Rw7G036440

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
55028878 .. 55032749
3872 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G036440.1

Sequence Viewer

Length: 2928 bp
ATGCCATCGCCGCCGGTGCCGTCGCCATCCTCATCGCCGCCGGTGCCGTCGCCATCGGGGCCACCATCCCCATGGGAGCCCTTACAATACCGGACGTCCTATGACGTGTTCTTGAGCTTCAGAGGTGAAGAGACACGAAGGACCTTCACGGACCACCTCTACGCGGCACTAGATCGTGCCGGAGTCGTGACGTTTAGGGATGCCGAGGGACTAAGATGGGGAGAAAACATAGCGGAGAAATTAATGCAGATAATCGAAGGGTGTAGGATCTCTCTCATAGTCTTCTCAGACAAGTACGCGGATTCGAGATGGTGTCTGGAGGAGCTGGTGCAGATCATGGAGTGTAGAAGAACACGAAGGCAACTGGTTTTCCCCATATTCTATCATGTTGATCCTTCACATGTCAGAAACCAGACCGGTAGCTTTGCTCATGCGTTTCAGAAATATGAAGAAAAGATGCTCTCAGAAAAACAAGAAGAACTTGGAGATAAGATAGCCAGGTGGAGAGCTGCTCTCAGAGGAGCGGCGAATTTGGTTGGCTTAGATATTGCGGATAGACATGAAGCAGAGTTTATCAATAGCATTGTTGACGAGATATGCAGACAGCTGACCAACACATACTTGAATTTAGCTGTCTACCCAGTTGCAATACATTCTCGTGTTGATGATATTAGTAAGTGTTTAGGTGTTGGATTAGATGATGATGTTCGCATGGTTGGAATTTGGGGTATGGGTGGAATCGGCAAAACAACAGTTGCCAAAGCCATCTATAACAAATTTTATCATGACTTTGACAGTAGATGTTTCCTAGCAGATGTTAGGGAGACTGCAAAGGACTCAAATGGTAAGATTACTCTGCAAGAAAGACTTCTTTCTGATGTCTTAAAACCAATCAAGATAGTGGTAGGTGATGTTTCCAGAGGGATCAATGTAATAAAAGAACGATTTGGAAGCAAAAAGGTACTTGTCATTGTTGATGATGTAGATCATGAGGACCAATTGCATGCATTGGCAATAAGGCGTGATTCCTTTGGTCCAGGAAGTAGAATAATTATAACAACAAGAGATCGACATTTGCTAGAGCTACTGAAAGTGGATACAATACATCTAACTCAAGAAATGAATGAAGAAGAAGCTCTTGAGCTCTTCAGTTGGCATGCCTTTCAAAATATTTCTCCTAATGAAGACTATGTCGAACTCTCAAGAAGAGTGGTTGCTTACTGTGGAGGTTTACCACTGGGTCTTGAAGTTTTAGGGTCTTTCCCCTTTGGAAGGAGCATAGGAGATTGGAATAGCACACTGAAGAAATTGGAAAAAATTCCTGATGGAAGAATTCAGTCAAGGCTCAGAATAAGCTTTGATGCAATTGATGAGAGCCAGAGGAACATATTCCTCCATATATGTTGTTTCTTCATCGGAATGGACAAGAACTACGTCATACAAATCCTCAACAGCTATGGTTTTCCAGCAGAAATAGAAATCAGTGTCCTGCTCCAACGTTGTCTTGTAACTGTCAGTGAAAAAAACAAGCTCATGATGCATGATTTGCTTCGAGACATGGGCAGAGAAGTTGTTCGTGAAGAATCCCCGAACCGCCCTGAAAGACGTAGTAGACTGTGGCGTCAGGAAGATGTAATAGATGTATTGACAGATGGATCTGGAACTGAAAAGACTGAAGGACTCGCTCTAAACTTGCAAAGATCTAACAACATGAGTTTTGGTACAGAAGCATTTAGAAACATGAAGAGACTGAAATTGCTCCAACTCAAGTATGTACAACTCACTGGAGACTGCAACAAGTTTCCCAGAAAGTTAAGCTGGCTCTGCTTGCGAGGATTCTCTCCACAGATCATACGAAATGAGTTTCTTAATGCAACCCACCTGATTTCTATCGACCTGCGGTACAGCAATCTCGTACGAGTTTGGGAGGATTCCAGGCGGCTTTCGAGATTGGAAATACTTAATCTCAGTCATTCAAATTACCTAAGACAATCACCAGACTTTTCACAACTCCCAAATCTACACTATTTGATCCTTAAAGACTGTGTGAGTTTGCCAAAGATTGACAAGTCCATTGGACTTCTTGATGGACTTGCCTTGCTAAATCTTAAAGGCTGCACATTGCTCAAGGACCTTCCGGAGGATTTTTACAAGTTGCCCTCTGTTAGGACTCTTGTTCTTTCTGGCTGTTCGAGATTTGAGAAATTGAGCAAGCATATAGGAAAAATGGATTCTTTGAAAACTCTTGTTATAAGTGGCACAGGCATAAGTGAAGTACCATACTCTGTAGATTGCCTTCGGAACCTGGACTTTTCATCTCGACAAGGCCTGAGTGGATTCAAACGATGTGATCAGACATTAACCCCTAGGCAGCGTTTGTGGGGGCAGCTTTTGTGGTGGCTTTTGCTGATTTTGTTTCTTCTTCTGGGAGGAGGGGAAGTGCTACTGGGAAAAGGCAGGCAGAAGCCGGCAACCGTTAGTACAGAAGGACTAACTGAAGGACTCGCTCTAAATTTGCAGATATCTGACAACACGAGTTTCAGTACAAAAGCATTTAGAAATATGATGTTTTTCTCTTCACAGGTCATACGAAATGAGTTTCTTAATGAAACATACCGGGTTTCTATCGACCTGCGGTCCAGCAATCTCGTACGAGTTTGGGAGTATTCCAAGCGGCTTGAGAAATGGGAGATACTTAATCTCAGTCATTCACATCACCTAAGACAATCCCCAAACTTTTCACAACTCCCAAATCTACAGTATTTGATCCTTAAAGACTCTGTAAGTTTGCCAAAGATTGACGAGTCCATTGAACTTCTTGATGGACTTGGCTGCACATTGCCCAAGGACCTTCCGGAGGATTTTTACAAGTTGCCCTGTGTTTGGACTTGCTGGAAATTTAAATGTGAAGACCTGGAATTTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

975

Amino Acids

111.66

Weight (kDa)

7.75

Isoelectric Point (pI)

57.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 34 - 207 4e-47 TIR domain
TIR_2 PF13676 36 - 132 2.8e-13 TIR domain
NB-ARC PF00931 233 - 390 4e-19 NB-ARC domain
WHD_ROQ1 PF23282 458 - 529 1.8e-16 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 699 - 769 4.2e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1055, 2252
AasI GACNNNNNNGTC 1 cut(s) 1620
AatII GACGTC 1 cut(s) 98
Acc36I ACCTGC 2 cut(s) 1905, 2640
AccB1I GGYRCC 2 cut(s) 16, 43
AccBSI CCGCTC 1 cut(s) 524
AccI GTMKAC 2 cut(s) 636, 1612
AccII CGCG 2 cut(s) 164, 299
AccIII TCCGGA 2 cut(s) 2137, 2854
AclI AACGTT 1 cut(s) 1498
AclWI GGATC 6 cut(s) 275, 386, 932, 1663, 2026, 2761
AcsI RAATTY 9 cut(s) 529, 625, 720, 776, 1317, 1332, 2512, 2897, 2918
AcuI CTGAAG 5 cut(s) 103, 1132, 1322, 1695, 2517
AcyI GRCGYC 2 cut(s) 95, 1621
AfiI CCNNNNNNNGG 6 cut(s) 163, 1272, 2140, 2166, 2857, 2883
AflIII ACRYGT 2 cut(s) 105, 400
