resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 14 - 177 | 9.9e-52 | TIR domain |
| TIR_2 | PF13676 | 16 - 113 | 3e-15 | TIR domain |
| ATPase_2 | PF01637 | 196 - 307 | 3e-06 | ATPase domain predominantly from Archaea |
| NB-ARC | PF00931 | 201 - 360 | 7.3e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 429 - 498 | 4e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 774 - 877 | 1.5e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1527 |
| Acc36I | ACCTGC | 1 cut(s) | 552 |
| Acc65I | GGTACC | 1 cut(s) | 3369 |
| AccB1I | GGYRCC | 1 cut(s) | 3369 |
| AccBSI | CCGCTC | 1 cut(s) | 1004 |
| AccI | GTMKAC | 3 cut(s) | 1893, 3396, 3501 |
| AciI | CCGC | 4 cut(s) | 76, 842, 1004, 1791 |
| AclWI | GGATC | 7 cut(s) | 665, 724, 2383, 2433, 2656, 2665, 2678 |
| AcoI | YGGCCR | 1 cut(s) | 943 |
| AcsI | RAATTY | 8 cut(s) | 21, 207, 695, 733, 2349, 3013, 3021, 3453 |
| AcuI | CTGAAG | 3 cut(s) | 1088, 1241, 2234 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 2489, 2898, 3317 |
| AflII | CTTAAG | 3 cut(s) | 1771, 2765, 3008 |
| AflIII | ACRYGT | 1 cut(s) | 868 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1478 |
| AjiI | CACGTC | 1 cut(s) | 3400 |
| AjnI | CCWGG | 2 cut(s) | 2665, 3365 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3198, 3230 |
| Alw21I | GWGCWC | 1 cut(s) | 3521 |
| Alw26I | GTCTC | 6 cut(s) | 1418, 1455, 1898, 2113, 2326, 3153 |
| AlwI | GGATC | 7 cut(s) | 665, 724, 2383, 2433, 2656, 2665, 2678 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 544, 1657, 2870 |
| Ama87I | CYCGRG | 2 cut(s) | 2955, 3355 |
| AoxI | GGCC | 2 cut(s) | 829, 943 |
| ApeKI | GCWGC | 4 cut(s) | 355, 778, 920, 2244 |
| ApoI | RAATTY | 8 cut(s) | 21, 207, 695, 733, 2349, 3013, 3021, 3453 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 267, 855, 1015, 1758 |
| Asp718I | GGTACC | 1 cut(s) | 3369 |
| AspLEI | GCGC | 1 cut(s) | 1276 |
| AspS9I | GGNCC | 2 cut(s) | 36, 334 |
| AsuC2I | CCSGG | 8 cut(s) | 176, 629, 2393, 2423, 2956, 2957, 3356, 3357 |
| AsuHPI | GGTGA | 8 cut(s) | 392, 1011, 1049, 1876, 2504, 2896, 3089, 3194 |
| AsuII | TTCGAA | 1 cut(s) | 3017 |
| AvaI | CYCGRG | 2 cut(s) | 2955, 3355 |
| AvaII | GGWCC | 2 cut(s) | 36, 334 |
| AxyI | CCTNAGG | 1 cut(s) | 2055 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2880, 2913 |
| BalI | TGGCCA | 1 cut(s) | 945 |
| BamHI | GGATCC | 1 cut(s) | 2670 |
| BanI | GGYRCC | 1 cut(s) | 3369 |
| BanII | GRGCYC | 1 cut(s) | 3521 |
| BbsI | GAAGAC | 1 cut(s) | 1477 |
| Bbv12I | GWGCWC | 1 cut(s) | 3521 |
| BbvI | GCAGC | 4 cut(s) | 367, 790, 932, 2231 |
| BceAI | ACGGC | 1 cut(s) | 2257 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2017, 2051 |
