Rw7G036190

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
54602481 .. 54605522
3042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G036190.1

Sequence Viewer

Length: 2487 bp
ATGAAGCGGTCGTCGGCGTCGTCGCCACCGCCACAGCCACCGCGACCATATTCAAATCCCTCGCGACCCAGGACGTACGACGTGTTCTTGAGCTTCAGAGGTGAAGACACACGAAGGACCTTCACGGACCACCTCTACGCAGCACTAGATCGTGCCGGAGTCAGCACGTTTAGGGATGCCGAGGGACTGCAAAGAGGGGCAAATATATCAGAGGAACTGGTGCAGATAATCCGAAAGTGTAGGATCTCTCTCATTGTCTTCTCAGAAAAGTATGCGGATTCGAGTTGGTGTCTCGAGGAGCTGGTGCAAATCATGGAGTGTAGAATAACACGAAGGCAACAGGTTTTCCCCATATTCTATCATGTTGATCCTTCACATGTCAGAAACCAGACCGGTAGTTTTGGCAAGGCATTTGAGAAACATGAAGATGTTGATCGTCATCTTGGAGCAGCTGAAACTCTTTATAGCTGGTCTGCTCTTAAAGCGAAATGCTCTACATTTTGGCAAGGTTCAAATTTGTCTACATTTTCAGATAAAAGACATCGAGGTAAAGCAGAGATGCTCTCCGGAAAACAAAAAAAACGTACAGATAAGATAGCCAGGTGGAGAGCTGCTCTCAGAGGAGCGGCGAATTTGACCGGCTTCGATATTGCTGATAGGCATGAAGCAGAATTTATTAATAGCATTGTTGACGAGATATGCAGACAGCTGAGCAACACACACTTGAATTTAGCTGTCTATCCAGTTGCAATAGATTCTCGTGTTGATGATATATGTAACTGTTTAGGTGTTGGATTAGATGATGATGTTCGCATGGTTGGAATTTGGGGTATGGGTGGAATCGGCAAAACAACAGTTGCCAAAGCCATCTATAACAAATTTTATCATGACTTTGACAGTAGAAGTTTCCTAGCAGATGTTAGGGAAACAGCAAAGGACTCAAGTGGTAAGATTGCTCTGCAAGAAAGACTTCTTTCTGATGTCTTAAAACCAGCCAAGATTGTGGTAGATGATGTTTCCAGAGGCATCAATGTGATAAGAGAACGACTTGGAAGTAAAAAGGTACTCGTCATTGTTGATGATGTGGATTGCGAGGACCAATTGACTGATTTGGCTATAAGGCGTGATACCTTTGGTCCAGGAAGTAGAATCTTTATAACAACAAGAGATCGACATTTGCTGGAACTACTGAAAGTGGATACAATACATCTAACTCAAGAAATGAATGAAGAAGAAGCTCTTGAGCTCTTCAGTTGGCATGCCTTTCAAAAGCATTCTCCTGATGAAGACTTTATCGAACTCTCAAGAAGAGTGGTTGCTTACTGTGGAGGTTTACCACTGGCTCTTGAAGTTTTAGGGTCTTTTCTGTTTAAAAGGAGTGTAAGACAATGGGAAAGCACACTGAAGAAATTGGAAAAAATTCCTGATTGCAAAATTCAGTCAAGGCTCAGAATAAGCTTCGATGCAATTGATGAGAGCCAGAGGAACATATTCCTCCATATATGTTGTTTCTTCCTTGGAATGAACAGGGAATATGTCACACATATACTGGAGTTCTGTGGTTTTGCTGCAGCAATAGAAATCAGTGTCCTGCTTCAACGTTGCCTTGTAACTGTTAATGAGAAAAACAAGCTCATGATGCACCATTTGCTTCGAGACATGGGCAGAGAAATTGTTCGTGAAGAATCCCCTAACCACCCTGAAAGACGTAGTAGACTGTGGCGTCAGGAAGATGTAAGAGATGTAATGAAAGATGAATCTGGAACTGAAGAGACCGAAGGACTCGCTCTAAATTTGCAAAGATCTGACAACATGAGTTTCAGTACAGAAGCATTTAGAAACATGAGGAGACTGATATTGCTCCAACTCAACCACGTACAACTCACTGGAGATTGCAACCAGTTTCCCAAAAAGTTAAGCTGGCTCTGCTGGCGAGGATTCTCTCCACAAGTCATGCGAAATGAGTTTCTTAATGAAACATACCTGGTTTCTATTGACCTGCGGTACAGCAATCTTGTACGAGTTTGGGAGGATTCCAGGCGGCTTTGGAATTTGGAGATACTTAATCTCAGTCATTCACATTACCTAACAAAATCACCAGACTTTTCACAACTCCCATATCTAAAGTATTTGATCCTTAAGGACTGTGTGAGTTTGCCAGAGATTCACGAGTCTGTTGGATGTCTTCGGAGACTTGCCTTGCTAAATCTCAGAGACTGCATTATGCTCAAGGACCTTCCAAAGAGTTTCTATAAGCTTAGAAAAGTTAAAACTCTTGTTCTTTCTGGCTGTTCGAGATTTTCTAATTTGGATGAGGATATAGGGGAGATGAAATCAGTGACAACACTACTCTTAAGTGGCACATCCATAACTGAAATACCATCCTCTGTACAAAGATTGGAAAACCTGGACTATTCATCTCGACAAAGCTTGAAACATGTATGGGATGAGAGTCATGAGACCGCAGGACCCAGCCATGGAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

828

Amino Acids

95.24

Weight (kDa)

7.98

Isoelectric Point (pI)

52.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 26 - 160 1.3e-44 TIR domain
TIR_2 PF13676 28 - 124 5.4e-15 TIR domain
NB-ARC PF00931 267 - 425 1.9e-19 NB-ARC domain
WHD_ROQ1 PF23282 492 - 563 2.8e-18 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1157
AasI GACNNNNNNGTC 1 cut(s) 1722
Acc36I ACCTGC 1 cut(s) 2007
AccBSI CCGCTC 1 cut(s) 626
AccI GTMKAC 2 cut(s) 521, 1714
AccII CGCG 2 cut(s) 43, 64
AccIII TCCGGA 1 cut(s) 566
AciI CCGC 8 cut(s) 7, 29, 41, 275, 626, 2002, 2041, 2463
AclI AACGTT 1 cut(s) 1600
AclWI GGATC 3 cut(s) 251, 362, 2128
AcuI CTGAAG 4 cut(s) 79, 1234, 1424, 1788
AcyI GRCGYC 2 cut(s) 17, 1723
AfaI GTAC 8 cut(s) 77, 586, 1065, 1825, 1878, 2006, 2019, 2391
AfiI CCNNNNNNNGG 1 cut(s) 2477
AflII CTTAAG 2 cut(s) 2138, 2353
AflIII ACRYGT 3 cut(s) 81, 376, 2437
AgeI ACCGGT 1 cut(s) 392
AgsI TTSAA 7 cut(s) 54, 513, 727, 1268, 1349, 1598, 2434
AjiI CACGTC 1 cut(s) 82
AjnI CCWGG 6 cut(s) 68, 599, 1138, 1983, 2036, 2406
Alw21I GWGCWC 1 cut(s) 1248
Alw26I GTCTC 7 cut(s) 296, 1650, 1766, 1843, 2185, 2208, 2453
AlwI GGATC 3 cut(s) 251, 362, 2128
AlwNI CAGNNNCTG 1 cut(s) 2217
Ama87I CYCGRG 1 cut(s) 293
Aor13HI TCCGGA 1 cut(s) 566
ApeKI GCWGC 5 cut(s) 140, 449, 611, 1568, 1571
AseI ATTAAT 1 cut(s) 678
AsiGI ACCGGT 1 cut(s) 392
Asp700I GAANNNNTTC 4 cut(s) 969, 1419, 1490, 1674
AspS9I GGNCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
AsuHPI GGTGA 2 cut(s) 113, 2088
AvaI CYCGRG 1 cut(s) 293
AvaII GGWCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
BanII GRGCYC 1 cut(s) 1248
BauI CACGAG 2 cut(s) 759, 2168
BbsI GAAGAC 4 cut(s) 111, 250, 1293, 2177
Bbv12I GWGCWC 1 cut(s) 1248
BbvI GCAGC 5 cut(s) 152, 461, 598, 1555, 1583
BccI CCATC 2 cut(s) 875, 2389
BciT130I CCWGG 6 cut(s) 70, 601, 1140, 1985, 2038, 2408
BciVI GTATCC 1 cut(s) 1192
BcoDI GTCTC 7 cut(s) 296, 1650, 1766, 1843, 2185, 2208, 2453
BfaI CTAG 2 cut(s) 146, 911
