Rmu_sc0008646.1_g000007

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008646.1
Physical Location & Seq
Forward (+)
23558 .. 27760
4203 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008646.1_g000007.1.cds

Sequence Viewer

Length: 3261 bp
atgctaccaatggctaccagcaggaaagccgatgaagcctcctcttcatcctcctcttcatcctcaaatcattggatttatgaggttttattgagcttcaggggagaagatacgcgcaagaacttcacggaccatctctacctgaccttaaaggaggctggaatcaatgctttcattgacgacaatctggagcggggagagattatagatgaggaactgttgcgggcaatccaagggtccaaaatcagtgtcatcgtcttctcaagtaggtatgcggattccagttggtgtcttgaggagctagacaagatcatggagtgtagaacagcactgggacagctagcccttccagtattctatgatgttgatccttcagatgtcctgaaacagagtggtagtttcggagaggcatttgatcagaaacatggagacgaacatgaagataaggtcaagaggtggagaactgctcttactgaagctgcaactttgtctggctgggatcttaacaccacagctgatgggcatgaagggaaatttatcaggatgattattgaggagatcactaaatatctcaataacacagatttatatgtggcagacaatgaaactggaatagactctcgtatgcaagatattatttctcttttagatgttggaacatcacatgatgttcgcattcttggaatttgtggtatggggggcatcgggaaaacaacagttgcaaaggctctttacaacaaatttcggcaagactttgaagcttcaagtttccttcgtgatgtcagggaaactactatgcagaacaatggtttggttagtttgcaaaaaagccttctttctggtatctctaaaacaagcataaccgaggtaggtcatgttgacagagggatcattttgataagagagagactcggatgcagaagggtattcgtcgtaattgatgatgtcgacaaagtggagcaattgaaggcattagcaatagaccgtgactcatttggccggggaagcatagtgcttataacaacaagaaatgaacatttgctaaagcaatttggagaggattctatatatcaatttcaggtgatggatgaagaagaatctatcagactcttgagtttgcatgcctttaaaactcgttgcccccctaatgaagaatatcttatactctcaagaagggttgttgattgctgtggaggtttgccactagctcttaaagttctaggttcttttctatttgatagaaacacagaattttgggaaagtgcaatccagaaattgcatacaattcctcagcccgaagttcatgaaaagctcaaaataagttttgatgggctaaacgatgatacagagagggacttattccttgatatatcatgtttccatatcgggaaggcaatggacgatgtcaaaccaatattagatagttgtggcctttttccagattcaggaattcaggtcctcattcaacgttgccttgtaactgtaaataaggaaaaccagctgatgatgcatgatttgcttcgcgacatgggtagagaaattgtccgtgcaaaatgccgtgacaaccctggaaaatggagtagggtgtggcactgggaagatgcagtagaggtattgagggatgcatctggatctgatgaaattcaaggactcactctagacctgtggagattaaatttaaagaaagaatttaagacaaaagcatttgcaaaaatgaagagcctgagatttctcaaactccatggtgtaaaggtcattggacggtgcaaatatctccccaagaagttaagatggctcgactggaatggattccctctagagttcataccaaaagagttcagtctaggagaagcagttgctatccacctgcgaggtagcaacctcagacacgtttgggaagattctgggattcttgatctcagttattccttttccttaaaacaatcaccagacttttcaactattcccaatctcgagaagttagtcctcaacagctgtgagcaattggcagaggttcaccagtccattggaagactcaaaaggctttcttttgttgatcttacggactgcaaaattcttgaggagcttcctaggagtttctataagttaaaatctgtagaaactcttgttcttgatggctgtgaaagatttaagaaattgcacgaggaaataggggacatgacatcgttgtctactctgaatgcaaattgcactgccataacagaactgccatcttccattgtgagattaaagaacctgagctgcttacatctacaatcttgggatcccactgatgcagattgggaagggattaccttgaactctctcatgtcgacacctaatttccataatctcaatttgcctccttccgttcaaggcttaagctctttagttgatctatctatcaattgctgcattataactaatgttcctaaggatcttggaagtctatcttccttggaaagtttagatataagacactgttacttgcaaagcctgccaagcctcagtgccctgtcccagcttgtatacctacgcttgctagattgcaatcttacagatgaattgataagagttatggatcttgggagtctatcttctttgaaattgttacatcttgatgataacagtttcagtagccttccaagcctccgcagcctgtctaagcttgtcaatctaagtttgagaagttgtacaaaccttgttgcaattcccgatttaccgacaagtctgaagaacctctgcgcctccgactgcactgcattgaaagtaatgcccgacttttcagatatgtccaatatgagacagatgtatctagatggatgtgccaaactcgttgaggttcaaggcttggatgaatctttgaaaagctccatgacgctgcttgaaatgggagggtgcacagatctcactgccactttcaaggagaaaattctacaggtctctctctctcaaaataatcttgctctttcttcttggatgggacctggtggcatatttctccctccgagtgacattcctgagtggttcccgtgggatgaatttgaccttgaacttgcatctattgacattttggttacaaaccataccaagctcgctacattttccactgagcctgtggaatcaggctctgaaagcaattgtttcgagtttctttggctgggacatttacccagccataagttcaatttggaaggaggcgacttggttgaaattttgataggaatcacatcctgtctactgtgtcagcatcaatcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1086

Amino Acids

122.04

Weight (kDa)

5.21

Isoelectric Point (pI)

42.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1019, 2420
AarI CACCTGC 1 cut(s) 1875
AasI GACNNNNNNGTC 1 cut(s) 2188
Acc36I ACCTGC 1 cut(s) 1875
AccBSI CCGCTC 1 cut(s) 193
AccI GTMKAC 5 cut(s) 948, 2192, 2333, 2529, 3238
AccII CGCG 2 cut(s) 115, 1524
AciI CCGC 4 cut(s) 193, 223, 275, 2653
AclI AACGTT 1 cut(s) 1468
AclWI GGATC 8 cut(s) 362, 507, 896, 1639, 2279, 2292, 2445, 2589
AcoI YGGCCR 1 cut(s) 997
AcuI CTGAAG 4 cut(s) 82, 357, 495, 2753
AfaI GTAC 1 cut(s) 2695
AfiI CCNNNNNNNGG 1 cut(s) 1445
AflII CTTAAG 1 cut(s) 2380
AflIII ACRYGT 1 cut(s) 1888
AjnI CCWGG 2 cut(s) 1567, 2986
AjuI GAANNNNNNNTTGG 2 cut(s) 794, 826
Alw21I GWGCWC 1 cut(s) 2903
Alw26I GTCTC 4 cut(s) 423, 901, 2797, 2947
Alw44I GTGCAC 1 cut(s) 2899
AlwI GGATC 8 cut(s) 362, 507, 896, 1639, 2279, 2292, 2445, 2589
AlwNI CAGNNNCTG 1 cut(s) 3131
Ama87I CYCGRG 1 cut(s) 1973
AoxI GGCC 2 cut(s) 997, 1429