| BciT130I | CCWGG | 2 cut(s) | 2667, 3367 |
| BciVI | GTATCC | 2 cut(s) | 2930, 2991 |
| BclI | TGATCA | 2 cut(s) | 835, 1950 |
| BcnI | CCSGG | 8 cut(s) | 176, 629, 2393, 2423, 2956, 2957, 3356, 3357 |
| BcoDI | GTCTC | 6 cut(s) | 1418, 1455, 1898, 2113, 2326, 3153 |
| BfaI | CTAG | 6 cut(s) | 510, 728, 2360, 2544, 3125, 3225 |
| BfmI | CTRYAG | 3 cut(s) | 564, 776, 924 |
| BfrI | CTTAAG | 3 cut(s) | 1771, 2765, 3008 |
| BfuAI | ACCTGC | 1 cut(s) | 552 |
| BfuI | GTATCC | 2 cut(s) | 2930, 2991 |
| BglII | AGATCT | 2 cut(s) | 1684, 1717 |
| BisI | GCNGC | 5 cut(s) | 356, 779, 921, 1791, 2245 |
| BlsI | GCNGC | 5 cut(s) | 357, 780, 922, 1792, 2246 |
| BmcAI | AGTACT | 2 cut(s) | 1389, 1622 |
| Bme18I | GGWCC | 2 cut(s) | 36, 334 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1478 |
| BmeT110I | CYCGRG | 2 cut(s) | 2955, 3355 |
| BmgBI | CACGTC | 1 cut(s) | 3400 |
| BmgT120I | GGNCC | 2 cut(s) | 36, 334 |
| BmiI | GGNNCC | 4 cut(s) | 336, 2672, 2774, 3371 |
| BmrI | ACTGGG | 2 cut(s) | 2789, 2833 |
| BmuI | ACTGGG | 2 cut(s) | 2789, 2833 |
| BpiI | GAAGAC | 1 cut(s) | 1477 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 504, 536 |
| BpmI | CTGGAG | 3 cut(s) | 1893, 2580, 3349 |
| Bpu10I | CCTNAGC | 1 cut(s) | 27 |
| Bpu14I | TTCGAA | 1 cut(s) | 3017 |
| BpuEI | CTTGAG | 3 cut(s) | 2135, 2774, 3535 |
| BpuMI | CCSGG | 8 cut(s) | 176, 629, 2393, 2423, 2956, 2957, 3356, 3357 |
| Bsa29I | ATCGAT | 1 cut(s) | 3253 |
| BsaAI | YACGTR | 1 cut(s) | 331 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3249 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 57, 87, 615, 645 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 2489, 2898, 3317 |
| Bse1I | ACTGG | 7 cut(s) | 538, 1618, 2127, 2318, 2795, 2828, 3389 |
| Bse21I | CCTNAGG | 1 cut(s) | 2055 |
| Bse3DI | GCAATG | 1 cut(s) | 1308 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3249 |
| BseBI | CCWGG | 2 cut(s) | 2667, 3367 |
| BseCI | ATCGAT | 1 cut(s) | 3253 |
| BseGI | GGATG | 8 cut(s) | 145, 625, 1370, 2131, 2529, 2713, 2919, 3322 |
| BseJI | GATNNNNATC | 1 cut(s) | 3249 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 2489, 2898, 3317 |
| BseMI | GCAATG | 1 cut(s) | 1308 |
| BseNI | ACTGG | 7 cut(s) | 538, 1618, 2127, 2318, 2795, 2828, 3389 |
| BseRI | GAGGAG | 5 cut(s) | 174, 1836, 2852, 2855, 3154 |
| BseXI | GCAGC | 4 cut(s) | 367, 790, 932, 2231 |
| BsgI | GTGCAG | 1 cut(s) | 1155 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2803 |
| BshFI | GGCC | 2 cut(s) | 831, 945 |
| BshNI | GGYRCC | 1 cut(s) | 3369 |
| BshVI | ATCGAT | 1 cut(s) | 3253 |
