TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1049 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2245 |
| Acc36I | ACCTGC | 1 cut(s) | 1914 |
| AccBSI | CCGCTC | 1 cut(s) | 426 |
| AccI | GTMKAC | 4 cut(s) | 978, 2249, 2378, 2931 |
| AccII | CGCG | 4 cut(s) | 145, 1557, 1593, 2790 |
| AciI | CCGC | 6 cut(s) | 256, 308, 426, 1591, 2698, 2788 |
| AclI | AACGTT | 1 cut(s) | 1501 |
| AclWI | GGATC | 8 cut(s) | 395, 540, 743, 926, 1672, 1960, 2490, 2634 |
| AcsI | RAATTY | 8 cut(s) | 717, 773, 1283, 1674, 1847, 2130, 2907, 3007 |
| AcuI | CTGAAG | 5 cut(s) | 112, 390, 528, 2323, 2397 |
| AdeI | CACNNNGTG | 1 cut(s) | 3057 |
| AfaI | GTAC | 4 cut(s) | 833, 900, 2740, 3108 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1478, 2584 |
| AflII | CTTAAG | 2 cut(s) | 221, 2425 |
| AflIII | ACRYGT | 1 cut(s) | 1695 |
| AhlI | ACTAGT | 1 cut(s) | 373 |
| AjnI | CCWGG | 2 cut(s) | 171, 1600 |
| Alw21I | GWGCWC | 2 cut(s) | 1794, 2804 |
| Alw26I | GTCTC | 2 cut(s) | 456, 1753 |
| Alw44I | GTGCAC | 1 cut(s) | 2800 |
| AlwI | GGATC | 8 cut(s) | 395, 540, 743, 926, 1672, 1960, 2490, 2634 |
| AoxI | GGCC | 6 cut(s) | 160, 174, 1012, 2557, 3115, 3180 |
| ApaLI | GTGCAC | 1 cut(s) | 2800 |
| ApeKI | GCWGC | 6 cut(s) | 497, 512, 2124, 2457, 2700, 2857 |
| ApoI | RAATTY | 8 cut(s) | 717, 773, 1283, 1674, 1847, 2130, 2907, 3007 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 861, 2142 |
| AspLEI | GCGC | 3 cut(s) | 147, 1626, 2792 |
| AspS9I | GGNCC | 5 cut(s) | 160, 270, 1489, 1948, 2782 |
| AsuHPI | GGTGA | 4 cut(s) | 146, 1995, 2066, 3141 |
| AsuII | TTCGAA | 1 cut(s) | 3085 |
| AvaII | GGWCC | 4 cut(s) | 270, 1489, 1948, 2782 |
| AxyI | CCTNAGG | 2 cut(s) | 2478, 2852 |
| BaeGI | GKGCMC | 1 cut(s) | 2804 |
| BanII | GRGCYC | 1 cut(s) | 1794 |
| BauI | CACGAG | 1 cut(s) | 1056 |
| BbsI | GAAGAC | 5 cut(s) | 144, 2035, 2274, 2325, 2580 |
| Bbv12I | GWGCWC | 2 cut(s) | 1794, 2804 |
| BbvCI | CCTCAGC | 2 cut(s) | 438, 1323 |
| BbvI | GCAGC | 6 cut(s) | 484, 499, 2111, 2444, 2712, 2844 |
| BccI | CCATC | 6 cut(s) | 171, 545, 1108, 1355, 1423, 1824 |
| BceAI | ACGGC | 1 cut(s) | 999 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2786, 2820 |
| BciT130I | CCWGG | 2 cut(s) | 173, 1602 |
| BclI | TGATCA | 1 cut(s) | 448 |
| BcoDI | GTCTC | 2 cut(s) | 456, 1753 |
| BcuI | ACTAGT | 1 cut(s) | 373 |
