FvH4_5g32990

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
23811224 .. 23817872
6649 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g32990.t1

Sequence Viewer

Length: 3600 bp
ATGGAATTAATCAACGACTTTTATACCAAGCCTTGCCCCTTTTATTCAGTCTTTGCAGGTCTTCTCTTGCAAAAACTAGAAATGGCTAAAAGAAAAGCTCAAGGATCTCTGTCTTCGTCTTCCTCAAAACCAAGACATTGGATGTACGACGTGTTCTTGAGCTTCAGAGGCGAAGACACACGTAACACCTTCACCGGCCACCTCTACGCGGCGCTGAAACAGGCCGGAGTCAATGCCTTCATTGACGACAACGAACTCAGAAGAGGGGAAGACATAACGGCCGAACTCGTGCGGGCCATCCAAGGGTCGAGAATCGCCGTGATTGTGTTCTCGAAGAGGTATGCGGATTCGAGTTGGTGTCTGGAGGAGTTGGTCAAGATCATGGAGTGTAGAAGAACACTAAGGCAAATGGTGTTCCCAGTTTTCGTTGACGTTGATCCTTCCAATGTGAGAAGACAGATTGGTAGTTTCGCAGAAGCGTTTCGGAAACATGAACAGAGGTTAGTGTTGGAGAAGGAAAAGGTACTCAGGTGGAGAGCTGCTCTTACTGAAGCTGCAAATTTGTCTGGCTGGGATCTGAATAACACTGCAAATGGGCATGAAGCAAAGTTTATCAGCAAAATTGTTACGGAGATAACTAGGCACTTGAACAACACATACCTATATGAAGCGGTCTACCCGGTAGGAATCGATTCTCGGGTGAAAGAAATGAGTAAGCATTTAGGTGATAAGCTAGATGATGTTAGAATGATTGGAATTTTGGGTATGGGTGGGATAGGGAAAACAACTATTGCCAAAGCCATATACAACAAATTTTGTGATAGCTTTGAAGGTGCTAGTTTTCTGGCAAATGTTAGGGAAACTACAAAACAACCGAATGGGCATGTTCGTTTGCAAGAACAGCTTCTTTGTGATGTCTTGAAAACAACCAAGATAAAGGTCGGAAGTGTTGATAGAGGGATCAATATGATAAAAGAAAGACTTCGATGTAGAAGGGTACTTGTCATAATCGATGATATAGATCAACTAGACCAGCAATATGCAATAGCTGGAAGCAGTGACTGGTTTGGTTTAGGAAGTAGAATTGTTGTCACAACCCGAGATGAACATCTGCTAAAGCAACTTAACGTGGATTCAATATATCTGGCTCCAGAAATGAATGAAACAGAGGCTCTTGAACTCTTTAGTTGGCATGCCTTCAGAAGTAGTCATCCTGATAAAGAACATTCTGAACTTTCAAGTAGTATAGTTGCTTGCTATGGAGGCTTGCCACTAGCTCTTGAAGTTTTAGGATCTTTTCTGTTTGGAAGAAGCATAGCTGAGTGGAAAAGTGCACTGGATAAATGGAAGACAATTCCTCCTGGCCAAATTCAGGAAAAGCTCAGAGTAAGCTTTGACGGACTAAACGATGATACAGAGAAGAATATATTTCTTGACATATCTTGTTTCTTTATAGGAATGGACAAGAAACATGTCAGTCAAATATTGGATGGTTGTGGGTTTTTTGCAGAAATAGGAATCACTGTCCTCCTTGAGCGACGCCTTGTAACTGTATGTGAAAAGAACAAGCTGATGGTGCATGATTTGCTTCGAGACATGGGCAGAGAAATTGTTCGTGCAAAGTCCCCCAGTGACCCTGGAAAGCGTAGTAGATTGTGGCATCCTACAGATGTAACAGATGTATTGACAGAACATTCTGGAACTGAAGATATTCAAGGGCTCACTCTAAGTTTGCTAGAATCCAATGAGACTAGTTTCAGCACACAAGCATTTGCAAATATGAAAAGATTAAGATTGCTCCAACTCAAATTCGTGCAGCTCAGTGGAGGCTATGAGCATCTTTCTAACTCGTTAAGGTGGCTGTGCTGGCGTGGATTCCCTCTTAAGTTCCTACCAAACAACTTTAATTTACCACATGTGGTTTCTATTGACCTGCGATATAGCAAACTTGTACAAGCTTGGACTGAATCTAGGATGCTTAAGAAGCTGAAGATTCTAAATCTCAGTCATTCCCATTACTTGAGACAATCACCAGACTTTTCAAAACTTCCTAAGCTCGAGAAGTTGATACTCAAAGGCTGTAAGAGTTTGTCCGAGGTTCACCAGACCATTGGAGATCTTGAAGGACTTGCTTTGGTAAATCTTCAAGACTGTAAGATGCTCAGGGAGCTCCCAGTGACTTTCTCCAAGTTGAAAGGTATTGAAACTCTTATTCTTTCTGGCTGTTCAAAATTTGAAAAGTTGACTAAGGACTTAGGTGAGATGGTATCCTTGAGAACTCTGCTAGCAGATGACACAGCCATAAGAGAAATACCATCTTCCATAACAAAGTTGAAGAACCTAGAACGTTTATCTTTATGTGGCCTGAAACAACCACCATCAAACTTGTTTCCAACTCGCTTCTGGTCTTTTCTGTTGCCAAGAAGATATGTAAAATTCCCTCCATCATTATTTGGTTTGGGGGCTTTGAAAGAACTGTATCTTAGAGACTGCAATTTAACTGATGGTTCAATTCCCAAGGGTATTGGGAGTCTATCAGCTTTGGAAGAATTGGATCTTGGAGGAAACTCTTTTGGTAGCCTTCCATGTCTTGGTGGACTTTCCAAGCTTCAATATCTCACATTGGATGGTTGCAATTTAACTGATGCTGCAATTGAAACTACGAACTTTTGGAGTCTGCCATCTCTGGATTATTTGGATCTAAGTGGCAATAGTTTCCATAGGCTTCCAAGCCTCAGGGGACTTTCTGAGCTAGTCACTCTAATTTTAAATAATTGCACAAACCTCTATGCAATCCCAGAACTACCCCCAACACGTTTGGCGGTGCTGAGTGCAGATGGTTGCACTGCACTGGAAAGAATGCCGAATCTTTCTGAAATGAAGACCTTGTCTAAGTTGAATCTCAGAGATTCTCCTAAACTAACTGAGATTCCCGGCTTGGATAAGCCATCCAATTTTATGCTACAAATTCAAATGGAAGGGTGCACTAATATCAGTGAAACTGTTAAGGAGAGCATACTACTACAGGGATGGAGTTATGCTAGCAACTTTGGTGGCATTTATCTCCCAGGAACTGACATTCCTGAGTGGTTTACATATGTTGCTGATGGTGGCCGTGTCTCTTTTCAAGTGCCTCAAACTGTTGGCTGTGACCTGAAAGGGTTGACCCTGTGCATCATTTATTCTAGTTTTTCGAACAGTCAATCTATAAATAATATTTCCGTATTTGTTATAAATCATACCAAGCTCACCAGTTTTTGGGTTCAACCGTCGTCACCGCAGAACATTATTTCCAGTGGAGTTCTTTGGCAGGGACGCTTGTCAAACAGAACGATCAATTTGGAAGGCGGAGACTTCGTAGAGGTTTGTGTAGCAATTGGTTCTTGCTTCGAAGTGAGTAAAATAGGGGTCAATCTTGTATTGGAAGAATATATCTCAATAGATGTGCATGAGTTTGAGTCTTTCCCATATCCTTATTTTCGTCAAGACAAATATGATGAGGGAGAAATTACATCCAAAAGAGATCTTGCTGATAATGTGGCAGGACCAAGCCATCACTCATCTGATTCCAGTAGTGAAATGAGTACAGATGAAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1200

Amino Acids

134.69

Weight (kDa)

6.61

Isoelectric Point (pI)

44.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 49 - 220 1.7e-56 TIR domain
TIR_2 PF13676 51 - 148 5.6e-18 TIR domain
NB-ARC PF00931 234 - 402 2.3e-16 NB-ARC domain
WHD_ROQ1 PF23282 472 - 542 1.5e-17 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 737 - 875 3.4e-08 Leucine-rich repeat region
LRR_8 PF13855 823 - 880 1.1e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3233
Acc36I ACCTGC 2 cut(s) 47, 1941
AccB7I CCANNNNNTGG 2 cut(s) 2591, 3258
AccI GTMKAC 1 cut(s) 675
AccII CGCG 1 cut(s) 209