BfmI CTRYAG 1 cut(s) 1569
BfrI CTTAAG 2 cut(s) 2138, 2353
BfuAI ACCTGC 1 cut(s) 2007
BfuI GTATCC 1 cut(s) 1192
BglII AGATCT 1 cut(s) 1802
BisI GCNGC 7 cut(s) 141, 450, 612, 627, 1569, 1572, 2042
BlpI GCTNAGC 1 cut(s) 710
BlsI GCNGC 7 cut(s) 142, 451, 613, 628, 1570, 1573, 2043
Bme1390I CCNGG 6 cut(s) 70, 601, 1140, 1985, 2038, 2408
Bme18I GGWCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
BmeT110I CYCGRG 1 cut(s) 293
BmgBI CACGTC 1 cut(s) 82
BmgT120I GGNCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
BmiI GGNNCC 1 cut(s) 2470
BmrFI CCNGG 6 cut(s) 70, 601, 1140, 1985, 2038, 2408
BmsI GCATC 5 cut(s) 166, 549, 1035, 1453, 1629
BpiI GAAGAC 4 cut(s) 111, 250, 1293, 2177
BplI GAGNNNNNCTC 6 cut(s) 548, 580, 598, 630, 600, 632
BpmI CTGGAG 2 cut(s) 1571, 1908
Bpu1102I GCTNAGC 1 cut(s) 710
BpuEI CTTGAG 6 cut(s) 109, 925, 1200, 1262, 1288, 2213
BsaAI YACGTR 1 cut(s) 1876
BsaBI GATNNNNATC 2 cut(s) 432, 438
BsaHI GRCGYC 2 cut(s) 17, 1723
BsaI GGTCTC 2 cut(s) 1766, 2453
BsaJI CCNNGG 4 cut(s) 68, 180, 1516, 2476
BsaWI WCCGGW 2 cut(s) 392, 566
Bsc4I CCNNNNNNNGG 1 cut(s) 2477
Bse118I RCCGGY 2 cut(s) 392, 638
Bse1I ACTGG 6 cut(s) 222, 743, 1344, 1554, 1891, 1900
Bse8I GATNNNNATC 2 cut(s) 432, 438
BseAI TCCGGA 1 cut(s) 566
BseBI CCWGG 6 cut(s) 70, 601, 1140, 1985, 2038, 2408
BseDI CCNNGG 4 cut(s) 68, 180, 1516, 2476
BseGI GGATG 6 cut(s) 181, 2186, 2317, 2363, 2381, 2452
BseJI GATNNNNATC 2 cut(s) 432, 438
BseLI CCNNNNNNNGG 1 cut(s) 2477
BseMII CTCAG 6 cut(s) 276, 631, 701, 1462, 2083, 2224
BseNI ACTGG 6 cut(s) 222, 743, 1344, 1554, 1891, 1900
BseRI GAGGAG 3 cut(s) 311, 636, 1861
BseXI GCAGC 5 cut(s) 152, 461, 598, 1555, 1583
BseYI CCCAGC 1 cut(s) 2471
BsgI GTGCAG 1 cut(s) 242
Bsh1236I CGCG 2 cut(s) 43, 64
Bsh1285I CGRYCG 1 cut(s) 11
BshTI ACCGGT 1 cut(s) 392
BsiEI CGRYCG 1 cut(s) 11
BsiHKAI GWGCWC 1 cut(s) 1248
BsiHKCI CYCGRG 1 cut(s) 293
BsiSI CCGG 4 cut(s) 156, 393, 567, 639
BsiWI CGTACG 1 cut(s) 75
BslFI GGGAC 1 cut(s) 198
BslI CCNNNNNNNGG 1 cut(s) 2477
BsmAI GTCTC 7 cut(s) 296, 1650, 1766, 1843, 2185, 2208, 2453
BsmFI GGGAC 1 cut(s) 198
BsmI GAATGC 1 cut(s) 1273
Bso31I GGTCTC 2 cut(s) 1766, 2453
BsoBI CYCGRG 1 cut(s) 293
Bsp1286I GDGCHC 1 cut(s) 1248
Bsp13I TCCGGA 1 cut(s) 566
Bsp1407I TGTACA 1 cut(s) 2389
Bsp143I GATC 7 cut(s) 148, 243, 367, 433, 1168, 1802, 2133
Bsp1720I GCTNAGC 1 cut(s) 710