AgeI ACCGGT 1 cut(s) 416
AgsI TTSAA 7 cut(s) 625, 1166, 1247, 1977, 2239, 2341, 2813
AhdI GACNNNNNGTC 1 cut(s) 2635
AjiI CACGTC 1 cut(s) 106
AjnI CCWGG 5 cut(s) 497, 1036, 1934, 2304, 2913
Alw21I GWGCWC 1 cut(s) 1146
Alw26I GTCTC 5 cut(s) 125, 818, 1548, 1741, 1782
AlwI GGATC 6 cut(s) 275, 386, 932, 1663, 2026, 2761
Aor13HI TCCGGA 2 cut(s) 2137, 2854
AoxI GGCC 2 cut(s) 59, 2326
ApeKI GCWGC 5 cut(s) 509, 2115, 2371, 2386, 2832
ApoI RAATTY 9 cut(s) 529, 625, 720, 776, 1317, 1332, 2512, 2897, 2918
AseI ATTAAT 1 cut(s) 242
AsiGI ACCGGT 1 cut(s) 416
Asp700I GAANNNNTTC 4 cut(s) 867, 1317, 1388, 1572
AspA2I CCTAGG 1 cut(s) 2366
AspS9I GGNCC 8 cut(s) 59, 141, 151, 994, 1034, 2131, 2637, 2848
AsuC2I CCSGG 1 cut(s) 2618
AsuHPI GGTGA 4 cut(s) 137, 920, 1986, 2708
AvaII GGWCC 7 cut(s) 141, 151, 994, 1034, 2131, 2637, 2848
AvrII CCTAGG 1 cut(s) 2366
BanI GGYRCC 2 cut(s) 16, 43
BanII GRGCYC 2 cut(s) 81, 1146
BarI GAAGNNNNNNTAC 2 cut(s) 2280, 2312
BauI CACGAG 2 cut(s) 657, 2533
BbsI GAAGAC 3 cut(s) 274, 1191, 2916
Bbv12I GWGCWC 1 cut(s) 1146
BbvI GCAGC 5 cut(s) 496, 2102, 2383, 2398, 2819
BceAI ACGGC 2 cut(s) 4, 31
BciT130I CCWGG 5 cut(s) 499, 1038, 1936, 2306, 2915
BciVI GTATCC 1 cut(s) 1090
BclI TGATCA 1 cut(s) 2350
BcnI CCSGG 1 cut(s) 2618
BcoDI GTCTC 5 cut(s) 125, 818, 1548, 1741, 1782
BfaI CTAG 4 cut(s) 170, 809, 1079, 2367
BfmI CTRYAG 2 cut(s) 2286, 2756
BfuAI ACCTGC 2 cut(s) 1905, 2640
BfuI GTATCC 1 cut(s) 1090
BglI GCCNNNNNGGC 1 cut(s) 58
BglII AGATCT 1 cut(s) 1700
BlnI CCTAGG 1 cut(s) 2366
Bme1390I CCNGG 6 cut(s) 499, 1038, 1936, 2306, 2618, 2915
Bme18I GGWCC 7 cut(s) 141, 151, 994, 1034, 2131, 2637, 2848
BmeRI GACNNNNNGTC 1 cut(s) 2635
BmgBI CACGTC 1 cut(s) 106
BmgT120I GGNCC 8 cut(s) 59, 141, 151, 994, 1034, 2131, 2637, 2848
BmiI GGNNCC 5 cut(s) 18, 45, 60, 78, 2303
BmrFI CCNGG 6 cut(s) 499, 1038, 1936, 2306, 2618, 2915
BmrI ACTGGG 3 cut(s) 635, 1247, 2456
BmsI GCATC 4 cut(s) 190, 447, 1351, 1527
BmuI ACTGGG 3 cut(s) 635, 1247, 2456
BpiI GAAGAC 3 cut(s) 274, 1191, 2916
BplI GAGNNNNNCTC 4 cut(s) 496, 528, 498, 530
BpmI CTGGAG 2 cut(s) 338, 1806