AciI CCGC 7 cut(s) 209, 292, 344, 671, 2822, 3278, 3348
AclI AACGTT 1 cut(s) 2347
AclWI GGATC 7 cut(s) 112, 431, 582, 968, 1300, 2562, 2706
AcoI YGGCCR 4 cut(s) 196, 279, 1363, 3112
AcsI RAATTY 8 cut(s) 559, 756, 812, 1368, 1808, 2231, 2435, 2967
AcuI CTGAAG 5 cut(s) 148, 570, 1183, 1725, 2009
AcyI GRCGYC 1 cut(s) 1540
AfaI GTAC 5 cut(s) 146, 525, 999, 1953, 3586
AfiI CCNNNNNNNGG 5 cut(s) 208, 303, 1372, 2591, 3258
AflII CTTAAG 2 cut(s) 1883, 1979
AflIII ACRYGT 5 cut(s) 150, 179, 1471, 1915, 2813
AhlI ACTAGT 1 cut(s) 1751
AjiI CACGTC 1 cut(s) 151
AjnI CCWGG 3 cut(s) 1360, 1636, 3067
AjuI GAANNNNNNNTTGG 2 cut(s) 2541, 2573
AloI GAACNNNNNNTCC 4 cut(s) 3064, 3096, 3275, 3307
Alw21I GWGCWC 3 cut(s) 1336, 2172, 2987
Alw26I GTCTC 6 cut(s) 1587, 1742, 2017, 2481, 3124, 3345
Alw44I GTGCAC 2 cut(s) 1332, 2983
AlwI GGATC 7 cut(s) 112, 431, 582, 968, 1300, 2562, 2706
AlwNI CAGNNNCTG 2 cut(s) 1062, 3074
Ama87I CYCGRG 3 cut(s) 696, 1098, 2057
AoxI GGCC 7 cut(s) 196, 222, 279, 294, 1363, 2362, 3112
ApaLI GTGCAC 2 cut(s) 1332, 2983
ApeKI GCWGC 4 cut(s) 539, 554, 1816, 2648
ApoI RAATTY 8 cut(s) 559, 756, 812, 1368, 1808, 2231, 2435, 2967
AseI ATTAAT 1 cut(s) 8
Asp700I GAANNNNTTC 6 cut(s) 480, 691, 903, 981, 1611, 1710
AspLEI GCGC 1 cut(s) 214
AspS9I GGNCC 2 cut(s) 294, 3545
AsuC2I CCSGG 2 cut(s) 680, 2934
AsuHPI GGTGA 8 cut(s) 184, 712, 737, 2022, 2093, 2270, 3241, 3267
AsuII TTCGAA 2 cut(s) 3194, 3390
AsuNHI GCTAGC 2 cut(s) 2284, 3041
AvaI CYCGRG 3 cut(s) 696, 1098, 2057
AvaII GGWCC 1 cut(s) 3545
AxyI CCTNAGG 1 cut(s) 2735
BaeGI GKGCMC 2 cut(s) 1336, 2987
BaeI ACNNNNGTAYC 2 cut(s) 515, 548
BalI TGGCCA 1 cut(s) 1365
BanII GRGCYC 2 cut(s) 1722, 2172
BauI CACGAG 1 cut(s) 287
BbsI GAAGAC 8 cut(s) 53, 105, 111, 180, 276, 460, 1355, 2888
Bbv12I GWGCWC 3 cut(s) 1336, 2172, 2987
BbvI GCAGC 4 cut(s) 526, 541, 1828, 2635
BceAI ACGGC 3 cut(s) 294, 302, 3099
BciT130I CCWGG 3 cut(s) 1362, 1638, 3069
BciVI GTATCC 1 cut(s) 2278
BcnI CCSGG 2 cut(s) 680, 2934
BcoDI GTCTC 6 cut(s) 1587, 1742, 2017, 2481, 3124, 3345
BcuI ACTAGT 1 cut(s) 1751
BfmI CTRYAG 2 cut(s) 1665, 3023
BfoI RGCGCY 1 cut(s) 215
BfrI CTTAAG 2 cut(s) 1883, 1979
BfuAI ACCTGC 2 cut(s) 47, 1941
BfuI GTATCC 1 cut(s) 2278
BglII AGATCT 2 cut(s) 2116, 3523