Bsp19I CCATGG 1 cut(s) 2476
Bsp68I TCGCGA 1 cut(s) 64
BspACI CCGC 8 cut(s) 7, 29, 41, 275, 626, 2002, 2041, 2463
BspCNI CTCAG 6 cut(s) 275, 630, 702, 1461, 2082, 2223
BspEI TCCGGA 1 cut(s) 566
BspFNI CGCG 2 cut(s) 43, 64
BspHI TCATGA 3 cut(s) 886, 1635, 2455
BspLI GGNNCC 1 cut(s) 2470
BspMAI CTGCAG 1 cut(s) 1573
BspMI ACCTGC 1 cut(s) 2007
BspPI GGATC 3 cut(s) 251, 362, 2128
BspQI GCTCTTC 1 cut(s) 1253
BspTI CTTAAG 2 cut(s) 2138, 2353
BspTNI GGTCTC 2 cut(s) 1766, 2453
BsrBI CCGCTC 1 cut(s) 626
BsrFI RCCGGY 2 cut(s) 392, 638
BsrGI TGTACA 1 cut(s) 2389
BsrI ACTGG 6 cut(s) 222, 743, 1344, 1554, 1891, 1900
BssAI RCCGGY 2 cut(s) 392, 638
BssECI CCNNGG 4 cut(s) 68, 180, 1516, 2476
BssMI GATC 7 cut(s) 148, 243, 367, 433, 1168, 1802, 2133
BssNI GRCGYC 2 cut(s) 17, 1723
BssSI CACGAG 2 cut(s) 759, 2168
BssT1I CCWWGG 2 cut(s) 1516, 2476
Bst2BI CACGAG 2 cut(s) 759, 2168
Bst2UI CCWGG 6 cut(s) 70, 601, 1140, 1985, 2038, 2408
Bst4CI ACNGT 7 cut(s) 782, 856, 899, 1325, 1615, 1719, 2147
Bst6I CTCTTC 3 cut(s) 1253, 1303, 1764
BstACI GRCGYC 2 cut(s) 17, 1723
BstAFI CTTAAG 2 cut(s) 2138, 2353
BstAPI GCANNNNNTGC 1 cut(s) 1648
BstAUI TGTACA 1 cut(s) 2389
BstBAI YACGTR 1 cut(s) 1876
BstC8I GCNNGC 3 cut(s) 1260, 1922, 1931
BstDEI CTNAG 7 cut(s) 262, 617, 710, 1448, 2069, 2210, 2258
BstDSI CCRYGG 1 cut(s) 2476
BstF5I GGATG 6 cut(s) 181, 2186, 2317, 2363, 2381, 2452
BstFNI CGCG 2 cut(s) 43, 64
BstKTI GATC 7 cut(s) 151, 246, 370, 436, 1171, 1805, 2136
BstMAI GTCTC 7 cut(s) 296, 1650, 1766, 1843, 2185, 2208, 2453
BstMBI GATC 7 cut(s) 148, 243, 367, 433, 1168, 1802, 2133
BstMCI CGRYCG 1 cut(s) 11
BstMWI GCNNNNNNNGC 5 cut(s) 482, 1639, 1648, 1926, 1930
BstNI CCWGG 6 cut(s) 70, 601, 1140, 1985, 2038, 2408
BstNSI RCATGY 3 cut(s) 380, 1262, 2441
BstSCI CCNGG 6 cut(s) 68, 599, 1138, 1983, 2036, 2406
BstSFI CTRYAG 1 cut(s) 1569
BstUI CGCG 2 cut(s) 43, 64
BstV1I GCAGC 5 cut(s) 152, 461, 598, 1555, 1583
BstV2I GAAGAC 4 cut(s) 111, 250, 1293, 2177
BstX2I RGATCY 2 cut(s) 243, 1802
BstXI CCANNNNNNTGG 1 cut(s) 1003
BstYI RGATCY 2 cut(s) 243, 1802
BsuI GTATCC 1 cut(s) 1192
BtgI CCRYGG 1 cut(s) 2476
BtrI CACGTC 1 cut(s) 82
BtsCI GGATG 6 cut(s) 181, 2186, 2317, 2363, 2381, 2452
BtsIMutI CAGTG 5 cut(s) 1337, 1400, 1591, 1884, 2343
BtuMI TCGCGA 1 cut(s) 64
BveI ACCTGC 1 cut(s) 2007
Cac8I GCNNGC 3 cut(s) 1260, 1922, 1931