| BfaI | CTAG | 8 cut(s) | 335, 374, 1238, 1253, 1883, 2663, 2723, 3119 |
| BfmI | CTRYAG | 2 cut(s) | 2172, 2912 |
| BfoI | RGCGCY | 1 cut(s) | 1627 |
| BfrI | CTTAAG | 2 cut(s) | 221, 2425 |
| BfuAI | ACCTGC | 1 cut(s) | 1914 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2556 |
| BglII | AGATCT | 2 cut(s) | 276, 2659 |
| BisI | GCNGC | 7 cut(s) | 498, 513, 1591, 2125, 2458, 2701, 2858 |
| BlsI | GCNGC | 7 cut(s) | 499, 514, 1592, 2126, 2459, 2702, 2859 |
| Bme1390I | CCNGG | 2 cut(s) | 173, 1602 |
| Bme18I | GGWCC | 4 cut(s) | 270, 1489, 1948, 2782 |
| BmgT120I | GGNCC | 5 cut(s) | 160, 270, 1489, 1948, 2782 |
| BmiI | GGNNCC | 4 cut(s) | 271, 1835, 1949, 2978 |
| BmrFI | CCNGG | 2 cut(s) | 173, 1602 |
| BmrI | ACTGGG | 1 cut(s) | 374 |
| BmsI | GCATC | 4 cut(s) | 86, 1530, 1624, 2886 |
| BmuI | ACTGGG | 1 cut(s) | 374 |
| BpiI | GAAGAC | 5 cut(s) | 144, 2035, 2274, 2325, 2580 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 484, 516, 1776, 1808 |
| BpmI | CTGGAG | 2 cut(s) | 1818, 2051 |
| Bpu10I | CCTNAGC | 2 cut(s) | 438, 1323 |
| Bpu14I | TTCGAA | 1 cut(s) | 3085 |
| BpuEI | CTTGAG | 6 cut(s) | 142, 347, 1186, 1331, 2138, 3145 |
| BsaBI | GATNNNNATC | 2 cut(s) | 399, 2595 |
| BsaJI | CCNNGG | 4 cut(s) | 265, 1600, 2147, 2981 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 74, 104, 1878, 1908 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1478, 2584 |
| Bse1I | ACTGG | 7 cut(s) | 255, 315, 369, 383, 1801, 1844, 2077 |
| Bse21I | CCTNAGG | 2 cut(s) | 2478, 2852 |
| Bse3DI | GCAATG | 1 cut(s) | 100 |
| Bse8I | GATNNNNATC | 2 cut(s) | 399, 2595 |
| BseBI | CCWGG | 2 cut(s) | 173, 1602 |
| BseDI | CCNNGG | 4 cut(s) | 265, 1600, 2147, 2981 |
| BseGI | GGATG | 6 cut(s) | 86, 582, 950, 1123, 2224, 2836 |
| BseJI | GATNNNNATC | 2 cut(s) | 399, 2595 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1478, 2584 |
| BseMI | GCAATG | 1 cut(s) | 100 |
| BseMII | CTCAG | 9 cut(s) | 234, 429, 1337, 1754, 1936, 1990, 2566, 2843, 2961 |
| BseNI | ACTGG | 7 cut(s) | 255, 315, 369, 383, 1801, 1844, 2077 |
| BseRI | GAGGAG | 3 cut(s) | 82, 344, 2048 |
| BseSI | GKGCMC | 1 cut(s) | 2804 |
| BseXI | GCAGC | 6 cut(s) | 484, 499, 2111, 2444, 2712, 2844 |
| BseYI | CCCAGC | 4 cut(s) | 528, 2565, 3219, 3232 |
| BsgI | GTGCAG | 1 cut(s) | 373 |
| Bsh1236I | CGCG | 4 cut(s) | 145, 1557, 1593, 2790 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1783 |
