TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 158 |
| AciI | CCGC | 1 cut(s) | 411 |
| AcsI | RAATTY | 3 cut(s) | 69, 85, 554 |
| AcuI | CTGAAG | 1 cut(s) | 152 |
| AfaI | GTAC | 1 cut(s) | 180 |
| AgsI | TTSAA | 7 cut(s) | 61, 176, 319, 341, 400, 425, 443 |
| AjiI | CACGTC | 1 cut(s) | 144 |
| AjnI | CCWGG | 2 cut(s) | 97, 350 |
| AluBI | AGCT | 2 cut(s) | 9, 312 |
| AluI | AGCT | 2 cut(s) | 9, 312 |
| AoxI | GGCC | 1 cut(s) | 147 |
| ApeKI | GCWGC | 1 cut(s) | 19 |
| ApoI | RAATTY | 3 cut(s) | 69, 85, 554 |
| AspLEI | GCGC | 1 cut(s) | 306 |
| AspS9I | GGNCC | 2 cut(s) | 95, 147 |
| AsuHPI | GGTGA | 1 cut(s) | 425 |
| AvaII | GGWCC | 1 cut(s) | 95 |
| AxyI | CCTNAGG | 1 cut(s) | 274 |
| BanI | GGYRCC | 1 cut(s) | 158 |
| BbvI | GCAGC | 1 cut(s) | 6 |
| BccI | CCATC | 2 cut(s) | 75, 149 |
| BciT130I | CCWGG | 2 cut(s) | 99, 352 |
| BciVI | GTATCC | 1 cut(s) | 484 |
| BfaI | CTAG | 2 cut(s) | 309, 374 |
| BfmI | CTRYAG | 1 cut(s) | 74 |
| BfuI | GTATCC | 1 cut(s) | 484 |
| BisI | GCNGC | 1 cut(s) | 20 |
| BlsI | GCNGC | 1 cut(s) | 21 |
| Bme1390I | CCNGG | 2 cut(s) | 99, 352 |
| Bme18I | GGWCC | 1 cut(s) | 95 |
| BmgBI | CACGTC | 1 cut(s) | 144 |
| BmgT120I | GGNCC | 2 cut(s) | 95, 147 |
| BmiI | GGNNCC | 1 cut(s) | 160 |
| BmrFI | CCNGG | 2 cut(s) | 99, 352 |
| BmsI | GCATC | 1 cut(s) | 48 |
| BsaJI | CCNNGG | 1 cut(s) | 116 |
| Bse21I | CCTNAGG | 1 cut(s) | 274 |
| BseBI | CCWGG | 2 cut(s) | 99, 352 |
| BseDI | CCNNGG | 1 cut(s) | 116 |
| BseGI | GGATG | 1 cut(s) | 86 |
| BseXI | GCAGC | 1 cut(s) | 6 |
| BshFI | GGCC | 1 cut(s) | 149 |
| BshNI | GGYRCC | 1 cut(s) | 158 |
| BsnI | GGCC | 1 cut(s) | 149 |
| Bsp143I | GATC | 1 cut(s) | 247 |
| BspACI | CCGC | 1 cut(s) | 411 |
| BspANI | GGCC | 1 cut(s) | 149 |
| BspLI | GGNNCC | 1 cut(s) | 160 |
| BspT107I | GGYRCC | 1 cut(s) | 158 |
| BssECI | CCNNGG | 1 cut(s) | 116 |
| BssMI | GATC | 1 cut(s) | 247 |
| BssT1I | CCWWGG | 1 cut(s) | 116 |
| Bst2UI | CCWGG | 2 cut(s) | 99, 352 |
| Bst4CI | ACNGT | 4 cut(s) | 166, 197, 217, 242 |
| Bst6I | CTCTTC | 1 cut(s) | 234 |
| BstDEI | CTNAG | 1 cut(s) | 274 |
| BstF5I | GGATG | 1 cut(s) | 86 |
| BstHHI | GCGC | 1 cut(s) | 306 |
| BstKTI | GATC | 1 cut(s) | 250 |
| BstMBI | GATC | 1 cut(s) | 247 |
| BstNI | CCWGG | 2 cut(s) | 99, 352 |
| BstNSI | RCATGY | 1 cut(s) | 564 |
| BstSCI | CCNGG | 2 cut(s) | 97, 350 |
