | CMGCKG | 1 cut(s) | 429 |
| MspI | CCGG | 2 cut(s) | 455, 1502 |
| MspR9I | CCNGG | 1 cut(s) | 63 |
| Mva1269I | GAATGC | 2 cut(s) | 299, 798 |
| MvaI | CCWGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NdeII | GATC | 5 cut(s) | 88, 421, 1270, 1468, 1848 |
| NlaIII | CATG | 6 cut(s) | 8, 671, 884, 1097, 1718, 1952 |
| NlaIV | GGNNCC | 4 cut(s) | 391, 433, 1438, 1981 |
| NmuCI | GTSAC | 2 cut(s) | 56, 437 |
| NsiI | ATGCAT | 2 cut(s) | 6, 1950 |
| NspI | RCATGY | 1 cut(s) | 1952 |
| OliI | CACNNNNGTG | 1 cut(s) | 1296 |
| PctI | GAATGC | 2 cut(s) | 299, 798 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1221 |
| PfeI | GAWTC | 4 cut(s) | 520, 1186, 1567, 1807 |
| PkrI | GCNGC | 1 cut(s) | 1001 |
| PleI | GAGTC | 4 cut(s) | 476, 835, 1048, 1669 |
| PpsI | GAGTC | 4 cut(s) | 476, 835, 1048, 1669 |
| Ppu21I | YACGTR | 1 cut(s) | 1843 |
| PsiI | TTATAA | 1 cut(s) | 651 |
| Psp124BI | GAGCTC | 2 cut(s) | 240, 1308 |
| Psp6I | CCWGG | 1 cut(s) | 61 |
| PspGI | CCWGG | 1 cut(s) | 61 |
| PspN4I | GGNNCC | 4 cut(s) | 391, 433, 1438, 1981 |
| PsuI | RGATCY | 1 cut(s) | 1270 |
| RsaI | GTAC | 9 cut(s) | 181, 375, 735, 948, 1161, 1422, 1782, 1965, 1989 |
| RsaNI | GTAC | 9 cut(s) | 180, 374, 734, 947, 1160, 1421, 1781, 1964, 1988 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1296 |
| SacI | GAGCTC | 2 cut(s) | 240, 1308 |
| SatI | GCNGC | 1 cut(s) | 1000 |
| Sau3AI | GATC | 5 cut(s) | 88, 421, 1270, 1468, 1848 |
| SchI | GAGTC | 4 cut(s) | 477, 835, 1048, 1669 |
| ScrFI | CCNGG | 1 cut(s) | 63 |
| SduI | GDGCHC | 2 cut(s) | 240, 1308 |
| SfaNI | GCATC | 6 cut(s) | 776, 1331, 1392, 1842, 1874, 1935 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1296 |
| SnaBI | TACGTA | 1 cut(s) | 1843 |
| SpeI | ACTAGT | 3 cut(s) | 340, 1387, 1930 |
| Sse9I | AATT | 8 cut(s) | 611, 653, 866, 1037, 1079, 1265, 1425, 1700 |
| SsiI | CCGC | 2 cut(s) | 429, 1831 |
| SspMI | CTAG | 3 cut(s) | 341, 1388, 1931 |
| SstI | GAGCTC | 2 cut(s) | 240, 1308 |
| StyD4I | CCNGG | 1 cut(s) | 61 |
| StyI | CCWWGG | 6 cut(s) | 555, 596, 809, 1022, 1643, 1983 |
| TaaI | ACNGT | 2 cut(s) | 860, 1073 |
| TaiI | ACGT | 2 cut(s) | 157, 1845 |
| TaqI | TCGA | 5 cut(s) | 16, 91, 516, 1563, 1661 |
| TasI | AATT | 8 cut(s) | 611, 653, 866, 1037, 1079, 1265, 1425, 1700 |
| TatI | WGTACW | 1 cut(s) | 179 |
| TfiI | GAWTC | 4 cut(s) | 520, 1186, 1567, 1807 |
| TscAI | CASTG | 7 cut(s) | 175, 699, 912, 1125, 1303, 1412, 1746 |
| TseFI | GTSAC | 2 cut(s) | 56, 437 |
| TseI | GCWGC | 1 cut(s) | 999 |
| Tsp45I | GTSAC | 2 cut(s) | 56, 437 |
| TspDTI | ATGAA | 5 cut(s) | 215, 859, 1072, 1214, 1693 |
| TspRI | CASTG | 7 cut(s) | 175, 699, 912, 1125, 1303, 1412, 1746 |
| XapI | RAATTY | 5 cut(s) | 653, 866, 1079, 1425, 1700 |
| XceI | RCATGY | 1 cut(s) | 1952 |
| XmiI | GTMKAC | 1 cut(s) | 716 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1221 |
| XspI | CTAG | 3 cut(s) | 341, 1388, 1931 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 1950 |