Prupe.1G539800_v2.0.a1

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
44104048 .. 44108833
4786 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G539800.1

Sequence Viewer

Length: 1782 bp
ATGCAACCAATGCGTACCAGAAAAACCGATGAAGCCTCCTCTTCATCCTCATCATCCTCCTCCTCAAAACGTTGGAGGTACGACGTGTTCATAAGCTTTAGAGGCGAAGACACACGCAAAAACTTCACAGGCCACCTCTACGTGGCACTAAAAGAGGCTGGAATCAACACGTTTATTGATGATGATGAGTTAAGAAGAGGGGAAGATATAGGAGCCGAACTTGTGCGGGCAATCCAAGGGTCTAGGATCTCTGTCATCATCTTCTCCAGCCGGTATGCGGATTCTGGATGGTGTCTTGAGGAGCTGGTTAAGATCATGGAGTGTAAAAGAACACTTGGGCAAATAGTTTTGCCAATATTCTATGATGTTGATCCCTCAGATGTCAGGAAACAGACTGGTAGTTTTGCACAATCATTTCATAAACACAGAGATACAGATCATAATAAGGTACAGAGGTGGAGAGCTGCTCTTCATGAAGCTGCAAATTTATCTGGCTGGGATCTTAGAAACACTCTGGATGGGCATGAAGCAAATTTTATAAGGAATATCATTAAGGAGATCACTAGACGATTTAACAACACCTACTTACATGTAGCCCCCTACCAAGTTGGAATAGATTTTCGCGTGCAAGCTATCAGTGAATGTTTGGGCGTTGGATTCGATGATGTTCGCATAATAGGAATTTCTGGTATGGGCGGAATGGGTAAAACAACAGTTGCAAAAGCCATATATAACGAATTTTACGATAGGTTTGATGGTAAAAGTTTCCTTGAAAGGGTGAGGGAAAAGCAACTGGTTGGCCTGCAAAAACAACTTCTTTCTGATATCTTGAAACCAACCAAGATAAAGGTAAGTAGTGTTGCTGAAGGGATCAATGTGATAGGAAAAAGGCTTGGAAGCTTAAAGGTACTTCTCATAGTTGACGATATAGATAGTGTGGAGCAGCTAGATGCTTTAGCTATAAAACATGACACCTTTGGTCAAGGGAGTAGAATTATTATAACAACAAGAGATGAACATTTGCTAAATACACTTGAAGTTGACCAGATATATCGAGTGCAACCAATGGAAGAAGAAGAAGCTCTTGAGCTACTTAGCTGGCATGCCTTTAAAAATGGTTCTCCTAATCAAGGATATTTCAAGCTCGCAAGAGAAGTTGTTGATTACTGTGGAGGATTGCCACTGGCTCTTCAAGTTTTAGGTTGTTTTTTGGGTACAAGAAGCATAGGAGAATGGGAAAGTACATTGGGTAAATTGGAAAAAATTCCTTGTCATGAAATTCATAATCAGCTCAAAATAAGCTATGATGGGCTAAGTGATGACTACGAGAGGGATATATTCCGTGATATAGCTTGTTTCTTTATTGGAATGGACAAAAACTATGTCACACAAATATTGGATGGTTGTGGCTTTTTTGCGGAAATAGGAATCAAGGTCCTGCTTGAACGTTGCCTTGTATTCGTTGATGAAAAAAACAAGTTGATGATGCATGATTTGCTTCGAGACATGGGCAGAGAAATCGAGCGTGCAGAGTCTCCTAAGTATCCTGGAAAACGGAGTAGATTGTGGCATCCTGAAGATGTAAAATCAGTATTGATAAACAAATCTGGAACTGAAGAAATTGAAGGACTTGCTTTAAATTTGCCAAGTATTGAAGAGACTAGTTTCAGTACAGAAGCATTTACAAATATGAAGCGACTGAGATTGCTCAAACTCAACTACGTGCAGCTCACTGGAGAATACAAATATCTTTCCAAAAATTTGAGATGGCTCTGCTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

594

Amino Acids

67.74

Weight (kDa)

6.32

Isoelectric Point (pI)

