Rmu_sc0036828.1_g000002

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0036828.1
OG0000055
Physical Location & Seq
Forward (+)
3136 .. 5276
2141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0036828.1_g000002.1.cds

Sequence Viewer

Length: 1446 bp
atgatgcatgatttgcttcgcgacatgggtagagcaattgtccgtgcaaaatgccctggcaaccctggaaaatggagtagagtgtggcactggaaagatgcagtagaggtattgagggacgaatctggatctgatgaaattcaaggactcactctaggcatgtggagcttaaaattagagaaaaaggctgaatttaggacaaaagcatttgcaaaaatgaagagactgagatttctcgaactcagacgtgtaaagctcaccggaggctacaaatatctccccaacaagttaagatggctccactggactggattccctctagagttcataccaaaagactttagtctaggagacgctgttggtatctgcctgccacataacaggctcagatacgtttgggaagattctggggtctttgcgaaattgaagattcttgatctcagttattccaatttcttaaaacaatcaccagacttttcaactattccaaatctcgaggagttagtcctcaaaggctgttgcgaattgagagtggttcaccagtccattggaggactgaaaaggctttctttggttaatcttacggactgcgtcattcttgaggagcttccaaggagtttctataagttaaaatctatagtaactcttgttcttgatggctgtaaaagatttgagaaattggatcaggaaataggggacatgacatcgttgtctactctgcgtgtaaacgaagcagccataacagaactgccatcttccattgtgcgattaaagaacctgagatgtttgtctctgctacgttgcattattccagctaaagtatacgaacggtttttcttggacttttccaggacgagacgtaatttccctaattttagtttgcctccttccgttcaaggcttaagctctttagctgatctatctatcgattacagcaatataactgttccccaggatcttggaagtctatcttccctggaacgtttatatatatgcaacagtaatttgcaaagcctgccaagcctcagaggcctctcccagcttgtagacctatgcttgggtgattgcaatcttaccgatgaaatgatagaggtaatggatcttgggagtctttcctctttgaaatcgttagatctacgtcaaaacagtttcagtagccttccaagcctccgcagcctttctaagcttgtcactctagaattgagaagttgcagaaaccttgttgcaatcccagatttaccaacaagtttgactgtcctctgcgcctacaactgcactgcattggaaataatgcccgacttttcggatatgtccaatatgagacagttgtatctatcccgatgtcgcaaactcgttgaggttccaggcttggatgaatctttgaaaagttccatgagagagcttagggtgccccacgctcaatttggatggaatcgacttcgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

481

Amino Acids

54.79

Weight (kDa)

9.06

Isoelectric Point (pI)

