TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 46 - 214 | 6.7e-51 | TIR domain |
| TIR_2 | PF13676 | 48 - 145 | 9.8e-17 | TIR domain |
| NB-ARC | PF00931 | 229 - 398 | 2e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 471 - 537 | 4.1e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 738 - 834 | 7.3e-12 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 793 - 917 | 6.3e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 851 - 881 | 4.2e-06 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1079, 2381 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 2254, 3260 |
| AccB1I | GGYRCC | 1 cut(s) | 2439 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3455 |
| AccI | GTMKAC | 5 cut(s) | 1008, 1041, 2258, 2410, 3426 |
| AccII | CGCG | 2 cut(s) | 172, 1584 |
| AciI | CCGC | 5 cut(s) | 283, 335, 2635, 2984, 3240 |
| AclI | AACGTT | 1 cut(s) | 1528 |
| AclWI | GGATC | 5 cut(s) | 567, 956, 1699, 2406, 2550 |
| AcoI | YGGCCR | 1 cut(s) | 1057 |
| AcuI | CTGAAG | 3 cut(s) | 139, 555, 1377 |
| AdeI | CACNNNGTG | 1 cut(s) | 3111 |
| AfaI | GTAC | 2 cut(s) | 2000, 2677 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 199, 1505, 2424, 2500, 3455, 3489 |
| AflIII | ACRYGT | 1 cut(s) | 436 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 401 |
| AhlI | ACTAGT | 1 cut(s) | 400 |
| AjnI | CCWGG | 3 cut(s) | 198, 1627, 1914 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2346, 2378 |
| Alw21I | GWGCWC | 2 cut(s) | 1803, 2885 |
| Alw26I | GTCTC | 3 cut(s) | 483, 961, 1762 |
| Alw44I | GTGCAC | 1 cut(s) | 2881 |
| AlwI | GGATC | 5 cut(s) | 567, 956, 1699, 2406, 2550 |
| Ama87I | CYCGRG | 2 cut(s) | 2039, 2393 |
| AoxI | GGCC | 5 cut(s) | 105, 187, 201, 1057, 2473 |
| ApaLI | GTGCAC | 1 cut(s) | 2881 |
| ApeKI | GCWGC | 6 cut(s) | 524, 539, 2133, 2373, 2637, 2863 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 294, 326 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 891, 2913 |
| AspLEI | GCGC | 3 cut(s) | 174, 1653, 2729 |
| AspS9I | GGNCC | 7 cut(s) | 187, 297, 1516, 1957, 2939, 2987, 3142 |
| AsuC2I | CCSGG | 2 cut(s) | 1061, 3422 |
| AsuHPI | GGTGA | 5 cut(s) | 1153, 2004, 2075, 2981, 3254 |
| AsuII | TTCGAA | 1 cut(s) | 3351 |
| AvaI | CYCGRG | 2 cut(s) | 2039, 2393 |
| AvaII | GGWCC | 6 cut(s) | 297, 1516, 1957, 2939, 2987, 3142 |
| BaeGI | GKGCMC | 1 cut(s) | 2885 |
| BanI | GGYRCC | 1 cut(s) | 2439 |
| BanII | GRGCYC | 1 cut(s) | 1803 |
| BbsI | GAAGAC | 3 cut(s) | 310, 2292, 2496 |
| Bbv12I | GWGCWC | 2 cut(s) | 1803, 2885 |
| BbvI | GCAGC | 6 cut(s) | 511, 526, 2120, 2360, 2649, 2850 |
| BccI | CCATC | 7 cut(s) | 572, 1382, 1833, 2795, 2919, 2960, 3110 |
| BceAI | ACGGC | 3 cut(s) | 1602, 2281, 2427 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 713, 747 |
| BciT130I | CCWGG | 3 cut(s) | 200, 1629, 1916 |
| BcnI | CCSGG | 2 cut(s) | 1061, 3422 |