ApaLI GTGCAC 1 cut(s) 2899
ApeKI GCWGC 5 cut(s) 479, 2262, 2412, 2655, 2881
ArsI GACNNNNNNTTYG 2 cut(s) 234, 266
Asp700I GAANNNNTTC 1 cut(s) 1808
AspA2I CCTAGG 1 cut(s) 2090
AspLEI GCGC 2 cut(s) 117, 2747
AspS9I GGNCC 4 cut(s) 130, 237, 1456, 2984
AsuC2I CCSGG 1 cut(s) 1001
AsuHPI GGTGA 3 cut(s) 1093, 1938, 2009
AsuNHI GCTAGC 1 cut(s) 340
AvaI CYCGRG 1 cut(s) 1973
AvaII GGWCC 4 cut(s) 130, 237, 1456, 2984
AvrII CCTAGG 1 cut(s) 2090
AxyI CCTNAGG 1 cut(s) 2433
BaeGI GKGCMC 2 cut(s) 2515, 2903
BaeI ACNNNNGTAYC 2 cut(s) 2795, 2828
BamHI GGATCC 1 cut(s) 2284
BauI CACGAG 1 cut(s) 2162
BbsI GAAGAC 2 cut(s) 250, 2038
Bbv12I GWGCWC 1 cut(s) 2903
BbvCI CCTCAGC 1 cut(s) 1290
BbvI GCAGC 5 cut(s) 466, 2249, 2399, 2667, 2868
BccI CCATC 9 cut(s) 141, 512, 1078, 1322, 1785, 2129, 2239, 2813, 2974
BceAI ACGGC 1 cut(s) 1542
BcgI CGANNNNNNTGC 4 cut(s) 2741, 2775, 3127, 3161
BciT130I CCWGG 2 cut(s) 1569, 2988
BclI TGATCA 1 cut(s) 415
BcnI CCSGG 1 cut(s) 1001
BcoDI GTCTC 4 cut(s) 423, 901, 2797, 2947
BfmI CTRYAG 2 cut(s) 2115, 2936
BfrI CTTAAG 1 cut(s) 2380
BfuAI ACCTGC 1 cut(s) 1875
BglII AGATCT 1 cut(s) 2905
BisI GCNGC 5 cut(s) 480, 2263, 2413, 2656, 2882
BlnI CCTAGG 1 cut(s) 2090
BlsI GCNGC 5 cut(s) 481, 2264, 2414, 2657, 2883
Bme1390I CCNGG 3 cut(s) 1001, 1569, 2988
Bme18I GGWCC 4 cut(s) 130, 237, 1456, 2984
BmeT110I CYCGRG 1 cut(s) 1973
BmgT120I GGNCC 4 cut(s) 130, 237, 1456, 2984
BmiI GGNNCC 4 cut(s) 238, 2286, 2985, 3029
BmrFI CCNGG 3 cut(s) 1001, 1569, 2988
BmrI ACTGGG 2 cut(s) 341, 1603
BmsI GCATC 8 cut(s) 711, 905, 1497, 1591, 1612, 1634, 2284, 3068
BmtI GCTAGC 1 cut(s) 344
BmuI ACTGGG 2 cut(s) 341, 1603
BpiI GAAGAC 2 cut(s) 250, 2038
BplI GAGNNNNNCTC 4 cut(s) 451, 483, 894, 926
BpmI CTGGAG 1 cut(s) 209
Bpu10I CCTNAGC 2 cut(s) 1290, 2258
BpuEI CTTGAG 5 cut(s) 247, 314, 1132, 1153, 2099
BpuMI CCSGG 1 cut(s) 1001
BsaBI GATNNNNATC 3 cut(s) 366, 2550, 3224
BsaI GGTCTC 1 cut(s) 2947
BsaJI CCNNGG 8 cut(s) 232, 864, 1000, 1567, 1741, 2090, 2457, 3032
BsaXI ACNNNNNCTCC 2 cut(s) 1839, 1869
Bsc4I CCNNNNNNNGG 1 cut(s) 1445
Bse1I ACTGG 7 cut(s) 282, 336, 350, 613, 1598, 1805, 2020
Bse21I CCTNAGG 1 cut(s) 2433
Bse3DI GCAATG 1 cut(s) 1401
Bse8I GATNNNNATC 3 cut(s) 366, 2550, 3224
BseBI CCWGG 2 cut(s) 1569, 2988
BseDI CCNNGG 8 cut(s) 232, 864, 1000, 1567, 1741, 2090, 2457, 3032