| BshFI | GGCC | 6 cut(s) | 162, 176, 1014, 2559, 3117, 3182 |
| BsiEI | CGRYCG | 1 cut(s) | 1783 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1794, 2804 |
| BslFI | GGGAC | 6 cut(s) | 1158, 1400, 1667, 2246, 3179, 3236 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1478, 2584 |
| BsmAI | GTCTC | 2 cut(s) | 456, 1753 |
| BsmFI | GGGAC | 6 cut(s) | 1158, 1400, 1667, 2246, 3179, 3236 |
| BsnI | GGCC | 6 cut(s) | 162, 176, 1014, 2559, 3117, 3182 |
| Bsp119I | TTCGAA | 1 cut(s) | 3085 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1794, 2804 |
| Bsp1407I | TGTACA | 1 cut(s) | 2738 |
| Bsp68I | TCGCGA | 1 cut(s) | 1557 |
| BspACI | CCGC | 6 cut(s) | 256, 308, 426, 1591, 2698, 2788 |
| BspANI | GGCC | 6 cut(s) | 162, 176, 1014, 2559, 3117, 3182 |
| BspCNI | CTCAG | 9 cut(s) | 235, 430, 1336, 1755, 1935, 1989, 2565, 2844, 2962 |
| BspFNI | CGCG | 4 cut(s) | 145, 1557, 1593, 2790 |
| BspHI | TCATGA | 1 cut(s) | 3096 |
| BspLI | GGNNCC | 4 cut(s) | 271, 1835, 1949, 2978 |
| BspMI | ACCTGC | 1 cut(s) | 1914 |
| BspPI | GGATC | 8 cut(s) | 395, 540, 743, 926, 1672, 1960, 2490, 2634 |
| BspQI | GCTCTTC | 1 cut(s) | 2133 |
| BspT104I | TTCGAA | 1 cut(s) | 3085 |
| BspTI | CTTAAG | 2 cut(s) | 221, 2425 |
| BsrBI | CCGCTC | 1 cut(s) | 426 |
| BsrDI | GCAATG | 1 cut(s) | 100 |
| BsrGI | TGTACA | 1 cut(s) | 2738 |
| BsrI | ACTGG | 7 cut(s) | 255, 315, 369, 383, 1801, 1844, 2077 |
| BssECI | CCNNGG | 4 cut(s) | 265, 1600, 2147, 2981 |
| BssSI | CACGAG | 1 cut(s) | 1056 |
| BssT1I | CCWWGG | 2 cut(s) | 265, 2147 |
| Bst2BI | CACGAG | 1 cut(s) | 1056 |
| Bst2UI | CCWGG | 2 cut(s) | 173, 1602 |
| Bst4CI | ACNGT | 3 cut(s) | 751, 2280, 2675 |
| Bst6I | CTCTTC | 3 cut(s) | 1751, 2133, 2325 |
| BstAFI | CTTAAG | 2 cut(s) | 221, 2425 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1549, 2542 |
| BstAUI | TGTACA | 1 cut(s) | 2738 |
| BstBI | TTCGAA | 1 cut(s) | 3085 |
| BstC8I | GCNNGC | 4 cut(s) | 258, 1152, 2259, 2543 |
| BstDSI | CCRYGG | 1 cut(s) | 2981 |
| BstF5I | GGATG | 6 cut(s) | 86, 582, 950, 1123, 2224, 2836 |
| BstFNI | CGCG | 4 cut(s) | 145, 1557, 1593, 2790 |
| BstH2I | RGCGCY | 1 cut(s) | 1627 |
| BstHHI | GCGC | 3 cut(s) | 147, 1626, 2792 |
| BstMAI | GTCTC | 2 cut(s) | 456, 1753 |
| BstMCI | CGRYCG | 1 cut(s) | 1783 |