| BcoDI | GTCTC | 3 cut(s) | 483, 961, 1762 |
| BcuI | ACTAGT | 1 cut(s) | 400 |
| BfmI | CTRYAG | 2 cut(s) | 2181, 2918 |
| BfoI | RGCGCY | 1 cut(s) | 1654 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2472 |
| BglII | AGATCT | 2 cut(s) | 2575, 2887 |
| BisI | GCNGC | 6 cut(s) | 525, 540, 2134, 2374, 2638, 2864 |
| BlsI | GCNGC | 6 cut(s) | 526, 541, 2135, 2375, 2639, 2865 |
| BmcAI | AGTACT | 1 cut(s) | 2000 |
| Bme1390I | CCNGG | 5 cut(s) | 200, 1061, 1629, 1916, 3422 |
| Bme18I | GGWCC | 6 cut(s) | 297, 1516, 1957, 2939, 2987, 3142 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 401 |
| BmeT110I | CYCGRG | 2 cut(s) | 2039, 2393 |
| BmgT120I | GGNCC | 7 cut(s) | 187, 297, 1516, 1957, 2939, 2987, 3142 |
| BmiI | GGNNCC | 6 cut(s) | 298, 1844, 1958, 2441, 2988, 3032 |
| BmrFI | CCNGG | 5 cut(s) | 200, 1061, 1629, 1916, 3422 |
| BmrI | ACTGGG | 1 cut(s) | 401 |
| BmsI | GCATC | 6 cut(s) | 202, 270, 487, 771, 1557, 1651 |
| BmuI | ACTGGG | 1 cut(s) | 401 |
| BpiI | GAAGAC | 3 cut(s) | 310, 2292, 2496 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 95, 127, 511, 543, 954, 986 |
| BpmI | CTGGAG | 3 cut(s) | 269, 1827, 3477 |
| Bpu14I | TTCGAA | 1 cut(s) | 3351 |
| BpuEI | CTTGAG | 7 cut(s) | 169, 307, 374, 1192, 1213, 2165, 2344 |
| BpuMI | CCSGG | 2 cut(s) | 1061, 3422 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2332, 2511 |
| BsaJI | CCNNGG | 8 cut(s) | 292, 1060, 1627, 1915, 2156, 2394, 2418, 2730 |
| BsaWI | WCCGGW | 1 cut(s) | 1513 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1887, 1917 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 199, 1505, 2424, 2500, 3455, 3489 |
| Bse3DI | GCAATG | 3 cut(s) | 1195, 1243, 2746 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2332, 2511 |
| BseBI | CCWGG | 3 cut(s) | 200, 1629, 1916 |
| BseDI | CCNNGG | 8 cut(s) | 292, 1060, 1627, 1915, 2156, 2394, 2418, 2730 |
| BseGI | GGATG | 9 cut(s) | 77, 116, 217, 1687, 2810, 2842, 2930, 3139, 3438 |
| BseJI | GATNNNNATC | 2 cut(s) | 2332, 2511 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 199, 1505, 2424, 2500, 3455, 3489 |
| BseMI | GCAATG | 3 cut(s) | 1195, 1243, 2746 |
| BseMII | CTCAG | 9 cut(s) | 440, 1763, 1801, 1945, 1976, 2255, 2482, 2781, 3015 |
| BseRI | GAGGAG | 4 cut(s) | 61, 100, 371, 2162 |
| BseSI | GKGCMC | 1 cut(s) | 2885 |
| BseXI | GCAGC | 6 cut(s) | 511, 526, 2120, 2360, 2649, 2850 |
| BseYI | CCCAGC | 4 cut(s) | 555, 2481, 3277, 3290 |
| BsgI | GTGCAG | 1 cut(s) | 2289 |
| Bsh1236I | CGCG | 2 cut(s) | 172, 1584 |
| BshFI | GGCC | 5 cut(s) | 107, 189, 203, 1059, 2475 |
| BshNI | GGYRCC | 1 cut(s) | 2439 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1803, 2885 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2039, 2393 |
| BsiSI | CCGG | 3 cut(s) | 1060, 1514, 3421 |