| BstSFI | CTRYAG | 1 cut(s) | 74 |
| BstV1I | GCAGC | 1 cut(s) | 6 |
| Bsu36I | CCTNAGG | 1 cut(s) | 274 |
| BsuI | GTATCC | 1 cut(s) | 484 |
| BsuRI | GGCC | 1 cut(s) | 149 |
| BtrI | CACGTC | 1 cut(s) | 144 |
| BtsCI | GGATG | 1 cut(s) | 86 |
| BtsI | GCAGTG | 1 cut(s) | 48 |
| BtsIMutI | CAGTG | 1 cut(s) | 48 |
| CfoI | GCGC | 1 cut(s) | 306 |
| Cfr13I | GGNCC | 2 cut(s) | 95, 147 |
| CsiI | ACCWGGT | 1 cut(s) | 97 |
| Csp6I | GTAC | 1 cut(s) | 179 |
| CviAII | CATG | 2 cut(s) | 13, 561 |
| CviJI | RGCY | 7 cut(s) | 9, 19, 149, 280, 312, 373, 503 |
| CviKI_1 | RGCY | 7 cut(s) | 9, 19, 149, 280, 312, 373, 503 |
| CviQI | GTAC | 1 cut(s) | 179 |
| DdeI | CTNAG | 1 cut(s) | 274 |
| DpnI | GATC | 1 cut(s) | 249 |
| DpnII | GATC | 1 cut(s) | 247 |
| Eam1104I | CTCTTC | 1 cut(s) | 234 |
| EarI | CTCTTC | 1 cut(s) | 234 |
| Eco130I | CCWWGG | 1 cut(s) | 116 |
| Eco47I | GGWCC | 1 cut(s) | 95 |
| Eco57I | CTGAAG | 1 cut(s) | 152 |
| Eco81I | CCTNAGG | 1 cut(s) | 274 |
| EcoO109I | RGGNCCY | 1 cut(s) | 95 |
| EcoRII | CCWGG | 2 cut(s) | 97, 350 |
| EcoT14I | CCWWGG | 1 cut(s) | 116 |
| ErhI | CCWWGG | 1 cut(s) | 116 |
| FaeI | CATG | 2 cut(s) | 16, 564 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 243, 275 |
| FatI | CATG | 2 cut(s) | 12, 560 |
| Fnu4HI | GCNGC | 1 cut(s) | 20 |
| FokI | GGATG | 1 cut(s) | 93 |
| Fsp4HI | GCNGC | 1 cut(s) | 20 |
| FspBI | CTAG | 2 cut(s) | 309, 374 |
| GlaI | GCGC | 1 cut(s) | 305 |
| GluI | GCNGC | 1 cut(s) | 20 |
| HaeIII | GGCC | 1 cut(s) | 149 |
| HhaI | GCGC | 1 cut(s) | 306 |
| Hin1II | CATG | 2 cut(s) | 16, 564 |
| Hin6I | GCGC | 1 cut(s) | 304 |
| HinP1I | GCGC | 1 cut(s) | 304 |
| HincII | GTYRAC | 2 cut(s) | 141, 213 |
| HindII | GTYRAC | 2 cut(s) | 141, 213 |
| HinfI | GANTC | 1 cut(s) | 344 |
| HphI | GGTGA | 1 cut(s) | 425 |
| Hpy166II | GTNNAC | 2 cut(s) | 141, 213 |
| Hpy188I | TCNGA | 4 cut(s) | 132, 328, 406, 448 |
| Hpy188III | TCNNGA | 2 cut(s) | 233, 266 |
| Hpy8I | GTNNAC | 2 cut(s) | 141, 213 |
| HpyAV | CCTTC | 2 cut(s) | 26, 401 |
| HpyCH4III | ACNGT | 4 cut(s) | 166, 197, 217, 242 |
| HpyCH4IV | ACGT | 1 cut(s) | 143 |
| HpyCH4V | TGCA | 2 cut(s) | 39, 560 |
| HpyF3I | CTNAG | 1 cut(s) | 274 |
| HpySE526I | ACGT | 1 cut(s) | 143 |
| Hsp92II | CATG | 2 cut(s) | 16, 564 |
| HspAI | GCGC | 1 cut(s) | 304 |
| Kzo9I | GATC | 1 cut(s) | 247 |