| BstNI | CCWGG | 2 cut(s) | 173, 1602 |
| BstNSI | RCATGY | 2 cut(s) | 1154, 1699 |
| BstSCI | CCNGG | 2 cut(s) | 171, 1600 |
| BstSFI | CTRYAG | 2 cut(s) | 2172, 2912 |
| BstSLI | GKGCMC | 1 cut(s) | 2804 |
| BstUI | CGCG | 4 cut(s) | 145, 1557, 1593, 2790 |
| BstV1I | GCAGC | 6 cut(s) | 484, 499, 2111, 2444, 2712, 2844 |
| BstV2I | GAAGAC | 5 cut(s) | 144, 2035, 2274, 2325, 2580 |
| BstX2I | RGATCY | 7 cut(s) | 276, 532, 1664, 1965, 2482, 2626, 2659 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2084 |
| BstYI | RGATCY | 7 cut(s) | 276, 532, 1664, 1965, 2482, 2626, 2659 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2478, 2852 |
| BsuRI | GGCC | 6 cut(s) | 162, 176, 1014, 2559, 3117, 3182 |
| BtgI | CCRYGG | 1 cut(s) | 2981 |
| BtsCI | GGATG | 6 cut(s) | 86, 582, 950, 1123, 2224, 2836 |
| BtsI | GCAGTG | 3 cut(s) | 2073, 2802, 2886 |
| BtsIMutI | CAGTG | 8 cut(s) | 362, 1092, 1794, 1837, 1984, 2073, 2802, 2886 |
| BtuMI | TCGCGA | 1 cut(s) | 1557 |
| BveI | ACCTGC | 1 cut(s) | 1914 |
| Cac8I | GCNNGC | 4 cut(s) | 258, 1152, 2259, 2543 |
| CciI | TCATGA | 1 cut(s) | 3096 |
| CfoI | GCGC | 3 cut(s) | 147, 1626, 2792 |
| Cfr13I | GGNCC | 5 cut(s) | 160, 270, 1489, 1948, 2782 |
| CseI | GACGC | 1 cut(s) | 2532 |
| Csp6I | GTAC | 4 cut(s) | 832, 899, 2739, 3107 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2977, 3012 |
| CviQI | GTAC | 4 cut(s) | 832, 899, 2739, 3107 |
| DraI | TTTAAA | 2 cut(s) | 1159, 3072 |
| DraIII | CACNNNGTG | 1 cut(s) | 3057 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2245 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2245 |
| Eam1104I | CTCTTC | 3 cut(s) | 1751, 2133, 2325 |
| EarI | CTCTTC | 3 cut(s) | 1751, 2133, 2325 |
| Ecl136II | GAGCTC | 1 cut(s) | 1792 |
| Eco130I | CCWWGG | 2 cut(s) | 265, 2147 |
| Eco147I | AGGCCT | 1 cut(s) | 2559 |
| Eco24I | GRGCYC | 1 cut(s) | 1794 |
| Eco32I | GATATC | 1 cut(s) | 874 |
| Eco47I | GGWCC | 4 cut(s) | 270, 1489, 1948, 2782 |
| Eco53kI | GAGCTC | 1 cut(s) | 1792 |
| Eco57I | CTGAAG | 5 cut(s) | 112, 390, 528, 2323, 2397 |
| Eco81I | CCTNAGG | 2 cut(s) | 2478, 2852 |
| EcoICRI | GAGCTC | 1 cut(s) | 1792 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1489, 1948 |
| EcoRI | GAATTC | 1 cut(s) | 1847 |
| EcoRII | CCWGG | 2 cut(s) | 171, 1600 |
| EcoRV | GATATC | 1 cut(s) | 874 |
| EcoT14I | CCWWGG | 2 cut(s) | 265, 2147 |