| BslFI | GGGAC | 6 cut(s) | 408, 1427, 2255, 3000, 3294, 3398 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 199, 1505, 2424, 2500, 3455, 3489 |
| BsmAI | GTCTC | 3 cut(s) | 483, 961, 1762 |
| BsmFI | GGGAC | 6 cut(s) | 408, 1427, 2255, 3000, 3294, 3398 |
| BsnI | GGCC | 5 cut(s) | 107, 189, 203, 1059, 2475 |
| BsoBI | CYCGRG | 2 cut(s) | 2039, 2393 |
| Bsp119I | TTCGAA | 1 cut(s) | 3351 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1803, 2885 |
| Bsp1407I | TGTACA | 1 cut(s) | 2675 |
| Bsp68I | TCGCGA | 1 cut(s) | 1584 |
| BspACI | CCGC | 5 cut(s) | 283, 335, 2635, 2984, 3240 |
| BspANI | GGCC | 5 cut(s) | 107, 189, 203, 1059, 2475 |
| BspCNI | CTCAG | 9 cut(s) | 441, 1764, 1800, 1944, 1977, 2256, 2481, 2780, 3016 |
| BspFNI | CGCG | 2 cut(s) | 172, 1584 |
| BspHI | TCATGA | 1 cut(s) | 1363 |
| BspLI | GGNNCC | 6 cut(s) | 298, 1844, 1958, 2441, 2988, 3032 |
| BspPI | GGATC | 5 cut(s) | 567, 956, 1699, 2406, 2550 |
| BspT104I | TTCGAA | 1 cut(s) | 3351 |
| BspT107I | GGYRCC | 1 cut(s) | 2439 |
| BsrDI | GCAATG | 3 cut(s) | 1195, 1243, 2746 |
| BsrGI | TGTACA | 1 cut(s) | 2675 |
| BssECI | CCNNGG | 8 cut(s) | 292, 1060, 1627, 1915, 2156, 2394, 2418, 2730 |
| BssT1I | CCWWGG | 3 cut(s) | 292, 2156, 2418 |
| Bst2UI | CCWGG | 3 cut(s) | 200, 1629, 1916 |
| Bst4CI | ACNGT | 2 cut(s) | 1543, 2612 |
| Bst6I | CTCTTC | 4 cut(s) | 79, 118, 1206, 1760 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1576, 2373, 2458 |
| BstAUI | TGTACA | 1 cut(s) | 2675 |
| BstBI | TTCGAA | 1 cut(s) | 3351 |
| BstC8I | GCNNGC | 5 cut(s) | 285, 553, 1182, 2059, 2459 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2422 |
| BstF5I | GGATG | 9 cut(s) | 77, 116, 217, 1687, 2810, 2842, 2930, 3139, 3438 |
| BstFNI | CGCG | 2 cut(s) | 172, 1584 |
| BstH2I | RGCGCY | 1 cut(s) | 1654 |
| BstHHI | GCGC | 3 cut(s) | 174, 1653, 2729 |
| BstMAI | GTCTC | 3 cut(s) | 483, 961, 1762 |
| BstNI | CCWGG | 3 cut(s) | 200, 1629, 1916 |
| BstNSI | RCATGY | 3 cut(s) | 440, 1184, 2980 |
| BstSCI | CCNGG | 5 cut(s) | 198, 1059, 1627, 1914, 3420 |
| BstSFI | CTRYAG | 2 cut(s) | 2181, 2918 |
| BstSLI | GKGCMC | 1 cut(s) | 2885 |
| BstUI | CGCG | 2 cut(s) | 172, 1584 |
| BstV1I | GCAGC | 6 cut(s) | 511, 526, 2120, 2360, 2649, 2850 |
| BstV2I | GAAGAC | 3 cut(s) | 310, 2292, 2496 |
| BstX2I | RGATCY | 6 cut(s) | 559, 1691, 2398, 2542, 2575, 2887 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1853, 2093 |
| BstYI | RGATCY | 6 cut(s) | 559, 1691, 2398, 2542, 2575, 2887 |
| BsuRI | GGCC | 5 cut(s) | 107, 189, 203, 1059, 2475 |
| BtgZI | GCGATG | 1 cut(s) | 705 |
| BtsCI | GGATG | 9 cut(s) | 77, 116, 217, 1687, 2810, 2842, 2930, 3139, 3438 |
| BtsI | GCAGTG | 1 cut(s) | 2892 |
| BtsIMutI | CAGTG | 6 cut(s) | 389, 1803, 1846, 2892, 3041, 3117 |
| BtuMI | TCGCGA | 1 cut(s) | 1584 |
| Cac8I | GCNNGC | 5 cut(s) | 285, 553, 1182, 2059, 2459 |
| CciI | TCATGA | 1 cut(s) | 1363 |