CaiI CAGNNNCTG 1 cut(s) 2217
CciI TCATGA 3 cut(s) 886, 1635, 2455
Cfr10I RCCGGY 2 cut(s) 392, 638
Cfr13I GGNCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
CseI GACGC 2 cut(s) 6, 1712
CsiI ACCWGGT 1 cut(s) 1983
Csp6I GTAC 8 cut(s) 76, 585, 1064, 1824, 1877, 2005, 2018, 2390
CspAI ACCGGT 1 cut(s) 392
CspCI CAANNNNNGTGG 2 cut(s) 1293, 1328
CviQI GTAC 8 cut(s) 76, 585, 1064, 1824, 1877, 2005, 2018, 2390
DdeI CTNAG 7 cut(s) 262, 617, 710, 1448, 2069, 2210, 2258
DpnI GATC 7 cut(s) 150, 245, 369, 435, 1170, 1804, 2135
DpnII GATC 7 cut(s) 148, 243, 367, 433, 1168, 1802, 2133
DraI TTTAAA 1 cut(s) 1372
DrdI GACNNNNNNGTC 1 cut(s) 1722
DseDI GACNNNNNNGTC 1 cut(s) 1722
Eam1104I CTCTTC 3 cut(s) 1253, 1303, 1764
EarI CTCTTC 3 cut(s) 1253, 1303, 1764
Ecl136II GAGCTC 1 cut(s) 1246
Eco130I CCWWGG 2 cut(s) 1516, 2476
Eco24I GRGCYC 1 cut(s) 1248
Eco31I GGTCTC 2 cut(s) 1766, 2453
Eco47I GGWCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
Eco53kI GAGCTC 1 cut(s) 1246
Eco57I CTGAAG 4 cut(s) 79, 1234, 1424, 1788
Eco88I CYCGRG 1 cut(s) 293
EcoICRI GAGCTC 1 cut(s) 1246
EcoO109I RGGNCCY 3 cut(s) 117, 2233, 2468
EcoRII CCWGG 6 cut(s) 68, 599, 1138, 1983, 2036, 2406
EcoT14I CCWWGG 2 cut(s) 1516, 2476
EcoT38I GRGCYC 1 cut(s) 1248
ErhI CCWWGG 2 cut(s) 1516, 2476
FalI AAGNNNNNCTT 4 cut(s) 954, 986, 1224, 1256
FaqI GGGAC 1 cut(s) 198
FblI GTMKAC 2 cut(s) 521, 1714
Fnu4HI GCNGC 7 cut(s) 141, 450, 612, 627, 1569, 1572, 2042
FokI GGATG 6 cut(s) 188, 2193, 2324, 2350, 2368, 2459
FriOI GRGCYC 1 cut(s) 1248
Fsp4HI GCNGC 7 cut(s) 141, 450, 612, 627, 1569, 1572, 2042
FspBI CTAG 2 cut(s) 146, 911
GluI GCNGC 7 cut(s) 141, 450, 612, 627, 1569, 1572, 2042
GsaI CCCAGC 1 cut(s) 2475
GsuI CTGGAG 2 cut(s) 1571, 1908
HapII CCGG 4 cut(s) 156, 393, 567, 639
HgaI GACGC 2 cut(s) 6, 1712
Hin1I GRCGYC 2 cut(s) 17, 1723
HincII GTYRAC 1 cut(s) 691
HindII GTYRAC 1 cut(s) 691
HindIII AAGCTT 3 cut(s) 1456, 2255, 2428
HpaII CCGG 4 cut(s) 156, 393, 567, 639
HphI GGTGA 2 cut(s) 113, 2088
Hpy166II GTNNAC 4 cut(s) 522, 691, 1334, 1715
Hpy8I GTNNAC 4 cut(s) 522, 691, 1334, 1715
Hpy99I CGWCG 4 cut(s) 16, 22, 25, 83
HpyAV CCTTC 6 cut(s) 108, 130, 327, 381, 1772, 2246
HpyCH4III ACNGT 7 cut(s) 782, 856, 899, 1325, 1615, 1719, 2147
HpyCH4IV ACGT 7 cut(s) 74, 81, 167, 583, 1600, 1708, 1875
HpyF10VI GCNNNNNNNGC 5 cut(s) 482, 1639, 1648, 1926, 1930