BseJI GATNNNNATC 3 cut(s) 366, 2550, 3224
BseLI CCNNNNNNNGG 1 cut(s) 1445
BseMI GCAATG 1 cut(s) 1401
BseMII CTCAG 8 cut(s) 1304, 1715, 1897, 1933, 2249, 2521, 3012, 3102
BseNI ACTGG 7 cut(s) 282, 336, 350, 613, 1598, 1805, 2020
BseRI GAGGAG 5 cut(s) 31, 43, 311, 569, 2096
BseSI GKGCMC 2 cut(s) 2515, 2903
BseXI GCAGC 5 cut(s) 466, 2249, 2399, 2667, 2868
BseYI CCCAGC 4 cut(s) 495, 2520, 3160, 3173
BsgI GTGCAG 1 cut(s) 2740
Bsh1236I CGCG 2 cut(s) 115, 1524
BshFI GGCC 2 cut(s) 999, 1431
BsiHKAI GWGCWC 1 cut(s) 2903
BsiHKCI CYCGRG 1 cut(s) 1973
BsiSI CCGG 1 cut(s) 1000
BslFI GGGAC 6 cut(s) 348, 1367, 2189, 2503, 2997, 3177
BslI CCNNNNNNNGG 1 cut(s) 1445
BsmAI GTCTC 4 cut(s) 423, 901, 2797, 2947
BsmBI CGTCTC 1 cut(s) 423
BsmFI GGGAC 6 cut(s) 348, 1367, 2189, 2503, 2997, 3177
BsmI GAATGC 2 cut(s) 675, 2206
BsnI GGCC 2 cut(s) 999, 1431
Bso31I GGTCTC 1 cut(s) 2947
BsoBI CYCGRG 1 cut(s) 1973
Bsp1286I GDGCHC 2 cut(s) 2515, 2903
Bsp1407I TGTACA 1 cut(s) 2693
Bsp19I CCATGG 1 cut(s) 1741
Bsp68I TCGCGA 1 cut(s) 1524
BspACI CCGC 4 cut(s) 193, 223, 275, 2653
BspANI GGCC 2 cut(s) 999, 1431
BspCNI CTCAG 8 cut(s) 1303, 1716, 1896, 1932, 2250, 2520, 3013, 3103
BspFNI CGCG 2 cut(s) 115, 1524
BspHI TCATGA 1 cut(s) 1303
BspLI GGNNCC 4 cut(s) 238, 2286, 2985, 3029
BspMI ACCTGC 1 cut(s) 1875
BspOI GCTAGC 1 cut(s) 344
BspPI GGATC 8 cut(s) 362, 507, 896, 1639, 2279, 2292, 2445, 2589
BspQI GCTCTTC 1 cut(s) 1712
BspTI CTTAAG 1 cut(s) 2380
BspTNI GGTCTC 1 cut(s) 2947
BsrBI CCGCTC 1 cut(s) 193
BsrDI GCAATG 1 cut(s) 1401
BsrGI TGTACA 1 cut(s) 2693
BsrI ACTGG 7 cut(s) 282, 336, 350, 613, 1598, 1805, 2020
BssECI CCNNGG 8 cut(s) 232, 864, 1000, 1567, 1741, 2090, 2457, 3032
BssNAI GTATAC 1 cut(s) 2530
BssSI CACGAG 1 cut(s) 2162
BssT1I CCWWGG 4 cut(s) 232, 1741, 2090, 2457
Bst1107I GTATAC 1 cut(s) 2530
Bst2BI CACGAG 1 cut(s) 2162
Bst2UI CCWGG 2 cut(s) 1569, 2988
Bst4CI ACNGT 8 cut(s) 219, 718, 986, 1483, 1764, 2483, 2630, 3243
Bst6I CTCTTC 3 cut(s) 49, 61, 1712
BstAFI CTTAAG 1 cut(s) 2380
BstAPI GCANNNNNTGC 2 cut(s) 1516, 2497
BstAUI TGTACA 1 cut(s) 2693
BstC8I GCNNGC 6 cut(s) 225, 342, 1122, 2498, 2540, 3096
BstDSI CCRYGG 2 cut(s) 1741, 3032
BstFNI CGCG 2 cut(s) 115, 1524
BstHHI GCGC 2 cut(s) 117, 2747
BstMAI GTCTC 4 cut(s) 423, 901, 2797, 2947
BstMWI GCNNNNNNNGC 9 cut(s) 35, 1005, 1507, 1516, 2497, 2502, 2646, 2655, 3135
BstNI CCWGG 2 cut(s) 1569, 2988
BstNSI RCATGY 1 cut(s) 1124
BstSCI CCNGG 3 cut(s) 999, 1567, 2986
BstSFI CTRYAG 2 cut(s) 2115, 2936
BstSLI GKGCMC 2 cut(s) 2515, 2903
BstUI CGCG 2 cut(s) 115, 1524
BstV1I GCAGC 5 cut(s) 466, 2249, 2399, 2667, 2868
BstV2I GAAGAC 2 cut(s) 250, 2038
BstX2I RGATCY 6 cut(s) 499, 1631, 2284, 2437, 2581, 2905
BstXI CCANNNNNNTGG 1 cut(s) 2027
BstYI RGATCY 6 cut(s) 499, 1631, 2284, 2437, 2581, 2905
BstZ17I GTATAC 1 cut(s) 2530
Bsu36I CCTNAGG 1 cut(s) 2433
BsuRI GGCC 2 cut(s) 999, 1431
BtgI CCRYGG 2 cut(s) 1741, 3032
BtsI GCAGTG 3 cut(s) 2211, 2757, 2910
BtuMI TCGCGA 1 cut(s) 1524
BveI ACCTGC 1 cut(s) 1875
Cac8I GCNNGC 6 cut(s) 225, 342, 1122, 2498, 2540, 3096
CaiI CAGNNNCTG 1 cut(s) 3131
CciI TCATGA 1 cut(s) 1303
CfoI GCGC 2 cut(s) 117, 2747
Cfr13I GGNCC 4 cut(s) 130, 237, 1456, 2984
CseI GACGC 1 cut(s) 2887
CsiI ACCWGGT 1 cut(s) 2986
Csp6I GTAC 1 cut(s) 2694
CviQI GTAC 1 cut(s) 2694
DraI TTTAAA 2 cut(s) 1129, 1680
DrdI GACNNNNNNGTC 1 cut(s) 2188
DseDI GACNNNNNNGTC 1 cut(s) 2188
EaeI YGGCCR 1 cut(s) 997
Eam1104I CTCTTC 3 cut(s) 49, 61, 1712
EarI CTCTTC 3 cut(s) 49, 61, 1712
Eco130I CCWWGG 4 cut(s) 232, 1741, 2090, 2457
Eco31I GGTCTC 1 cut(s) 2947
Eco47I GGWCC 4 cut(s) 130, 237, 1456, 2984
Eco57I CTGAAG 4 cut(s) 82, 357, 495, 2753
Eco81I CCTNAGG 1 cut(s) 2433
Eco88I CYCGRG 1 cut(s) 1973
EcoO109I RGGNCCY 2 cut(s) 1456, 2984
EcoRI GAATTC 1 cut(s) 1449
EcoRII CCWGG 2 cut(s) 1567, 2986
EcoT14I CCWWGG 4 cut(s) 232, 1741, 2090, 2457
EcoT22I ATGCAT 2 cut(s) 1512, 1627
ErhI CCWWGG 4 cut(s) 232, 1741, 2090, 2457
Esp3I CGTCTC 1 cut(s) 423
FalI AAGNNNNNCTT 6 cut(s) 1143, 1175, 2032, 2064, 2437, 2469
FaqI GGGAC 6 cut(s) 348, 1367, 2189, 2503, 2997, 3177
FauI CCCGC 2 cut(s) 186, 216
FbaI TGATCA 1 cut(s) 415
FblI GTMKAC 5 cut(s) 948, 2192, 2333, 2529, 3238
Fnu4HI GCNGC 5 cut(s) 480, 2263, 2413, 2656, 2882
Fsp4HI GCNGC 5 cut(s) 480, 2263, 2413, 2656, 2882
GlaI GCGC 2 cut(s) 116, 2746
GluI GCNGC 5 cut(s) 480, 2263, 2413, 2656, 2882
GsaI CCCAGC 4 cut(s) 499, 2524, 3164, 3177
GsuI CTGGAG 1 cut(s) 209
HaeIII GGCC 2 cut(s) 999, 1431
HapII CCGG 1 cut(s) 1000
HgaI GACGC 1 cut(s) 2887
HhaI GCGC 2 cut(s) 117, 2747
Hin6I GCGC 2 cut(s) 115, 2745