| CfoI | GCGC | 3 cut(s) | 174, 1653, 2729 |
| Cfr13I | GGNCC | 7 cut(s) | 187, 297, 1516, 1957, 2939, 2987, 3142 |
| CseI | GACGC | 2 cut(s) | 827, 984 |
| Csp6I | GTAC | 2 cut(s) | 1999, 2676 |
| CviQI | GTAC | 2 cut(s) | 1999, 2676 |
| DraI | TTTAAA | 1 cut(s) | 1189 |
| DraIII | CACNNNGTG | 1 cut(s) | 3111 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2254, 3260 |
| DriI | GACNNNNNGTC | 1 cut(s) | 401 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2254, 3260 |
| EaeI | YGGCCR | 1 cut(s) | 1057 |
| Eam1104I | CTCTTC | 4 cut(s) | 79, 118, 1206, 1760 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 401 |
| EarI | CTCTTC | 4 cut(s) | 79, 118, 1206, 1760 |
| Ecl136II | GAGCTC | 1 cut(s) | 1801 |
| Eco130I | CCWWGG | 3 cut(s) | 292, 2156, 2418 |
| Eco147I | AGGCCT | 2 cut(s) | 107, 2475 |
| Eco24I | GRGCYC | 1 cut(s) | 1803 |
| Eco32I | GATATC | 1 cut(s) | 904 |
| Eco47I | GGWCC | 6 cut(s) | 297, 1516, 1957, 2939, 2987, 3142 |
| Eco53kI | GAGCTC | 1 cut(s) | 1801 |
| Eco57I | CTGAAG | 3 cut(s) | 139, 555, 1377 |
| Eco88I | CYCGRG | 2 cut(s) | 2039, 2393 |
| EcoICRI | GAGCTC | 1 cut(s) | 1801 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2422 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1957, 2939, 2987 |
| EcoRI | GAATTC | 2 cut(s) | 1509, 3347 |
| EcoRII | CCWGG | 3 cut(s) | 198, 1627, 1914 |
| EcoRV | GATATC | 1 cut(s) | 904 |
| EcoT14I | CCWWGG | 3 cut(s) | 292, 2156, 2418 |
| EcoT22I | ATGCAT | 2 cut(s) | 1572, 2746 |
| EcoT38I | GRGCYC | 1 cut(s) | 1803 |
| ErhI | CCWWGG | 3 cut(s) | 292, 2156, 2418 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 876, 908, 1203, 1235, 2098, 2130, 2398, 2430 |
| FaqI | GGGAC | 6 cut(s) | 408, 1427, 2255, 3000, 3294, 3398 |
| FauI | CCCGC | 2 cut(s) | 276, 2977 |
| FauNDI | CATATG | 2 cut(s) | 1455, 3451 |
| FblI | GTMKAC | 5 cut(s) | 1008, 1041, 2258, 2410, 3426 |
| Fnu4HI | GCNGC | 6 cut(s) | 525, 540, 2134, 2374, 2638, 2864 |
| FokI | GGATG | 9 cut(s) | 64, 103, 224, 1694, 2817, 2849, 2937, 3146, 3445 |
| FriOI | GRGCYC | 1 cut(s) | 1803 |
| Fsp4HI | GCNGC | 6 cut(s) | 525, 540, 2134, 2374, 2638, 2864 |
| GlaI | GCGC | 3 cut(s) | 173, 1652, 2728 |
| GluI | GCNGC | 6 cut(s) | 525, 540, 2134, 2374, 2638, 2864 |
| GsaI | CCCAGC | 4 cut(s) | 559, 2485, 3281, 3294 |
| GsuI | CTGGAG | 3 cut(s) | 269, 1827, 3477 |
| HaeII | RGCGCY | 1 cut(s) | 1654 |
| HaeIII | GGCC | 5 cut(s) | 107, 189, 203, 1059, 2475 |
| HapII | CCGG | 3 cut(s) | 1060, 1514, 3421 |
| HgaI | GACGC | 2 cut(s) | 827, 984 |
| HhaI | GCGC | 3 cut(s) | 174, 1653, 2729 |
| Hin6I | GCGC | 3 cut(s) | 172, 1651, 2727 |
| HinP1I | GCGC | 3 cut(s) | 172, 1651, 2727 |
| HincII | GTYRAC | 2 cut(s) | 940, 1009 |
| HindII | GTYRAC | 2 cut(s) | 940, 1009 |
| HindIII | AAGCTT | 2 cut(s) | 811, 2648 |
| HpaII | CCGG | 3 cut(s) | 1060, 1514, 3421 |