| BsiEI | CGRYCG | 1 cut(s) | 2803 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3521 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2955, 3355 |
| BsiSI | CCGG | 6 cut(s) | 176, 628, 2393, 2422, 2956, 3356 |
| BslFI | GGGAC | 1 cut(s) | 479 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 2489, 2898, 3317 |
| BsmAI | GTCTC | 6 cut(s) | 1418, 1455, 1898, 2113, 2326, 3153 |
| BsmFI | GGGAC | 1 cut(s) | 479 |
| BsmI | GAATGC | 4 cut(s) | 193, 1188, 2786, 3043 |
| BsnI | GGCC | 2 cut(s) | 831, 945 |
| BsoBI | CYCGRG | 2 cut(s) | 2955, 3355 |
| Bsp119I | TTCGAA | 1 cut(s) | 3017 |
| Bsp1286I | GDGCHC | 1 cut(s) | 3521 |
| Bsp1407I | TGTACA | 1 cut(s) | 3289 |
| Bsp19I | CCATGG | 1 cut(s) | 946 |
| BspACI | CCGC | 4 cut(s) | 76, 842, 1004, 1791 |
| BspANI | GGCC | 2 cut(s) | 831, 945 |
| BspDI | ATCGAT | 1 cut(s) | 3253 |
| BspHI | TCATGA | 1 cut(s) | 2680 |
| BspLI | GGNNCC | 4 cut(s) | 336, 2672, 2774, 3371 |
| BspMAI | CTGCAG | 1 cut(s) | 780 |
| BspMI | ACCTGC | 1 cut(s) | 552 |
| BspPI | GGATC | 7 cut(s) | 665, 724, 2383, 2433, 2656, 2665, 2678 |
| BspT104I | TTCGAA | 1 cut(s) | 3017 |
| BspT107I | GGYRCC | 1 cut(s) | 3369 |
| BspTI | CTTAAG | 3 cut(s) | 1771, 2765, 3008 |
| BsrBI | CCGCTC | 1 cut(s) | 1004 |
| BsrDI | GCAATG | 1 cut(s) | 1308 |
| BsrGI | TGTACA | 1 cut(s) | 3289 |
| BsrI | ACTGG | 7 cut(s) | 538, 1618, 2127, 2318, 2795, 2828, 3389 |
| BssNAI | GTATAC | 1 cut(s) | 3502 |
| BssT1I | CCWWGG | 2 cut(s) | 946, 1146 |
| Bst1107I | GTATAC | 1 cut(s) | 3502 |
| Bst2UI | CCWGG | 2 cut(s) | 2667, 3367 |
| Bst4CI | ACNGT | 7 cut(s) | 398, 555, 1133, 1524, 2447, 2866, 2893 |
| Bst6I | CTCTTC | 1 cut(s) | 2166 |
| BstAFI | CTTAAG | 3 cut(s) | 1771, 2765, 3008 |
| BstAUI | TGTACA | 1 cut(s) | 3289 |
| BstBAI | YACGTR | 1 cut(s) | 331 |
| BstBI | TTCGAA | 1 cut(s) | 3017 |
| BstC8I | GCNNGC | 3 cut(s) | 353, 1068, 1351 |
| BstDSI | CCRYGG | 3 cut(s) | 61, 946, 2892 |
| BstF5I | GGATG | 8 cut(s) | 145, 625, 1370, 2131, 2529, 2713, 2919, 3322 |
| BstHHI | GCGC | 1 cut(s) | 1276 |
| BstMAI | GTCTC | 6 cut(s) | 1418, 1455, 1898, 2113, 2326, 3153 |
| BstMCI | CGRYCG | 1 cut(s) | 2803 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 245, 683 |
| BstNI | CCWGG | 2 cut(s) | 2667, 3367 |
| BstNSI | RCATGY | 2 cut(s) | 551, 1070 |
| BstSFI | CTRYAG | 3 cut(s) | 564, 776, 924 |
| BstV1I | GCAGC | 4 cut(s) | 367, 790, 932, 2231 |
| BstV2I | GAAGAC | 1 cut(s) | 1477 |
| BstX2I | RGATCY | 5 cut(s) | 1684, 1717, 2425, 2661, 2670 |
| BstYI | RGATCY | 5 cut(s) | 1684, 1717, 2425, 2661, 2670 |
| BstZ17I | GTATAC | 1 cut(s) | 3502 |
| Bsu15I | ATCGAT | 1 cut(s) | 3253 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2055 |
| BsuI | GTATCC | 2 cut(s) | 2930, 2991 |
| BsuRI | GGCC | 2 cut(s) | 831, 945 |
