TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 200 |
| AciI | CCGC | 3 cut(s) | 200, 283, 537 |
| AclWI | GGATC | 5 cut(s) | 27, 53, 149, 422, 564 |
| AcsI | RAATTY | 1 cut(s) | 541 |
| AcyI | GRCGYC | 1 cut(s) | 70 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 199 |
| AgeI | ACCGGT | 1 cut(s) | 452 |
| AleI | CACNNNNGTG | 1 cut(s) | 511 |
| AluBI | AGCT | 3 cut(s) | 41, 180, 521 |
| AluI | AGCT | 3 cut(s) | 41, 180, 521 |
| Alw26I | GTCTC | 1 cut(s) | 17 |
| AlwI | GGATC | 5 cut(s) | 27, 53, 149, 422, 564 |
| Ama87I | CYCGRG | 1 cut(s) | 14 |
| AoxI | GGCC | 2 cut(s) | 187, 213 |
| ApeKI | GCWGC | 2 cut(s) | 269, 521 |
| ApoI | RAATTY | 1 cut(s) | 541 |
| AsiGI | ACCGGT | 1 cut(s) | 452 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 179 |
| AspS9I | GGNCC | 1 cut(s) | 187 |
| AsuHPI | GGTGA | 1 cut(s) | 376 |
| AvaI | CYCGRG | 1 cut(s) | 14 |
| BbsI | GAAGAC | 3 cut(s) | 267, 310, 451 |
| BbvI | GCAGC | 2 cut(s) | 281, 508 |
| BccI | CCATC | 3 cut(s) | 143, 394, 569 |
| BcoDI | GTCTC | 1 cut(s) | 17 |
| BfmI | CTRYAG | 1 cut(s) | 570 |
| BisI | GCNGC | 4 cut(s) | 201, 270, 522, 537 |
| BlsI | GCNGC | 4 cut(s) | 202, 271, 523, 538 |
| BmeT110I | CYCGRG | 1 cut(s) | 14 |
| BmgT120I | GGNCC | 1 cut(s) | 187 |
| BpiI | GAAGAC | 3 cut(s) | 267, 310, 451 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 508, 540 |
| BpmI | CTGGAG | 1 cut(s) | 374 |
| BpuEI | CTTGAG | 2 cut(s) | 21, 494 |
| BsaBI | GATNNNNATC | 2 cut(s) | 50, 153 |
| BsaHI | GRCGYC | 1 cut(s) | 70 |
| BsaJI | CCNNGG | 1 cut(s) | 292 |
| BsaWI | WCCGGW | 2 cut(s) | 95, 452 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 199 |
| Bse118I | RCCGGY | 1 cut(s) | 452 |
| Bse1I | ACTGG | 1 cut(s) | 282 |
| Bse8I | GATNNNNATC | 2 cut(s) | 50, 153 |
| BseDI | CCNNGG | 1 cut(s) | 292 |
| BseJI | GATNNNNATC | 2 cut(s) | 50, 153 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 199 |
| BseMII | CTCAG | 3 cut(s) | 262, 383, 551 |
| BseNI | ACTGG | 1 cut(s) | 282 |
| BseRI | GAGGAG | 1 cut(s) | 371 |
| BseXI | GCAGC | 2 cut(s) | 281, 508 |
| BseYI | CCCAGC | 1 cut(s) | 552 |
| BsgI | GTGCAG | 1 cut(s) | 400 |
| Bsh1236I | CGCG | 1 cut(s) | 200 |
| BshFI | GGCC | 2 cut(s) | 189, 215 |
| BshTI | ACCGGT | 1 cut(s) | 452 |
| BsiHKCI | CYCGRG | 1 cut(s) | 14 |
| BsiSI | CCGG | 3 cut(s) | 96, 216, 453 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 199 |
| BsmAI | GTCTC | 1 cut(s) | 17 |
| BsmBI | CGTCTC | 1 cut(s) | 17 |
| BsmI | GAATGC | 1 cut(s) | 105 |
| BsnI | GGCC | 2 cut(s) | 189, 215 |
| BsoBI | CYCGRG | 1 cut(s) | 14 |
| Bsp143I | GATC | 6 cut(s) | 19, 45, 154, 312, 427, 556 |
| BspACI | CCGC | 3 cut(s) | 200, 283, 537 |
| BspANI | GGCC | 2 cut(s) | 189, 215 |
| BspCNI | CTCAG | 3 cut(s) | 261, 384, 552 |
| BspFNI | CGCG | 1 cut(s) | 200 |
| BspMAI | CTGCAG | 1 cut(s) | 574 |
| BspPI | GGATC | 5 cut(s) | 27, 53, 149, 422, 564 |
| BspQI | GCTCTTC | 1 cut(s) | 480 |
| BsrFI | RCCGGY | 1 cut(s) | 452 |
| BsrI | ACTGG | 1 cut(s) | 282 |
