TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 819 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 48 |
| AccI | GTMKAC | 1 cut(s) | 1117 |
| AccII | CGCG | 3 cut(s) | 91, 708, 870 |
| AciI | CCGC | 2 cut(s) | 254, 1271 |
| AclWI | GGATC | 4 cut(s) | 341, 751, 1300, 1731 |
| AcoI | YGGCCR | 3 cut(s) | 505, 678, 1593 |
| AcsI | RAATTY | 7 cut(s) | 496, 568, 768, 825, 842, 1496, 1723 |
| AcuI | CTGAAG | 3 cut(s) | 58, 1395, 1719 |
| AfaI | GTAC | 1 cut(s) | 56 |
| AfeI | AGCGCT | 1 cut(s) | 1278 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 48, 1220, 1663 |
| AflIII | ACRYGT | 2 cut(s) | 319, 673 |
| AjiI | CACGTC | 1 cut(s) | 440 |
| AjnI | CCWGG | 2 cut(s) | 141, 1630 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1051, 1083, 1605, 1637 |
| Alw26I | GTCTC | 1 cut(s) | 430 |
| AlwI | GGATC | 4 cut(s) | 341, 751, 1300, 1731 |
| Aor51HI | AGCGCT | 1 cut(s) | 1278 |
| AoxI | GGCC | 5 cut(s) | 505, 678, 970, 1593, 1743 |
| ApeKI | GCWGC | 3 cut(s) | 119, 491, 803 |
| ApoI | RAATTY | 7 cut(s) | 496, 568, 768, 825, 842, 1496, 1723 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1451, 1483 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 198, 390, 700 |
| AspLEI | GCGC | 2 cut(s) | 93, 1279 |
| AsuHPI | GGTGA | 4 cut(s) | 92, 295, 646, 1619 |
| AsuII | TTCGAA | 1 cut(s) | 1585 |
| AsuNHI | GCTAGC | 1 cut(s) | 1273 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 949, 982 |
| BalI | TGGCCA | 3 cut(s) | 507, 680, 1595 |
| BauI | CACGAG | 2 cut(s) | 103, 1104 |
| BbsI | GAAGAC | 2 cut(s) | 90, 229 |
| BbvI | GCAGC | 3 cut(s) | 131, 478, 790 |
| BccI | CCATC | 4 cut(s) | 519, 772, 1355, 1481 |
| BciT130I | CCWGG | 2 cut(s) | 143, 1632 |
| BciVI | GTATCC | 1 cut(s) | 131 |
| BcoDI | GTCTC | 1 cut(s) | 430 |
| BfaI | CTAG | 2 cut(s) | 1274, 1403 |
| BfoI | RGCGCY | 1 cut(s) | 1280 |
| BfuI | GTATCC | 1 cut(s) | 131 |
| BisI | GCNGC | 3 cut(s) | 120, 492, 804 |
| BlsI | GCNGC | 3 cut(s) | 121, 493, 805 |
| Bme1390I | CCNGG | 2 cut(s) | 143, 1632 |
| BmgBI | CACGTC | 1 cut(s) | 440 |
| BmiI | GGNNCC | 1 cut(s) | 1655 |
| BmrFI | CCNGG | 2 cut(s) | 143, 1632 |
| BmrI | ACTGGG | 1 cut(s) | 320 |
| BmsI | GCATC | 4 cut(s) | 293, 862, 1036, 1514 |
| BmtI | GCTAGC | 1 cut(s) | 1277 |
| BmuI | ACTGGG | 1 cut(s) | 320 |
| BpiI | GAAGAC | 2 cut(s) | 90, 229 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 463, 495, 465, 497 |
| Bpu14I | TTCGAA | 1 cut(s) | 1585 |
| BpuEI | CTTGAG | 3 cut(s) | 88, 1196, 1699 |
| Bsa29I | ATCGAT | 2 cut(s) | 699, 1735 |
| BsaJI | CCNNGG | 2 cut(s) | 1630, 1740 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 48, 1220, 1663 |
