TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_C48 | PF02902 | 84 - 225 | 1.1e-10 | Ulp1 protease family, C-terminal catalytic domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 274, 498 |
| AcsI | RAATTY | 1 cut(s) | 470 |
| AcuI | CTGAAG | 1 cut(s) | 238 |
| AdeI | CACNNNGTG | 1 cut(s) | 634 |
| AfaI | GTAC | 1 cut(s) | 125 |
| AgsI | TTSAA | 9 cut(s) | 116, 137, 163, 187, 199, 215, 236, 557, 719 |
| AjnI | CCWGG | 1 cut(s) | 486 |
| AluBI | AGCT | 3 cut(s) | 258, 737, 765 |
| AluI | AGCT | 3 cut(s) | 258, 737, 765 |
| Alw21I | GWGCWC | 1 cut(s) | 273 |
| AlwI | GGATC | 2 cut(s) | 274, 498 |
| AoxI | GGCC | 2 cut(s) | 202, 593 |
| ApeKI | GCWGC | 3 cut(s) | 119, 361, 737 |
| ApoI | RAATTY | 1 cut(s) | 470 |
| AspS9I | GGNCC | 1 cut(s) | 593 |
| AsuHPI | GGTGA | 2 cut(s) | 386, 533 |
| BbsI | GAAGAC | 1 cut(s) | 95 |
| Bbv12I | GWGCWC | 1 cut(s) | 273 |
| BbvI | GCAGC | 3 cut(s) | 131, 348, 724 |
| BccI | CCATC | 1 cut(s) | 735 |
| BciT130I | CCWGG | 1 cut(s) | 488 |
| BclI | TGATCA | 1 cut(s) | 42 |
| BfaI | CTAG | 1 cut(s) | 766 |
| BfmI | CTRYAG | 2 cut(s) | 292, 747 |
| BisI | GCNGC | 3 cut(s) | 120, 362, 738 |
| BlsI | GCNGC | 3 cut(s) | 121, 363, 739 |
| Bme1390I | CCNGG | 1 cut(s) | 488 |
| BmgT120I | GGNCC | 1 cut(s) | 593 |
| BmrFI | CCNGG | 1 cut(s) | 488 |
| BmrI | ACTGGG | 1 cut(s) | 424 |
| BmuI | ACTGGG | 1 cut(s) | 424 |
| BpiI | GAAGAC | 1 cut(s) | 95 |
| BpuEI | CTTGAG | 2 cut(s) | 516, 701 |
| BsaBI | GATNNNNATC | 1 cut(s) | 11 |
| BsaJI | CCNNGG | 1 cut(s) | 264 |
| Bse1I | ACTGG | 2 cut(s) | 156, 419 |
| Bse3DI | GCAATG | 2 cut(s) | 286, 699 |
| Bse8I | GATNNNNATC | 1 cut(s) | 11 |
| BseBI | CCWGG | 1 cut(s) | 488 |
| BseDI | CCNNGG | 1 cut(s) | 264 |
| BseGI | GGATG | 3 cut(s) | 12, 273, 441 |
| BseJI | GATNNNNATC | 1 cut(s) | 11 |
| BseMI | GCAATG | 2 cut(s) | 286, 699 |
| BseMII | CTCAG | 1 cut(s) | 540 |
| BseNI | ACTGG | 2 cut(s) | 156, 419 |
| BseXI | GCAGC | 3 cut(s) | 131, 348, 724 |
| BsgI | GTGCAG | 1 cut(s) | 723 |
| BshFI | GGCC | 2 cut(s) | 204, 595 |
| BsiHKAI | GWGCWC | 1 cut(s) | 273 |
| BslFI | GGGAC | 1 cut(s) | 599 |
| BsmFI | GGGAC | 1 cut(s) | 599 |
| BsnI | GGCC | 2 cut(s) | 204, 595 |
| Bsp1286I | GDGCHC | 1 cut(s) | 273 |
| Bsp143I | GATC | 3 cut(s) | 42, 279, 490 |
| BspANI | GGCC | 2 cut(s) | 204, 595 |
| BspCNI | CTCAG | 1 cut(s) | 541 |
| BspPI | GGATC | 2 cut(s) | 274, 498 |
| BsrDI | GCAATG | 2 cut(s) | 286, 699 |
