TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 261 - 365 | 1.9e-07 | Leucine-rich repeat region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 433 |
| AccBSI | CCGCTC | 1 cut(s) | 1025 |
| AccIII | TCCGGA | 1 cut(s) | 1687 |
| AciI | CCGC | 3 cut(s) | 1025, 1230, 1341 |
| AclWI | GGATC | 2 cut(s) | 588, 867 |
| AcsI | RAATTY | 4 cut(s) | 592, 994, 1158, 1628 |
| AcuI | CTGAAG | 3 cut(s) | 151, 1196, 1440 |
| AfaI | GTAC | 3 cut(s) | 1426, 1461, 1474 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 23, 433, 1687 |
| AhlI | ACTAGT | 1 cut(s) | 767 |
| AjnI | CCWGG | 1 cut(s) | 432 |
| AluBI | AGCT | 8 cut(s) | 165, 229, 348, 406, 678, 724, 946, 1706 |
| AluI | AGCT | 8 cut(s) | 165, 229, 348, 406, 678, 724, 946, 1706 |
| Alw21I | GWGCWC | 2 cut(s) | 1037, 1524 |
| Alw26I | GTCTC | 1 cut(s) | 196 |
| Alw44I | GTGCAC | 1 cut(s) | 1033 |
| AlwI | GGATC | 2 cut(s) | 588, 867 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 199 |
| Ama87I | CYCGRG | 2 cut(s) | 392, 470 |
| Aor13HI | TCCGGA | 1 cut(s) | 1687 |
| AoxI | GGCC | 1 cut(s) | 1678 |
| ApaLI | GTGCAC | 1 cut(s) | 1033 |
| ApeKI | GCWGC | 4 cut(s) | 101, 564, 828, 1356 |
| ApoI | RAATTY | 4 cut(s) | 592, 994, 1158, 1628 |
| AseI | ATTAAT | 1 cut(s) | 50 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 180, 621 |
| AspS9I | GGNCC | 1 cut(s) | 1388 |
| AsuC2I | CCSGG | 2 cut(s) | 1125, 1441 |
| AsuHPI | GGTGA | 3 cut(s) | 46, 750, 1304 |
| AsuII | TTCGAA | 2 cut(s) | 184, 898 |
| AvaI | CYCGRG | 2 cut(s) | 392, 470 |
| AvaII | GGWCC | 1 cut(s) | 1388 |
| BaeGI | GKGCMC | 1 cut(s) | 1037 |
| BanII | GRGCYC | 1 cut(s) | 1130 |
| BbsI | GAAGAC | 1 cut(s) | 123 |
| Bbv12I | GWGCWC | 2 cut(s) | 1037, 1524 |
| BbvCI | CCTCAGC | 1 cut(s) | 660 |
| BbvI | GCAGC | 4 cut(s) | 88, 551, 815, 1343 |
| BccI | CCATC | 5 cut(s) | 21, 689, 769, 1212, 1703 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1501, 1535 |
| BciT130I | CCWGG | 1 cut(s) | 434 |
| BclI | TGATCA | 1 cut(s) | 316 |
| BcnI | CCSGG | 2 cut(s) | 1125, 1441 |
| BcoDI | GTCTC | 1 cut(s) | 196 |
| BcuI | ACTAGT | 1 cut(s) | 767 |
| BfaI | CTAG | 4 cut(s) | 162, 329, 768, 1616 |
| BfmI | CTRYAG | 2 cut(s) | 349, 1575 |
| BglII | AGATCT | 2 cut(s) | 817, 892 |
| BisI | GCNGC | 4 cut(s) | 102, 565, 829, 1357 |
| BlsI | GCNGC | 4 cut(s) | 103, 566, 830, 1358 |
| Bme1390I | CCNGG | 3 cut(s) | 434, 1125, 1441 |
| Bme18I | GGWCC | 1 cut(s) | 1388 |
| BmeT110I | CYCGRG | 2 cut(s) | 392, 470 |
| BmgT120I | GGNCC | 1 cut(s) | 1388 |
| BmrFI | CCNGG | 3 cut(s) | 434, 1125, 1441 |
| BmsI | GCATC | 3 cut(s) | 815, 1185, 1570 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1662 |
| BpiI | GAAGAC | 1 cut(s) | 123 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 500, 532 |