45.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 539, 1001
AccII CGCG 1 cut(s) 624
AciI CCGC 4 cut(s) 226, 278, 696, 1418
AclI AACGTT 2 cut(s) 70, 1447
AclWI GGATC 4 cut(s) 254, 365, 507, 878
AcsI RAATTY 8 cut(s) 484, 532, 681, 737, 1263, 1278, 1639, 1759
AcuI CTGAAG 3 cut(s) 885, 1596, 1635
AfaI GTAC 7 cut(s) 16, 80, 450, 909, 1216, 1243, 1672
AfiI CCNNNNNNNGG 4 cut(s) 142, 277, 775, 1130
AflIII ACRYGT 3 cut(s) 84, 168, 589
AgsI TTSAA 8 cut(s) 773, 832, 1037, 1141, 1193, 1445, 1625, 1655
AhlI ACTAGT 1 cut(s) 1661
AjiI CACGTC 1 cut(s) 85
AjnI CCWGG 1 cut(s) 1546
Alw26I GTCTC 3 cut(s) 1497, 1539, 1652
AlwI GGATC 4 cut(s) 254, 365, 507, 878
AoxI GGCC 2 cut(s) 130, 799
ApeKI GCWGC 4 cut(s) 464, 479, 943, 1726
ApoI RAATTY 8 cut(s) 484, 532, 681, 737, 1263, 1278, 1639, 1759
ArsI GACNNNNNNTTYG 2 cut(s) 1368, 1400
Asp700I GAANNNNTTC 1 cut(s) 1263
AspS9I GGNCC 1 cut(s) 1435
AsuHPI GGTGA 1 cut(s) 790
AvaII GGWCC 1 cut(s) 1435
BaeI ACNNNNGTAYC 2 cut(s) 440, 473
BbsI GAAGAC 1 cut(s) 114
BbvI GCAGC 4 cut(s) 451, 466, 955, 1738
BccI CCATC 6 cut(s) 282, 512, 749, 1301, 1394, 1761
BcgI CGANNNNNNTGC 2 cut(s) 1501, 1535
BciT130I CCWGG 1 cut(s) 1548
BciVI GTATCC 1 cut(s) 1554
BcoDI GTCTC 3 cut(s) 1497, 1539, 1652
BcuI ACTAGT 1 cut(s) 1661
BfaI CTAG 4 cut(s) 243, 564, 947, 1662
BfuI GTATCC 1 cut(s) 1554
BisI GCNGC 4 cut(s) 465, 480, 944, 1727
BlsI GCNGC 4 cut(s) 466, 481, 945, 1728
Bme1390I CCNGG 1 cut(s) 1548
Bme18I GGWCC 1 cut(s) 1435
BmgBI CACGTC 1 cut(s) 85
BmgT120I GGNCC 1 cut(s) 1435
BmiI GGNNCC 1 cut(s) 214
BmrFI CCNGG 1 cut(s) 1548
BmsI GCATC 3 cut(s) 940, 1476, 1579
BpiI GAAGAC 1 cut(s) 114
BplI GAGNNNNNCTC 2 cut(s) 451, 483
BpmI CTGGAG 2 cut(s) 250, 1755
BpuEI CTTGAG 2 cut(s) 317, 1106
BsaAI YACGTR 2 cut(s) 142, 1723
BsaBI GATNNNNATC 2 cut(s) 369, 435
BsaJI CCNNGG 1 cut(s) 235
Bsc4I CCNNNNNNNGG 4 cut(s) 142, 277, 775, 1130
Bse118I RCCGGY 1 cut(s) 270
Bse1I ACTGG 4 cut(s) 400, 798, 1188, 1738
Bse8I GATNNNNATC 2 cut(s) 369, 435
BseBI CCWGG 1 cut(s) 1548
BseDI CCNNGG 1 cut(s) 235
BseGI GGATG 6 cut(s) 44, 53, 293, 523, 1405, 1570
BseJI GATNNNNATC 2 cut(s) 369, 435
BseLI CCNNNNNNNGG 4 cut(s) 142, 277, 775, 1130
BseMII CTCAG 2 cut(s) 390, 1691
BseNI ACTGG 4 cut(s) 400, 798, 1188, 1738
BseRI GAGGAG 4 cut(s) 28, 49, 52, 314
BseXI GCAGC 4 cut(s) 451, 466, 955, 1738
BseYI CCCAGC 1 cut(s) 495
BsgI GTGCAG 2 cut(s) 1548, 1745
Bsh1236I CGCG 1 cut(s) 624