BisI GCNGC 5 cut(s) 210, 540, 555, 1817, 2649
BlsI GCNGC 5 cut(s) 211, 541, 556, 1818, 2650
Bme1390I CCNGG 5 cut(s) 680, 1362, 1638, 2934, 3069
Bme18I GGWCC 1 cut(s) 3545
BmeT110I CYCGRG 3 cut(s) 696, 1098, 2057
BmgBI CACGTC 1 cut(s) 151
BmgT120I GGNCC 2 cut(s) 294, 3545
BmiI GGNNCC 1 cut(s) 1149
BmrFI CCNGG 5 cut(s) 680, 1362, 1638, 2934, 3069
BmrI ACTGGG 3 cut(s) 413, 1623, 2168
BmsI GCATC 6 cut(s) 1669, 1846, 1965, 2148, 2635, 3183
BmtI GCTAGC 2 cut(s) 2288, 3045
BmuI ACTGGG 3 cut(s) 413, 1623, 2168
BoxI GACNNNNGTC 1 cut(s) 3319
BpiI GAAGAC 8 cut(s) 53, 105, 111, 180, 276, 460, 1355, 2888
BplI GAGNNNNNCTC 2 cut(s) 526, 558
BpmI CTGGAG 2 cut(s) 383, 1134
Bpu10I CCTNAGC 2 cut(s) 2052, 2162
Bpu14I TTCGAA 2 cut(s) 3194, 3390
BpuEI CTTGAG 5 cut(s) 84, 178, 1553, 2041, 2293
BpuMI CCSGG 2 cut(s) 680, 2934
Bsa29I ATCGAT 2 cut(s) 690, 1011
BsaAI YACGTR 1 cut(s) 182
BsaBI GATNNNNATC 2 cut(s) 1020, 1107
BsaHI GRCGYC 1 cut(s) 1540
BsaJI CCNNGG 5 cut(s) 301, 1636, 2094, 2517, 3067
BsaXI ACNNNNNCTCC 4 cut(s) 1342, 1372, 3342, 3372
Bsc4I CCNNNNNNNGG 5 cut(s) 208, 303, 1372, 2591, 3258
Bse118I RCCGGY 1 cut(s) 194
Bse1I ACTGG 9 cut(s) 419, 1067, 1341, 1629, 2174, 2856, 3252, 3294, 3570
Bse21I CCTNAGG 1 cut(s) 2735
Bse8I GATNNNNATC 2 cut(s) 1020, 1107
BseBI CCWGG 3 cut(s) 1362, 1638, 3069
BseCI ATCGAT 2 cut(s) 690, 1011
BseDI CCNNGG 5 cut(s) 301, 1636, 2094, 2517, 3067
BseJI GATNNNNATC 2 cut(s) 1020, 1107
BseLI CCNNNNNNNGG 5 cut(s) 208, 303, 1372, 2591, 3258
BseNI ACTGG 9 cut(s) 419, 1067, 1341, 1629, 2174, 2856, 3252, 3294, 3570
BseRI GAGGAG 1 cut(s) 380
BseSI GKGCMC 2 cut(s) 1336, 2987
BseX3I CGGCCG 1 cut(s) 279
BseXI GCAGC 4 cut(s) 526, 541, 1828, 2635
BseYI CCCAGC 1 cut(s) 570
BsgI GTGCAG 3 cut(s) 1835, 2832, 2853
Bsh1236I CGCG 1 cut(s) 209
Bsh1285I CGRYCG 1 cut(s) 282
BshFI GGCC 7 cut(s) 198, 224, 281, 296, 1365, 2364, 3114
BshVI ATCGAT 2 cut(s) 690, 1011
BsiEI CGRYCG 1 cut(s) 282
BsiHKAI GWGCWC 3 cut(s) 1336, 2172, 2987
BsiHKCI CYCGRG 3 cut(s) 696, 1098, 2057
BsiSI CCGG 4 cut(s) 195, 225, 680, 2934
BslFI GGGAC 3 cut(s) 1609, 2754, 3327
BslI CCNNNNNNNGG 5 cut(s) 208, 303, 1372, 2591, 3258
BsmAI GTCTC 6 cut(s) 1587, 1742, 2017, 2481, 3124, 3345
BsmFI GGGAC 3 cut(s) 1609, 2754, 3327