| BpmI | CTGGAG | 1 cut(s) | 314 |
| Bpu10I | CCTNAGC | 2 cut(s) | 344, 660 |
| Bpu14I | TTCGAA | 2 cut(s) | 184, 898 |
| BpuEI | CTTGAG | 1 cut(s) | 560 |
| BpuMI | CCSGG | 2 cut(s) | 1125, 1441 |
| BsaBI | GATNNNNATC | 2 cut(s) | 315, 891 |
| BsaWI | WCCGGW | 1 cut(s) | 1687 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 23, 433, 1687 |
| Bse1I | ACTGG | 2 cut(s) | 238, 1277 |
| Bse3DI | GCAATG | 1 cut(s) | 790 |
| Bse8I | GATNNNNATC | 2 cut(s) | 315, 891 |
| BseAI | TCCGGA | 1 cut(s) | 1687 |
| BseBI | CCWGG | 1 cut(s) | 434 |
| BseGI | GGATG | 7 cut(s) | 9, 13, 518, 830, 1206, 1223, 1684 |
| BseJI | GATNNNNATC | 2 cut(s) | 315, 891 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 23, 433, 1687 |
| BseMI | GCAATG | 1 cut(s) | 790 |
| BseMII | CTCAG | 8 cut(s) | 105, 191, 335, 430, 498, 651, 716, 1537 |
| BseNI | ACTGG | 2 cut(s) | 238, 1277 |
| BseSI | GKGCMC | 1 cut(s) | 1037 |
| BseXI | GCAGC | 4 cut(s) | 88, 551, 815, 1343 |
| BsgI | GTGCAG | 2 cut(s) | 192, 814 |
| BshFI | GGCC | 1 cut(s) | 1680 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1037, 1524 |
| BsiHKCI | CYCGRG | 2 cut(s) | 392, 470 |
| BsiSI | CCGG | 3 cut(s) | 1124, 1441, 1688 |
| BslFI | GGGAC | 4 cut(s) | 684, 1515, 1553, 1637 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 23, 433, 1687 |
| BsmAI | GTCTC | 1 cut(s) | 196 |
| BsmFI | GGGAC | 4 cut(s) | 684, 1515, 1553, 1637 |
| BsnI | GGCC | 1 cut(s) | 1680 |
| BsoBI | CYCGRG | 2 cut(s) | 392, 470 |
| Bsp119I | TTCGAA | 2 cut(s) | 184, 898 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1037, 1130, 1524 |
| Bsp13I | TCCGGA | 1 cut(s) | 1687 |
| Bsp1407I | TGTACA | 1 cut(s) | 1472 |
| Bsp143I | GATC | 6 cut(s) | 316, 580, 817, 859, 892, 1294 |
| BspACI | CCGC | 3 cut(s) | 1025, 1230, 1341 |
| BspANI | GGCC | 1 cut(s) | 1680 |
| BspCNI | CTCAG | 8 cut(s) | 104, 192, 336, 429, 499, 652, 717, 1536 |
| BspEI | TCCGGA | 1 cut(s) | 1687 |
| BspMAI | CTGCAG | 1 cut(s) | 1579 |
| BspPI | GGATC | 2 cut(s) | 588, 867 |
| BspT104I | TTCGAA | 2 cut(s) | 184, 898 |
| BsrBI | CCGCTC | 1 cut(s) | 1025 |
| BsrDI | GCAATG | 1 cut(s) | 790 |
| BsrGI | TGTACA | 1 cut(s) | 1472 |
| BsrI | ACTGG | 2 cut(s) | 238, 1277 |
| BssMI | GATC | 6 cut(s) | 316, 580, 817, 859, 892, 1294 |
| Bst2UI | CCWGG | 1 cut(s) | 434 |
| Bst6I | CTCTTC | 2 cut(s) | 627, 1372 |
| BstAUI | TGTACA | 1 cut(s) | 1472 |
| BstBI | TTCGAA | 2 cut(s) | 184, 898 |
| BstC8I | GCNNGC | 3 cut(s) | 158, 1023, 1437 |
| BstF5I | GGATG | 7 cut(s) | 9, 13, 518, 830, 1206, 1223, 1684 |
| BstKTI | GATC | 6 cut(s) | 319, 583, 820, 862, 895, 1297 |
| BstMAI | GTCTC | 1 cut(s) | 196 |
| BstMBI | GATC | 6 cut(s) | 316, 580, 817, 859, 892, 1294 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 162, 924, 1436, 1528 |