50.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 709
AccB1I GGYRCC 1 cut(s) 1408
AccI GTMKAC 3 cut(s) 713, 822, 1047
AccII CGCG 1 cut(s) 21
AciI CCGC 1 cut(s) 1171
AclI AACGTT 1 cut(s) 982
AclWI GGATC 4 cut(s) 136, 690, 963, 1107
AcsI RAATTY 2 cut(s) 138, 191
AfiI CCNNNNNNNGG 1 cut(s) 1057
AflII CTTAAG 1 cut(s) 901
AflIII ACRYGT 1 cut(s) 247
AgsI TTSAA 6 cut(s) 143, 427, 480, 896, 1123, 1384
AjiI CACGTC 1 cut(s) 248
AjnI CCWGG 6 cut(s) 55, 64, 848, 951, 975, 1363
AluBI AGCT 9 cut(s) 168, 256, 607, 815, 906, 914, 1042, 1186, 1402
AluI AGCT 9 cut(s) 168, 256, 607, 815, 906, 914, 1042, 1186, 1402
Alw26I GTCTC 5 cut(s) 217, 345, 795, 850, 1315
AlwI GGATC 4 cut(s) 136, 690, 963, 1107
Ama87I CYCGRG 1 cut(s) 494
AoxI GGCC 1 cut(s) 1030
ApeKI GCWGC 2 cut(s) 734, 1173
ApoI RAATTY 2 cut(s) 138, 191
AspLEI GCGC 1 cut(s) 1265
AsuHPI GGTGA 4 cut(s) 250, 459, 530, 1073
AvaI CYCGRG 1 cut(s) 494
BaeGI GKGCMC 1 cut(s) 1413
BaeI ACNNNNGTAYC 2 cut(s) 1313, 1346
BanI GGYRCC 1 cut(s) 1408
BbvI GCAGC 2 cut(s) 746, 1185
BccI CCATC 4 cut(s) 288, 650, 760, 1422
BciT130I CCWGG 6 cut(s) 57, 66, 850, 953, 977, 1365
BcoDI GTCTC 5 cut(s) 217, 345, 795, 850, 1315
BfaI CTAG 4 cut(s) 155, 320, 347, 1196
BfmI CTRYAG 1 cut(s) 636
BfrI CTTAAG 1 cut(s) 901
BglI GCCNNNNNGGC 1 cut(s) 1029
BglII AGATCT 1 cut(s) 1132
BisI GCNGC 2 cut(s) 735, 1174
BlsI GCNGC 2 cut(s) 736, 1175
Bme1390I CCNGG 6 cut(s) 57, 66, 850, 953, 977, 1365
BmeT110I CYCGRG 1 cut(s) 494
BmgBI CACGTC 1 cut(s) 248
BmiI GGNNCC 3 cut(s) 299, 1362, 1410
BmrFI CCNGG 6 cut(s) 57, 66, 850, 953, 977, 1365
BmsI GCATC 1 cut(s) 88
BoxI GACNNNNGTC 1 cut(s) 342
Bpu10I CCTNAGC 1 cut(s) 1403
BpuEI CTTGAG 1 cut(s) 620
Bsa29I ATCGAT 1 cut(s) 927
BsaBI GATNNNNATC 1 cut(s) 1068
BsaJI CCNNGG 5 cut(s) 55, 64, 611, 951, 975
BsaWI WCCGGW 1 cut(s) 260
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bsc4I CCNNNNNNNGG 1 cut(s) 1057
Bse1I ACTGG 4 cut(s) 95, 308, 313, 541
Bse8I GATNNNNATC 1 cut(s) 1068
BseBI CCWGG 6 cut(s) 57, 66, 850, 953, 977, 1365
BseCI ATCGAT 1 cut(s) 927
BseDI CCNNGG 5 cut(s) 55, 64, 611, 951, 975
BseGI GGATG 2 cut(s) 1378, 1433
BseJI GATNNNNATC 1 cut(s) 1068
BseLI CCNNNNNNNGG 1 cut(s) 1057
BseMII CTCAG 6 cut(s) 218, 256, 400, 454, 770, 1039
BseNI ACTGG 4 cut(s) 95, 308, 313, 541
BseRI GAGGAG 2 cut(s) 512, 617
BseSI GKGCMC 1 cut(s) 1413
BseXI GCAGC 2 cut(s) 746, 1185
BseYI CCCAGC 1 cut(s) 1038
BsgI GTGCAG 1 cut(s) 1258
Bsh1236I CGCG 1 cut(s) 21
BshFI GGCC 1 cut(s) 1032
BshNI GGYRCC 1 cut(s) 1408