HinP1I GCGC 2 cut(s) 115, 2745
HincII GTYRAC 3 cut(s) 880, 949, 2334
HindII GTYRAC 3 cut(s) 880, 949, 2334
HindIII AAGCTT 2 cut(s) 759, 2666
HpaII CCGG 1 cut(s) 1000
HphI GGTGA 3 cut(s) 1093, 1938, 2009
Hpy166II GTNNAC 8 cut(s) 880, 949, 2017, 2193, 2334, 2530, 2901, 3239
Hpy8I GTNNAC 8 cut(s) 880, 949, 2017, 2193, 2334, 2530, 2901, 3239
Hpy99I CGWCG 1 cut(s) 935
HpyCH4III ACNGT 8 cut(s) 219, 718, 986, 1483, 1764, 2483, 2630, 3243
HpyCH4IV ACGT 2 cut(s) 1468, 1890
HpyF10VI GCNNNNNNNGC 9 cut(s) 35, 1005, 1507, 1516, 2497, 2502, 2646, 2655, 3135
HpySE526I ACGT 2 cut(s) 1468, 1890
HspAI GCGC 2 cut(s) 115, 2745
Ksp22I TGATCA 1 cut(s) 415
LguI GCTCTTC 1 cut(s) 1712
LmnI GCTCC 5 cut(s) 190, 298, 958, 2083, 2876
Lsp1109I GCAGC 5 cut(s) 466, 2249, 2399, 2667, 2868
LweI GCATC 8 cut(s) 711, 905, 1497, 1591, 1612, 1634, 2284, 3068
MabI ACCWGGT 1 cut(s) 2986
MaeII ACGT 2 cut(s) 1468, 1890
MaeIII GTNAC 7 cut(s) 986, 1477, 1559, 2483, 2610, 3011, 3076
MbiI CCGCTC 1 cut(s) 193
MfeI CAATTG 4 cut(s) 962, 2003, 2407, 3139
MflI RGATCY 6 cut(s) 499, 1631, 2284, 2437, 2581, 2905
MhlI GDGCHC 2 cut(s) 2515, 2903
MlyI GAGTC 7 cut(s) 611, 903, 983, 1101, 1644, 2028, 2599
MmeI TCCRAC 2 cut(s) 634, 2775
Mph1103I ATGCAT 2 cut(s) 1512, 1627
MroXI GAANNNNTTC 1 cut(s) 1808
MslI CAYNNNNRTG 1 cut(s) 2619
MspA1I CMGCKG 3 cut(s) 515, 1501, 1995
MspCI CTTAAG 1 cut(s) 2380
MspI CCGG 1 cut(s) 1000
MspR9I CCNGG 3 cut(s) 1001, 1569, 2988
MunI CAATTG 4 cut(s) 962, 2003, 2407, 3139
Mva1269I GAATGC 2 cut(s) 675, 2206
MvaI CCWGG 2 cut(s) 1569, 2988
MvnI CGCG 2 cut(s) 115, 1524
MwoI GCNNNNNNNGC 9 cut(s) 35, 1005, 1507, 1516, 2497, 2502, 2646, 2655, 3135
NciI CCSGG 1 cut(s) 1001
NcoI CCATGG 1 cut(s) 1741
NheI GCTAGC 1 cut(s) 340
NlaIV GGNNCC 4 cut(s) 238, 2286, 2985, 3029
NmuCI GTSAC 3 cut(s) 986, 1559, 3011
NruI TCGCGA 1 cut(s) 1524
NsiI ATGCAT 2 cut(s) 1512, 1627
NspI RCATGY 1 cut(s) 1124
PaeI GCATGC 1 cut(s) 1124
PaeR7I CTCGAG 1 cut(s) 1973
PagI TCATGA 1 cut(s) 1303
PaqCI CACCTGC 1 cut(s) 1875
PciSI GCTCTTC 1 cut(s) 1712
PctI GAATGC 2 cut(s) 675, 2206
PdmI GAANNNNTTC 1 cut(s) 1808
PflFI GACNNNGTC 1 cut(s) 1403
PkrI GCNGC 5 cut(s) 481, 2264, 2414, 2657, 2883
PleI GAGTC 7 cut(s) 611, 903, 983, 1101, 1644, 2028, 2598
PpsI GAGTC 7 cut(s) 611, 903, 983, 1101, 1644, 2028, 2598
