pycom111g02000

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Reverse (-)
1191108 .. 1192814
1707 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g02000.2

Sequence Viewer

Length: 1167 bp
ATGAAAGGGATGAAGATCGAAATGAGGTCAAGCAGTGGAGAGAGCGATCTTAAGGCTTCTGCAGATTTGGGCGGCTGGAATCTCAAAACCACGGCCGACAGGTGTGAAGGAGTGTTTATCGAGAAAATTGTTGGGGACGTCAAGGGACTATTGAAAACCATAGATTTAAAAGAAGCCAAGCACTCAGTTGGAATGGCTTTTCATGTGCAAGAATTCAGTACTAAATACTTAGACGTTGGAGGTTCACCTGATGTTCAAATAATTGGAATTTGGGGTATGGGCGGTGTAGGTAAAACAACGCTTGCCAGAGCCGTTTGTAGCAATTATCAACATAGTTTTAGTCGTCAATGTTACCTTGAAGATGTGAGGAGTAAAAAGAAAGAGATGGTTAGTTTGCAAGAACAATTTCTTCGAGATATTTTAAAACAGTCTGACATTAAGGTAAGCAGTGTTGCCAAAGGGACCAAAGAAATCAAGAAAAGACTTGGGAGCATGAAGGTACTTGTCGTGGTTGATGACATAGATGATGCAGACCAATTAGATGAATTGGCAATAGAACATGAATCGTTTGGTCCAGGAAGCAGAATTATCATAACAACAAGAGATGAACATGTGTTGAATATACAAAAGGTGGATAAAAAATGTAAGGCACAAACAATGACAGAGAAAGAAGCTTTTGAGCTCCTTAGTTGGCATGCCTTTGGAAATGATTATCCCGATAAAGAATATATTGAATTGGCAAGAGATATTGTTGATTATTGTGGAGGATTGCCCCTAGCTCTGAAAGTTGTTGGCCGTTTGTTGGCTAAGAAAAAGAGTAAAACCATATGGGAAAGTACATTGGATAAATTGAGAAATATTGCAGACAGAAAAATTCATGAAACGCTTAAATTAAGTTACGATGGATTACGTGATGATCATGAAAAGGGTGTGTTCCTTGACATATCTAATTTTTTTATTGGAGAGCATAAAAGTGCGGTCATGGCAATATTGGATGGTTGTTATCGTTTTTCTGTAGAAGCAGAAATTACCACACTCTGCGATCGATGTCTCTTATATATTGATGAAGCGGAAAATTTGAGGATGCATGATTTGATTCGAGATATGGGAAGAGAAATTGTGCGGGCAGAATCTCCTGTGGAATTGGGAAAACGTAGTCGATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

389

Amino Acids

43.71

Weight (kDa)

6.4

Isoelectric Point (pI)

