Rmu_sc0006724.1_g000003

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006724.1
Physical Location & Seq
Reverse (-)
18777 .. 22150
3374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006724.1_g000003.1.cds

Sequence Viewer

Length: 2658 bp
atgcaggcatcgtcatcatcctcatcgccgccggtgccatcgccatcggggccaccatccccttggaaacccataaaataccggacgtcctacgacgtgttcttgagcttcaaaggtgaagacacacgaaggaccttcacagaccacctctacgcagcactagatcgtgccggagtcgtgacgtttagggatgccgagggactaagatggggagaaaacatagcggagaaattaatgcagataatcgaagggtgtaggatctctctcatagtcttctcagaaaagtacgcggattcgagatggtgtctggaggagctggtgcaggtcatggagtgtagaagaatacgaaggcaactggttttccccatattctatcatgttgatccttcacatgtcagaaaccagaccggtagctttgctcatgcgtttcagaaatatgaagaaaacatgctctcagaaaaacaaaaagaaggtacagataagatagccaggtggaaagctgctctcagaggagcggcgaatttggttggcttcgatattgctgatagacatgaagcagagtttatcaatagcattgttgacgagatatgcaaacagctgaccaacacatacttgaatttagctgtctacccagttgcaatacattctcgtgttgatgatatttgcaagtgtttaggtgttggattagatgatgatgttcgcatggttggaatttggggtatgggtggaatcggcaaaacaacagttgccaaagccatctataacaaattttatcttgactttgacagtagatgtttcctagcagatgttagggagactgcaaaggactcaaatggtaagattgttctgcaagaaagacttctttctgatgtcttaaaaccaatcaagatagtggtaggtgatgtttccagaggggtcaatgtaataaaagaacgacttggaagcaaaaaggtacttgtcatttttgatgatgtagatcatgaggaccaattgcatgcattggcaataaggcgtgattcctttggtccaggaagtagaataattataacaacaagagatcgacatttgctagagctactgaaagtggatacaatacatctagctcaagaaatgaatgaagaagaagctctggagctcttcagttggcatgcctttcaaaatatttctcctaatgaagagtatgtcgaactctcaagaagagtggttgcttactgtggaggtttaccactggctcttgaagttttagggtctttcctctttggaaggagcataggagattggaatagcacactgaagaaattggaaaaaattcctgatggcagaattcagtcaaggctcagaataagctttgatgcaattgatgagagccagaggaacatattcctccatatatgttgtttcttcatcggaatggacaagaactacgtcatacaaatcctcaacagctatggttttccagcagaaatagaaatcagtgtcctgctccaacgttgtcttgtaactgtcagtgaaaaaaacaagctcatgatgcatgatttgcttcgagacatgggcagagaagttgttcgtgaagaatccccaaagtgccctgaaagacgtagcagattgtggcatcgggaagacgtaacagatgtattgacagatgaatctggaactgaagagactgaaggactcactctaaatttgcaaagatcggacagcatgagtttcagtacagaagcatttagaaacatgaagagactgaaattgctccaactcaaccatgtaaaactcactggagactgcgacaagtttcccaaaaagctaagctggctctgcttgcgaggattctccgcacaggtcatacgaaatgagtttcttaatgaaccatacctggtttctctcgacctgcggtacagcaatctcgtacgagtttgggagtattcccggtatttgatccttaaagactgtgtgagtttgccaaagattgacaagtccattggacttctttctcaacttgccttgctaaatcttaagggctgcacaatgctcaaggaccttccggaggacttctataagttgcgttgttttaggactcttgttctttctggctgttcgagatttgagaatttgagcaaggatatagaaaatatgatttctttgaaaactcttgttataagtggcacaggcatcagtgaagtaccagcctctgtagataatgtgaggaacttggacttttcatctcgacaaggcctgagtggactaaaacgatgtgaccagacatcaaggcctaggctgagtttgtggtggtttttatacgaatttcgtttttggtttttatttgctattttggttgtttggtatctttgggagacacaaagggtggaggtgaggggggcgtcttcggtggggtcagtgaccccaccaaagagtgaggatgaggggggcgtctgcggtagggccagtgaagataatttggagacctcaaagaccccaccgaagaatgaggataatttagagactcccgctgaagagtggccgagtctcctagaaaaattacgccgtgaggataatttggagaccccaccgaagagtgaagataatttagagactagcctcagtctcctagaaaaattacgccgtggatatatacgccgactcatctcaaacggtgactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

885

Amino Acids

101.26

Weight (kDa)

6.29

Isoelectric Point (pI)

50.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1046, 2156
AatII GACGTC 1 cut(s) 89
Acc36I ACCTGC 2 cut(s) 313, 1896
AccB1I GGYRCC 1 cut(s) 34
AccBSI CCGCTC 1 cut(s) 515
AccI GTMKAC 1 cut(s) 627
AccII CGCG 1 cut(s) 290
AccIII TCCGGA 1 cut(s) 2041
AciI CCGC 8 cut(s) 29, 224, 290, 515, 1833, 1891, 2433, 2505
AclI AACGTT 1 cut(s) 1489
AclWI GGATC 3 cut(s) 266, 377, 1930
AcoI YGGCCR 1 cut(s) 2516
AcsI RAATTY 9 cut(s) 520, 616, 711, 767, 1308, 1323, 1681, 2107, 2300
AcuI CTGAAG 5 cut(s) 1123, 1313, 1677, 1686, 2529
AcyI GRCGYC 3 cut(s) 86, 2378, 2427
AfaI GTAC 7 cut(s) 287, 475, 954, 1714, 1895, 1908, 2181
AfiI CCNNNNNNNGG 1 cut(s) 2044
AflII CTTAAG 1 cut(s) 2012
AflIII ACRYGT 2 cut(s) 96, 391
AgeI ACCGGT 1 cut(s) 407
AgsI TTSAA 5 cut(s) 112, 616, 1157, 1238, 2143
AjiI CACGTC 1 cut(s) 97
AjnI CCWGG 3 cut(s) 488, 1027, 1872
Alw21I GWGCWC 1 cut(s) 1137
AlwI GGATC 3 cut(s) 266, 377, 1930
AlwNI CAGNNNCTG 1 cut(s) 2189
Aor13HI TCCGGA 1 cut(s) 2041
AoxI GGCC 5 cut(s) 50, 2230, 2267, 2439, 2516
ApeKI GCWGC 3 cut(s) 155, 500, 2019
ApoI RAATTY 9 cut(s) 520, 616, 711, 767, 1308, 1323, 1681, 2107, 2300
AseI ATTAAT 1 cut(s) 233
AsiGI ACCGGT 1 cut(s) 407
Asp700I GAANNNNTTC 4 cut(s) 858, 1308, 1379, 1563
AspA2I CCTAGG 1 cut(s) 2270
AspS9I GGNCC 6 cut(s) 50, 132, 985, 1025, 2035, 2439
AsuC2I CCSGG 1 cut(s) 1927
AsuHPI GGTGA 3 cut(s) 128, 911, 2380
AvaII GGWCC 4 cut(s) 132, 985, 1025, 2035
AvrII CCTAGG 1 cut(s) 2270
BaeGI GKGCMC 1 cut(s) 1589
BanI GGYRCC 1 cut(s) 34
BanII GRGCYC 1 cut(s) 1137
BauI CACGAG 1 cut(s) 648
BbsI GAAGAC 4 cut(s) 126, 265, 1626, 2373
Bbv12I GWGCWC 1 cut(s) 1137
BbvI GCAGC 3 cut(s) 167, 487, 2006
BccI CCATC 7 cut(s) 46, 52, 64, 201, 294, 764, 1310
BceAI ACGGC 2 cut(s) 2526, 2604
BciT130I CCWGG 3 cut(s) 490, 1029, 1874