| BssAI | RCCGGY | 1 cut(s) | 452 |
| BssECI | CCNNGG | 1 cut(s) | 292 |
| BssMI | GATC | 6 cut(s) | 19, 45, 154, 312, 427, 556 |
| BssNI | GRCGYC | 1 cut(s) | 70 |
| BssT1I | CCWWGG | 1 cut(s) | 292 |
| Bst6I | CTCTTC | 3 cut(s) | 247, 320, 480 |
| BstACI | GRCGYC | 1 cut(s) | 70 |
| BstC8I | GCNNGC | 1 cut(s) | 285 |
| BstDEI | CTNAG | 3 cut(s) | 248, 392, 560 |
| BstFNI | CGCG | 1 cut(s) | 200 |
| BstKTI | GATC | 6 cut(s) | 22, 48, 157, 315, 430, 559 |
| BstMAI | GTCTC | 1 cut(s) | 17 |
| BstMBI | GATC | 6 cut(s) | 19, 45, 154, 312, 427, 556 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 137, 186 |
| BstNSI | RCATGY | 1 cut(s) | 144 |
| BstSFI | CTRYAG | 1 cut(s) | 570 |
| BstUI | CGCG | 1 cut(s) | 200 |
| BstV1I | GCAGC | 2 cut(s) | 281, 508 |
| BstV2I | GAAGAC | 3 cut(s) | 267, 310, 451 |
| BstX2I | RGATCY | 4 cut(s) | 19, 45, 154, 556 |
| BstYI | RGATCY | 4 cut(s) | 19, 45, 154, 556 |
| BsuRI | GGCC | 2 cut(s) | 189, 215 |
| BtgZI | GCGATG | 1 cut(s) | 162 |
| BtsI | GCAGTG | 1 cut(s) | 567 |
| BtsIMutI | CAGTG | 4 cut(s) | 170, 203, 389, 567 |
| Cac8I | GCNNGC | 1 cut(s) | 285 |
| Cfr10I | RCCGGY | 1 cut(s) | 452 |
| Cfr13I | GGNCC | 1 cut(s) | 187 |
| CseI | GACGC | 1 cut(s) | 59 |
| CspAI | ACCGGT | 1 cut(s) | 452 |
| CviAII | CATG | 2 cut(s) | 141, 482 |
| DdeI | CTNAG | 3 cut(s) | 248, 392, 560 |
| DpnI | GATC | 6 cut(s) | 21, 47, 156, 314, 429, 558 |
| DpnII | GATC | 6 cut(s) | 19, 45, 154, 312, 427, 556 |
| Eam1104I | CTCTTC | 3 cut(s) | 247, 320, 480 |
| EarI | CTCTTC | 3 cut(s) | 247, 320, 480 |
| Eco130I | CCWWGG | 1 cut(s) | 292 |
| Eco88I | CYCGRG | 1 cut(s) | 14 |
| EcoT14I | CCWWGG | 1 cut(s) | 292 |
| ErhI | CCWWGG | 1 cut(s) | 292 |
| Esp3I | CGTCTC | 1 cut(s) | 17 |
| FaeI | CATG | 2 cut(s) | 144, 485 |
| FaiI | YATR | 8 cut(s) | 66, 142, 266, 333, 374, 483, 495, 497 |
| FatI | CATG | 2 cut(s) | 140, 481 |
| FauI | CCCGC | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 4 cut(s) | 201, 270, 522, 537 |
| Fsp4HI | GCNGC | 4 cut(s) | 201, 270, 522, 537 |
| GluI | GCNGC | 4 cut(s) | 201, 270, 522, 537 |
| GsaI | CCCAGC | 1 cut(s) | 556 |
| GsuI | CTGGAG | 1 cut(s) | 374 |
| HaeIII | GGCC | 2 cut(s) | 189, 215 |
| HapII | CCGG | 3 cut(s) | 96, 216, 453 |
| HgaI | GACGC | 1 cut(s) | 59 |
| Hin1I | GRCGYC | 1 cut(s) | 70 |
| Hin1II | CATG | 2 cut(s) | 144, 485 |
| HincII | GTYRAC | 1 cut(s) | 223 |
| HindII | GTYRAC | 1 cut(s) | 223 |
| HindIII | AAGCTT | 1 cut(s) | 39 |
| HinfI | GANTC | 4 cut(s) | 78, 219, 303, 338 |
| HpaII | CCGG | 3 cut(s) | 96, 216, 453 |
| HphI | GGTGA | 1 cut(s) | 376 |
| Hpy166II | GTNNAC | 1 cut(s) | 223 |
| Hpy188I | TCNGA | 6 cut(s) | 24, 58, 93, 251, 477, 561 |
| Hpy188III | TCNNGA | 5 cut(s) | 14, 158, 300, 322, 353 |
| Hpy8I | GTNNAC | 1 cut(s) | 223 |
| Hpy99I | CGWCG | 1 cut(s) | 75 |
| HpyAV | CCTTC | 3 cut(s) | 116, 238, 441 |
| HpyCH4IV | ACGT | 1 cut(s) | 423 |
| HpyCH4V | TGCA | 2 cut(s) | 381, 572 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 137, 186 |