| BstNI | CCWGG | 1 cut(s) | 434 |
| BstNSI | RCATGY | 2 cut(s) | 193, 986 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1662 |
| BstSCI | CCNGG | 3 cut(s) | 432, 1123, 1439 |
| BstSFI | CTRYAG | 2 cut(s) | 349, 1575 |
| BstSLI | GKGCMC | 1 cut(s) | 1037 |
| BstV1I | GCAGC | 4 cut(s) | 88, 551, 815, 1343 |
| BstV2I | GAAGAC | 1 cut(s) | 123 |
| BstX2I | RGATCY | 4 cut(s) | 580, 817, 859, 892 |
| BstYI | RGATCY | 4 cut(s) | 580, 817, 859, 892 |
| BsuRI | GGCC | 1 cut(s) | 1680 |
| BtsCI | GGATG | 7 cut(s) | 9, 13, 518, 830, 1206, 1223, 1684 |
| BtsI | GCAGTG | 1 cut(s) | 1185 |
| BtsIMutI | CAGTG | 4 cut(s) | 175, 231, 587, 1185 |
| Cac8I | GCNNGC | 3 cut(s) | 158, 1023, 1437 |
| CaiI | CAGNNNCTG | 1 cut(s) | 199 |
| Cfr13I | GGNCC | 1 cut(s) | 1388 |
| Csp6I | GTAC | 3 cut(s) | 1425, 1460, 1473 |
| CviAII | CATG | 6 cut(s) | 190, 267, 281, 983, 1104, 1517 |
| CviQI | GTAC | 3 cut(s) | 1425, 1460, 1473 |
| DpnI | GATC | 6 cut(s) | 318, 582, 819, 861, 894, 1296 |
| DpnII | GATC | 6 cut(s) | 316, 580, 817, 859, 892, 1294 |
| Eam1104I | CTCTTC | 2 cut(s) | 627, 1372 |
| EarI | CTCTTC | 2 cut(s) | 627, 1372 |
| Eco24I | GRGCYC | 1 cut(s) | 1130 |
| Eco32I | GATATC | 1 cut(s) | 1509 |
| Eco47I | GGWCC | 1 cut(s) | 1388 |
| Eco57I | CTGAAG | 3 cut(s) | 151, 1196, 1440 |
| Eco88I | CYCGRG | 2 cut(s) | 392, 470 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1388 |
| EcoRI | GAATTC | 1 cut(s) | 1158 |
| EcoRII | CCWGG | 1 cut(s) | 432 |
| EcoRV | GATATC | 1 cut(s) | 1509 |
| EcoT22I | ATGCAT | 1 cut(s) | 1650 |
| EcoT38I | GRGCYC | 1 cut(s) | 1130 |
| FaeI | CATG | 6 cut(s) | 193, 270, 284, 986, 1107, 1520 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 529, 561 |
| FaqI | GGGAC | 4 cut(s) | 684, 1515, 1553, 1637 |
| FatI | CATG | 6 cut(s) | 189, 266, 280, 982, 1103, 1516 |
| FauI | CCCGC | 2 cut(s) | 1018, 1334 |
| FauNDI | CATATG | 1 cut(s) | 1450 |
| FbaI | TGATCA | 1 cut(s) | 316 |
| Fnu4HI | GCNGC | 4 cut(s) | 102, 565, 829, 1357 |
| FokI | GGATG | 5 cut(s) | 505, 837, 1193, 1230, 1671 |
| FriOI | GRGCYC | 1 cut(s) | 1130 |
| Fsp4HI | GCNGC | 4 cut(s) | 102, 565, 829, 1357 |
| FspBI | CTAG | 4 cut(s) | 162, 329, 768, 1616 |
| GluI | GCNGC | 4 cut(s) | 102, 565, 829, 1357 |
| GsuI | CTGGAG | 1 cut(s) | 314 |
| HaeIII | GGCC | 1 cut(s) | 1680 |
| HapII | CCGG | 3 cut(s) | 1124, 1441, 1688 |
| Hin1II | CATG | 6 cut(s) | 193, 270, 284, 986, 1107, 1520 |
| HincII | GTYRAC | 2 cut(s) | 264, 1347 |
| HindII | GTYRAC | 2 cut(s) | 264, 1347 |
| HindIII | AAGCTT | 2 cut(s) | 404, 944 |
| HpaI | GTTAAC | 1 cut(s) | 264 |
| HpaII | CCGG | 3 cut(s) | 1124, 1441, 1688 |
| HphI | GGTGA | 3 cut(s) | 46, 750, 1304 |