33.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 141
AciI CCGC 5 cut(s) 72, 282, 977, 1070, 1123
AcoI YGGCCR 2 cut(s) 93, 793
AcsI RAATTY 4 cut(s) 212, 267, 873, 1075
AcyI GRCGYC 1 cut(s) 138
AfaI GTAC 3 cut(s) 220, 501, 838
AfiI CCNNNNNNNGG 1 cut(s) 802
AflII CTTAAG 1 cut(s) 50
AflIII ACRYGT 1 cut(s) 610
AgsI TTSAA 5 cut(s) 154, 257, 359, 619, 734
AjnI CCWGG 1 cut(s) 574
AluBI AGCT 3 cut(s) 674, 682, 779
AluI AGCT 3 cut(s) 674, 682, 779
Alw21I GWGCWC 1 cut(s) 684
Alw26I GTCTC 1 cut(s) 1055
AoxI GGCC 2 cut(s) 93, 793
ApoI RAATTY 4 cut(s) 212, 267, 873, 1075
Asp700I GAANNNNTTC 1 cut(s) 405
AspS9I GGNCC 2 cut(s) 462, 572
AsuHPI GGTGA 1 cut(s) 237
AvaII GGWCC 2 cut(s) 462, 572
BanII GRGCYC 1 cut(s) 684
Bbv12I GWGCWC 1 cut(s) 684
BccI CCATC 3 cut(s) 379, 896, 989
BceAI ACGGC 3 cut(s) 108, 296, 780
BciT130I CCWGG 1 cut(s) 576
BclI TGATCA 1 cut(s) 916
BcoDI GTCTC 1 cut(s) 1055
BfaI CTAG 1 cut(s) 776
BfmI CTRYAG 2 cut(s) 60, 1014
BfrI CTTAAG 1 cut(s) 50
BisI GCNGC 1 cut(s) 73
BlsI GCNGC 1 cut(s) 74
BmcAI AGTACT 1 cut(s) 220
Bme1390I CCNGG 1 cut(s) 576
Bme18I GGWCC 2 cut(s) 462, 572
BmgT120I GGNCC 2 cut(s) 462, 572
BmiI GGNNCC 1 cut(s) 463
BmrFI CCNGG 1 cut(s) 576
BmsI GCATC 2 cut(s) 517, 1074
Bsa29I ATCGAT 1 cut(s) 1045
BsaAI YACGTR 1 cut(s) 911
BsaBI GATNNNNATC 1 cut(s) 14
BsaHI GRCGYC 1 cut(s) 138
BsaJI CCNNGG 1 cut(s) 90
Bsc4I CCNNNNNNNGG 1 cut(s) 802
Bse8I GATNNNNATC 1 cut(s) 14
BseBI CCWGG 1 cut(s) 576
BseCI ATCGAT 1 cut(s) 1045
BseDI CCNNGG 1 cut(s) 90
BseGI GGATG 3 cut(s) 15, 1000, 1089
BseJI GATNNNNATC 1 cut(s) 14
BseLI CCNNNNNNNGG 1 cut(s) 802
BseMII CTCAG 1 cut(s) 198
BseRI GAGGAG 1 cut(s) 382
BseX3I CGGCCG 1 cut(s) 93
Bsh1285I CGRYCG 2 cut(s) 96, 1045
BshFI GGCC 2 cut(s) 95, 795
BshVI ATCGAT 1 cut(s) 1045
BsiEI CGRYCG 2 cut(s) 96, 1045
BsiHKAI GWGCWC 1 cut(s) 684
BslFI GGGAC 3 cut(s) 149, 159, 475
BslI CCNNNNNNNGG 1 cut(s) 802
BsmAI GTCTC 1 cut(s) 1055
BsmFI GGGAC 3 cut(s) 149, 159, 475
BsnI GGCC 2 cut(s) 95, 795
Bsp1286I GDGCHC 1 cut(s) 684
Bsp143I GATC 4 cut(s) 15, 46, 916, 1042
BspACI CCGC 5 cut(s) 72, 282, 977, 1070, 1123
BspANI GGCC 2 cut(s) 95, 795
BspCNI CTCAG 1 cut(s) 197
BspDI ATCGAT 1 cut(s) 1045
BspHI TCATGA 2 cut(s) 877, 919
BspLI GGNNCC 1 cut(s) 463
BspMAI CTGCAG 1 cut(s) 64
BspTI CTTAAG 1 cut(s) 50
BssECI CCNNGG 1 cut(s) 90
BssMI GATC 4 cut(s) 15, 46, 916, 1042
BssNI GRCGYC 1 cut(s) 138
Bst2UI CCWGG 1 cut(s) 576
Bst4CI ACNGT 1 cut(s) 429
Bst6I CTCTTC 1 cut(s) 1105
BstACI GRCGYC 1 cut(s) 138
BstAFI CTTAAG 1 cut(s) 50
BstBAI YACGTR 1 cut(s) 911
BstC8I GCNNGC 3 cut(s) 303, 696, 1125
BstDEI CTNAG 4 cut(s) 184, 229, 686, 807
BstDSI CCRYGG 1 cut(s) 90