BpuEI CTTGAG 7 cut(s) 133, 1098, 1160, 1186, 1751, 2111, 2699
BpuMI CCSGG 1 cut(s) 2618
BsaBI GATNNNNATC 2 cut(s) 984, 1889
BsaHI GRCGYC 2 cut(s) 95, 1621
BsaJI CCNNGG 4 cut(s) 71, 204, 2366, 2844
BsaWI WCCGGW 4 cut(s) 90, 416, 2137, 2854
BsaXI ACNNNNNCTCC 2 cut(s) 2424, 2454
Bsc4I CCNNNNNNNGG 6 cut(s) 163, 1272, 2140, 2166, 2857, 2883
Bse118I RCCGGY 4 cut(s) 13, 40, 416, 2467
Bse1I ACTGG 5 cut(s) 369, 641, 1242, 1789, 2451
Bse3DI GCAATG 2 cut(s) 2120, 2837
Bse8I GATNNNNATC 2 cut(s) 984, 1889
BseAI TCCGGA 2 cut(s) 2137, 2854
BseBI CCWGG 5 cut(s) 499, 1038, 1936, 2306, 2915
BseDI CCNNGG 4 cut(s) 71, 204, 2366, 2844
BseGI GGATG 3 cut(s) 26, 65, 205
BseJI GATNNNNATC 2 cut(s) 984, 1889
BseLI CCNNNNNNNGG 6 cut(s) 163, 1272, 2140, 2166, 2857, 2883
BseMI GCAATG 2 cut(s) 2120, 2837
BseMII CTCAG 7 cut(s) 300, 477, 529, 1360, 1981, 2321, 2716
BseNI ACTGG 5 cut(s) 369, 641, 1242, 1789, 2451
BseRI GAGGAG 3 cut(s) 335, 534, 2445
BseXI GCAGC 5 cut(s) 496, 2102, 2383, 2398, 2819
BsgI GTGCAG 3 cut(s) 350, 2101, 2818
Bsh1236I CGCG 2 cut(s) 164, 299
BshFI GGCC 2 cut(s) 61, 2328
BshNI GGYRCC 2 cut(s) 16, 43
BshTI ACCGGT 1 cut(s) 416
BsiHKAI GWGCWC 1 cut(s) 1146
BsiSI CCGG 9 cut(s) 14, 41, 91, 180, 417, 2138, 2468, 2617, 2855
BsiWI CGTACG 2 cut(s) 1915, 2650
BslFI GGGAC 1 cut(s) 222
BslI CCNNNNNNNGG 6 cut(s) 163, 1272, 2140, 2166, 2857, 2883
BsmAI GTCTC 5 cut(s) 125, 818, 1548, 1741, 1782
BsmFI GGGAC 1 cut(s) 222
BsnI GGCC 2 cut(s) 61, 2328
Bsp1286I GDGCHC 2 cut(s) 81, 1146
Bsp13I TCCGGA 2 cut(s) 2137, 2854
Bsp1407I TGTACA 1 cut(s) 1774
Bsp19I CCATGG 1 cut(s) 71
BspANI GGCC 2 cut(s) 61, 2328
BspCNI CTCAG 7 cut(s) 299, 476, 528, 1359, 1980, 2322, 2715
BspEI TCCGGA 2 cut(s) 2137, 2854
BspFNI CGCG 2 cut(s) 164, 299
BspHI TCATGA 3 cut(s) 784, 988, 1533
BspLI GGNNCC 5 cut(s) 18, 45, 60, 78, 2303
BspMI ACCTGC 2 cut(s) 1905, 2640
BspPI GGATC 6 cut(s) 275, 386, 932, 1663, 2026, 2761
BspQI GCTCTTC 1 cut(s) 1151
BspT107I GGYRCC 2 cut(s) 16, 43
BsrBI CCGCTC 1 cut(s) 524
BsrDI GCAATG 2 cut(s) 2120, 2837
BsrFI RCCGGY 4 cut(s) 13, 40, 416, 2467