BsmI GAATGC 1 cut(s) 2865
BsnI GGCC 7 cut(s) 198, 224, 281, 296, 1365, 2364, 3114
BsoBI CYCGRG 3 cut(s) 696, 1098, 2057
Bsp119I TTCGAA 2 cut(s) 3194, 3390
Bsp1286I GDGCHC 4 cut(s) 1336, 1722, 2172, 2987
Bsp1407I TGTACA 1 cut(s) 1951
BspACI CCGC 7 cut(s) 209, 292, 344, 671, 2822, 3278, 3348
BspANI GGCC 7 cut(s) 198, 224, 281, 296, 1365, 2364, 3114
BspDI ATCGAT 2 cut(s) 690, 1011
BspFNI CGCG 1 cut(s) 209
BspLI GGNNCC 1 cut(s) 1149
BspMI ACCTGC 2 cut(s) 47, 1941
BspOI GCTAGC 2 cut(s) 2288, 3045
BspPI GGATC 7 cut(s) 112, 431, 582, 968, 1300, 2562, 2706
BspT104I TTCGAA 2 cut(s) 3194, 3390
BspTI CTTAAG 2 cut(s) 1883, 1979
BsrFI RCCGGY 1 cut(s) 194
BsrGI TGTACA 1 cut(s) 1951
BsrI ACTGG 9 cut(s) 419, 1067, 1341, 1629, 2174, 2856, 3252, 3294, 3570
BssAI RCCGGY 1 cut(s) 194
BssECI CCNNGG 5 cut(s) 301, 1636, 2094, 2517, 3067
BssNI GRCGYC 1 cut(s) 1540
BssSI CACGAG 1 cut(s) 287
BssT1I CCWWGG 2 cut(s) 301, 2517
Bst2BI CACGAG 1 cut(s) 287
Bst2UI CCWGG 3 cut(s) 1362, 1638, 3069
Bst4CI ACNGT 8 cut(s) 1525, 1552, 2153, 2478, 3004, 3142, 3200, 3270
Bst6I CTCTTC 2 cut(s) 256, 329
BstACI GRCGYC 1 cut(s) 1540
BstAFI CTTAAG 2 cut(s) 1883, 1979
BstAPI GCANNNNNTGC 1 cut(s) 1585
BstAUI TGTACA 1 cut(s) 1951
BstBAI YACGTR 1 cut(s) 182
BstBI TTCGAA 2 cut(s) 3194, 3390
BstC8I GCNNGC 7 cut(s) 294, 1194, 1255, 1268, 1868, 2286, 3043
BstFNI CGCG 1 cut(s) 209
BstH2I RGCGCY 1 cut(s) 215
BstHHI GCGC 1 cut(s) 214
BstMAI GTCTC 6 cut(s) 1587, 1742, 2017, 2481, 3124, 3345
BstMCI CGRYCG 1 cut(s) 282
BstMWI GCNNNNNNNGC 8 cut(s) 168, 901, 1263, 1576, 1585, 1867, 1984, 2167
BstNI CCWGG 3 cut(s) 1362, 1638, 3069
BstNSI RCATGY 4 cut(s) 887, 1196, 1475, 1919
BstPAI GACNNNNGTC 1 cut(s) 3319
BstSCI CCNGG 5 cut(s) 678, 1360, 1636, 2932, 3067
BstSFI CTRYAG 2 cut(s) 1665, 3023
BstSLI GKGCMC 2 cut(s) 1336, 2987
BstUI CGCG 1 cut(s) 209
BstV1I GCAGC 4 cut(s) 526, 541, 1828, 2635
BstV2I GAAGAC 8 cut(s) 53, 105, 111, 180, 276, 460, 1355, 2888
BstX2I RGATCY 7 cut(s) 104, 574, 1292, 2116, 2554, 2698, 3523
BstXI CCANNNNNNTGG 2 cut(s) 138, 2111
BstYI RGATCY 7 cut(s) 104, 574, 1292, 2116, 2554, 2698, 3523
BstZI CGGCCG 1 cut(s) 279
Bsu15I ATCGAT 2 cut(s) 690, 1011
Bsu36I CCTNAGG 1 cut(s) 2735
BsuI GTATCC 1 cut(s) 2278