BstF5I GGATG 3 cut(s) 15, 1000, 1089
BstKTI GATC 4 cut(s) 18, 49, 919, 1045
BstMAI GTCTC 1 cut(s) 1055
BstMBI GATC 4 cut(s) 15, 46, 916, 1042
BstMCI CGRYCG 2 cut(s) 96, 1045
BstMWI GCNNNNNNNGC 1 cut(s) 983
BstNI CCWGG 1 cut(s) 576
BstNSI RCATGY 2 cut(s) 614, 698
BstSCI CCNGG 1 cut(s) 574
BstSFI CTRYAG 2 cut(s) 60, 1014
BstZI CGGCCG 1 cut(s) 93
Bsu15I ATCGAT 1 cut(s) 1045
BsuRI GGCC 2 cut(s) 95, 795
BsuTUI ATCGAT 1 cut(s) 1045
BtgI CCRYGG 1 cut(s) 90
BtsCI GGATG 3 cut(s) 15, 1000, 1089
BtsI GCAGTG 2 cut(s) 40, 454
BtsIMutI CAGTG 2 cut(s) 40, 454
Cac8I GCNNGC 3 cut(s) 303, 696, 1125
CciI TCATGA 2 cut(s) 877, 919
Cfr13I GGNCC 2 cut(s) 462, 572
ClaI ATCGAT 1 cut(s) 1045
Csp6I GTAC 3 cut(s) 219, 500, 837
CviAII CATG 9 cut(s) 203, 493, 560, 611, 695, 878, 920, 982, 1088
CviQI GTAC 3 cut(s) 219, 500, 837
DdeI CTNAG 4 cut(s) 184, 229, 686, 807
DpnI GATC 4 cut(s) 17, 48, 918, 1044
DpnII GATC 4 cut(s) 15, 46, 916, 1042
DraI TTTAAA 2 cut(s) 168, 423
EaeI YGGCCR 2 cut(s) 93, 793
EagI CGGCCG 1 cut(s) 93
Eam1104I CTCTTC 1 cut(s) 1105
EarI CTCTTC 1 cut(s) 1105
Ecl136II GAGCTC 1 cut(s) 682
EclXI CGGCCG 1 cut(s) 93
Eco24I GRGCYC 1 cut(s) 684
Eco47I GGWCC 2 cut(s) 462, 572
Eco52I CGGCCG 1 cut(s) 93
Eco53kI GAGCTC 1 cut(s) 682
EcoICRI GAGCTC 1 cut(s) 682
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 1 cut(s) 574
EcoT22I ATGCAT 1 cut(s) 1089
EcoT38I GRGCYC 1 cut(s) 684
FaeI CATG 9 cut(s) 206, 496, 563, 614, 698, 881, 923, 985, 1091
FaqI GGGAC 3 cut(s) 149, 159, 475
FatI CATG 9 cut(s) 202, 492, 559, 610, 694, 877, 919, 981, 1087
FauI CCCGC 1 cut(s) 1116
FauNDI CATATG 1 cut(s) 827
FbaI TGATCA 1 cut(s) 916
Fnu4HI GCNGC 1 cut(s) 73
FokI GGATG 3 cut(s) 22, 1007, 1096
FriOI GRGCYC 1 cut(s) 684
Fsp4HI GCNGC 1 cut(s) 73
FspBI CTAG 1 cut(s) 776
GluI GCNGC 1 cut(s) 73
HaeIII GGCC 2 cut(s) 95, 795
Hin1I GRCGYC 1 cut(s) 138
Hin1II CATG 9 cut(s) 206, 496, 563, 614, 698, 881, 923, 985, 1091
HindIII AAGCTT 1 cut(s) 672
HinfI GANTC 4 cut(s) 79, 563, 1096, 1130
HphI GGTGA 1 cut(s) 237
Hpy166II GTNNAC 1 cut(s) 245
Hpy188I TCNGA 2 cut(s) 433, 783
Hpy188III TCNNGA 7 cut(s) 121, 413, 475, 716, 878, 920, 1100
Hpy8I GTNNAC 1 cut(s) 245
HpyAV CCTTC 2 cut(s) 101, 490
HpyCH4III ACNGT 1 cut(s) 429
HpyCH4IV ACGT 4 cut(s) 138, 234, 910, 1153
HpyCH4V TGCA 6 cut(s) 62, 208, 397, 530, 863, 1087
HpyF10VI GCNNNNNNNGC 1 cut(s) 983
HpyF3I CTNAG 4 cut(s) 184, 229, 686, 807
HpySE526I ACGT 4 cut(s) 138, 234, 910, 1153
Hsp92I GRCGYC 1 cut(s) 138
Hsp92II CATG 9 cut(s) 206, 496, 563, 614, 698, 881, 923, 985, 1091
Ksp22I TGATCA 1 cut(s) 916
Kzo9I GATC 4 cut(s) 15, 46, 916, 1042
LmnI GCTCC 2 cut(s) 489, 687
LpnPI CCDG 7 cut(s) 61, 85, 261, 319, 561, 588, 1149