BsrGI TGTACA 1 cut(s) 1774
BsrI ACTGG 5 cut(s) 369, 641, 1242, 1789, 2451
BssAI RCCGGY 4 cut(s) 13, 40, 416, 2467
BssECI CCNNGG 4 cut(s) 71, 204, 2366, 2844
BssNI GRCGYC 2 cut(s) 95, 1621
BssSI CACGAG 2 cut(s) 657, 2533
BssT1I CCWWGG 3 cut(s) 71, 2366, 2844
Bst2BI CACGAG 2 cut(s) 657, 2533
Bst2UI CCWGG 5 cut(s) 499, 1038, 1936, 2306, 2915
Bst4CI ACNGT 8 cut(s) 754, 797, 1223, 1513, 1617, 2045, 2476, 2760
Bst6I CTCTTC 5 cut(s) 123, 1151, 1201, 1739, 2581
BstACI GRCGYC 2 cut(s) 95, 1621
BstAPI GCANNNNNTGC 1 cut(s) 1546
BstAUI TGTACA 1 cut(s) 1774
BstC8I GCNNGC 7 cut(s) 1005, 1158, 1820, 1829, 2213, 2459, 2469
BstDSI CCRYGG 1 cut(s) 71
BstENI CCTNNNNNAGG 4 cut(s) 1270, 2138, 2164, 2855
BstF5I GGATG 3 cut(s) 26, 65, 205
BstFNI CGCG 2 cut(s) 164, 299
BstMAI GTCTC 5 cut(s) 125, 818, 1548, 1741, 1782
BstMWI GCNNNNNNNGC 8 cut(s) 10, 16, 43, 58, 1537, 1546, 1824, 1828
BstNI CCWGG 5 cut(s) 499, 1038, 1936, 2306, 2915
BstNSI RCATGY 3 cut(s) 404, 1007, 1160
BstSCI CCNGG 6 cut(s) 497, 1036, 1934, 2304, 2616, 2913
BstSFI CTRYAG 2 cut(s) 2286, 2756
BstUI CGCG 2 cut(s) 164, 299
BstV1I GCAGC 5 cut(s) 496, 2102, 2383, 2398, 2819
BstV2I GAAGAC 3 cut(s) 274, 1191, 2916
BstX2I RGATCY 3 cut(s) 267, 1655, 1700
BstXI CCANNNNNNTGG 1 cut(s) 72
BstYI RGATCY 3 cut(s) 267, 1655, 1700
BsuI GTATCC 1 cut(s) 1090
BsuRI GGCC 2 cut(s) 61, 2328
BtgI CCRYGG 1 cut(s) 71
BtgZI GCGATG 1 cut(s) 18
BtrI CACGTC 1 cut(s) 106
BtsCI GGATG 3 cut(s) 26, 65, 205
BtsIMutI CAGTG 5 cut(s) 1235, 1298, 1489, 1522, 1782
BveI ACCTGC 2 cut(s) 1905, 2640
Cac8I GCNNGC 7 cut(s) 1005, 1158, 1820, 1829, 2213, 2459, 2469
CciI TCATGA 3 cut(s) 784, 988, 1533
Cfr10I RCCGGY 4 cut(s) 13, 40, 416, 2467
Cfr13I GGNCC 8 cut(s) 59, 141, 151, 994, 1034, 2131, 2637, 2848
CseI GACGC 1 cut(s) 1610
CspAI ACCGGT 1 cut(s) 416
CspCI CAANNNNNGTGG 2 cut(s) 1191, 1226
DraI TTTAAA 1 cut(s) 2902
DrdI GACNNNNNNGTC 1 cut(s) 1620
DriI GACNNNNNGTC 1 cut(s) 2635
DseDI GACNNNNNNGTC 1 cut(s) 1620
Eam1104I CTCTTC 5 cut(s) 123, 1151, 1201, 1739, 2581
Eam1105I GACNNNNNGTC 1 cut(s) 2635
EarI CTCTTC 5 cut(s) 123, 1151, 1201, 1739, 2581