BciVI GTATCC 1 cut(s) 1081
BcnI CCSGG 1 cut(s) 1927
BfaI CTAG 8 cut(s) 161, 800, 1070, 1100, 2271, 2528, 2592, 2606
BfmI CTRYAG 1 cut(s) 2190
BfrI CTTAAG 1 cut(s) 2012
BfuAI ACCTGC 2 cut(s) 313, 1896
BfuI GTATCC 1 cut(s) 1081
BglI GCCNNNNNGGC 1 cut(s) 49
BisI GCNGC 5 cut(s) 29, 156, 501, 516, 2020
BlnI CCTAGG 1 cut(s) 2270
BlpI GCTNAGC 1 cut(s) 1805
BlsI GCNGC 5 cut(s) 30, 157, 502, 517, 2021
Bme1390I CCNGG 4 cut(s) 490, 1029, 1874, 1927
Bme18I GGWCC 4 cut(s) 132, 985, 1025, 2035
BmgBI CACGTC 1 cut(s) 97
BmgT120I GGNCC 6 cut(s) 50, 132, 985, 1025, 2035, 2439
BmiI GGNNCC 2 cut(s) 36, 51
BmrFI CCNGG 4 cut(s) 490, 1029, 1874, 1927
BmrI ACTGGG 1 cut(s) 626
BmsI GCATC 6 cut(s) 17, 181, 1342, 1518, 1621, 2178
BmuI ACTGGG 1 cut(s) 626
BpiI GAAGAC 4 cut(s) 126, 265, 1626, 2373
BpmI CTGGAG 3 cut(s) 329, 1151, 1797
Bpu1102I GCTNAGC 1 cut(s) 1805
BpuEI CTTGAG 4 cut(s) 124, 1089, 1177, 2015
BpuMI CCSGG 1 cut(s) 1927
BsaBI GATNNNNATC 1 cut(s) 975
BsaHI GRCGYC 3 cut(s) 86, 2378, 2427
BsaI GGTCTC 2 cut(s) 2453, 2552
BsaJI CCNNGG 4 cut(s) 62, 195, 2270, 2620
BsaWI WCCGGW 3 cut(s) 81, 407, 2041
Bsc4I CCNNNNNNNGG 1 cut(s) 2044
Bse118I RCCGGY 2 cut(s) 31, 407
Bse1I ACTGG 5 cut(s) 360, 632, 1233, 1780, 2442
Bse8I GATNNNNATC 1 cut(s) 975
BseAI TCCGGA 1 cut(s) 2041
BseBI CCWGG 3 cut(s) 490, 1029, 1874
BseDI CCNNGG 4 cut(s) 62, 195, 2270, 2620
BseGI GGATG 4 cut(s) 17, 56, 196, 2422
BseJI GATNNNNATC 1 cut(s) 975
BseLI CCNNNNNNNGG 1 cut(s) 2044
BseMII CTCAG 7 cut(s) 291, 468, 520, 1351, 2225, 2267, 2611
BseNI ACTGG 5 cut(s) 360, 632, 1233, 1780, 2442
BseRI GAGGAG 2 cut(s) 326, 525
BseSI GKGCMC 1 cut(s) 1589
BseXI GCAGC 3 cut(s) 167, 487, 2006
BsgI GTGCAG 2 cut(s) 341, 2005
Bsh1236I CGCG 1 cut(s) 290
BshFI GGCC 5 cut(s) 52, 2232, 2269, 2441, 2518
BshNI GGYRCC 1 cut(s) 34
BshTI ACCGGT 1 cut(s) 407
BsiHKAI GWGCWC 1 cut(s) 1137
BsiSI CCGG 6 cut(s) 32, 82, 171, 408, 1927, 2042
BsiWI CGTACG 1 cut(s) 1906
BslFI GGGAC 1 cut(s) 213
BslI CCNNNNNNNGG 1 cut(s) 2044
BsmFI GGGAC 1 cut(s) 213
BsnI GGCC 5 cut(s) 52, 2232, 2269, 2441, 2518
Bso31I GGTCTC 2 cut(s) 2453, 2552
Bsp1286I GDGCHC 2 cut(s) 1137, 1589
Bsp13I TCCGGA 1 cut(s) 2041
Bsp143I GATC 7 cut(s) 163, 258, 382, 976, 1057, 1691, 1935
Bsp1720I GCTNAGC 1 cut(s) 1805
BspACI CCGC 8 cut(s) 29, 224, 290, 515, 1833, 1891, 2433, 2505
BspANI GGCC 5 cut(s) 52, 2232, 2269, 2441, 2518
BspCNI CTCAG 7 cut(s) 290, 467, 519, 1350, 2226, 2268, 2610
BspEI TCCGGA 1 cut(s) 2041