BsuRI GGCC 7 cut(s) 198, 224, 281, 296, 1365, 2364, 3114
BsuTUI ATCGAT 2 cut(s) 690, 1011
BtrI CACGTC 1 cut(s) 151
BtsI GCAGTG 3 cut(s) 585, 1063, 2844
BveI ACCTGC 2 cut(s) 47, 1941
Cac8I GCNNGC 7 cut(s) 294, 1194, 1255, 1268, 1868, 2286, 3043
CaiI CAGNNNCTG 2 cut(s) 1062, 3074
CfoI GCGC 1 cut(s) 214
Cfr10I RCCGGY 1 cut(s) 194
Cfr13I GGNCC 2 cut(s) 294, 3545
ClaI ATCGAT 2 cut(s) 690, 1011
CseI GACGC 2 cut(s) 1548, 3324
Csp6I GTAC 5 cut(s) 145, 524, 998, 1952, 3585
CspCI CAANNNNNGTGG 2 cut(s) 3034, 3069
CviQI GTAC 5 cut(s) 145, 524, 998, 1952, 3585
DraI TTTAAA 1 cut(s) 2769
EaeI YGGCCR 4 cut(s) 196, 279, 1363, 3112
EagI CGGCCG 1 cut(s) 279
Eam1104I CTCTTC 2 cut(s) 256, 329
EarI CTCTTC 2 cut(s) 256, 329
EciI GGCGGA 1 cut(s) 3363
Ecl136II GAGCTC 1 cut(s) 2170
EclXI CGGCCG 1 cut(s) 279
Eco130I CCWWGG 2 cut(s) 301, 2517
Eco24I GRGCYC 2 cut(s) 1722, 2172
Eco47I GGWCC 1 cut(s) 3545
Eco52I CGGCCG 1 cut(s) 279
Eco53kI GAGCTC 1 cut(s) 2170
Eco57I CTGAAG 5 cut(s) 148, 570, 1183, 1725, 2009
Eco81I CCTNAGG 1 cut(s) 2735
Eco88I CYCGRG 3 cut(s) 696, 1098, 2057
EcoICRI GAGCTC 1 cut(s) 2170
EcoRII CCWGG 3 cut(s) 1360, 1636, 3067
EcoT14I CCWWGG 2 cut(s) 301, 2517
EcoT38I GRGCYC 2 cut(s) 1722, 2172
ErhI CCWWGG 2 cut(s) 301, 2517
FalI AAGNNNNNCTT 4 cut(s) 888, 920, 966, 998
FaqI GGGAC 3 cut(s) 1609, 2754, 3327
FauI CCCGC 1 cut(s) 285
FauNDI CATATG 1 cut(s) 3097
FblI GTMKAC 1 cut(s) 675
Fnu4HI GCNGC 5 cut(s) 210, 540, 555, 1817, 2649
FriOI GRGCYC 2 cut(s) 1722, 2172
Fsp4HI GCNGC 5 cut(s) 210, 540, 555, 1817, 2649
GlaI GCGC 1 cut(s) 213
GluI GCNGC 5 cut(s) 210, 540, 555, 1817, 2649
GsaI CCCAGC 1 cut(s) 574
GsuI CTGGAG 2 cut(s) 383, 1134
HaeII RGCGCY 1 cut(s) 215
HaeIII GGCC 7 cut(s) 198, 224, 281, 296, 1365, 2364, 3114
HapII CCGG 4 cut(s) 195, 225, 680, 2934
HgaI GACGC 2 cut(s) 1548, 3324
HhaI GCGC 1 cut(s) 214
Hin1I GRCGYC 1 cut(s) 1540
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HincII GTYRAC 3 cut(s) 430, 2244, 3165
HindII GTYRAC 3 cut(s) 430, 2244, 3165
HindIII AAGCTT 3 cut(s) 1390, 1956, 2606
HpaII CCGG 4 cut(s) 195, 225, 680, 2934
HphI GGTGA 8 cut(s) 184, 712, 737, 2022, 2093, 2270, 3241, 3267
Hpy166II GTNNAC 9 cut(s) 430, 676, 1334, 2101, 2244, 2597, 2985, 3093, 3165