Ecl136II GAGCTC 1 cut(s) 1144
Eco130I CCWWGG 3 cut(s) 71, 2366, 2844
Eco147I AGGCCT 1 cut(s) 2328
Eco24I GRGCYC 2 cut(s) 81, 1146
Eco32I GATATC 1 cut(s) 2523
Eco47I GGWCC 7 cut(s) 141, 151, 994, 1034, 2131, 2637, 2848
Eco53kI GAGCTC 1 cut(s) 1144
Eco57I CTGAAG 5 cut(s) 103, 1132, 1322, 1695, 2517
EcoICRI GAGCTC 1 cut(s) 1144
EcoNI CCTNNNNNAGG 4 cut(s) 1270, 2138, 2164, 2855
EcoO109I RGGNCCY 3 cut(s) 141, 2131, 2848
EcoRI GAATTC 1 cut(s) 1332
EcoRII CCWGG 5 cut(s) 497, 1036, 1934, 2304, 2913
EcoRV GATATC 1 cut(s) 2523
EcoT14I CCWWGG 3 cut(s) 71, 2366, 2844
EcoT22I ATGCAT 2 cut(s) 1009, 1542
EcoT38I GRGCYC 2 cut(s) 81, 1146
ErhI CCWWGG 3 cut(s) 71, 2366, 2844
FalI AAGNNNNNCTT 6 cut(s) 465, 497, 852, 884, 1122, 1154
FaqI GGGAC 1 cut(s) 222
FbaI TGATCA 1 cut(s) 2350
FblI GTMKAC 2 cut(s) 636, 1612
FokI GGATG 3 cut(s) 13, 52, 212
FriOI GRGCYC 2 cut(s) 81, 1146
FspBI CTAG 4 cut(s) 170, 809, 1079, 2367
GsuI CTGGAG 2 cut(s) 338, 1806
HaeIII GGCC 2 cut(s) 61, 2328
HapII CCGG 9 cut(s) 14, 41, 91, 180, 417, 2138, 2468, 2617, 2855
HgaI GACGC 1 cut(s) 1610
Hin1I GRCGYC 2 cut(s) 95, 1621
HincII GTYRAC 1 cut(s) 589
HindII GTYRAC 1 cut(s) 589
HindIII AAGCTT 1 cut(s) 1354
HpaII CCGG 9 cut(s) 14, 41, 91, 180, 417, 2138, 2468, 2617, 2855
HphI GGTGA 4 cut(s) 137, 920, 1986, 2708
Hpy166II GTNNAC 4 cut(s) 589, 637, 1232, 1613
Hpy8I GTNNAC 4 cut(s) 589, 637, 1232, 1613
Hpy99I CGWCG 2 cut(s) 25, 52
HpyCH4III ACNGT 8 cut(s) 754, 797, 1223, 1513, 1617, 2045, 2476, 2760
HpyCH4IV ACGT 6 cut(s) 95, 105, 191, 1434, 1498, 1606
HpyF10VI GCNNNNNNNGC 8 cut(s) 10, 16, 43, 58, 1537, 1546, 1824, 1828
HpySE526I ACGT 6 cut(s) 95, 105, 191, 1434, 1498, 1606
Hsp92I GRCGYC 2 cut(s) 95, 1621
Kpn2I TCCGGA 2 cut(s) 2137, 2854
KroI GCCGGC 1 cut(s) 2467
KroNI GCCGGC 1 cut(s) 2469
Ksp22I TGATCA 1 cut(s) 2350
LguI GCTCTTC 1 cut(s) 1151
LmnI GCTCC 6 cut(s) 76, 322, 521, 1275, 1497, 1764
Lsp1109I GCAGC 5 cut(s) 496, 2102, 2383, 2398, 2819
LweI GCATC 4 cut(s) 190, 447, 1351, 1527
MaeI CTAG 4 cut(s) 170, 809, 1079, 2367
MaeII ACGT 6 cut(s) 95, 105, 191, 1434, 1498, 1606