BspFNI CGCG 1 cut(s) 290
BspHI TCATGA 2 cut(s) 979, 1524
BspLI GGNNCC 2 cut(s) 36, 51
BspMI ACCTGC 2 cut(s) 313, 1896
BspPI GGATC 3 cut(s) 266, 377, 1930
BspQI GCTCTTC 1 cut(s) 1142
BspT107I GGYRCC 1 cut(s) 34
BspTI CTTAAG 1 cut(s) 2012
BspTNI GGTCTC 2 cut(s) 2453, 2552
BsrBI CCGCTC 1 cut(s) 515
BsrFI RCCGGY 2 cut(s) 31, 407
BsrI ACTGG 5 cut(s) 360, 632, 1233, 1780, 2442
BssAI RCCGGY 2 cut(s) 31, 407
BssECI CCNNGG 4 cut(s) 62, 195, 2270, 2620
BssMI GATC 7 cut(s) 163, 258, 382, 976, 1057, 1691, 1935
BssNI GRCGYC 3 cut(s) 86, 2378, 2427
BssSI CACGAG 1 cut(s) 648
BssT1I CCWWGG 2 cut(s) 62, 2270
Bst2BI CACGAG 1 cut(s) 648
Bst2UI CCWGG 3 cut(s) 490, 1029, 1874
Bst4CI ACNGT 6 cut(s) 745, 788, 1214, 1504, 1949, 2651
Bst6I CTCTTC 7 cut(s) 1142, 1170, 1192, 1653, 1730, 2505, 2564
BstACI GRCGYC 3 cut(s) 86, 2378, 2427
BstAFI CTTAAG 1 cut(s) 2012
BstAPI GCANNNNNTGC 1 cut(s) 1537
BstC8I GCNNGC 5 cut(s) 6, 996, 1149, 1811, 1820
BstDEI CTNAG 9 cut(s) 203, 277, 454, 506, 1337, 1805, 2234, 2276, 2597
BstDSI CCRYGG 1 cut(s) 2620
BstENI CCTNNNNNAGG 1 cut(s) 2042
BstF5I GGATG 4 cut(s) 17, 56, 196, 2422
BstFNI CGCG 1 cut(s) 290
BstKTI GATC 7 cut(s) 166, 261, 385, 979, 1060, 1694, 1938
BstMBI GATC 7 cut(s) 163, 258, 382, 976, 1057, 1691, 1935
BstMWI GCNNNNNNNGC 7 cut(s) 34, 49, 1528, 1537, 1810, 1815, 1819
BstNI CCWGG 3 cut(s) 490, 1029, 1874
BstNSI RCATGY 4 cut(s) 395, 451, 998, 1151
BstSCI CCNGG 4 cut(s) 488, 1027, 1872, 1925
BstSFI CTRYAG 1 cut(s) 2190
BstSLI GKGCMC 1 cut(s) 1589
BstUI CGCG 1 cut(s) 290
BstV1I GCAGC 3 cut(s) 167, 487, 2006
BstV2I GAAGAC 4 cut(s) 126, 265, 1626, 2373
BstX2I RGATCY 1 cut(s) 258
BstXI CCANNNNNNTGG 1 cut(s) 63
BstYI RGATCY 1 cut(s) 258
BsuI GTATCC 1 cut(s) 1081
BsuRI GGCC 5 cut(s) 52, 2232, 2269, 2441, 2518
BtgI CCRYGG 1 cut(s) 2620
BtgZI GCGATG 2 cut(s) 9, 24
BtrI CACGTC 1 cut(s) 97
BtsCI GGATG 4 cut(s) 17, 56, 196, 2422
BtsIMutI CAGTG 8 cut(s) 1226, 1289, 1480, 1513, 1773, 2179, 2400, 2449
BveI ACCTGC 2 cut(s) 313, 1896
Cac8I GCNNGC 5 cut(s) 6, 996, 1149, 1811, 1820
CaiI CAGNNNCTG 1 cut(s) 2189
CciI TCATGA 2 cut(s) 979, 1524
Cfr10I RCCGGY 2 cut(s) 31, 407
Cfr13I GGNCC 6 cut(s) 50, 132, 985, 1025, 2035, 2439
CseI GACGC 2 cut(s) 2367, 2416
CsiI ACCWGGT 1 cut(s) 1872
Csp6I GTAC 7 cut(s) 286, 474, 953, 1713, 1894, 1907, 2180
CspAI ACCGGT 1 cut(s) 407
CspCI CAANNNNNGTGG 2 cut(s) 1182, 1217
CviQI GTAC 7 cut(s) 286, 474, 953, 1713, 1894, 1907, 2180