HpyF3I CTNAG 7 cut(s) 262, 617, 710, 1448, 2069, 2210, 2258
HpySE526I ACGT 7 cut(s) 74, 81, 167, 583, 1600, 1708, 1875
Hsp92I GRCGYC 2 cut(s) 17, 1723
Kpn2I TCCGGA 1 cut(s) 566
Kzo9I GATC 7 cut(s) 148, 243, 367, 433, 1168, 1802, 2133
LguI GCTCTTC 1 cut(s) 1253
LmnI GCTCC 4 cut(s) 298, 446, 623, 1866
Lsp1109I GCAGC 5 cut(s) 152, 461, 598, 1555, 1583
LweI GCATC 5 cut(s) 166, 549, 1035, 1453, 1629
MabI ACCWGGT 1 cut(s) 1983
MaeI CTAG 2 cut(s) 146, 911
MaeII ACGT 7 cut(s) 74, 81, 167, 583, 1600, 1708, 1875
MaeIII GTNAC 4 cut(s) 776, 1537, 1609, 2338
MalI GATC 7 cut(s) 150, 245, 369, 435, 1170, 1804, 2135
MbiI CCGCTC 1 cut(s) 626
MboI GATC 7 cut(s) 148, 243, 367, 433, 1168, 1802, 2133
MfeI CAATTG 2 cut(s) 1100, 1467
MflI RGATCY 2 cut(s) 243, 1802
MhlI GDGCHC 1 cut(s) 1248
MlyI GAGTC 5 cut(s) 168, 932, 1776, 2180, 2461
MmeI TCCRAC 4 cut(s) 772, 799, 1888, 2158
MroI TCCGGA 1 cut(s) 566
MroXI GAANNNNTTC 4 cut(s) 969, 1419, 1490, 1674
MslI CAYNNNNRTG 2 cut(s) 426, 1031
MspA1I CMGCKG 2 cut(s) 452, 709
MspCI CTTAAG 2 cut(s) 2138, 2353
MspI CCGG 4 cut(s) 156, 393, 567, 639
MspR9I CCNGG 6 cut(s) 70, 601, 1140, 1985, 2038, 2408
MunI CAATTG 2 cut(s) 1100, 1467
Mva1269I GAATGC 1 cut(s) 1273
MvaI CCWGG 6 cut(s) 70, 601, 1140, 1985, 2038, 2408
MvnI CGCG 2 cut(s) 43, 64
MwoI GCNNNNNNNGC 5 cut(s) 482, 1639, 1648, 1926, 1930
NcoI CCATGG 1 cut(s) 2476
NdeII GATC 7 cut(s) 148, 243, 367, 433, 1168, 1802, 2133
NlaIV GGNNCC 1 cut(s) 2470
NmeAIII GCCGAG 1 cut(s) 205
NmuCI GTSAC 2 cut(s) 1537, 2338
NruI TCGCGA 1 cut(s) 64
NspI RCATGY 3 cut(s) 380, 1262, 2441
PaeI GCATGC 1 cut(s) 1262
PaeR7I CTCGAG 1 cut(s) 293
PagI TCATGA 3 cut(s) 886, 1635, 2455
PciI ACATGT 2 cut(s) 376, 2437
PciSI GCTCTTC 1 cut(s) 1253
PcsI WCGNNNNNNNCGW 1 cut(s) 17
PctI GAATGC 1 cut(s) 1273
PdmI GAANNNNTTC 4 cut(s) 969, 1419, 1490, 1674
Pfl23II CGTACG 1 cut(s) 75
PfoI TCCNGGA 1 cut(s) 1138
PinAI ACCGGT 1 cut(s) 392
PkrI GCNGC 7 cut(s) 142, 451, 613, 628, 1570, 1573, 2043
PleI GAGTC 5 cut(s) 167, 932, 1776, 2179, 2460
PpsI GAGTC 5 cut(s) 167, 932, 1776, 2179, 2460
Ppu21I YACGTR 1 cut(s) 1876
PpuMI RGGWCCY 3 cut(s) 117, 2233, 2468
PscI ACATGT 2 cut(s) 376, 2437
PshBI ATTAAT 1 cut(s) 678
PsiI TTATAA 1 cut(s) 1157
Psp124BI GAGCTC 1 cut(s) 1248
Psp1406I AACGTT 1 cut(s) 1600
Psp5II RGGWCCY 3 cut(s) 117, 2233, 2468
Psp6I CCWGG 6 cut(s) 68, 599, 1138, 1983, 2036, 2406