MaeIII GTNAC 2 cut(s) 187, 1507
MbiI CCGCTC 1 cut(s) 524
MfeI CAATTG 2 cut(s) 998, 1365
MflI RGATCY 3 cut(s) 267, 1655, 1700
MhlI GDGCHC 2 cut(s) 81, 1146
MlyI GAGTC 7 cut(s) 192, 830, 1674, 2164, 2496, 2771, 2813
MmeI TCCRAC 4 cut(s) 670, 697, 1519, 1786
Mph1103I ATGCAT 2 cut(s) 1009, 1542
MroI TCCGGA 2 cut(s) 2137, 2854
MroNI GCCGGC 1 cut(s) 2467
MroXI GAANNNNTTC 4 cut(s) 867, 1317, 1388, 1572
MslI CAYNNNNRTG 3 cut(s) 70, 657, 1418
MspA1I CMGCKG 1 cut(s) 607
MspI CCGG 9 cut(s) 14, 41, 91, 180, 417, 2138, 2468, 2617, 2855
MspR9I CCNGG 6 cut(s) 499, 1038, 1936, 2306, 2618, 2915
MunI CAATTG 2 cut(s) 998, 1365
MvaI CCWGG 5 cut(s) 499, 1038, 1936, 2306, 2915
MvnI CGCG 2 cut(s) 164, 299
MwoI GCNNNNNNNGC 8 cut(s) 10, 16, 43, 58, 1537, 1546, 1824, 1828
NaeI GCCGGC 1 cut(s) 2469
NciI CCSGG 1 cut(s) 2618
NcoI CCATGG 1 cut(s) 71
NgoMIV GCCGGC 1 cut(s) 2467
NlaIV GGNNCC 5 cut(s) 18, 45, 60, 78, 2303
NmeAIII GCCGAG 1 cut(s) 229
NmuCI GTSAC 1 cut(s) 187
NsiI ATGCAT 2 cut(s) 1009, 1542
NspI RCATGY 3 cut(s) 404, 1007, 1160
PaeI GCATGC 2 cut(s) 1007, 1160
PagI TCATGA 3 cut(s) 784, 988, 1533
PceI AGGCCT 1 cut(s) 2328
PciI ACATGT 1 cut(s) 400
PciSI GCTCTTC 1 cut(s) 1151
PdiI GCCGGC 1 cut(s) 2469
PdmI GAANNNNTTC 4 cut(s) 867, 1317, 1388, 1572
PfeI GAWTC 8 cut(s) 302, 738, 1025, 1583, 1836, 1931, 2231, 2337
Pfl23II CGTACG 2 cut(s) 1915, 2650
PflFI GACNNNGTC 1 cut(s) 1190
PfoI TCCNGGA 1 cut(s) 1036
PinAI ACCGGT 1 cut(s) 416
PleI GAGTC 7 cut(s) 191, 830, 1674, 2164, 2496, 2771, 2812
PpsI GAGTC 7 cut(s) 191, 830, 1674, 2164, 2496, 2771, 2812
PpuMI RGGWCCY 3 cut(s) 141, 2131, 2848
PscI ACATGT 1 cut(s) 400
PshBI ATTAAT 1 cut(s) 242
PsiI TTATAA 2 cut(s) 1055, 2252
Psp124BI GAGCTC 1 cut(s) 1146
Psp1406I AACGTT 1 cut(s) 1498
Psp5II RGGWCCY 3 cut(s) 141, 2131, 2848
Psp6I CCWGG 5 cut(s) 497, 1036, 1934, 2304, 2913
PspGI CCWGG 5 cut(s) 497, 1036, 1934, 2304, 2913
PspLI CGTACG 2 cut(s) 1915, 2650
PspN4I GGNNCC 5 cut(s) 18, 45, 60, 78, 2303
PspPI GGNCC 8 cut(s) 59, 141, 151, 994, 1034, 2131, 2637, 2848
PspPPI RGGWCCY 3 cut(s) 141, 2131, 2848
PsuI RGATCY 3 cut(s) 267, 1655, 1700