Hpy8I GTNNAC 9 cut(s) 430, 676, 1334, 2101, 2244, 2597, 2985, 3093, 3165
Hpy99I CGWCG 3 cut(s) 152, 1542, 3274
HpyCH4III ACNGT 8 cut(s) 1525, 1552, 2153, 2478, 3004, 3142, 3200, 3270
HpyCH4IV ACGT 6 cut(s) 150, 181, 432, 1128, 2347, 2815
HpyF10VI GCNNNNNNNGC 8 cut(s) 168, 901, 1263, 1576, 1585, 1867, 1984, 2167
HpySE526I ACGT 6 cut(s) 150, 181, 432, 1128, 2347, 2815
Hsp92I GRCGYC 1 cut(s) 1540
HspAI GCGC 1 cut(s) 212
LmnI GCTCC 4 cut(s) 1153, 1803, 2167, 2175
Lsp1109I GCAGC 4 cut(s) 526, 541, 1828, 2635
LweI GCATC 6 cut(s) 1669, 1846, 1965, 2148, 2635, 3183
MaeII ACGT 6 cut(s) 150, 181, 432, 1128, 2347, 2815
MfeI CAATTG 2 cut(s) 2652, 3375
MflI RGATCY 7 cut(s) 104, 574, 1292, 2116, 2554, 2698, 3523
MhlI GDGCHC 4 cut(s) 1336, 1722, 2172, 2987
MlsI TGGCCA 1 cut(s) 1365
MluNI TGGCCA 1 cut(s) 1365
MlyI GAGTC 4 cut(s) 237, 2539, 2683, 3467
MmeI TCCRAC 4 cut(s) 489, 922, 1825, 2417
Mox20I TGGCCA 1 cut(s) 1365
MroXI GAANNNNTTC 6 cut(s) 480, 691, 903, 981, 1611, 1710
MscI TGGCCA 1 cut(s) 1365
MslI CAYNNNNRTG 1 cut(s) 723
Msp20I TGGCCA 1 cut(s) 1365
MspCI CTTAAG 2 cut(s) 1883, 1979
MspI CCGG 4 cut(s) 195, 225, 680, 2934
MspR9I CCNGG 5 cut(s) 680, 1362, 1638, 2934, 3069
MunI CAATTG 2 cut(s) 2652, 3375
Mva1269I GAATGC 1 cut(s) 2865
MvaI CCWGG 3 cut(s) 1362, 1638, 3069
MvnI CGCG 1 cut(s) 209
MwoI GCNNNNNNNGC 8 cut(s) 168, 901, 1263, 1576, 1585, 1867, 1984, 2167
NciI CCSGG 2 cut(s) 680, 2934
NdeI CATATG 1 cut(s) 3097
NheI GCTAGC 2 cut(s) 2284, 3041
NlaIV GGNNCC 1 cut(s) 1149
NmuCI GTSAC 7 cut(s) 1058, 1090, 1631, 2176, 2755, 3149, 3273
NspI RCATGY 4 cut(s) 887, 1196, 1475, 1919
NspV TTCGAA 2 cut(s) 3194, 3390
PaeI GCATGC 1 cut(s) 1196
PaeR7I CTCGAG 1 cut(s) 2057
PciI ACATGT 2 cut(s) 1471, 1915
PcsI WCGNNNNNNNCGW 1 cut(s) 1404
PctI GAATGC 1 cut(s) 2865
PdmI GAANNNNTTC 6 cut(s) 480, 691, 903, 981, 1611, 1710
PflFI GACNNNGTC 1 cut(s) 2887
PflMI CCANNNNNTGG 2 cut(s) 2591, 3258
PkrI GCNGC 5 cut(s) 211, 541, 556, 1818, 2650
PleI GAGTC 4 cut(s) 236, 2538, 2682, 3466
PpsI GAGTC 4 cut(s) 236, 2538, 2682, 3466
Ppu21I YACGTR 1 cut(s) 182
PscI ACATGT 2 cut(s) 1471, 1915
PshAI GACNNNNGTC 1 cut(s) 3319
PshBI ATTAAT 1 cut(s) 8
PsiI TTATAA 1 cut(s) 3233
Psp124BI GAGCTC 1 cut(s) 2172
Psp1406I AACGTT 1 cut(s) 2347
Psp6I CCWGG 3 cut(s) 1360, 1636, 3067