DdeI CTNAG 9 cut(s) 203, 277, 454, 506, 1337, 1805, 2234, 2276, 2597
DpnI GATC 7 cut(s) 165, 260, 384, 978, 1059, 1693, 1937
DpnII GATC 7 cut(s) 163, 258, 382, 976, 1057, 1691, 1935
EaeI YGGCCR 1 cut(s) 2516
Eam1104I CTCTTC 7 cut(s) 1142, 1170, 1192, 1653, 1730, 2505, 2564
EarI CTCTTC 7 cut(s) 1142, 1170, 1192, 1653, 1730, 2505, 2564
Ecl136II GAGCTC 1 cut(s) 1135
Eco130I CCWWGG 2 cut(s) 62, 2270
Eco147I AGGCCT 2 cut(s) 2232, 2269
Eco24I GRGCYC 1 cut(s) 1137
Eco31I GGTCTC 2 cut(s) 2453, 2552
Eco47I GGWCC 4 cut(s) 132, 985, 1025, 2035
Eco53kI GAGCTC 1 cut(s) 1135
Eco57I CTGAAG 5 cut(s) 1123, 1313, 1677, 1686, 2529
EcoICRI GAGCTC 1 cut(s) 1135
EcoNI CCTNNNNNAGG 1 cut(s) 2042
EcoO109I RGGNCCY 2 cut(s) 132, 2035
EcoRI GAATTC 1 cut(s) 1323
EcoRII CCWGG 3 cut(s) 488, 1027, 1872
EcoT14I CCWWGG 2 cut(s) 62, 2270
EcoT22I ATGCAT 2 cut(s) 1000, 1533
EcoT38I GRGCYC 1 cut(s) 1137
ErhI CCWWGG 2 cut(s) 62, 2270
FalI AAGNNNNNCTT 4 cut(s) 843, 875, 921, 953
FaqI GGGAC 1 cut(s) 213
FauI CCCGC 1 cut(s) 2512
FblI GTMKAC 1 cut(s) 627
Fnu4HI GCNGC 5 cut(s) 29, 156, 501, 516, 2020
FokI GGATG 4 cut(s) 4, 43, 203, 2429
FriOI GRGCYC 1 cut(s) 1137
Fsp4HI GCNGC 5 cut(s) 29, 156, 501, 516, 2020
FspBI CTAG 8 cut(s) 161, 800, 1070, 1100, 2271, 2528, 2592, 2606
GluI GCNGC 5 cut(s) 29, 156, 501, 516, 2020
GsuI CTGGAG 3 cut(s) 329, 1151, 1797
HaeIII GGCC 5 cut(s) 52, 2232, 2269, 2441, 2518
HapII CCGG 6 cut(s) 32, 82, 171, 408, 1927, 2042
HgaI GACGC 2 cut(s) 2367, 2416
Hin1I GRCGYC 3 cut(s) 86, 2378, 2427
HincII GTYRAC 1 cut(s) 580
HindII GTYRAC 1 cut(s) 580
HindIII AAGCTT 1 cut(s) 1345
HpaII CCGG 6 cut(s) 32, 82, 171, 408, 1927, 2042
HphI GGTGA 3 cut(s) 128, 911, 2380
Hpy166II GTNNAC 4 cut(s) 580, 628, 1223, 2240
Hpy188I TCNGA 9 cut(s) 280, 398, 432, 457, 509, 868, 1340, 1409, 1696
Hpy8I GTNNAC 4 cut(s) 580, 628, 1223, 2240
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 9 cut(s) 123, 145, 242, 342, 396, 464, 1257, 1661, 2048
HpyCH4III ACNGT 6 cut(s) 745, 788, 1214, 1504, 1949, 2651
HpyCH4IV ACGT 7 cut(s) 86, 96, 182, 1425, 1489, 1597, 1623
HpyF10VI GCNNNNNNNGC 7 cut(s) 34, 49, 1528, 1537, 1810, 1815, 1819
HpyF3I CTNAG 9 cut(s) 203, 277, 454, 506, 1337, 1805, 2234, 2276, 2597
HpySE526I ACGT 7 cut(s) 86, 96, 182, 1425, 1489, 1597, 1623
Hsp92I GRCGYC 3 cut(s) 86, 2378, 2427
Kpn2I TCCGGA 1 cut(s) 2041
Kzo9I GATC 7 cut(s) 163, 258, 382, 976, 1057, 1691, 1935
LguI GCTCTTC 1 cut(s) 1142