| Bse1I | ACTGG | 2 cut(s) | 315, 1047 |
| Bse3DI | GCAATG | 1 cut(s) | 100 |
| BseBI | CCWGG | 2 cut(s) | 143, 1632 |
| BseCI | ATCGAT | 2 cut(s) | 699, 1735 |
| BseDI | CCNNGG | 2 cut(s) | 1630, 1740 |
| BseGI | GGATG | 4 cut(s) | 411, 783, 1051, 1496 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 48, 1220, 1663 |
| BseMI | GCAATG | 1 cut(s) | 100 |
| BseMII | CTCAG | 1 cut(s) | 1396 |
| BseNI | ACTGG | 2 cut(s) | 315, 1047 |
| BseRI | GAGGAG | 1 cut(s) | 22 |
| BseXI | GCAGC | 3 cut(s) | 131, 478, 790 |
| BsgI | GTGCAG | 1 cut(s) | 319 |
| Bsh1236I | CGCG | 3 cut(s) | 91, 708, 870 |
| BshFI | GGCC | 5 cut(s) | 507, 680, 972, 1595, 1745 |
| BshVI | ATCGAT | 2 cut(s) | 699, 1735 |
| BslFI | GGGAC | 1 cut(s) | 1197 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 48, 1220, 1663 |
| BsmAI | GTCTC | 1 cut(s) | 430 |
| BsmBI | CGTCTC | 1 cut(s) | 430 |
| BsmFI | GGGAC | 1 cut(s) | 1197 |
| BsnI | GGCC | 5 cut(s) | 507, 680, 972, 1595, 1745 |
| Bsp119I | TTCGAA | 1 cut(s) | 1585 |
| Bsp143I | GATC | 9 cut(s) | 163, 288, 346, 743, 889, 1292, 1310, 1732, 1736 |
| Bsp68I | TCGCGA | 1 cut(s) | 870 |
| BspACI | CCGC | 2 cut(s) | 254, 1271 |
| BspANI | GGCC | 5 cut(s) | 507, 680, 972, 1595, 1745 |
| BspCNI | CTCAG | 1 cut(s) | 1395 |
| BspDI | ATCGAT | 2 cut(s) | 699, 1735 |
| BspFNI | CGCG | 3 cut(s) | 91, 708, 870 |
| BspLI | GGNNCC | 1 cut(s) | 1655 |
| BspOI | GCTAGC | 1 cut(s) | 1277 |
| BspPI | GGATC | 4 cut(s) | 341, 751, 1300, 1731 |
| BspT104I | TTCGAA | 1 cut(s) | 1585 |
| BsrDI | GCAATG | 1 cut(s) | 100 |
| BsrI | ACTGG | 2 cut(s) | 315, 1047 |
| BssECI | CCNNGG | 2 cut(s) | 1630, 1740 |
| BssMI | GATC | 9 cut(s) | 163, 288, 346, 743, 889, 1292, 1310, 1732, 1736 |
| BssSI | CACGAG | 2 cut(s) | 103, 1104 |
| BssT1I | CCWWGG | 1 cut(s) | 1740 |
| Bst2BI | CACGAG | 2 cut(s) | 103, 1104 |
| Bst2UI | CCWGG | 2 cut(s) | 143, 1632 |
| Bst4CI | ACNGT | 4 cut(s) | 198, 1522, 1549, 1658 |
| Bst6I | CTCTTC | 3 cut(s) | 28, 207, 530 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1579 |
| BstBI | TTCGAA | 1 cut(s) | 1585 |
| BstC8I | GCNNGC | 2 cut(s) | 1194, 1275 |
| BstDEI | CTNAG | 3 cut(s) | 834, 1149, 1382 |
| BstEII | GGTNACC | 1 cut(s) | 1625 |
| BstF5I | GGATG | 4 cut(s) | 411, 783, 1051, 1496 |
| BstFNI | CGCG | 3 cut(s) | 91, 708, 870 |
| BstH2I | RGCGCY | 1 cut(s) | 1280 |
| BstHHI | GCGC | 2 cut(s) | 93, 1279 |
| BstKTI | GATC | 9 cut(s) | 166, 291, 349, 746, 892, 1295, 1313, 1735, 1739 |
| BstMAI | GTCTC | 1 cut(s) | 430 |
| BstMBI | GATC | 9 cut(s) | 163, 288, 346, 743, 889, 1292, 1310, 1732, 1736 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 14, 105, 809, 1145, 1579 |