| EcoT22I | ATGCAT | 1 cut(s) | 1545 |
| EcoT38I | GRGCYC | 1 cut(s) | 1794 |
| ErhI | CCWWGG | 2 cut(s) | 265, 2147 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 846, 878, 1176, 1208, 2089, 2121, 2482, 2514 |
| FaqI | GGGAC | 6 cut(s) | 1158, 1400, 1667, 2246, 3179, 3236 |
| FauI | CCCGC | 1 cut(s) | 249 |
| FbaI | TGATCA | 1 cut(s) | 448 |
| FblI | GTMKAC | 4 cut(s) | 978, 2249, 2378, 2931 |
| Fnu4HI | GCNGC | 7 cut(s) | 498, 513, 1591, 2125, 2458, 2701, 2858 |
| FokI | GGATG | 6 cut(s) | 73, 589, 957, 1130, 2231, 2843 |
| FriOI | GRGCYC | 1 cut(s) | 1794 |
| Fsp4HI | GCNGC | 7 cut(s) | 498, 513, 1591, 2125, 2458, 2701, 2858 |
| FspBI | CTAG | 8 cut(s) | 335, 374, 1238, 1253, 1883, 2663, 2723, 3119 |
| GlaI | GCGC | 3 cut(s) | 146, 1625, 2791 |
| GluI | GCNGC | 7 cut(s) | 498, 513, 1591, 2125, 2458, 2701, 2858 |
| GsaI | CCCAGC | 4 cut(s) | 532, 2569, 3223, 3236 |
| GsuI | CTGGAG | 2 cut(s) | 1818, 2051 |
| HaeII | RGCGCY | 1 cut(s) | 1627 |
| HaeIII | GGCC | 6 cut(s) | 162, 176, 1014, 2559, 3117, 3182 |
| HgaI | GACGC | 1 cut(s) | 2532 |
| HhaI | GCGC | 3 cut(s) | 147, 1626, 2792 |
| Hin6I | GCGC | 3 cut(s) | 145, 1624, 2790 |
| HinP1I | GCGC | 3 cut(s) | 145, 1624, 2790 |
| HincII | GTYRAC | 3 cut(s) | 910, 979, 2379 |
| HindII | GTYRAC | 3 cut(s) | 910, 979, 2379 |
| HindIII | AAGCTT | 2 cut(s) | 784, 792 |
| HphI | GGTGA | 4 cut(s) | 146, 1995, 2066, 3141 |
| Hpy166II | GTNNAC | 9 cut(s) | 340, 910, 979, 2074, 2250, 2379, 2739, 2802, 2932 |
| Hpy8I | GTNNAC | 9 cut(s) | 340, 910, 979, 2074, 2250, 2379, 2739, 2802, 2932 |
| Hpy99I | CGWCG | 2 cut(s) | 212, 2609 |
| HpyCH4III | ACNGT | 3 cut(s) | 751, 2280, 2675 |
| HpyCH4IV | ACGT | 6 cut(s) | 702, 901, 1501, 1929, 2326, 3109 |
| HpySE526I | ACGT | 6 cut(s) | 702, 901, 1501, 1929, 2326, 3109 |
| HspAI | GCGC | 3 cut(s) | 145, 1624, 2790 |
| Ksp22I | TGATCA | 1 cut(s) | 448 |
| LguI | GCTCTTC | 1 cut(s) | 2133 |
| LmnI | GCTCC | 5 cut(s) | 331, 988, 1701, 1839, 2852 |
| Lsp1109I | GCAGC | 6 cut(s) | 484, 499, 2111, 2444, 2712, 2844 |
| LweI | GCATC | 4 cut(s) | 86, 1530, 1624, 2886 |
| MaeI | CTAG | 8 cut(s) | 335, 374, 1238, 1253, 1883, 2663, 2723, 3119 |
| MaeII | ACGT | 6 cut(s) | 702, 901, 1501, 1929, 2326, 3109 |
| MaeIII | GTNAC | 5 cut(s) | 1016, 1460, 2176, 2528, 2960 |
| MbiI | CCGCTC | 1 cut(s) | 426 |
| MfeI | CAATTG | 1 cut(s) | 1572 |