PsyI GACNNNGTC 1 cut(s) 1190
PvuII CAGCTG 1 cut(s) 607
RseI CAYNNNNRTG 3 cut(s) 70, 657, 1418
SacI GAGCTC 1 cut(s) 1146
SapI GCTCTTC 1 cut(s) 1151
Sau96I GGNCC 8 cut(s) 59, 141, 151, 994, 1034, 2131, 2637, 2848
SchI GAGTC 7 cut(s) 192, 830, 1674, 2164, 2496, 2771, 2813
ScrFI CCNGG 6 cut(s) 499, 1038, 1936, 2306, 2618, 2915
SduI GDGCHC 2 cut(s) 81, 1146
SfaNI GCATC 4 cut(s) 190, 447, 1351, 1527
SfcI CTRYAG 2 cut(s) 2286, 2756
SgrAI CRCCGGYG 2 cut(s) 13, 40
SinI GGWCC 7 cut(s) 141, 151, 994, 1034, 2131, 2637, 2848
SmiI ATTTAAAT 1 cut(s) 2902
SmiMI CAYNNNNRTG 3 cut(s) 70, 657, 1418
SmlI CTYRAG 7 cut(s) 112, 1113, 1139, 1201, 1766, 2126, 2678
SmoI CTYRAG 7 cut(s) 112, 1113, 1139, 1201, 1766, 2126, 2678
SphI GCATGC 2 cut(s) 1007, 1160
SseBI AGGCCT 1 cut(s) 2328
SspI AATATT 1 cut(s) 1171
SspMI CTAG 4 cut(s) 170, 809, 1079, 2367
SstI GAGCTC 1 cut(s) 1146
StuI AGGCCT 1 cut(s) 2328
StyD4I CCNGG 6 cut(s) 497, 1036, 1934, 2304, 2616, 2913
StyI CCWWGG 3 cut(s) 71, 2366, 2844
SwaI ATTTAAAT 1 cut(s) 2902
TaaI ACNGT 8 cut(s) 754, 797, 1223, 1513, 1617, 2045, 2476, 2760
TaiI ACGT 6 cut(s) 98, 108, 194, 1437, 1501, 1609
TatI WGTACW 3 cut(s) 1774, 2480, 2543
TauI GCSGC 6 cut(s) 13, 40, 167, 527, 1942, 2677
TfiI GAWTC 8 cut(s) 302, 738, 1025, 1583, 1836, 1931, 2231, 2337
TscAI CASTG 5 cut(s) 1242, 1305, 1489, 1522, 1789
TseFI GTSAC 1 cut(s) 187
TseI GCWGC 5 cut(s) 509, 2115, 2371, 2386, 2832
Tsp45I GTSAC 1 cut(s) 187
TspGWI ACGGA 1 cut(s) 164
TspRI CASTG 5 cut(s) 1242, 1305, 1489, 1522, 1789
Tth111I GACNNNGTC 1 cut(s) 1190
VpaK11BI GGWCC 7 cut(s) 141, 151, 994, 1034, 2131, 2637, 2848
VspI ATTAAT 1 cut(s) 242
XagI CCTNNNNNAGG 4 cut(s) 1270, 2138, 2164, 2855
XapI RAATTY 9 cut(s) 529, 625, 720, 776, 1317, 1332, 2512, 2897, 2918
XceI RCATGY 3 cut(s) 404, 1007, 1160
XcmI CCANNNNNNNNNTGG 1 cut(s) 69
XmaJI CCTAGG 1 cut(s) 2366
XmiI GTMKAC 2 cut(s) 636, 1612
XmnI GAANNNNTTC 4 cut(s) 867, 1317, 1388, 1572
XspI CTAG 4 cut(s) 170, 809, 1079, 2367
ZraI GACGTC 1 cut(s) 96
Zsp2I ATGCAT 2 cut(s) 1009, 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.