| BstNI | CCWGG | 2 cut(s) | 143, 1632 |
| BstNSI | RCATGY | 5 cut(s) | 323, 359, 677, 1143, 1196 |
| BstPI | GGTNACC | 1 cut(s) | 1625 |
| BstSCI | CCNGG | 2 cut(s) | 141, 1630 |
| BstUI | CGCG | 3 cut(s) | 91, 708, 870 |
| BstV1I | GCAGC | 3 cut(s) | 131, 478, 790 |
| BstV2I | GAAGAC | 2 cut(s) | 90, 229 |
| BstX2I | RGATCY | 1 cut(s) | 1292 |
| BstYI | RGATCY | 1 cut(s) | 1292 |
| Bsu15I | ATCGAT | 2 cut(s) | 699, 1735 |
| BsuI | GTATCC | 1 cut(s) | 131 |
| BsuRI | GGCC | 5 cut(s) | 507, 680, 972, 1595, 1745 |
| BsuTUI | ATCGAT | 2 cut(s) | 699, 1735 |
| BtgZI | GCGATG | 1 cut(s) | 885 |
| BtrI | CACGTC | 1 cut(s) | 440 |
| BtsCI | GGATG | 4 cut(s) | 411, 783, 1051, 1496 |
| BtsIMutI | CAGTG | 1 cut(s) | 1518 |
| BtuMI | TCGCGA | 1 cut(s) | 870 |
| Cac8I | GCNNGC | 2 cut(s) | 1194, 1275 |
| CfoI | GCGC | 2 cut(s) | 93, 1279 |
| ClaI | ATCGAT | 2 cut(s) | 699, 1735 |
| CsiI | ACCWGGT | 1 cut(s) | 141 |
| Csp6I | GTAC | 1 cut(s) | 55 |
| CviQI | GTAC | 1 cut(s) | 55 |
| DdeI | CTNAG | 3 cut(s) | 834, 1149, 1382 |
| DpnI | GATC | 9 cut(s) | 165, 290, 348, 745, 891, 1294, 1312, 1734, 1738 |
| DpnII | GATC | 9 cut(s) | 163, 288, 346, 743, 889, 1292, 1310, 1732, 1736 |
| DraI | TTTAAA | 1 cut(s) | 1201 |
| EaeI | YGGCCR | 3 cut(s) | 505, 678, 1593 |
| Eam1104I | CTCTTC | 3 cut(s) | 28, 207, 530 |
| EarI | CTCTTC | 3 cut(s) | 28, 207, 530 |
| Eco130I | CCWWGG | 1 cut(s) | 1740 |
| Eco32I | GATATC | 2 cut(s) | 925, 1226 |
| Eco47III | AGCGCT | 1 cut(s) | 1278 |
| Eco57I | CTGAAG | 3 cut(s) | 58, 1395, 1719 |
| Eco91I | GGTNACC | 1 cut(s) | 1625 |
| EcoO65I | GGTNACC | 1 cut(s) | 1625 |
| EcoRI | GAATTC | 1 cut(s) | 842 |
| EcoRII | CCWGG | 2 cut(s) | 141, 1630 |
| EcoRV | GATATC | 2 cut(s) | 925, 1226 |
| EcoT14I | CCWWGG | 1 cut(s) | 1740 |
| EcoT22I | ATGCAT | 1 cut(s) | 1575 |
| ErhI | CCWWGG | 1 cut(s) | 1740 |
| Esp3I | CGTCTC | 1 cut(s) | 430 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1158, 1190, 1212, 1244 |
| FaqI | GGGAC | 1 cut(s) | 1197 |
| FblI | GTMKAC | 1 cut(s) | 1117 |
| Fnu4HI | GCNGC | 3 cut(s) | 120, 492, 804 |
| FokI | GGATG | 4 cut(s) | 398, 790, 1058, 1503 |
| Fsp4HI | GCNGC | 3 cut(s) | 120, 492, 804 |
| FspBI | CTAG | 2 cut(s) | 1274, 1403 |
| GlaI | GCGC | 2 cut(s) | 92, 1278 |
| GluI | GCNGC | 3 cut(s) | 120, 492, 804 |
| HaeII | RGCGCY | 1 cut(s) | 1280 |
| HaeIII | GGCC | 5 cut(s) | 507, 680, 972, 1595, 1745 |
| HhaI | GCGC | 2 cut(s) | 93, 1279 |
| Hin6I | GCGC | 2 cut(s) | 91, 1277 |
| HinP1I | GCGC | 2 cut(s) | 91, 1277 |
| HincII | GTYRAC | 2 cut(s) | 958, 1018 |
| HindII | GTYRAC | 2 cut(s) | 958, 1018 |