PpuMI RGGWCCY 2 cut(s) 1456, 2984
PsiI TTATAA 2 cut(s) 1019, 2420
Psp1406I AACGTT 1 cut(s) 1468
Psp5II RGGWCCY 2 cut(s) 1456, 2984
Psp6I CCWGG 2 cut(s) 1567, 2986
PspFI CCCAGC 4 cut(s) 495, 2520, 3160, 3173
PspGI CCWGG 2 cut(s) 1567, 2986
PspN4I GGNNCC 4 cut(s) 238, 2286, 2985, 3029
PspPI GGNCC 4 cut(s) 130, 237, 1456, 2984
PspPPI RGGWCCY 2 cut(s) 1456, 2984
PsrI GAACNNNNNNTAC 2 cut(s) 454, 486
PstNI CAGNNNCTG 1 cut(s) 3131
PsuI RGATCY 6 cut(s) 499, 1631, 2284, 2437, 2581, 2905
PsyI GACNNNGTC 1 cut(s) 1403
PvuII CAGCTG 3 cut(s) 515, 1501, 1995
RruI TCGCGA 1 cut(s) 1524
RsaI GTAC 1 cut(s) 2695
RsaNI GTAC 1 cut(s) 2694
RseI CAYNNNNRTG 1 cut(s) 2619
SalI GTCGAC 2 cut(s) 947, 2332
SapI GCTCTTC 1 cut(s) 1712
SatI GCNGC 5 cut(s) 480, 2263, 2413, 2656, 2882
Sau96I GGNCC 4 cut(s) 130, 237, 1456, 2984
SchI GAGTC 7 cut(s) 611, 903, 983, 1101, 1644, 2028, 2599
ScrFI CCNGG 3 cut(s) 1001, 1569, 2988
SduI GDGCHC 2 cut(s) 2515, 2903
SexAI ACCWGGT 1 cut(s) 2986
SfaNI GCATC 8 cut(s) 711, 905, 1497, 1591, 1612, 1634, 2284, 3068
SfcI CTRYAG 2 cut(s) 2115, 2936
Sfr274I CTCGAG 1 cut(s) 1973
SinI GGWCC 4 cut(s) 130, 237, 1456, 2984
SlaI CTCGAG 1 cut(s) 1973
SmiMI CAYNNNNRTG 1 cut(s) 2619
SmlI CTYRAG 7 cut(s) 262, 293, 1111, 1168, 1973, 2078, 2380
SmoI CTYRAG 7 cut(s) 262, 293, 1111, 1168, 1973, 2078, 2380
SphI GCATGC 1 cut(s) 1124
SsiI CCGC 4 cut(s) 193, 223, 275, 2653
SspI AATATT 1 cut(s) 1416
StyD4I CCNGG 3 cut(s) 999, 1567, 2986
StyI CCWWGG 4 cut(s) 232, 1741, 2090, 2457
TaaI ACNGT 8 cut(s) 219, 718, 986, 1483, 1764, 2483, 2630, 3243
TaiI ACGT 2 cut(s) 1471, 1893
TaqI TCGA 5 cut(s) 948, 1797, 1974, 2333, 3147
TatI WGTACW 1 cut(s) 2693
TseFI GTSAC 3 cut(s) 986, 1559, 3011
TseI GCWGC 5 cut(s) 479, 2262, 2412, 2655, 2881
Tsp45I GTSAC 3 cut(s) 986, 1559, 3011
TspGWI ACGGA 4 cut(s) 143, 1535, 2078, 2359
Tth111I GACNNNGTC 1 cut(s) 1403
Vha464I CTTAAG 1 cut(s) 2380
VneI GTGCAC 1 cut(s) 2899
VpaK11BI GGWCC 4 cut(s) 130, 237, 1456, 2984
XbaI TCTAGA 3 cut(s) 1657, 1816, 2815
XceI RCATGY 1 cut(s) 1124
XcmI CCANNNNNNNNNTGG 1 cut(s) 3115
XhoI CTCGAG 1 cut(s) 1973
XmaJI CCTAGG 1 cut(s) 2090
XmiI GTMKAC 5 cut(s) 948, 2192, 2333, 2529, 3238
XmnI GAANNNNTTC 1 cut(s) 1808
Zsp2I ATGCAT 2 cut(s) 1512, 1627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.