LweI GCATC 2 cut(s) 517, 1074
MaeI CTAG 1 cut(s) 776
MaeII ACGT 4 cut(s) 138, 234, 910, 1153
MaeIII GTNAC 2 cut(s) 350, 896
MalI GATC 4 cut(s) 17, 48, 918, 1044
MboI GATC 4 cut(s) 15, 46, 916, 1042
MboII GAAGA 4 cut(s) 25, 371, 401, 1122
MhlI GDGCHC 1 cut(s) 684
MmeI TCCRAC 2 cut(s) 169, 217
MnlI CCTC 5 cut(s) 18, 233, 360, 758, 1074
Mph1103I ATGCAT 1 cut(s) 1089
MroXI GAANNNNTTC 1 cut(s) 405
MseI TTAA 6 cut(s) 51, 167, 422, 438, 888, 893
MslI CAYNNNNRTG 1 cut(s) 972
MspCI CTTAAG 1 cut(s) 50
MspR9I CCNGG 1 cut(s) 576
MvaI CCWGG 1 cut(s) 576
MwoI GCNNNNNNNGC 1 cut(s) 983
NdeI CATATG 1 cut(s) 827
NdeII GATC 4 cut(s) 15, 46, 916, 1042
NlaIII CATG 9 cut(s) 206, 496, 563, 614, 698, 881, 923, 985, 1091
NlaIV GGNNCC 1 cut(s) 463
NsiI ATGCAT 1 cut(s) 1089
NspI RCATGY 2 cut(s) 614, 698
PaeI GCATGC 1 cut(s) 698
PagI TCATGA 2 cut(s) 877, 919
PciI ACATGT 1 cut(s) 610
PdmI GAANNNNTTC 1 cut(s) 405
PfeI GAWTC 4 cut(s) 79, 563, 1096, 1130
PfoI TCCNGGA 1 cut(s) 574
PkrI GCNGC 1 cut(s) 74
Ple19I CGATCG 1 cut(s) 1045
Ppu21I YACGTR 1 cut(s) 911
PscI ACATGT 1 cut(s) 610
Psp124BI GAGCTC 1 cut(s) 684
Psp6I CCWGG 1 cut(s) 574
PspGI CCWGG 1 cut(s) 574
PspN4I GGNNCC 1 cut(s) 463
PspPI GGNCC 2 cut(s) 462, 572
PstI CTGCAG 1 cut(s) 64
PvuI CGATCG 1 cut(s) 1045
RsaI GTAC 3 cut(s) 220, 501, 838
RsaNI GTAC 3 cut(s) 219, 500, 837
RseI CAYNNNNRTG 1 cut(s) 972
SacI GAGCTC 1 cut(s) 684
SaqAI TTAA 6 cut(s) 51, 167, 422, 438, 888, 893
SatI GCNGC 1 cut(s) 73
Sau3AI GATC 4 cut(s) 15, 46, 916, 1042
Sau96I GGNCC 2 cut(s) 462, 572
ScaI AGTACT 1 cut(s) 220
ScrFI CCNGG 1 cut(s) 576
SduI GDGCHC 1 cut(s) 684
SfaNI GCATC 2 cut(s) 517, 1074
SfcI CTRYAG 2 cut(s) 60, 1014
SinI GGWCC 2 cut(s) 462, 572
SmiMI CAYNNNNRTG 1 cut(s) 972
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
SphI GCATGC 1 cut(s) 698
SsiI CCGC 5 cut(s) 72, 282, 977, 1070, 1123
SspI AATATT 2 cut(s) 859, 990
SspMI CTAG 1 cut(s) 776
SstI GAGCTC 1 cut(s) 684
StyD4I CCNGG 1 cut(s) 574
TaaI ACNGT 1 cut(s) 429
TaiI ACGT 4 cut(s) 141, 237, 913, 1156
TaqI TCGA 6 cut(s) 18, 120, 412, 1045, 1099, 1159
TatI WGTACW 2 cut(s) 218, 836
TauI GCSGC 1 cut(s) 75
TfiI GAWTC 4 cut(s) 79, 563, 1096, 1130
Tru1I TTAA 6 cut(s) 51, 167, 422, 438, 888, 893
Tru9I TTAA 6 cut(s) 51, 167, 422, 438, 888, 893
TscAI CASTG 2 cut(s) 40, 454
TspRI CASTG 2 cut(s) 40, 454
Vha464I CTTAAG 1 cut(s) 50
VpaK11BI GGWCC 2 cut(s) 462, 572
XapI RAATTY 4 cut(s) 212, 267, 873, 1075
XceI RCATGY 2 cut(s) 614, 698
XmnI GAANNNNTTC 1 cut(s) 405
XspI CTAG 1 cut(s) 776
ZraI GACGTC 1 cut(s) 139
ZrmI AGTACT 1 cut(s) 220
Zsp2I ATGCAT 1 cut(s) 1089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.