| BsrI | ACTGG | 2 cut(s) | 156, 419 |
| BssECI | CCNNGG | 1 cut(s) | 264 |
| BssMI | GATC | 3 cut(s) | 42, 279, 490 |
| BssT1I | CCWWGG | 1 cut(s) | 264 |
| Bst2UI | CCWGG | 1 cut(s) | 488 |
| Bst4CI | ACNGT | 3 cut(s) | 243, 590, 748 |
| BstC8I | GCNNGC | 1 cut(s) | 299 |
| BstDEI | CTNAG | 1 cut(s) | 549 |
| BstF5I | GGATG | 3 cut(s) | 12, 273, 441 |
| BstKTI | GATC | 3 cut(s) | 45, 282, 493 |
| BstMBI | GATC | 3 cut(s) | 42, 279, 490 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 128, 601 |
| BstNI | CCWGG | 1 cut(s) | 488 |
| BstSCI | CCNGG | 1 cut(s) | 486 |
| BstSFI | CTRYAG | 2 cut(s) | 292, 747 |
| BstV1I | GCAGC | 3 cut(s) | 131, 348, 724 |
| BstV2I | GAAGAC | 1 cut(s) | 95 |
| BsuRI | GGCC | 2 cut(s) | 204, 595 |
| BtsCI | GGATG | 3 cut(s) | 12, 273, 441 |
| BtsI | GCAGTG | 1 cut(s) | 308 |
| BtsIMutI | CAGTG | 3 cut(s) | 54, 308, 546 |
| Cac8I | GCNNGC | 1 cut(s) | 299 |
| Cfr13I | GGNCC | 1 cut(s) | 593 |
| CseI | GACGC | 1 cut(s) | 536 |
| Csp6I | GTAC | 1 cut(s) | 124 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 399, 434 |
| CviAII | CATG | 6 cut(s) | 140, 206, 349, 457, 613, 664 |
| CviQI | GTAC | 1 cut(s) | 124 |
| DdeI | CTNAG | 1 cut(s) | 549 |
| DpnI | GATC | 3 cut(s) | 44, 281, 492 |
| DpnII | GATC | 3 cut(s) | 42, 279, 490 |
| DraIII | CACNNNGTG | 1 cut(s) | 634 |
| Eco130I | CCWWGG | 1 cut(s) | 264 |
| Eco57I | CTGAAG | 1 cut(s) | 238 |
| EcoRII | CCWGG | 1 cut(s) | 486 |
| EcoT14I | CCWWGG | 1 cut(s) | 264 |
| ErhI | CCWWGG | 1 cut(s) | 264 |
| FaeI | CATG | 6 cut(s) | 143, 209, 352, 460, 616, 667 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 525, 557, 726, 758 |
| FaqI | GGGAC | 1 cut(s) | 599 |
| FatI | CATG | 6 cut(s) | 139, 205, 348, 456, 612, 663 |
| FbaI | TGATCA | 1 cut(s) | 42 |
| Fnu4HI | GCNGC | 3 cut(s) | 120, 362, 738 |
| FokI | GGATG | 2 cut(s) | 260, 428 |
| Fsp4HI | GCNGC | 3 cut(s) | 120, 362, 738 |
| FspBI | CTAG | 1 cut(s) | 766 |
| GluI | GCNGC | 3 cut(s) | 120, 362, 738 |
| HaeIII | GGCC | 2 cut(s) | 204, 595 |
| HgaI | GACGC | 1 cut(s) | 536 |
| Hin1II | CATG | 6 cut(s) | 143, 209, 352, 460, 616, 667 |
| HinfI | GANTC | 1 cut(s) | 91 |
| HphI | GGTGA | 2 cut(s) | 386, 533 |
| Hpy166II | GTNNAC | 3 cut(s) | 346, 454, 628 |
| Hpy188III | TCNNGA | 5 cut(s) | 163, 277, 494, 680, 731 |
| Hpy8I | GTNNAC | 3 cut(s) | 346, 454, 628 |
| HpyAV | CCTTC | 2 cut(s) | 164, 367 |
| HpyCH4III | ACNGT | 3 cut(s) | 243, 590, 748 |