| HphI | GGTGA | 5 cut(s) | 1153, 2004, 2075, 2981, 3254 |
| Hpy166II | GTNNAC | 9 cut(s) | 940, 1009, 1042, 2083, 2259, 2411, 2676, 2883, 3427 |
| Hpy8I | GTNNAC | 9 cut(s) | 940, 1009, 1042, 2083, 2259, 2411, 2676, 2883, 3427 |
| Hpy99I | CGWCG | 1 cut(s) | 995 |
| HpyCH4III | ACNGT | 2 cut(s) | 1543, 2612 |
| HpyCH4IV | ACGT | 3 cut(s) | 931, 1528, 1938 |
| HpySE526I | ACGT | 3 cut(s) | 931, 1528, 1938 |
| HspAI | GCGC | 3 cut(s) | 172, 1651, 2727 |
| LmnI | GCTCC | 5 cut(s) | 358, 1018, 1848, 2149, 2858 |
| Lsp1109I | GCAGC | 6 cut(s) | 511, 526, 2120, 2360, 2649, 2850 |
| LweI | GCATC | 6 cut(s) | 202, 270, 487, 771, 1557, 1651 |
| MaeII | ACGT | 3 cut(s) | 931, 1528, 1938 |
| MaeIII | GTNAC | 6 cut(s) | 1487, 1537, 1619, 2585, 3014, 3187 |
| MfeI | CAATTG | 1 cut(s) | 2069 |
| MflI | RGATCY | 6 cut(s) | 559, 1691, 2398, 2542, 2575, 2887 |
| MhlI | GDGCHC | 2 cut(s) | 1803, 2885 |
| MlyI | GAGTC | 6 cut(s) | 671, 963, 1043, 1161, 1704, 2560 |
| MmeI | TCCRAC | 3 cut(s) | 694, 721, 2939 |
| Mph1103I | ATGCAT | 2 cut(s) | 1572, 2746 |
| MroXI | GAANNNNTTC | 2 cut(s) | 891, 2913 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1248 |
| MspA1I | CMGCKG | 1 cut(s) | 1561 |
| MspI | CCGG | 3 cut(s) | 1060, 1514, 3421 |
| MspR9I | CCNGG | 5 cut(s) | 200, 1061, 1629, 1916, 3422 |
| MunI | CAATTG | 1 cut(s) | 2069 |
| MvaI | CCWGG | 3 cut(s) | 200, 1629, 1916 |
| MvnI | CGCG | 2 cut(s) | 172, 1584 |
| NciI | CCSGG | 2 cut(s) | 1061, 3422 |
| NdeI | CATATG | 2 cut(s) | 1455, 3451 |
| NlaIV | GGNNCC | 6 cut(s) | 298, 1844, 1958, 2441, 2988, 3032 |
| NmuCI | GTSAC | 3 cut(s) | 1487, 1619, 3014 |
| NruI | TCGCGA | 1 cut(s) | 1584 |
| NsiI | ATGCAT | 2 cut(s) | 1572, 2746 |
| NspI | RCATGY | 3 cut(s) | 440, 1184, 2980 |
| NspV | TTCGAA | 1 cut(s) | 3351 |
| PaeI | GCATGC | 1 cut(s) | 1184 |
| PaeR7I | CTCGAG | 1 cut(s) | 2039 |
| PagI | TCATGA | 1 cut(s) | 1363 |
| PceI | AGGCCT | 2 cut(s) | 107, 2475 |
| PciI | ACATGT | 1 cut(s) | 436 |
| PdmI | GAANNNNTTC | 2 cut(s) | 891, 2913 |
| PflFI | GACNNNGTC | 1 cut(s) | 1463 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3455 |
| PkrI | GCNGC | 6 cut(s) | 526, 541, 2135, 2375, 2639, 2865 |
| PleI | GAGTC | 6 cut(s) | 671, 963, 1043, 1161, 1704, 2559 |
| PpsI | GAGTC | 6 cut(s) | 671, 963, 1043, 1161, 1704, 2559 |
| PpuMI | RGGWCCY | 3 cut(s) | 1957, 2939, 2987 |
| PscI | ACATGT | 1 cut(s) | 436 |
| PsiI | TTATAA | 2 cut(s) | 1079, 2381 |
| Psp124BI | GAGCTC | 1 cut(s) | 1803 |
| Psp1406I | AACGTT | 1 cut(s) | 1528 |
| Psp5II | RGGWCCY | 3 cut(s) | 1957, 2939, 2987 |
| Psp6I | CCWGG | 3 cut(s) | 198, 1627, 1914 |
| PspFI | CCCAGC | 4 cut(s) | 555, 2481, 3277, 3290 |
| PspGI | CCWGG | 3 cut(s) | 198, 1627, 1914 |
| PspN4I | GGNNCC | 6 cut(s) | 298, 1844, 1958, 2441, 2988, 3032 |
| PspPI | GGNCC | 7 cut(s) | 187, 297, 1516, 1957, 2939, 2987, 3142 |