BshVI ATCGAT 1 cut(s) 927
BsiHKCI CYCGRG 1 cut(s) 494
BsiSI CCGG 1 cut(s) 261
BslFI GGGAC 2 cut(s) 131, 710
BslI CCNNNNNNNGG 1 cut(s) 1057
BsmAI GTCTC 5 cut(s) 217, 345, 795, 850, 1315
BsmBI CGTCTC 2 cut(s) 345, 850
BsmFI GGGAC 2 cut(s) 131, 710
BsnI GGCC 1 cut(s) 1032
BsoBI CYCGRG 1 cut(s) 494
Bsp1286I GDGCHC 1 cut(s) 1413
Bsp143I GATC 7 cut(s) 128, 436, 682, 916, 955, 1099, 1132
Bsp68I TCGCGA 1 cut(s) 21
BspACI CCGC 1 cut(s) 1171
BspANI GGCC 1 cut(s) 1032
BspCNI CTCAG 6 cut(s) 219, 255, 399, 453, 771, 1038
BspDI ATCGAT 1 cut(s) 927
BspFNI CGCG 1 cut(s) 21
BspLI GGNNCC 3 cut(s) 299, 1362, 1410
BspPI GGATC 4 cut(s) 136, 690, 963, 1107
BspT107I GGYRCC 1 cut(s) 1408
BspTI CTTAAG 1 cut(s) 901
BsrI ACTGG 4 cut(s) 95, 308, 313, 541
BssECI CCNNGG 5 cut(s) 55, 64, 611, 951, 975
BssMI GATC 7 cut(s) 128, 436, 682, 916, 955, 1099, 1132
BssNAI GTATAC 1 cut(s) 823
BssT1I CCWWGG 1 cut(s) 611
Bst1107I GTATAC 1 cut(s) 823
Bst2UI CCWGG 6 cut(s) 57, 66, 850, 953, 977, 1365
Bst4CI ACNGT 6 cut(s) 831, 946, 1001, 1148, 1255, 1326
Bst6I CTCTTC 1 cut(s) 215
BstAFI CTTAAG 1 cut(s) 901
BstAPI GCANNNNNTGC 2 cut(s) 13, 1015
BstC8I GCNNGC 2 cut(s) 371, 1016
BstDEI CTNAG 8 cut(s) 227, 242, 386, 440, 779, 1025, 1182, 1403
BstF5I GGATG 2 cut(s) 1378, 1433
BstFNI CGCG 1 cut(s) 21
BstHHI GCGC 1 cut(s) 1265
BstKTI GATC 7 cut(s) 131, 439, 685, 919, 958, 1102, 1135
BstMAI GTCTC 5 cut(s) 217, 345, 795, 850, 1315
BstMBI GATC 7 cut(s) 128, 436, 682, 916, 955, 1099, 1132
BstMWI GCNNNNNNNGC 8 cut(s) 13, 165, 1015, 1020, 1029, 1164, 1173, 1408
BstNI CCWGG 6 cut(s) 57, 66, 850, 953, 977, 1365
BstNSI RCATGY 1 cut(s) 163
BstPAI GACNNNNGTC 1 cut(s) 342
BstSCI CCNGG 6 cut(s) 55, 64, 848, 951, 975, 1363
BstSFI CTRYAG 1 cut(s) 636
BstSLI GKGCMC 1 cut(s) 1413
BstUI CGCG 1 cut(s) 21
BstV1I GCAGC 2 cut(s) 746, 1185
BstX2I RGATCY 4 cut(s) 128, 955, 1099, 1132
BstXI CCANNNNNNTGG 3 cut(s) 308, 548, 959
BstYI RGATCY 4 cut(s) 128, 955, 1099, 1132
BstZ17I GTATAC 1 cut(s) 823
Bsu15I ATCGAT 1 cut(s) 927
BsuRI GGCC 1 cut(s) 1032
BsuTUI ATCGAT 1 cut(s) 927
BtrI CACGTC 1 cut(s) 248
BtsCI GGATG 2 cut(s) 1378, 1433
BtsI GCAGTG 1 cut(s) 1275
BtsIMutI CAGTG 3 cut(s) 88, 301, 1275
BtuMI TCGCGA 1 cut(s) 21
Cac8I GCNNGC 2 cut(s) 371, 1016
CfoI GCGC 1 cut(s) 1265
ClaI ATCGAT 1 cut(s) 927
CseI GACGC 2 cut(s) 362, 580
CviAII CATG 5 cut(s) 8, 25, 160, 700, 1393
DdeI CTNAG 8 cut(s) 227, 242, 386, 440, 779, 1025, 1182, 1403
DpnI GATC 7 cut(s) 130, 438, 684, 918, 957, 1101, 1134