| HindIII | AAGCTT | 2 cut(s) | 15, 1390 |
| HinfI | GANTC | 7 cut(s) | 215, 257, 696, 701, 1380, 1406, 1515 |
| HphI | GGTGA | 4 cut(s) | 92, 295, 646, 1619 |
| Hpy166II | GTNNAC | 6 cut(s) | 958, 1018, 1118, 1132, 1268, 1532 |
| Hpy188I | TCNGA | 9 cut(s) | 342, 396, 534, 577, 922, 1240, 1385, 1414, 1612 |
| Hpy8I | GTNNAC | 6 cut(s) | 958, 1018, 1118, 1132, 1268, 1532 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 1662 |
| HpyAV | CCTTC | 7 cut(s) | 360, 956, 1053, 1391, 1411, 1547, 1703 |
| HpyCH4III | ACNGT | 4 cut(s) | 198, 1522, 1549, 1658 |
| HpyCH4IV | ACGT | 3 cut(s) | 60, 439, 1114 |
| HpyCH4V | TGCA | 7 cut(s) | 300, 306, 494, 904, 1049, 1505, 1573 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 14, 105, 809, 1145, 1579 |
| HpyF3I | CTNAG | 3 cut(s) | 834, 1149, 1382 |
| HpySE526I | ACGT | 3 cut(s) | 60, 439, 1114 |
| HspAI | GCGC | 2 cut(s) | 91, 1277 |
| Kzo9I | GATC | 9 cut(s) | 163, 288, 346, 743, 889, 1292, 1310, 1732, 1736 |
| Lsp1109I | GCAGC | 3 cut(s) | 131, 478, 790 |
| LweI | GCATC | 4 cut(s) | 293, 862, 1036, 1514 |
| MabI | ACCWGGT | 1 cut(s) | 141 |
| MaeI | CTAG | 2 cut(s) | 1274, 1403 |
| MaeII | ACGT | 3 cut(s) | 60, 439, 1114 |
| MaeIII | GTNAC | 3 cut(s) | 1471, 1543, 1625 |
| MalI | GATC | 9 cut(s) | 165, 290, 348, 745, 891, 1294, 1312, 1734, 1738 |
| MboI | GATC | 9 cut(s) | 163, 288, 346, 743, 889, 1292, 1310, 1732, 1736 |
| MfeI | CAATTG | 1 cut(s) | 1334 |
| MflI | RGATCY | 1 cut(s) | 1292 |
| MlsI | TGGCCA | 3 cut(s) | 507, 680, 1595 |
| MluNI | TGGCCA | 3 cut(s) | 507, 680, 1595 |
| MlyI | GAGTC | 2 cut(s) | 224, 1374 |
| MmeI | TCCRAC | 3 cut(s) | 673, 745, 1036 |
| Mox20I | TGGCCA | 3 cut(s) | 507, 680, 1595 |
| Mph1103I | ATGCAT | 1 cut(s) | 1575 |
| MroXI | GAANNNNTTC | 3 cut(s) | 198, 390, 700 |
| MscI | TGGCCA | 3 cut(s) | 507, 680, 1595 |
| MseI | TTAA | 5 cut(s) | 125, 516, 618, 1200, 1305 |
| Msp20I | TGGCCA | 3 cut(s) | 507, 680, 1595 |
| MspA1I | CMGCKG | 1 cut(s) | 803 |
| MspR9I | CCNGG | 2 cut(s) | 143, 1632 |
| MunI | CAATTG | 1 cut(s) | 1334 |
| MvaI | CCWGG | 2 cut(s) | 143, 1632 |
| MvnI | CGCG | 3 cut(s) | 91, 708, 870 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 14, 105, 809, 1145, 1579 |
| NdeII | GATC | 9 cut(s) | 163, 288, 346, 743, 889, 1292, 1310, 1732, 1736 |
| NheI | GCTAGC | 1 cut(s) | 1273 |
| NlaIV | GGNNCC | 1 cut(s) | 1655 |
| NmuCI | GTSAC | 2 cut(s) | 1471, 1625 |
| NruI | TCGCGA | 1 cut(s) | 870 |
| NsiI | ATGCAT | 1 cut(s) | 1575 |
| NspI | RCATGY | 5 cut(s) | 323, 359, 677, 1143, 1196 |
| NspV | TTCGAA | 1 cut(s) | 1585 |
| PaeI | GCATGC | 1 cut(s) | 1196 |