| MflI | RGATCY | 7 cut(s) | 276, 532, 1664, 1965, 2482, 2626, 2659 |
| MhlI | GDGCHC | 2 cut(s) | 1794, 2804 |
| MlyI | GAGTC | 7 cut(s) | 77, 644, 1013, 1050, 1677, 1794, 2644 |
| MmeI | TCCRAC | 5 cut(s) | 622, 667, 694, 2036, 2196 |
| Mph1103I | ATGCAT | 1 cut(s) | 1545 |
| MroXI | GAANNNNTTC | 2 cut(s) | 861, 2142 |
| MslI | CAYNNNNRTG | 1 cut(s) | 681 |
| MspCI | CTTAAG | 2 cut(s) | 221, 2425 |
| MspR9I | CCNGG | 2 cut(s) | 173, 1602 |
| MunI | CAATTG | 1 cut(s) | 1572 |
| MvaI | CCWGG | 2 cut(s) | 173, 1602 |
| MvnI | CGCG | 4 cut(s) | 145, 1557, 1593, 2790 |
| NlaIV | GGNNCC | 4 cut(s) | 271, 1835, 1949, 2978 |
| NmuCI | GTSAC | 3 cut(s) | 1016, 1460, 2960 |
| NruI | TCGCGA | 1 cut(s) | 1557 |
| NsiI | ATGCAT | 1 cut(s) | 1545 |
| NspI | RCATGY | 2 cut(s) | 1154, 1699 |
| NspV | TTCGAA | 1 cut(s) | 3085 |
| PaeI | GCATGC | 1 cut(s) | 1154 |
| PagI | TCATGA | 1 cut(s) | 3096 |
| PceI | AGGCCT | 1 cut(s) | 2559 |
| PciI | ACATGT | 1 cut(s) | 1695 |
| PciSI | GCTCTTC | 1 cut(s) | 2133 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 213, 1785 |
| PdmI | GAANNNNTTC | 2 cut(s) | 861, 2142 |
| PflFI | GACNNNGTC | 1 cut(s) | 1436 |
| PkrI | GCNGC | 7 cut(s) | 499, 514, 1592, 2126, 2459, 2702, 2859 |
| PleI | GAGTC | 7 cut(s) | 77, 644, 1013, 1049, 1677, 1793, 2643 |
| PpsI | GAGTC | 7 cut(s) | 77, 644, 1013, 1049, 1677, 1793, 2643 |
| PpuMI | RGGWCCY | 2 cut(s) | 1489, 1948 |
| PscI | ACATGT | 1 cut(s) | 1695 |
| PsiI | TTATAA | 1 cut(s) | 1049 |
| Psp124BI | GAGCTC | 1 cut(s) | 1794 |
| Psp1406I | AACGTT | 1 cut(s) | 1501 |
| Psp5II | RGGWCCY | 2 cut(s) | 1489, 1948 |
| Psp6I | CCWGG | 2 cut(s) | 171, 1600 |
| PspFI | CCCAGC | 4 cut(s) | 528, 2565, 3219, 3232 |
| PspGI | CCWGG | 2 cut(s) | 171, 1600 |
| PspN4I | GGNNCC | 4 cut(s) | 271, 1835, 1949, 2978 |
| PspPI | GGNCC | 5 cut(s) | 160, 270, 1489, 1948, 2782 |
| PspPPI | RGGWCCY | 2 cut(s) | 1489, 1948 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2169, 2201 |
| PsuI | RGATCY | 7 cut(s) | 276, 532, 1664, 1965, 2482, 2626, 2659 |
| PsyI | GACNNNGTC | 1 cut(s) | 1436 |
| RruI | TCGCGA | 1 cut(s) | 1557 |
| RsaI | GTAC | 4 cut(s) | 833, 900, 2740, 3108 |
| RsaNI | GTAC | 4 cut(s) | 832, 899, 2739, 3107 |
| RseI | CAYNNNNRTG | 1 cut(s) | 681 |
| SacI | GAGCTC | 1 cut(s) | 1794 |
| SalI | GTCGAC | 2 cut(s) | 977, 2377 |