BshFI GGCC 2 cut(s) 132, 801
BsiSI CCGG 1 cut(s) 271
BslI CCNNNNNNNGG 4 cut(s) 142, 277, 775, 1130
BsmAI GTCTC 3 cut(s) 1497, 1539, 1652
BsnI GGCC 2 cut(s) 132, 801
Bsp143I GATC 7 cut(s) 246, 312, 370, 436, 499, 558, 870
BspACI CCGC 4 cut(s) 226, 278, 696, 1418
BspANI GGCC 2 cut(s) 132, 801
BspCNI CTCAG 2 cut(s) 389, 1692
BspFNI CGCG 1 cut(s) 624
BspHI TCATGA 2 cut(s) 472, 1273
BspLI GGNNCC 1 cut(s) 214
BspPI GGATC 4 cut(s) 254, 365, 507, 878
BspQI GCTCTTC 2 cut(s) 474, 1194
BsrFI RCCGGY 1 cut(s) 270
BsrI ACTGG 4 cut(s) 400, 798, 1188, 1738
BssAI RCCGGY 1 cut(s) 270
BssECI CCNNGG 1 cut(s) 235
BssMI GATC 7 cut(s) 246, 312, 370, 436, 499, 558, 870
BssT1I CCWWGG 1 cut(s) 235
Bst2UI CCWGG 1 cut(s) 1548
Bst4CI ACNGT 2 cut(s) 715, 1169
Bst6I CTCTTC 5 cut(s) 46, 190, 474, 1194, 1650
BstAPI GCANNNNNTGC 2 cut(s) 10, 1495
BstBAI YACGTR 2 cut(s) 142, 1723
BstC8I GCNNGC 8 cut(s) 228, 626, 630, 803, 1100, 1104, 1146, 1527
BstDEI CTNAG 6 cut(s) 376, 503, 1094, 1313, 1539, 1700
BstENI CCTNNNNNAGG 1 cut(s) 1128
BstF5I GGATG 6 cut(s) 44, 53, 293, 523, 1405, 1570
BstFNI CGCG 1 cut(s) 624
BstKTI GATC 7 cut(s) 249, 315, 373, 439, 502, 561, 873
BstMAI GTCTC 3 cut(s) 1497, 1539, 1652
BstMBI GATC 7 cut(s) 246, 312, 370, 436, 499, 558, 870
BstMWI GCNNNNNNNGC 3 cut(s) 10, 102, 1495
BstNI CCWGG 1 cut(s) 1548
BstNSI RCATGY 2 cut(s) 593, 1106
BstSCI CCNGG 1 cut(s) 1546
BstUI CGCG 1 cut(s) 624
BstV1I GCAGC 4 cut(s) 451, 466, 955, 1738
BstV2I GAAGAC 1 cut(s) 114
BstX2I RGATCY 2 cut(s) 246, 499
BstYI RGATCY 2 cut(s) 246, 499
BsuI GTATCC 1 cut(s) 1554
BsuRI GGCC 2 cut(s) 132, 801
BtrI CACGTC 1 cut(s) 85
BtsCI GGATG 6 cut(s) 44, 53, 293, 523, 1405, 1570
BtsIMutI CAGTG 3 cut(s) 643, 1181, 1731
Cac8I GCNNGC 8 cut(s) 228, 626, 630, 803, 1100, 1104, 1146, 1527
CciI TCATGA 2 cut(s) 472, 1273
Cfr10I RCCGGY 1 cut(s) 270
Cfr13I GGNCC 1 cut(s) 1435
Csp6I GTAC 7 cut(s) 15, 79, 449, 908, 1215, 1242, 1671
CviAII CATG 9 cut(s) 316, 473, 524, 590, 968, 1103, 1274, 1490, 1507
CviQI GTAC 7 cut(s) 15, 79, 449, 908, 1215, 1242, 1671
DdeI CTNAG 6 cut(s) 376, 503, 1094, 1313, 1539, 1700
DpnI GATC 7 cut(s) 248, 314, 372, 438, 501, 560, 872
DpnII GATC 7 cut(s) 246, 312, 370, 436, 499, 558, 870
DraI TTTAAA 2 cut(s) 1111, 1638
Eam1104I CTCTTC 5 cut(s) 46, 190, 474, 1194, 1650
EarI CTCTTC 5 cut(s) 46, 190, 474, 1194, 1650
EciI GGCGGA 1 cut(s) 711
Eco130I CCWWGG 1 cut(s) 235
Eco32I GATATC 1 cut(s) 826