| PspPPI | RGGWCCY | 3 cut(s) | 1957, 2939, 2987 |
| PsuI | RGATCY | 6 cut(s) | 559, 1691, 2398, 2542, 2575, 2887 |
| PsyI | GACNNNGTC | 1 cut(s) | 1463 |
| PvuII | CAGCTG | 1 cut(s) | 1561 |
| RruI | TCGCGA | 1 cut(s) | 1584 |
| RsaI | GTAC | 2 cut(s) | 2000, 2677 |
| RsaNI | GTAC | 2 cut(s) | 1999, 2676 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1248 |
| SacI | GAGCTC | 1 cut(s) | 1803 |
| SalI | GTCGAC | 1 cut(s) | 1007 |
| SatI | GCNGC | 6 cut(s) | 525, 540, 2134, 2374, 2638, 2864 |
| Sau96I | GGNCC | 7 cut(s) | 187, 297, 1516, 1957, 2939, 2987, 3142 |
| ScaI | AGTACT | 1 cut(s) | 2000 |
| SchI | GAGTC | 6 cut(s) | 671, 963, 1043, 1161, 1704, 2560 |
| ScrFI | CCNGG | 5 cut(s) | 200, 1061, 1629, 1916, 3422 |
| SduI | GDGCHC | 2 cut(s) | 1803, 2885 |
| SfaNI | GCATC | 6 cut(s) | 202, 270, 487, 771, 1557, 1651 |
| SfcI | CTRYAG | 2 cut(s) | 2181, 2918 |
| Sfr274I | CTCGAG | 1 cut(s) | 2039 |
| SfuI | TTCGAA | 1 cut(s) | 3351 |
| SinI | GGWCC | 6 cut(s) | 297, 1516, 1957, 2939, 2987, 3142 |
| SlaI | CTCGAG | 1 cut(s) | 2039 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1248 |
| SmlI | CTYRAG | 8 cut(s) | 148, 322, 353, 1171, 1228, 2039, 2144, 2323 |
| SmoI | CTYRAG | 8 cut(s) | 148, 322, 353, 1171, 1228, 2039, 2144, 2323 |
| SpeI | ACTAGT | 1 cut(s) | 400 |
| SphI | GCATGC | 1 cut(s) | 1184 |
| SseBI | AGGCCT | 2 cut(s) | 107, 2475 |
| SsiI | CCGC | 5 cut(s) | 283, 335, 2635, 2984, 3240 |
| SspI | AATATT | 1 cut(s) | 1476 |
| SstI | GAGCTC | 1 cut(s) | 1803 |
| StuI | AGGCCT | 2 cut(s) | 107, 2475 |
| StyD4I | CCNGG | 5 cut(s) | 198, 1059, 1627, 1914, 3420 |
| StyI | CCWWGG | 3 cut(s) | 292, 2156, 2418 |
| TaaI | ACNGT | 2 cut(s) | 1543, 2612 |
| TaiI | ACGT | 3 cut(s) | 934, 1531, 1941 |
| TaqI | TCGA | 8 cut(s) | 122, 1008, 1300, 1782, 2040, 2655, 3011, 3351 |
| TatI | WGTACW | 2 cut(s) | 1998, 2675 |
| TscAI | CASTG | 6 cut(s) | 396, 1810, 1853, 2899, 3041, 3124 |
| TseFI | GTSAC | 3 cut(s) | 1487, 1619, 3014 |
| TseI | GCWGC | 6 cut(s) | 524, 539, 2133, 2373, 2637, 2863 |
| Tsp45I | GTSAC | 3 cut(s) | 1487, 1619, 3014 |
| TspGWI | ACGGA | 1 cut(s) | 1595 |
| TspRI | CASTG | 6 cut(s) | 396, 1810, 1853, 2899, 3041, 3124 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1463 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3455 |
| VneI | GTGCAC | 1 cut(s) | 2881 |
| VpaK11BI | GGWCC | 6 cut(s) | 297, 1516, 1957, 2939, 2987, 3142 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2422 |
| XbaI | TCTAGA | 4 cut(s) | 1717, 1864, 2659, 2797 |
| XceI | RCATGY | 3 cut(s) | 440, 1184, 2980 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 449, 1052 |
| XhoI | CTCGAG | 1 cut(s) | 2039 |
| XmiI | GTMKAC | 5 cut(s) | 1008, 1041, 2258, 2410, 3426 |
| XmnI | GAANNNNTTC | 2 cut(s) | 891, 2913 |
| ZrmI | AGTACT | 1 cut(s) | 2000 |
| Zsp2I | ATGCAT | 2 cut(s) | 1572, 2746 |