| SapI | GCTCTTC | 1 cut(s) | 2133 |
| SatI | GCNGC | 7 cut(s) | 498, 513, 1591, 2125, 2458, 2701, 2858 |
| Sau96I | GGNCC | 5 cut(s) | 160, 270, 1489, 1948, 2782 |
| SchI | GAGTC | 7 cut(s) | 77, 644, 1013, 1050, 1677, 1794, 2644 |
| ScrFI | CCNGG | 2 cut(s) | 173, 1602 |
| SduI | GDGCHC | 2 cut(s) | 1794, 2804 |
| SfaNI | GCATC | 4 cut(s) | 86, 1530, 1624, 2886 |
| SfcI | CTRYAG | 2 cut(s) | 2172, 2912 |
| SfuI | TTCGAA | 1 cut(s) | 3085 |
| SinI | GGWCC | 4 cut(s) | 270, 1489, 1948, 2782 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 681 |
| SmlI | CTYRAG | 8 cut(s) | 121, 221, 326, 1201, 1346, 2117, 2425, 3124 |
| SmoI | CTYRAG | 8 cut(s) | 121, 221, 326, 1201, 1346, 2117, 2425, 3124 |
| SpeI | ACTAGT | 1 cut(s) | 373 |
| SphI | GCATGC | 1 cut(s) | 1154 |
| SseBI | AGGCCT | 1 cut(s) | 2559 |
| SsiI | CCGC | 6 cut(s) | 256, 308, 426, 1591, 2698, 2788 |
| SspI | AATATT | 1 cut(s) | 1449 |
| SspMI | CTAG | 8 cut(s) | 335, 374, 1238, 1253, 1883, 2663, 2723, 3119 |
| SstI | GAGCTC | 1 cut(s) | 1794 |
| StuI | AGGCCT | 1 cut(s) | 2559 |
| StyD4I | CCNGG | 2 cut(s) | 171, 1600 |
| StyI | CCWWGG | 2 cut(s) | 265, 2147 |
| TaaI | ACNGT | 3 cut(s) | 751, 2280, 2675 |
| TaiI | ACGT | 6 cut(s) | 705, 904, 1504, 1932, 2329, 3112 |
| TaqI | TCGA | 9 cut(s) | 207, 978, 1773, 1783, 1788, 2363, 2378, 2718, 3085 |
| TaqII | GACCGA | 1 cut(s) | 1769 |
| TatI | WGTACW | 2 cut(s) | 831, 2738 |
| TauI | GCSGC | 1 cut(s) | 1593 |
| TscAI | CASTG | 8 cut(s) | 369, 1092, 1801, 1844, 1984, 2073, 2809, 2893 |
| TseFI | GTSAC | 3 cut(s) | 1016, 1460, 2960 |
| TseI | GCWGC | 6 cut(s) | 497, 512, 2124, 2457, 2700, 2857 |
| Tsp45I | GTSAC | 3 cut(s) | 1016, 1460, 2960 |
| TspGWI | ACGGA | 2 cut(s) | 1568, 2795 |
| TspRI | CASTG | 8 cut(s) | 369, 1092, 1801, 1844, 1984, 2073, 2809, 2893 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1436 |
| Vha464I | CTTAAG | 2 cut(s) | 221, 2425 |
| VneI | GTGCAC | 1 cut(s) | 2800 |
| VpaK11BI | GGWCC | 4 cut(s) | 270, 1489, 1948, 2782 |
| XapI | RAATTY | 8 cut(s) | 717, 773, 1283, 1674, 1847, 2130, 2907, 3007 |
| XbaI | TCTAGA | 1 cut(s) | 2662 |
| XceI | RCATGY | 2 cut(s) | 1154, 1699 |
| XmiI | GTMKAC | 4 cut(s) | 978, 2249, 2378, 2931 |
| XmnI | GAANNNNTTC | 2 cut(s) | 861, 2142 |
| XspI | CTAG | 8 cut(s) | 335, 374, 1238, 1253, 1883, 2663, 2723, 3119 |
| Zsp2I | ATGCAT | 1 cut(s) | 1545 |