DpnII GATC 7 cut(s) 128, 436, 682, 916, 955, 1099, 1132
DrdI GACNNNNNNGTC 1 cut(s) 709
DseDI GACNNNNNNGTC 1 cut(s) 709
Eam1104I CTCTTC 1 cut(s) 215
EarI CTCTTC 1 cut(s) 215
Eco130I CCWWGG 1 cut(s) 611
Eco147I AGGCCT 1 cut(s) 1032
Eco88I CYCGRG 1 cut(s) 494
EcoRII CCWGG 6 cut(s) 55, 64, 848, 951, 975, 1363
EcoT14I CCWWGG 1 cut(s) 611
EcoT22I ATGCAT 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 611
Esp3I CGTCTC 2 cut(s) 345, 850
FaeI CATG 5 cut(s) 11, 28, 163, 703, 1396
FalI AAGNNNNNCTT 4 cut(s) 553, 585, 955, 987
FaqI GGGAC 2 cut(s) 131, 710
FatI CATG 5 cut(s) 7, 24, 159, 699, 1392
FblI GTMKAC 3 cut(s) 713, 822, 1047
Fnu4HI GCNGC 2 cut(s) 735, 1174
FokI GGATG 2 cut(s) 1385, 1440
Fsp4HI GCNGC 2 cut(s) 735, 1174
FspBI CTAG 4 cut(s) 155, 320, 347, 1196
GlaI GCGC 1 cut(s) 1264
GluI GCNGC 2 cut(s) 735, 1174
GsaI CCCAGC 1 cut(s) 1042
HaeIII GGCC 1 cut(s) 1032
HapII CCGG 1 cut(s) 261
HgaI GACGC 2 cut(s) 362, 580
HhaI GCGC 1 cut(s) 1265
Hin1II CATG 5 cut(s) 11, 28, 163, 703, 1396
Hin6I GCGC 1 cut(s) 1263
HinP1I GCGC 1 cut(s) 1263
HindIII AAGCTT 1 cut(s) 1184
HinfI GANTC 8 cut(s) 122, 147, 312, 404, 430, 1108, 1376, 1432
HpaII CCGG 1 cut(s) 261
HphI GGTGA 4 cut(s) 250, 459, 530, 1073
Hpy166II GTNNAC 5 cut(s) 538, 714, 727, 823, 1048
Hpy188I TCNGA 5 cut(s) 133, 245, 389, 1028, 1306
Hpy8I GTNNAC 5 cut(s) 538, 714, 727, 823, 1048
HpyAV CCTTC 2 cut(s) 897, 1169
HpyCH4III ACNGT 6 cut(s) 831, 946, 1001, 1148, 1255, 1326
HpyCH4IV ACGT 6 cut(s) 247, 393, 799, 859, 982, 1138
HpyF10VI GCNNNNNNNGC 8 cut(s) 13, 165, 1015, 1020, 1029, 1164, 1173, 1408
HpyF3I CTNAG 8 cut(s) 227, 242, 386, 440, 779, 1025, 1182, 1403
HpySE526I ACGT 6 cut(s) 247, 393, 799, 859, 982, 1138
Hsp92II CATG 5 cut(s) 11, 28, 163, 703, 1396
HspAI GCGC 1 cut(s) 1263
Kzo9I GATC 7 cut(s) 128, 436, 682, 916, 955, 1099, 1132
LmnI GCTCC 3 cut(s) 165, 303, 604
Lsp1109I GCAGC 2 cut(s) 746, 1185
LweI GCATC 1 cut(s) 88
MaeI CTAG 4 cut(s) 155, 320, 347, 1196
MaeII ACGT 6 cut(s) 247, 393, 799, 859, 982, 1138
MaeIII GTNAC 2 cut(s) 640, 1189
MalI GATC 7 cut(s) 130, 438, 684, 918, 957, 1101, 1134
MboI GATC 7 cut(s) 128, 436, 682, 916, 955, 1099, 1132
MboII GAAGA 5 cut(s) 232, 413, 439, 747, 963
MfeI CAATTG 1 cut(s) 36
MflI RGATCY 4 cut(s) 128, 955, 1099, 1132
MhlI GDGCHC 1 cut(s) 1413
MlyI GAGTC 2 cut(s) 141, 1117
Mph1103I ATGCAT 1 cut(s) 9
MseI TTAA 7 cut(s) 170, 290, 458, 576, 629, 770, 902
MspCI CTTAAG 1 cut(s) 901
MspI CCGG 1 cut(s) 261
MspR9I CCNGG 6 cut(s) 57, 66, 850, 953, 977, 1365
MunI CAATTG 1 cut(s) 36