LmnI GCTCC 6 cut(s) 313, 512, 1132, 1266, 1488, 1755
Lsp1109I GCAGC 3 cut(s) 167, 487, 2006
LweI GCATC 6 cut(s) 17, 181, 1342, 1518, 1621, 2178
MabI ACCWGGT 1 cut(s) 1872
MaeI CTAG 8 cut(s) 161, 800, 1070, 1100, 2271, 2528, 2592, 2606
MaeII ACGT 7 cut(s) 86, 96, 182, 1425, 1489, 1597, 1623
MaeIII GTNAC 6 cut(s) 178, 1498, 1624, 2252, 2395, 2651
MalI GATC 7 cut(s) 165, 260, 384, 978, 1059, 1693, 1937
MbiI CCGCTC 1 cut(s) 515
MboI GATC 7 cut(s) 163, 258, 382, 976, 1057, 1691, 1935
MfeI CAATTG 2 cut(s) 989, 1356
MflI RGATCY 1 cut(s) 258
MhlI GDGCHC 2 cut(s) 1137, 1589
MlyI GAGTC 7 cut(s) 183, 821, 1665, 2068, 2494, 2530, 2631
MmeI TCCRAC 4 cut(s) 661, 688, 1510, 1777
Mph1103I ATGCAT 2 cut(s) 1000, 1533
MroI TCCGGA 1 cut(s) 2041
MroXI GAANNNNTTC 4 cut(s) 858, 1308, 1379, 1563
MseI TTAA 5 cut(s) 233, 875, 1860, 1941, 2013
MslI CAYNNNNRTG 2 cut(s) 648, 1409
MspA1I CMGCKG 2 cut(s) 598, 2507
MspCI CTTAAG 1 cut(s) 2012
MspI CCGG 6 cut(s) 32, 82, 171, 408, 1927, 2042
MspR9I CCNGG 4 cut(s) 490, 1029, 1874, 1927
MunI CAATTG 2 cut(s) 989, 1356
MvaI CCWGG 3 cut(s) 490, 1029, 1874
MvnI CGCG 1 cut(s) 290
MwoI GCNNNNNNNGC 7 cut(s) 34, 49, 1528, 1537, 1810, 1815, 1819
NciI CCSGG 1 cut(s) 1927
NdeII GATC 7 cut(s) 163, 258, 382, 976, 1057, 1691, 1935
NlaIV GGNNCC 2 cut(s) 36, 51
NmeAIII GCCGAG 2 cut(s) 220, 2544
NmuCI GTSAC 4 cut(s) 178, 2252, 2395, 2651
NsiI ATGCAT 2 cut(s) 1000, 1533
NspI RCATGY 4 cut(s) 395, 451, 998, 1151
PaeI GCATGC 2 cut(s) 998, 1151
PagI TCATGA 2 cut(s) 979, 1524
PceI AGGCCT 2 cut(s) 2232, 2269
PciI ACATGT 1 cut(s) 391
PciSI GCTCTTC 1 cut(s) 1142
PdmI GAANNNNTTC 4 cut(s) 858, 1308, 1379, 1563
PfeI GAWTC 6 cut(s) 293, 729, 1016, 1574, 1646, 1827
Pfl23II CGTACG 1 cut(s) 1906
PfoI TCCNGGA 1 cut(s) 1027
PinAI ACCGGT 1 cut(s) 407
PkrI GCNGC 5 cut(s) 30, 157, 502, 517, 2021
PleI GAGTC 7 cut(s) 182, 821, 1665, 2068, 2494, 2529, 2631
PpsI GAGTC 7 cut(s) 182, 821, 1665, 2068, 2494, 2529, 2631
PpuMI RGGWCCY 2 cut(s) 132, 2035
PscI ACATGT 1 cut(s) 391
PshBI ATTAAT 1 cut(s) 233
PsiI TTATAA 2 cut(s) 1046, 2156
Psp124BI GAGCTC 1 cut(s) 1137
Psp1406I AACGTT 1 cut(s) 1489
Psp5II RGGWCCY 2 cut(s) 132, 2035
Psp6I CCWGG 3 cut(s) 488, 1027, 1872
PspGI CCWGG 3 cut(s) 488, 1027, 1872
PspLI CGTACG 1 cut(s) 1906
PspN4I GGNNCC 2 cut(s) 36, 51
PspPI GGNCC 6 cut(s) 50, 132, 985, 1025, 2035, 2439
PspPPI RGGWCCY 2 cut(s) 132, 2035
PstNI CAGNNNCTG 1 cut(s) 2189
PsuI RGATCY 1 cut(s) 258