| BsuTUI | ATCGAT | 1 cut(s) | 3253 |
| BtgI | CCRYGG | 3 cut(s) | 61, 946, 2892 |
| BtgZI | GCGATG | 2 cut(s) | 46, 3120 |
| BtrI | CACGTC | 1 cut(s) | 3400 |
| BtsCI | GGATG | 8 cut(s) | 145, 625, 1370, 2131, 2529, 2713, 2919, 3322 |
| BtsI | GCAGTG | 1 cut(s) | 2995 |
| BtsIMutI | CAGTG | 1 cut(s) | 2995 |
| BveI | ACCTGC | 1 cut(s) | 552 |
| Cac8I | GCNNGC | 3 cut(s) | 353, 1068, 1351 |
| CaiI | CAGNNNCTG | 3 cut(s) | 544, 1657, 2870 |
| CciI | TCATGA | 1 cut(s) | 2680 |
| CfoI | GCGC | 1 cut(s) | 1276 |
| Cfr13I | GGNCC | 2 cut(s) | 36, 334 |
| Cfr9I | CCCGGG | 2 cut(s) | 2955, 3355 |
| ClaI | ATCGAT | 1 cut(s) | 3253 |
| CseI | GACGC | 1 cut(s) | 2303 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1486, 1521 |
| DraI | TTTAAA | 1 cut(s) | 2626 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1527 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1478 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1527 |
| EaeI | YGGCCR | 1 cut(s) | 943 |
| Eam1104I | CTCTTC | 1 cut(s) | 2166 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1478 |
| EarI | CTCTTC | 1 cut(s) | 2166 |
| Ecl136II | GAGCTC | 1 cut(s) | 3519 |
| Eco130I | CCWWGG | 2 cut(s) | 946, 1146 |
| Eco147I | AGGCCT | 1 cut(s) | 831 |
| Eco24I | GRGCYC | 1 cut(s) | 3521 |
| Eco32I | GATATC | 2 cut(s) | 505, 2269 |
| Eco47I | GGWCC | 2 cut(s) | 36, 334 |
| Eco53kI | GAGCTC | 1 cut(s) | 3519 |
| Eco57I | CTGAAG | 3 cut(s) | 1088, 1241, 2234 |
| Eco81I | CCTNAGG | 1 cut(s) | 2055 |
| Eco88I | CYCGRG | 2 cut(s) | 2955, 3355 |
| EcoICRI | GAGCTC | 1 cut(s) | 3519 |
| EcoRI | GAATTC | 3 cut(s) | 21, 695, 3013 |
| EcoRII | CCWGG | 2 cut(s) | 2665, 3365 |
| EcoRV | GATATC | 2 cut(s) | 505, 2269 |
| EcoT14I | CCWWGG | 2 cut(s) | 946, 1146 |
| EcoT22I | ATGCAT | 5 cut(s) | 984, 1072, 1449, 2579, 2786 |
| EcoT38I | GRGCYC | 1 cut(s) | 3521 |
| ErhI | CCWWGG | 2 cut(s) | 946, 1146 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1086, 1118, 1239, 1271, 3198, 3230 |
| FaqI | GGGAC | 1 cut(s) | 479 |
| FauNDI | CATATG | 2 cut(s) | 367, 559 |
| FbaI | TGATCA | 2 cut(s) | 835, 1950 |
| FblI | GTMKAC | 3 cut(s) | 1893, 3396, 3501 |
| Fnu4HI | GCNGC | 5 cut(s) | 356, 779, 921, 1791, 2245 |
| FokI | GGATG | 8 cut(s) | 152, 632, 1377, 2138, 2516, 2720, 2926, 3329 |
| FriOI | GRGCYC | 1 cut(s) | 3521 |
| Fsp4HI | GCNGC | 5 cut(s) | 356, 779, 921, 1791, 2245 |
| FspBI | CTAG | 6 cut(s) | 510, 728, 2360, 2544, 3125, 3225 |
| GlaI | GCGC | 1 cut(s) | 1275 |
| GluI | GCNGC | 5 cut(s) | 356, 779, 921, 1791, 2245 |
| GsuI | CTGGAG | 3 cut(s) | 1893, 2580, 3349 |
| HaeIII | GGCC | 2 cut(s) | 831, 945 |
| HapII | CCGG | 6 cut(s) | 176, 628, 2393, 2422, 2956, 3356 |