PspFI CCCAGC 1 cut(s) 570
PspGI CCWGG 3 cut(s) 1360, 1636, 3067
PspN4I GGNNCC 1 cut(s) 1149
PspPI GGNCC 2 cut(s) 294, 3545
PsrI GAACNNNNNNTAC 4 cut(s) 137, 169, 641, 673
PstNI CAGNNNCTG 2 cut(s) 1062, 3074
PsuI RGATCY 7 cut(s) 104, 574, 1292, 2116, 2554, 2698, 3523
PsyI GACNNNGTC 1 cut(s) 2887
RsaI GTAC 5 cut(s) 146, 525, 999, 1953, 3586
RsaNI GTAC 5 cut(s) 145, 524, 998, 1952, 3585
RseI CAYNNNNRTG 1 cut(s) 723
SacI GAGCTC 1 cut(s) 2172
SatI GCNGC 5 cut(s) 210, 540, 555, 1817, 2649
Sau96I GGNCC 2 cut(s) 294, 3545
SchI GAGTC 4 cut(s) 237, 2539, 2683, 3467
ScrFI CCNGG 5 cut(s) 680, 1362, 1638, 2934, 3069
SduI GDGCHC 4 cut(s) 1336, 1722, 2172, 2987
SfaNI GCATC 6 cut(s) 1669, 1846, 1965, 2148, 2635, 3183
SfcI CTRYAG 2 cut(s) 1665, 3023
Sfr274I CTCGAG 1 cut(s) 2057
SfuI TTCGAA 2 cut(s) 3194, 3390
SinI GGWCC 1 cut(s) 3545
SlaI CTCGAG 1 cut(s) 2057
SmiMI CAYNNNNRTG 1 cut(s) 723
SmlI CTYRAG 8 cut(s) 99, 157, 1532, 1883, 1979, 2020, 2057, 2272
SmoI CTYRAG 8 cut(s) 99, 157, 1532, 1883, 1979, 2020, 2057, 2272
SpeI ACTAGT 1 cut(s) 1751
SphI GCATGC 1 cut(s) 1196
SsiI CCGC 7 cut(s) 209, 292, 344, 671, 2822, 3278, 3348
SspI AATATT 2 cut(s) 1485, 3217
SstI GAGCTC 1 cut(s) 2172
StyD4I CCNGG 5 cut(s) 678, 1360, 1636, 2932, 3067
StyI CCWWGG 2 cut(s) 301, 2517
TaaI ACNGT 8 cut(s) 1525, 1552, 2153, 2478, 3004, 3142, 3200, 3270
TaiI ACGT 6 cut(s) 153, 184, 435, 1131, 2350, 2818
TatI WGTACW 2 cut(s) 1951, 3584
TauI GCSGC 1 cut(s) 212
TseFI GTSAC 7 cut(s) 1058, 1090, 1631, 2176, 2755, 3149, 3273
TseI GCWGC 4 cut(s) 539, 554, 1816, 2648
Tsp45I GTSAC 7 cut(s) 1058, 1090, 1631, 2176, 2755, 3149, 3273
TspDTI ATGAA 9 cut(s) 229, 507, 615, 681, 1119, 1172, 1176, 1796, 2894
TspGWI ACGGA 3 cut(s) 644, 1413, 3211
Tth111I GACNNNGTC 1 cut(s) 2887
Van91I CCANNNNNTGG 2 cut(s) 2591, 3258
Vha464I CTTAAG 2 cut(s) 1883, 1979
VneI GTGCAC 2 cut(s) 1332, 2983
VpaK11BI GGWCC 1 cut(s) 3545
VspI ATTAAT 1 cut(s) 8
XapI RAATTY 8 cut(s) 559, 756, 812, 1368, 1808, 2231, 2435, 2967
XceI RCATGY 4 cut(s) 887, 1196, 1475, 1919
XcmI CCANNNNNNNNNTGG 1 cut(s) 2400
XhoI CTCGAG 1 cut(s) 2057
XmiI GTMKAC 1 cut(s) 675
XmnI GAANNNNTTC 6 cut(s) 480, 691, 903, 981, 1611, 1710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.