PspFI CCCAGC 1 cut(s) 2471
PspGI CCWGG 6 cut(s) 68, 599, 1138, 1983, 2036, 2406
PspLI CGTACG 1 cut(s) 75
PspN4I GGNNCC 1 cut(s) 2470
PspPI GGNCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
PspPPI RGGWCCY 3 cut(s) 117, 2233, 2468
PsrI GAACNNNNNNTAC 2 cut(s) 68, 100
PstI CTGCAG 1 cut(s) 1573
PstNI CAGNNNCTG 1 cut(s) 2217
PsuI RGATCY 2 cut(s) 243, 1802
PvuII CAGCTG 2 cut(s) 452, 709
RruI TCGCGA 1 cut(s) 64
RsaI GTAC 8 cut(s) 77, 586, 1065, 1825, 1878, 2006, 2019, 2391
RsaNI GTAC 8 cut(s) 76, 585, 1064, 1824, 1877, 2005, 2018, 2390
RseI CAYNNNNRTG 2 cut(s) 426, 1031
SacI GAGCTC 1 cut(s) 1248
SapI GCTCTTC 1 cut(s) 1253
SatI GCNGC 7 cut(s) 141, 450, 612, 627, 1569, 1572, 2042
Sau3AI GATC 7 cut(s) 148, 243, 367, 433, 1168, 1802, 2133
Sau96I GGNCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
SchI GAGTC 5 cut(s) 168, 932, 1776, 2180, 2461
ScrFI CCNGG 6 cut(s) 70, 601, 1140, 1985, 2038, 2408
SduI GDGCHC 1 cut(s) 1248
SexAI ACCWGGT 1 cut(s) 1983
SfaNI GCATC 5 cut(s) 166, 549, 1035, 1453, 1629
SfcI CTRYAG 1 cut(s) 1569
Sfr274I CTCGAG 1 cut(s) 293
SinI GGWCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
SlaI CTCGAG 1 cut(s) 293
SmiMI CAYNNNNRTG 2 cut(s) 426, 1031
SmlI CTYRAG 9 cut(s) 88, 293, 940, 1215, 1241, 1303, 2138, 2228, 2353
SmoI CTYRAG 9 cut(s) 88, 293, 940, 1215, 1241, 1303, 2138, 2228, 2353
SphI GCATGC 1 cut(s) 1262
SsiI CCGC 8 cut(s) 7, 29, 41, 275, 626, 2002, 2041, 2463
SspMI CTAG 2 cut(s) 146, 911
SstI GAGCTC 1 cut(s) 1248
StyD4I CCNGG 6 cut(s) 68, 599, 1138, 1983, 2036, 2406
StyI CCWWGG 2 cut(s) 1516, 2476
TaaI ACNGT 7 cut(s) 782, 856, 899, 1325, 1615, 1719, 2147
TaiI ACGT 7 cut(s) 77, 84, 170, 586, 1603, 1711, 1878
TaqII GACCGA 1 cut(s) 1790
TatI WGTACW 2 cut(s) 1823, 2389
TauI GCSGC 2 cut(s) 629, 2044
TscAI CASTG 5 cut(s) 1344, 1407, 1591, 1891, 2343
TseFI GTSAC 2 cut(s) 1537, 2338
TseI GCWGC 5 cut(s) 140, 449, 611, 1568, 1571
Tsp45I GTSAC 2 cut(s) 1537, 2338
TspGWI ACGGA 1 cut(s) 140
TspRI CASTG 5 cut(s) 1344, 1407, 1591, 1891, 2343
Vha464I CTTAAG 2 cut(s) 2138, 2353
VpaK11BI GGWCC 6 cut(s) 117, 127, 1096, 1136, 2233, 2468
VspI ATTAAT 1 cut(s) 678
XceI RCATGY 3 cut(s) 380, 1262, 2441
XhoI CTCGAG 1 cut(s) 293
XmiI GTMKAC 2 cut(s) 521, 1714
XmnI GAANNNNTTC 4 cut(s) 969, 1419, 1490, 1674
XspI CTAG 2 cut(s) 146, 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.