| HgaI | GACGC | 1 cut(s) | 2303 |
| HhaI | GCGC | 1 cut(s) | 1276 |
| Hin6I | GCGC | 1 cut(s) | 1274 |
| HinP1I | GCGC | 1 cut(s) | 1274 |
| HindIII | AAGCTT | 5 cut(s) | 432, 1774, 1940, 1963, 2548 |
| HpaII | CCGG | 6 cut(s) | 176, 628, 2393, 2422, 2956, 3356 |
| HphI | GGTGA | 8 cut(s) | 392, 1011, 1049, 1876, 2504, 2896, 3089, 3194 |
| Hpy99I | CGWCG | 3 cut(s) | 1547, 1607, 1937 |
| HpyAV | CCTTC | 3 cut(s) | 707, 1001, 1577 |
| HpyCH4III | ACNGT | 7 cut(s) | 398, 555, 1133, 1524, 2447, 2866, 2893 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 245, 683 |
| HspAI | GCGC | 1 cut(s) | 1274 |
| KpnI | GGTACC | 1 cut(s) | 3373 |
| Ksp22I | TGATCA | 2 cut(s) | 835, 1950 |
| LmnI | GCTCC | 7 cut(s) | 16, 65, 178, 1654, 2948, 3461, 3524 |
| Lsp1109I | GCAGC | 4 cut(s) | 367, 790, 932, 2231 |
| MaeI | CTAG | 6 cut(s) | 510, 728, 2360, 2544, 3125, 3225 |
| MbiI | CCGCTC | 1 cut(s) | 1004 |
| MfeI | CAATTG | 2 cut(s) | 1954, 1986 |
| MflI | RGATCY | 5 cut(s) | 1684, 1717, 2425, 2661, 2670 |
| MhlI | GDGCHC | 1 cut(s) | 3521 |
| MlsI | TGGCCA | 1 cut(s) | 945 |
| MluNI | TGGCCA | 1 cut(s) | 945 |
| MlyI | GAGTC | 5 cut(s) | 633, 1537, 1900, 3155, 3451 |
| Mox20I | TGGCCA | 1 cut(s) | 945 |
| Mph1103I | ATGCAT | 5 cut(s) | 984, 1072, 1449, 2579, 2786 |
| MroXI | GAANNNNTTC | 4 cut(s) | 267, 855, 1015, 1758 |
| MscI | TGGCCA | 1 cut(s) | 945 |
| MslI | CAYNNNNRTG | 4 cut(s) | 134, 1328, 1536, 2679 |
| Msp20I | TGGCCA | 1 cut(s) | 945 |
| MspA1I | CMGCKG | 1 cut(s) | 2212 |
| MspCI | CTTAAG | 3 cut(s) | 1771, 2765, 3008 |
| MspI | CCGG | 6 cut(s) | 176, 628, 2393, 2422, 2956, 3356 |
| MunI | CAATTG | 2 cut(s) | 1954, 1986 |
| Mva1269I | GAATGC | 4 cut(s) | 193, 1188, 2786, 3043 |
| MvaI | CCWGG | 2 cut(s) | 2667, 3367 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 245, 683 |
| NciI | CCSGG | 8 cut(s) | 176, 629, 2393, 2423, 2956, 2957, 3356, 3357 |
| NcoI | CCATGG | 1 cut(s) | 946 |
| NdeI | CATATG | 2 cut(s) | 367, 559 |
| NlaIV | GGNNCC | 4 cut(s) | 336, 2672, 2774, 3371 |
| NmeAIII | GCCGAG | 1 cut(s) | 2594 |
| NmuCI | GTSAC | 4 cut(s) | 398, 2076, 2507, 3077 |
| NsiI | ATGCAT | 5 cut(s) | 984, 1072, 1449, 2579, 2786 |
| NspI | RCATGY | 2 cut(s) | 551, 1070 |
| NspV | TTCGAA | 1 cut(s) | 3017 |
| PaeI | GCATGC | 1 cut(s) | 1070 |
| PagI | TCATGA | 1 cut(s) | 2680 |
| PasI | CCCWGGG | 1 cut(s) | 2666 |
| PceI | AGGCCT | 1 cut(s) | 831 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 865, 2043 |
| PctI | GAATGC | 4 cut(s) | 193, 1188, 2786, 3043 |
| PdmI | GAANNNNTTC | 4 cut(s) | 267, 855, 1015, 1758 |
| PfoI | TCCNGGA | 2 cut(s) | 2391, 2421 |
| PkrI | GCNGC | 5 cut(s) | 357, 780, 922, 1792, 2246 |