| PciI | ACATGT | 2 cut(s) | 319, 673 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 705, 1111 |
| PdmI | GAANNNNTTC | 3 cut(s) | 198, 390, 700 |
| PfeI | GAWTC | 5 cut(s) | 257, 696, 701, 1406, 1515 |
| PflFI | GACNNNGTC | 1 cut(s) | 1469 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 48 |
| PkrI | GCNGC | 3 cut(s) | 121, 493, 805 |
| PleI | GAGTC | 2 cut(s) | 223, 1374 |
| PpsI | GAGTC | 2 cut(s) | 223, 1374 |
| PscI | ACATGT | 2 cut(s) | 319, 673 |
| PsiI | TTATAA | 1 cut(s) | 819 |
| Psp6I | CCWGG | 2 cut(s) | 141, 1630 |
| PspEI | GGTNACC | 1 cut(s) | 1625 |
| PspGI | CCWGG | 2 cut(s) | 141, 1630 |
| PspN4I | GGNNCC | 1 cut(s) | 1655 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1104, 1136 |
| PsuI | RGATCY | 1 cut(s) | 1292 |
| PsyI | GACNNNGTC | 1 cut(s) | 1469 |
| PvuII | CAGCTG | 1 cut(s) | 803 |
| RruI | TCGCGA | 1 cut(s) | 870 |
| RsaI | GTAC | 1 cut(s) | 56 |
| RsaNI | GTAC | 1 cut(s) | 55 |
| SaqAI | TTAA | 5 cut(s) | 125, 516, 618, 1200, 1305 |
| SatI | GCNGC | 3 cut(s) | 120, 492, 804 |
| Sau3AI | GATC | 9 cut(s) | 163, 288, 346, 743, 889, 1292, 1310, 1732, 1736 |
| SchI | GAGTC | 2 cut(s) | 224, 1374 |
| ScrFI | CCNGG | 2 cut(s) | 143, 1632 |
| SexAI | ACCWGGT | 1 cut(s) | 141 |
| SfaNI | GCATC | 4 cut(s) | 293, 862, 1036, 1514 |
| SfuI | TTCGAA | 1 cut(s) | 1585 |
| SmlI | CTYRAG | 3 cut(s) | 67, 1175, 1678 |
| SmoI | CTYRAG | 3 cut(s) | 67, 1175, 1678 |
| SphI | GCATGC | 1 cut(s) | 1196 |
| SsiI | CCGC | 2 cut(s) | 254, 1271 |
| SspI | AATATT | 2 cut(s) | 333, 640 |
| SspMI | CTAG | 2 cut(s) | 1274, 1403 |
| StyD4I | CCNGG | 2 cut(s) | 141, 1630 |
| StyI | CCWWGG | 1 cut(s) | 1740 |
| TaaI | ACNGT | 4 cut(s) | 198, 1522, 1549, 1658 |
| TaiI | ACGT | 3 cut(s) | 63, 442, 1117 |
| TfiI | GAWTC | 5 cut(s) | 257, 696, 701, 1406, 1515 |
| Tru1I | TTAA | 5 cut(s) | 125, 516, 618, 1200, 1305 |
| Tru9I | TTAA | 5 cut(s) | 125, 516, 618, 1200, 1305 |
| TscAI | CASTG | 1 cut(s) | 1525 |
| TseFI | GTSAC | 2 cut(s) | 1471, 1625 |
| TseI | GCWGC | 3 cut(s) | 119, 491, 803 |
| Tsp45I | GTSAC | 2 cut(s) | 1471, 1625 |
| TspDTI | ATGAA | 6 cut(s) | 604, 818, 1125, 1172, 1176, 1438 |
| TspGWI | ACGGA | 3 cut(s) | 387, 404, 1517 |
| TspRI | CASTG | 1 cut(s) | 1525 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1469 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 48 |
| XapI | RAATTY | 7 cut(s) | 496, 568, 768, 825, 842, 1496, 1723 |
| XceI | RCATGY | 5 cut(s) | 323, 359, 677, 1143, 1196 |
| XmiI | GTMKAC | 1 cut(s) | 1117 |
| XmnI | GAANNNNTTC | 3 cut(s) | 198, 390, 700 |
| XspI | CTAG | 2 cut(s) | 1274, 1403 |
| Zsp2I | ATGCAT | 1 cut(s) | 1575 |