| HpyF3I | CTNAG | 3 cut(s) | 248, 392, 560 |
| HpySE526I | ACGT | 1 cut(s) | 423 |
| Hsp92I | GRCGYC | 1 cut(s) | 70 |
| Hsp92II | CATG | 2 cut(s) | 144, 485 |
| Kzo9I | GATC | 6 cut(s) | 19, 45, 154, 312, 427, 556 |
| LguI | GCTCTTC | 1 cut(s) | 480 |
| LmnI | GCTCC | 1 cut(s) | 7 |
| Lsp1109I | GCAGC | 2 cut(s) | 281, 508 |
| MaeII | ACGT | 1 cut(s) | 423 |
| MaeIII | GTNAC | 1 cut(s) | 563 |
| MalI | GATC | 6 cut(s) | 21, 47, 156, 314, 429, 558 |
| MboI | GATC | 6 cut(s) | 19, 45, 154, 312, 427, 556 |
| MflI | RGATCY | 4 cut(s) | 19, 45, 154, 556 |
| MluCI | AATT | 1 cut(s) | 541 |
| MlyI | GAGTC | 2 cut(s) | 72, 228 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MnlI | CCTC | 9 cut(s) | 10, 71, 154, 203, 248, 321, 349, 387, 460 |
| MroXI | GAANNNNTTC | 1 cut(s) | 179 |
| MslI | CAYNNNNRTG | 1 cut(s) | 511 |
| MspI | CCGG | 3 cut(s) | 96, 216, 453 |
| Mva1269I | GAATGC | 1 cut(s) | 105 |
| MvnI | CGCG | 1 cut(s) | 200 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 137, 186 |
| NdeII | GATC | 6 cut(s) | 19, 45, 154, 312, 427, 556 |
| NlaIII | CATG | 2 cut(s) | 144, 485 |
| NmeAIII | GCCGAG | 1 cut(s) | 129 |
| NspI | RCATGY | 1 cut(s) | 144 |
| OliI | CACNNNNGTG | 1 cut(s) | 511 |
| PaeR7I | CTCGAG | 1 cut(s) | 14 |
| PciSI | GCTCTTC | 1 cut(s) | 480 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 123, 312 |
| PctI | GAATGC | 1 cut(s) | 105 |
| PdmI | GAANNNNTTC | 1 cut(s) | 179 |
| PfeI | GAWTC | 2 cut(s) | 303, 338 |
| PinAI | ACCGGT | 1 cut(s) | 452 |
| PkrI | GCNGC | 4 cut(s) | 202, 271, 523, 538 |
| PleI | GAGTC | 2 cut(s) | 72, 227 |
| PpsI | GAGTC | 2 cut(s) | 72, 227 |
| PspFI | CCCAGC | 1 cut(s) | 552 |
| PspPI | GGNCC | 1 cut(s) | 187 |
| PstI | CTGCAG | 1 cut(s) | 574 |
| PsuI | RGATCY | 4 cut(s) | 19, 45, 154, 556 |
| RseI | CAYNNNNRTG | 1 cut(s) | 511 |
| SapI | GCTCTTC | 1 cut(s) | 480 |
| SatI | GCNGC | 4 cut(s) | 201, 270, 522, 537 |
| Sau3AI | GATC | 6 cut(s) | 19, 45, 154, 312, 427, 556 |
| Sau96I | GGNCC | 1 cut(s) | 187 |
| SchI | GAGTC | 2 cut(s) | 72, 228 |
| SetI | ASST | 8 cut(s) | 43, 63, 88, 182, 195, 332, 426, 523 |
| SfcI | CTRYAG | 1 cut(s) | 570 |
| Sfr274I | CTCGAG | 1 cut(s) | 14 |
| SlaI | CTCGAG | 1 cut(s) | 14 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 511 |
| SmlI | CTYRAG | 3 cut(s) | 14, 36, 509 |
| SmoI | CTYRAG | 3 cut(s) | 14, 36, 509 |
| Sse9I | AATT | 1 cut(s) | 541 |
| SsiI | CCGC | 3 cut(s) | 200, 283, 537 |
| StyI | CCWWGG | 1 cut(s) | 292 |
| TaiI | ACGT | 1 cut(s) | 426 |
| TaqI | TCGA | 3 cut(s) | 15, 299, 323 |
| TasI | AATT | 1 cut(s) | 541 |
| TauI | GCSGC | 2 cut(s) | 203, 539 |
| TfiI | GAWTC | 2 cut(s) | 303, 338 |
| TscAI | CASTG | 4 cut(s) | 177, 210, 396, 574 |
| TseI | GCWGC | 2 cut(s) | 269, 521 |
| TspDTI | ATGAA | 3 cut(s) | 40, 220, 498 |
| TspRI | CASTG | 4 cut(s) | 177, 210, 396, 574 |
| XapI | RAATTY | 1 cut(s) | 541 |
| XceI | RCATGY | 1 cut(s) | 144 |
| XhoI | CTCGAG | 1 cut(s) | 14 |
| XmnI | GAANNNNTTC | 1 cut(s) | 179 |