| Ple19I | CGATCG | 1 cut(s) | 2803 |
| PleI | GAGTC | 5 cut(s) | 632, 1536, 1900, 3155, 3450 |
| PpsI | GAGTC | 5 cut(s) | 632, 1536, 1900, 3155, 3450 |
| Ppu21I | YACGTR | 1 cut(s) | 331 |
| Psp124BI | GAGCTC | 1 cut(s) | 3521 |
| Psp6I | CCWGG | 2 cut(s) | 2665, 3365 |
| PspGI | CCWGG | 2 cut(s) | 2665, 3365 |
| PspN4I | GGNNCC | 4 cut(s) | 336, 2672, 2774, 3371 |
| PspPI | GGNCC | 2 cut(s) | 36, 334 |
| PstI | CTGCAG | 1 cut(s) | 780 |
| PstNI | CAGNNNCTG | 3 cut(s) | 544, 1657, 2870 |
| PsuI | RGATCY | 5 cut(s) | 1684, 1717, 2425, 2661, 2670 |
| PvuI | CGATCG | 1 cut(s) | 2803 |
| PvuII | CAGCTG | 1 cut(s) | 2212 |
| RseI | CAYNNNNRTG | 4 cut(s) | 134, 1328, 1536, 2679 |
| SacI | GAGCTC | 1 cut(s) | 3521 |
| SatI | GCNGC | 5 cut(s) | 356, 779, 921, 1791, 2245 |
| Sau96I | GGNCC | 2 cut(s) | 36, 334 |
| ScaI | AGTACT | 2 cut(s) | 1389, 1622 |
| SchI | GAGTC | 5 cut(s) | 633, 1537, 1900, 3155, 3451 |
| SduI | GDGCHC | 1 cut(s) | 3521 |
| SfcI | CTRYAG | 3 cut(s) | 564, 776, 924 |
| SfuI | TTCGAA | 1 cut(s) | 3017 |
| SinI | GGWCC | 2 cut(s) | 36, 334 |
| SmaI | CCCGGG | 2 cut(s) | 2957, 3357 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 134, 1328, 1536, 2679 |
| SmlI | CTYRAG | 7 cut(s) | 6, 1771, 2114, 2753, 2765, 3008, 3514 |
| SmoI | CTYRAG | 7 cut(s) | 6, 1771, 2114, 2753, 2765, 3008, 3514 |
| SphI | GCATGC | 1 cut(s) | 1070 |
| SseBI | AGGCCT | 1 cut(s) | 831 |
| SsiI | CCGC | 4 cut(s) | 76, 842, 1004, 1791 |
| SspI | AATATT | 1 cut(s) | 746 |
| SspMI | CTAG | 6 cut(s) | 510, 728, 2360, 2544, 3125, 3225 |
| SstI | GAGCTC | 1 cut(s) | 3521 |
| StuI | AGGCCT | 1 cut(s) | 831 |
| StyI | CCWWGG | 2 cut(s) | 946, 1146 |
| TaaI | ACNGT | 7 cut(s) | 398, 555, 1133, 1524, 2447, 2866, 2893 |
| TatI | WGTACW | 6 cut(s) | 871, 1387, 1549, 1620, 1806, 3289 |
| TauI | GCSGC | 1 cut(s) | 1793 |
| TscAI | CASTG | 1 cut(s) | 2995 |
| TseFI | GTSAC | 4 cut(s) | 398, 2076, 2507, 3077 |
| TseI | GCWGC | 4 cut(s) | 355, 778, 920, 2244 |
| Tsp45I | GTSAC | 4 cut(s) | 398, 2076, 2507, 3077 |
| TspGWI | ACGGA | 2 cut(s) | 50, 1377 |
| TspMI | CCCGGG | 2 cut(s) | 2955, 3355 |
| TspRI | CASTG | 1 cut(s) | 2995 |
| Vha464I | CTTAAG | 3 cut(s) | 1771, 2765, 3008 |
| VpaK11BI | GGWCC | 2 cut(s) | 36, 334 |
| XapI | RAATTY | 8 cut(s) | 21, 207, 695, 733, 2349, 3013, 3021, 3453 |
| XceI | RCATGY | 2 cut(s) | 551, 1070 |
| XmaI | CCCGGG | 2 cut(s) | 2955, 3355 |
| XmiI | GTMKAC | 3 cut(s) | 1893, 3396, 3501 |
| XmnI | GAANNNNTTC | 4 cut(s) | 267, 855, 1015, 1758 |
| XspI | CTAG | 6 cut(s) | 510, 728, 2360, 2544, 3125, 3225 |
| ZrmI | AGTACT | 2 cut(s) | 1389, 1622 |
| Zsp2I | ATGCAT | 5 cut(s) | 984, 1072, 1449, 2579, 2786 |