Eco47I GGWCC 1 cut(s) 1435
Eco57I CTGAAG 3 cut(s) 885, 1596, 1635
EcoNI CCTNNNNNAGG 1 cut(s) 1128
EcoO109I RGGNCCY 1 cut(s) 1435
EcoRII CCWGG 1 cut(s) 1546
EcoRV GATATC 1 cut(s) 826
EcoT14I CCWWGG 1 cut(s) 235
EcoT22I ATGCAT 1 cut(s) 1491
ErhI CCWWGG 1 cut(s) 235
FaeI CATG 9 cut(s) 319, 476, 527, 593, 971, 1106, 1277, 1493, 1510
FalI AAGNNNNNCTT 2 cut(s) 1068, 1100
FatI CATG 9 cut(s) 315, 472, 523, 589, 967, 1102, 1273, 1489, 1506
FauI CCCGC 1 cut(s) 219
Fnu4HI GCNGC 4 cut(s) 465, 480, 944, 1727
FokI GGATG 6 cut(s) 31, 40, 300, 530, 1412, 1557
Fsp4HI GCNGC 4 cut(s) 465, 480, 944, 1727
FspBI CTAG 4 cut(s) 243, 564, 947, 1662
GluI GCNGC 4 cut(s) 465, 480, 944, 1727
GsaI CCCAGC 1 cut(s) 499
GsuI CTGGAG 2 cut(s) 250, 1755
HaeIII GGCC 2 cut(s) 132, 801
HapII CCGG 1 cut(s) 271
Hin1II CATG 9 cut(s) 319, 476, 527, 593, 971, 1106, 1277, 1493, 1510
HincII GTYRAC 2 cut(s) 922, 1042
HindII GTYRAC 2 cut(s) 922, 1042
HindIII AAGCTT 2 cut(s) 94, 898
HinfI GANTC 5 cut(s) 162, 281, 657, 1428, 1532
HpaII CCGG 1 cut(s) 271
HphI GGTGA 1 cut(s) 790
Hpy166II GTNNAC 2 cut(s) 922, 1042
Hpy188I TCNGA 2 cut(s) 379, 823
Hpy8I GTNNAC 2 cut(s) 922, 1042
Hpy99I CGWCG 1 cut(s) 86
HpyAV CCTTC 2 cut(s) 860, 1619
HpyCH4III ACNGT 2 cut(s) 715, 1169
HpyCH4IV ACGT 6 cut(s) 70, 84, 141, 170, 1447, 1722
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 102, 1495
HpyF3I CTNAG 6 cut(s) 376, 503, 1094, 1313, 1539, 1700
HpySE526I ACGT 6 cut(s) 70, 84, 141, 170, 1447, 1722
Hsp92II CATG 9 cut(s) 319, 476, 527, 593, 971, 1106, 1277, 1493, 1510
Kzo9I GATC 7 cut(s) 246, 312, 370, 436, 499, 558, 870
LguI GCTCTTC 2 cut(s) 474, 1194
LmnI GCTCC 3 cut(s) 212, 301, 940
Lsp1109I GCAGC 4 cut(s) 451, 466, 955, 1738
LweI GCATC 3 cut(s) 940, 1476, 1579
MaeI CTAG 4 cut(s) 243, 564, 947, 1662
MaeII ACGT 6 cut(s) 70, 84, 141, 170, 1447, 1722
MaeIII GTNAC 1 cut(s) 1384
MalI GATC 7 cut(s) 248, 314, 372, 438, 501, 560, 872
MboI GATC 7 cut(s) 246, 312, 370, 436, 499, 558, 870
MflI RGATCY 2 cut(s) 246, 499
MlyI GAGTC 1 cut(s) 1541
MmeI TCCRAC 3 cut(s) 53, 589, 634
Mph1103I ATGCAT 1 cut(s) 1491
MroXI GAANNNNTTC 1 cut(s) 1263
MseI TTAA 7 cut(s) 191, 309, 552, 573, 902, 1110, 1637
MspI CCGG 1 cut(s) 271
MspR9I CCNGG 1 cut(s) 1548
MvaI CCWGG 1 cut(s) 1548
MvnI CGCG 1 cut(s) 624
MwoI GCNNNNNNNGC 3 cut(s) 10, 102, 1495
NdeII GATC 7 cut(s) 246, 312, 370, 436, 499, 558, 870
NlaIII CATG 9 cut(s) 319, 476, 527, 593, 971, 1106, 1277, 1493, 1510