| Hpy166II | GTNNAC | 5 cut(s) | 264, 514, 1035, 1347, 1475 |
| Hpy188I | TCNGA | 7 cut(s) | 39, 201, 382, 508, 1066, 1132, 1657 |
| Hpy188III | TCNNGA | 9 cut(s) | 293, 394, 470, 533, 557, 642, 853, 1268, 1688 |
| Hpy8I | GTNNAC | 5 cut(s) | 264, 514, 1035, 1347, 1475 |
| HpyAV | CCTTC | 8 cut(s) | 119, 554, 792, 850, 1163, 1220, 1379, 1630 |
| HpyCH4IV | ACGT | 2 cut(s) | 120, 1381 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 162, 924, 1436, 1528 |
| HpySE526I | ACGT | 2 cut(s) | 120, 1381 |
| Hsp92II | CATG | 6 cut(s) | 193, 270, 284, 986, 1107, 1520 |
| Kpn2I | TCCGGA | 1 cut(s) | 1687 |
| Ksp22I | TGATCA | 1 cut(s) | 316 |
| KspAI | GTTAAC | 1 cut(s) | 264 |
| Kzo9I | GATC | 6 cut(s) | 316, 580, 817, 859, 892, 1294 |
| LmnI | GCTCC | 1 cut(s) | 1703 |
| Lsp1109I | GCAGC | 4 cut(s) | 88, 551, 815, 1343 |
| LweI | GCATC | 3 cut(s) | 815, 1185, 1570 |
| MaeI | CTAG | 4 cut(s) | 162, 329, 768, 1616 |
| MaeII | ACGT | 2 cut(s) | 120, 1381 |
| MaeIII | GTNAC | 4 cut(s) | 239, 756, 804, 1328 |
| MalI | GATC | 6 cut(s) | 318, 582, 819, 861, 894, 1296 |
| MbiI | CCGCTC | 1 cut(s) | 1025 |
| MboI | GATC | 6 cut(s) | 316, 580, 817, 859, 892, 1294 |
| MboII | GAAGA | 8 cut(s) | 128, 614, 617, 887, 896, 1213, 1359, 1609 |
| MflI | RGATCY | 4 cut(s) | 580, 817, 859, 892 |
| MhlI | GDGCHC | 3 cut(s) | 1037, 1130, 1524 |
| MlyI | GAGTC | 6 cut(s) | 123, 158, 205, 764, 877, 1342 |
| MmeI | TCCRAC | 1 cut(s) | 88 |
| Mph1103I | ATGCAT | 1 cut(s) | 1650 |
| MroI | TCCGGA | 1 cut(s) | 1687 |
| MroXI | GAANNNNTTC | 2 cut(s) | 180, 621 |
| MseI | TTAA | 9 cut(s) | 50, 263, 411, 600, 630, 797, 836, 1142, 1611 |
| MslI | CAYNNNNRTG | 1 cut(s) | 271 |
| MspI | CCGG | 3 cut(s) | 1124, 1441, 1688 |
| MspR9I | CCNGG | 3 cut(s) | 434, 1125, 1441 |
| MvaI | CCWGG | 1 cut(s) | 434 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 162, 924, 1436, 1528 |
| NciI | CCSGG | 2 cut(s) | 1125, 1441 |
| NdeI | CATATG | 1 cut(s) | 1450 |
| NdeII | GATC | 6 cut(s) | 316, 580, 817, 859, 892, 1294 |
| NlaIII | CATG | 6 cut(s) | 193, 270, 284, 986, 1107, 1520 |
| NmeAIII | GCCGAG | 1 cut(s) | 1374 |
| NmuCI | GTSAC | 2 cut(s) | 756, 1328 |
| NsiI | ATGCAT | 1 cut(s) | 1650 |
| NspI | RCATGY | 2 cut(s) | 193, 986 |
| NspV | TTCGAA | 2 cut(s) | 184, 898 |
| PaeR7I | CTCGAG | 2 cut(s) | 392, 470 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1401 |
| PdmI | GAANNNNTTC | 2 cut(s) | 180, 621 |
| PfeI | GAWTC | 4 cut(s) | 176, 377, 529, 1120 |
| PflFI | GACNNNGTC | 1 cut(s) | 1544 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 433 |
| PkrI | GCNGC | 4 cut(s) | 103, 566, 830, 1358 |
| PleI | GAGTC | 6 cut(s) | 123, 157, 204, 763, 876, 1342 |
| PpsI | GAGTC | 6 cut(s) | 123, 157, 204, 763, 876, 1342 |