| LmnI | GCTCC | 1 cut(s) | 14 |
| Lsp1109I | GCAGC | 1 cut(s) | 6 |
| LweI | GCATC | 1 cut(s) | 48 |
| MabI | ACCWGGT | 1 cut(s) | 97 |
| MaeI | CTAG | 2 cut(s) | 309, 374 |
| MaeII | ACGT | 1 cut(s) | 143 |
| MaeIII | GTNAC | 2 cut(s) | 286, 413 |
| MalI | GATC | 1 cut(s) | 249 |
| MboI | GATC | 1 cut(s) | 247 |
| MboII | GAAGA | 5 cut(s) | 221, 307, 339, 353, 542 |
| MluCI | AATT | 7 cut(s) | 69, 85, 169, 186, 331, 400, 554 |
| MnlI | CCTC | 2 cut(s) | 9, 192 |
| MseI | TTAA | 1 cut(s) | 456 |
| MspR9I | CCNGG | 2 cut(s) | 99, 352 |
| MvaI | CCWGG | 2 cut(s) | 99, 352 |
| NdeII | GATC | 1 cut(s) | 247 |
| NlaIII | CATG | 2 cut(s) | 16, 564 |
| NlaIV | GGNNCC | 1 cut(s) | 160 |
| NmuCI | GTSAC | 1 cut(s) | 413 |
| NspI | RCATGY | 1 cut(s) | 564 |
| PfeI | GAWTC | 1 cut(s) | 344 |
| PkrI | GCNGC | 1 cut(s) | 21 |
| PpuMI | RGGWCCY | 1 cut(s) | 95 |
| Psp5II | RGGWCCY | 1 cut(s) | 95 |
| Psp6I | CCWGG | 2 cut(s) | 97, 350 |
| PspGI | CCWGG | 2 cut(s) | 97, 350 |
| PspN4I | GGNNCC | 1 cut(s) | 160 |
| PspPI | GGNCC | 2 cut(s) | 95, 147 |
| PspPPI | RGGWCCY | 1 cut(s) | 95 |
| RsaI | GTAC | 1 cut(s) | 180 |
| RsaNI | GTAC | 1 cut(s) | 179 |
| SaqAI | TTAA | 1 cut(s) | 456 |
| SatI | GCNGC | 1 cut(s) | 20 |
| Sau3AI | GATC | 1 cut(s) | 247 |
| Sau96I | GGNCC | 2 cut(s) | 95, 147 |
| ScrFI | CCNGG | 2 cut(s) | 99, 352 |
| SetI | ASST | 9 cut(s) | 11, 100, 146, 184, 256, 275, 314, 356, 462 |
| SexAI | ACCWGGT | 1 cut(s) | 97 |
| SfaNI | GCATC | 1 cut(s) | 48 |
| SfcI | CTRYAG | 1 cut(s) | 74 |
| SinI | GGWCC | 1 cut(s) | 95 |
| Sse9I | AATT | 7 cut(s) | 69, 85, 169, 186, 331, 400, 554 |
| SsiI | CCGC | 1 cut(s) | 411 |
| SspMI | CTAG | 2 cut(s) | 309, 374 |
| StyD4I | CCNGG | 2 cut(s) | 97, 350 |
| StyI | CCWWGG | 1 cut(s) | 116 |
| TaaI | ACNGT | 4 cut(s) | 166, 197, 217, 242 |
| TaiI | ACGT | 1 cut(s) | 146 |
| TasI | AATT | 7 cut(s) | 69, 85, 169, 186, 331, 400, 554 |
| TfiI | GAWTC | 1 cut(s) | 344 |
| Tru1I | TTAA | 1 cut(s) | 456 |
| Tru9I | TTAA | 1 cut(s) | 456 |
| TscAI | CASTG | 1 cut(s) | 55 |
| TseFI | GTSAC | 1 cut(s) | 413 |
| TseI | GCWGC | 1 cut(s) | 19 |
| Tsp45I | GTSAC | 1 cut(s) | 413 |
| TspDTI | ATGAA | 2 cut(s) | 17, 79 |
| TspRI | CASTG | 1 cut(s) | 55 |
| VpaK11BI | GGWCC | 1 cut(s) | 95 |
| XapI | RAATTY | 3 cut(s) | 69, 85, 554 |
| XceI | RCATGY | 1 cut(s) | 564 |
| XspI | CTAG | 2 cut(s) | 309, 374 |