| HpyCH4V | TGCA | 2 cut(s) | 692, 740 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 128, 601 |
| HpyF3I | CTNAG | 1 cut(s) | 549 |
| Hsp92II | CATG | 6 cut(s) | 143, 209, 352, 460, 616, 667 |
| Ksp22I | TGATCA | 1 cut(s) | 42 |
| Kzo9I | GATC | 3 cut(s) | 42, 279, 490 |
| LpnPI | CCDG | 7 cut(s) | 92, 137, 311, 400, 473, 478, 500 |
| Lsp1109I | GCAGC | 3 cut(s) | 131, 348, 724 |
| MaeI | CTAG | 1 cut(s) | 766 |
| MaeIII | GTNAC | 1 cut(s) | 248 |
| MalI | GATC | 3 cut(s) | 44, 281, 492 |
| MboI | GATC | 3 cut(s) | 42, 279, 490 |
| MboII | GAAGA | 5 cut(s) | 16, 35, 100, 569, 661 |
| MhlI | GDGCHC | 1 cut(s) | 273 |
| MluCI | AATT | 4 cut(s) | 96, 231, 470, 675 |
| MlyI | GAGTC | 1 cut(s) | 85 |
| MmeI | TCCRAC | 1 cut(s) | 689 |
| MnlI | CCTC | 9 cut(s) | 13, 375, 429, 517, 544, 574, 660, 678, 691 |
| MspR9I | CCNGG | 1 cut(s) | 488 |
| MvaI | CCWGG | 1 cut(s) | 488 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 128, 601 |
| NdeII | GATC | 3 cut(s) | 42, 279, 490 |
| NlaIII | CATG | 6 cut(s) | 143, 209, 352, 460, 616, 667 |
| PkrI | GCNGC | 3 cut(s) | 121, 363, 739 |
| PleI | GAGTC | 1 cut(s) | 85 |
| PpsI | GAGTC | 1 cut(s) | 85 |
| Psp6I | CCWGG | 1 cut(s) | 486 |
| PspGI | CCWGG | 1 cut(s) | 486 |
| PspPI | GGNCC | 1 cut(s) | 593 |
| RsaI | GTAC | 1 cut(s) | 125 |
| RsaNI | GTAC | 1 cut(s) | 124 |
| SatI | GCNGC | 3 cut(s) | 120, 362, 738 |
| Sau3AI | GATC | 3 cut(s) | 42, 279, 490 |
| Sau96I | GGNCC | 1 cut(s) | 593 |
| SchI | GAGTC | 1 cut(s) | 85 |
| ScrFI | CCNGG | 1 cut(s) | 488 |
| SduI | GDGCHC | 1 cut(s) | 273 |
| SetI | ASST | 8 cut(s) | 260, 270, 440, 523, 555, 689, 739, 767 |
| SfcI | CTRYAG | 2 cut(s) | 292, 747 |
| SmlI | CTYRAG | 2 cut(s) | 531, 680 |
| SmoI | CTYRAG | 2 cut(s) | 531, 680 |
| Sse9I | AATT | 4 cut(s) | 96, 231, 470, 675 |
| SspI | AATATT | 1 cut(s) | 63 |
| SspMI | CTAG | 1 cut(s) | 766 |
| StyD4I | CCNGG | 1 cut(s) | 486 |
| StyI | CCWWGG | 1 cut(s) | 264 |
| TaaI | ACNGT | 3 cut(s) | 243, 590, 748 |
| TaqI | TCGA | 1 cut(s) | 321 |
| TaqII | GACCGA | 1 cut(s) | 581 |
| TasI | AATT | 4 cut(s) | 96, 231, 470, 675 |
| TscAI | CASTG | 3 cut(s) | 61, 315, 553 |
| TseI | GCWGC | 3 cut(s) | 119, 361, 737 |
| TspDTI | ATGAA | 6 cut(s) | 17, 87, 156, 365, 430, 601 |
| TspGWI | ACGGA | 2 cut(s) | 434, 645 |
| TspRI | CASTG | 3 cut(s) | 61, 315, 553 |
| XapI | RAATTY | 1 cut(s) | 470 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 375 |
| XspI | CTAG | 1 cut(s) | 766 |