| PpuMI | RGGWCCY | 1 cut(s) | 1388 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1662 |
| PshBI | ATTAAT | 1 cut(s) | 50 |
| Psp5II | RGGWCCY | 1 cut(s) | 1388 |
| Psp6I | CCWGG | 1 cut(s) | 432 |
| PspGI | CCWGG | 1 cut(s) | 432 |
| PspPI | GGNCC | 1 cut(s) | 1388 |
| PspPPI | RGGWCCY | 1 cut(s) | 1388 |
| PstI | CTGCAG | 1 cut(s) | 1579 |
| PstNI | CAGNNNCTG | 1 cut(s) | 199 |
| PsuI | RGATCY | 4 cut(s) | 580, 817, 859, 892 |
| PsyI | GACNNNGTC | 1 cut(s) | 1544 |
| RsaI | GTAC | 3 cut(s) | 1426, 1461, 1474 |
| RsaNI | GTAC | 3 cut(s) | 1425, 1460, 1473 |
| RseI | CAYNNNNRTG | 1 cut(s) | 271 |
| SaqAI | TTAA | 9 cut(s) | 50, 263, 411, 600, 630, 797, 836, 1142, 1611 |
| SatI | GCNGC | 4 cut(s) | 102, 565, 829, 1357 |
| Sau3AI | GATC | 6 cut(s) | 316, 580, 817, 859, 892, 1294 |
| Sau96I | GGNCC | 1 cut(s) | 1388 |
| SchI | GAGTC | 6 cut(s) | 123, 158, 205, 764, 877, 1342 |
| ScrFI | CCNGG | 3 cut(s) | 434, 1125, 1441 |
| SduI | GDGCHC | 3 cut(s) | 1037, 1130, 1524 |
| SfaNI | GCATC | 3 cut(s) | 815, 1185, 1570 |
| SfcI | CTRYAG | 2 cut(s) | 349, 1575 |
| Sfr274I | CTCGAG | 2 cut(s) | 392, 470 |
| SfuI | TTCGAA | 2 cut(s) | 184, 898 |
| SinI | GGWCC | 1 cut(s) | 1388 |
| SlaI | CTCGAG | 2 cut(s) | 392, 470 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 271 |
| SmlI | CTYRAG | 3 cut(s) | 392, 470, 575 |
| SmoI | CTYRAG | 3 cut(s) | 392, 470, 575 |
| SpeI | ACTAGT | 1 cut(s) | 767 |
| SsiI | CCGC | 3 cut(s) | 1025, 1230, 1341 |
| SspMI | CTAG | 4 cut(s) | 162, 329, 768, 1616 |
| StyD4I | CCNGG | 3 cut(s) | 432, 1123, 1439 |
| TaiI | ACGT | 2 cut(s) | 123, 1384 |
| TaqI | TCGA | 7 cut(s) | 184, 393, 471, 898, 1148, 1511, 1548 |
| TatI | WGTACW | 1 cut(s) | 1472 |
| TfiI | GAWTC | 4 cut(s) | 176, 377, 529, 1120 |
| Tru1I | TTAA | 9 cut(s) | 50, 263, 411, 600, 630, 797, 836, 1142, 1611 |
| Tru9I | TTAA | 9 cut(s) | 50, 263, 411, 600, 630, 797, 836, 1142, 1611 |
| TscAI | CASTG | 4 cut(s) | 175, 238, 594, 1192 |
| TseFI | GTSAC | 2 cut(s) | 756, 1328 |
| TseI | GCWGC | 4 cut(s) | 101, 564, 828, 1356 |
| Tsp45I | GTSAC | 2 cut(s) | 756, 1328 |
| TspDTI | ATGAA | 6 cut(s) | 60, 723, 1029, 1092, 1151, 1649 |
| TspGWI | ACGGA | 1 cut(s) | 823 |
| TspRI | CASTG | 4 cut(s) | 175, 238, 594, 1192 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1544 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 433 |
| VneI | GTGCAC | 1 cut(s) | 1033 |
| VpaK11BI | GGWCC | 1 cut(s) | 1388 |
| VspI | ATTAAT | 1 cut(s) | 50 |
| XapI | RAATTY | 4 cut(s) | 592, 994, 1158, 1628 |
| XceI | RCATGY | 2 cut(s) | 193, 986 |
| XhoI | CTCGAG | 2 cut(s) | 392, 470 |
| XmnI | GAANNNNTTC | 2 cut(s) | 180, 621 |
| XspI | CTAG | 4 cut(s) | 162, 329, 768, 1616 |
| Zsp2I | ATGCAT | 1 cut(s) | 1650 |