PvuII CAGCTG 1 cut(s) 598
RsaI GTAC 7 cut(s) 287, 475, 954, 1714, 1895, 1908, 2181
RsaNI GTAC 7 cut(s) 286, 474, 953, 1713, 1894, 1907, 2180
RseI CAYNNNNRTG 2 cut(s) 648, 1409
SacI GAGCTC 1 cut(s) 1137
SapI GCTCTTC 1 cut(s) 1142
SaqAI TTAA 5 cut(s) 233, 875, 1860, 1941, 2013
SatI GCNGC 5 cut(s) 29, 156, 501, 516, 2020
Sau3AI GATC 7 cut(s) 163, 258, 382, 976, 1057, 1691, 1935
Sau96I GGNCC 6 cut(s) 50, 132, 985, 1025, 2035, 2439
SchI GAGTC 7 cut(s) 183, 821, 1665, 2068, 2494, 2530, 2631
ScrFI CCNGG 4 cut(s) 490, 1029, 1874, 1927
SduI GDGCHC 2 cut(s) 1137, 1589
SexAI ACCWGGT 1 cut(s) 1872
SfaNI GCATC 6 cut(s) 17, 181, 1342, 1518, 1621, 2178
SfcI CTRYAG 1 cut(s) 2190
SgrAI CRCCGGYG 1 cut(s) 31
SinI GGWCC 4 cut(s) 132, 985, 1025, 2035
SmiMI CAYNNNNRTG 2 cut(s) 648, 1409
SmlI CTYRAG 5 cut(s) 103, 1104, 1192, 2012, 2030
SmoI CTYRAG 5 cut(s) 103, 1104, 1192, 2012, 2030
SphI GCATGC 2 cut(s) 998, 1151
SseBI AGGCCT 2 cut(s) 2232, 2269
SsiI CCGC 8 cut(s) 29, 224, 290, 515, 1833, 1891, 2433, 2505
SspI AATATT 1 cut(s) 1162
SspMI CTAG 8 cut(s) 161, 800, 1070, 1100, 2271, 2528, 2592, 2606
SstI GAGCTC 1 cut(s) 1137
StuI AGGCCT 2 cut(s) 2232, 2269
StyD4I CCNGG 4 cut(s) 488, 1027, 1872, 1925
StyI CCWWGG 2 cut(s) 62, 2270
TaaI ACNGT 6 cut(s) 745, 788, 1214, 1504, 1949, 2651
TaiI ACGT 7 cut(s) 89, 99, 185, 1428, 1492, 1600, 1626
TaqI TCGA 9 cut(s) 246, 296, 534, 1060, 1185, 1543, 1884, 2096, 2224
TatI WGTACW 1 cut(s) 1712
TauI GCSGC 2 cut(s) 31, 518
TfiI GAWTC 6 cut(s) 293, 729, 1016, 1574, 1646, 1827
Tru1I TTAA 5 cut(s) 233, 875, 1860, 1941, 2013
Tru9I TTAA 5 cut(s) 233, 875, 1860, 1941, 2013
TscAI CASTG 8 cut(s) 1233, 1296, 1480, 1513, 1780, 2179, 2400, 2449
TseFI GTSAC 4 cut(s) 178, 2252, 2395, 2651
TseI GCWGC 3 cut(s) 155, 500, 2019
Tsp45I GTSAC 4 cut(s) 178, 2252, 2395, 2651
TspRI CASTG 8 cut(s) 1233, 1296, 1480, 1513, 1780, 2179, 2400, 2449
Vha464I CTTAAG 1 cut(s) 2012
VpaK11BI GGWCC 4 cut(s) 132, 985, 1025, 2035
VspI ATTAAT 1 cut(s) 233
XagI CCTNNNNNAGG 1 cut(s) 2042
XapI RAATTY 9 cut(s) 520, 616, 711, 767, 1308, 1323, 1681, 2107, 2300
XceI RCATGY 4 cut(s) 395, 451, 998, 1151
XcmI CCANNNNNNNNNTGG 1 cut(s) 60
XmaJI CCTAGG 1 cut(s) 2270
XmiI GTMKAC 1 cut(s) 627
XmnI GAANNNNTTC 4 cut(s) 858, 1308, 1379, 1563
XspI CTAG 8 cut(s) 161, 800, 1070, 1100, 2271, 2528, 2592, 2606
ZraI GACGTC 1 cut(s) 87
Zsp2I ATGCAT 2 cut(s) 1000, 1533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.