NlaIV GGNNCC 1 cut(s) 214
NmuCI GTSAC 1 cut(s) 1384
NsiI ATGCAT 1 cut(s) 1491
NspI RCATGY 2 cut(s) 593, 1106
PaeI GCATGC 1 cut(s) 1106
PagI TCATGA 2 cut(s) 472, 1273
PciI ACATGT 1 cut(s) 589
PciSI GCTCTTC 2 cut(s) 474, 1194
PcsI WCGNNNNNNNCGW 1 cut(s) 741
PdmI GAANNNNTTC 1 cut(s) 1263
PfeI GAWTC 4 cut(s) 162, 281, 657, 1428
PfoI TCCNGGA 1 cut(s) 1546
PkrI GCNGC 4 cut(s) 466, 481, 945, 1728
PleI GAGTC 1 cut(s) 1540
PpsI GAGTC 1 cut(s) 1540
Ppu21I YACGTR 2 cut(s) 142, 1723
PpuMI RGGWCCY 1 cut(s) 1435
PscI ACATGT 1 cut(s) 589
PsiI TTATAA 2 cut(s) 539, 1001
Psp1406I AACGTT 2 cut(s) 70, 1447
Psp5II RGGWCCY 1 cut(s) 1435
Psp6I CCWGG 1 cut(s) 1546
PspFI CCCAGC 1 cut(s) 495
PspGI CCWGG 1 cut(s) 1546
PspN4I GGNNCC 1 cut(s) 214
PspPI GGNCC 1 cut(s) 1435
PspPPI RGGWCCY 1 cut(s) 1435
PsrI GAACNNNNNNTAC 2 cut(s) 71, 103
PsuI RGATCY 2 cut(s) 246, 499
RsaI GTAC 7 cut(s) 16, 80, 450, 909, 1216, 1243, 1672
RsaNI GTAC 7 cut(s) 15, 79, 449, 908, 1215, 1242, 1671
SapI GCTCTTC 2 cut(s) 474, 1194
SaqAI TTAA 7 cut(s) 191, 309, 552, 573, 902, 1110, 1637
SatI GCNGC 4 cut(s) 465, 480, 944, 1727
Sau3AI GATC 7 cut(s) 246, 312, 370, 436, 499, 558, 870
Sau96I GGNCC 1 cut(s) 1435
SchI GAGTC 1 cut(s) 1541
ScrFI CCNGG 1 cut(s) 1548
SfaNI GCATC 3 cut(s) 940, 1476, 1579
SinI GGWCC 1 cut(s) 1435
SmlI CTYRAG 2 cut(s) 296, 1085
SmoI CTYRAG 2 cut(s) 296, 1085
SpeI ACTAGT 1 cut(s) 1661
SphI GCATGC 1 cut(s) 1106
SsiI CCGC 4 cut(s) 226, 278, 696, 1418
SspI AATATT 2 cut(s) 357, 1395
SspMI CTAG 4 cut(s) 243, 564, 947, 1662
StyD4I CCNGG 1 cut(s) 1546
StyI CCWWGG 1 cut(s) 235
TaaI ACNGT 2 cut(s) 715, 1169
TaiI ACGT 6 cut(s) 73, 87, 144, 173, 1450, 1725
TaqI TCGA 4 cut(s) 660, 1054, 1501, 1521
TatI WGTACW 2 cut(s) 1241, 1670
TfiI GAWTC 4 cut(s) 162, 281, 657, 1428
Tru1I TTAA 7 cut(s) 191, 309, 552, 573, 902, 1110, 1637
Tru9I TTAA 7 cut(s) 191, 309, 552, 573, 902, 1110, 1637
TscAI CASTG 3 cut(s) 643, 1188, 1738
TseFI GTSAC 1 cut(s) 1384
TseI GCWGC 4 cut(s) 464, 479, 943, 1726
Tsp45I GTSAC 1 cut(s) 1384
TspGWI ACGGA 2 cut(s) 1331, 1570
TspRI CASTG 3 cut(s) 643, 1188, 1738
VpaK11BI GGWCC 1 cut(s) 1435
XagI CCTNNNNNAGG 1 cut(s) 1128
XapI RAATTY 8 cut(s) 484, 532, 681, 737, 1263, 1278, 1639, 1759
XceI RCATGY 2 cut(s) 593, 1106
XmnI GAANNNNTTC 1 cut(s) 1263
XspI CTAG 4 cut(s) 243, 564, 947, 1662
Zsp2I ATGCAT 1 cut(s) 1491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.