MvaI CCWGG 6 cut(s) 57, 66, 850, 953, 977, 1365
MvnI CGCG 1 cut(s) 21
MwoI GCNNNNNNNGC 8 cut(s) 13, 165, 1015, 1020, 1029, 1164, 1173, 1408
NdeII GATC 7 cut(s) 128, 436, 682, 916, 955, 1099, 1132
NlaIII CATG 5 cut(s) 11, 28, 163, 703, 1396
NlaIV GGNNCC 3 cut(s) 299, 1362, 1410
NmuCI GTSAC 1 cut(s) 1189
NruI TCGCGA 1 cut(s) 21
NsiI ATGCAT 1 cut(s) 9
NspI RCATGY 1 cut(s) 163
PaeR7I CTCGAG 1 cut(s) 494
PceI AGGCCT 1 cut(s) 1032
PfeI GAWTC 6 cut(s) 122, 312, 404, 430, 1376, 1432
PflFI GACNNNGTC 1 cut(s) 590
PfoI TCCNGGA 1 cut(s) 848
PkrI GCNGC 2 cut(s) 736, 1175
PleI GAGTC 2 cut(s) 141, 1116
PpsI GAGTC 2 cut(s) 141, 1116
PshAI GACNNNNGTC 1 cut(s) 342
Psp1406I AACGTT 1 cut(s) 982
Psp6I CCWGG 6 cut(s) 55, 64, 848, 951, 975, 1363
PspFI CCCAGC 1 cut(s) 1038
PspGI CCWGG 6 cut(s) 55, 64, 848, 951, 975, 1363
PspN4I GGNNCC 3 cut(s) 299, 1362, 1410
PsrI GAACNNNNNNTAC 2 cut(s) 633, 665
PsuI RGATCY 4 cut(s) 128, 955, 1099, 1132
PsyI GACNNNGTC 1 cut(s) 590
RruI TCGCGA 1 cut(s) 21
SaqAI TTAA 7 cut(s) 170, 290, 458, 576, 629, 770, 902
SatI GCNGC 2 cut(s) 735, 1174
Sau3AI GATC 7 cut(s) 128, 436, 682, 916, 955, 1099, 1132
SchI GAGTC 2 cut(s) 141, 1117
ScrFI CCNGG 6 cut(s) 57, 66, 850, 953, 977, 1365
SduI GDGCHC 1 cut(s) 1413
SfaNI GCATC 1 cut(s) 88
SfcI CTRYAG 1 cut(s) 636
Sfr274I CTCGAG 1 cut(s) 494
SlaI CTCGAG 1 cut(s) 494
SmlI CTYRAG 3 cut(s) 494, 599, 901
SmoI CTYRAG 3 cut(s) 494, 599, 901
SseBI AGGCCT 1 cut(s) 1032
SsiI CCGC 1 cut(s) 1171
SspMI CTAG 4 cut(s) 155, 320, 347, 1196
StuI AGGCCT 1 cut(s) 1032
StyD4I CCNGG 6 cut(s) 55, 64, 848, 951, 975, 1363
StyI CCWWGG 1 cut(s) 611
TaaI ACNGT 6 cut(s) 831, 946, 1001, 1148, 1255, 1326
TaiI ACGT 6 cut(s) 250, 396, 802, 862, 985, 1141
TaqI TCGA 4 cut(s) 237, 495, 927, 1435
TfiI GAWTC 6 cut(s) 122, 312, 404, 430, 1376, 1432
Tru1I TTAA 7 cut(s) 170, 290, 458, 576, 629, 770, 902
Tru9I TTAA 7 cut(s) 170, 290, 458, 576, 629, 770, 902
TscAI CASTG 3 cut(s) 95, 308, 1282
TseFI GTSAC 1 cut(s) 1189
TseI GCWGC 2 cut(s) 734, 1173
Tsp45I GTSAC 1 cut(s) 1189
TspDTI ATGAA 5 cut(s) 150, 233, 316, 1095, 1389
TspGWI ACGGA 3 cut(s) 32, 599, 880
TspRI CASTG 3 cut(s) 95, 308, 1282
Tth111I GACNNNGTC 1 cut(s) 590
Vha464I CTTAAG 1 cut(s) 901
XapI RAATTY 2 cut(s) 138, 191
XbaI TCTAGA 2 cut(s) 319, 1195
XceI RCATGY 1 cut(s) 163
XcmI CCANNNNNNNNNTGG 1 cut(s) 1421
XhoI CTCGAG 1 cut(s) 494
XmiI GTMKAC 3 cut(s) 713, 822, 1047
XspI CTAG 4 cut(s) 155, 320, 347, 1196
Zsp2I ATGCAT 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.