TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 7 - 174 | 2.9e-48 | TIR domain |
| TIR_2 | PF13676 | 10 - 106 | 6.8e-15 | TIR domain |
| NB-ARC | PF00931 | 187 - 355 | 4.5e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 427 - 495 | 4e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_RPS2 | PF23247 | 636 - 751 | 5.5e-08 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 947 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2723 |
| AccBSI | CCGCTC | 1 cut(s) | 435 |
| AccI | GTMKAC | 1 cut(s) | 5 |
| AccII | CGCG | 1 cut(s) | 2267 |
| AciI | CCGC | 7 cut(s) | 218, 435, 639, 1642, 2066, 2325, 2354 |
| AclI | AACGTT | 1 cut(s) | 473 |
| AclWI | GGATC | 4 cut(s) | 305, 594, 607, 1527 |
| AcoI | YGGCCR | 2 cut(s) | 493, 1270 |
| AcsI | RAATTY | 6 cut(s) | 624, 1227, 1236, 1675, 2047, 2098 |
| AcuI | CTGAAG | 6 cut(s) | 182, 300, 533, 1600, 2006, 2391 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1279, 1336, 1373, 2065, 2662 |
| AflII | CTTAAG | 2 cut(s) | 1241, 1988 |
| AflIII | ACRYGT | 5 cut(s) | 27, 690, 704, 1537, 1830 |
| AhlI | ACTAGT | 1 cut(s) | 2671 |
| AjiI | CACGTC | 1 cut(s) | 28 |
| AjnI | CCWGG | 5 cut(s) | 928, 1272, 2655, 2742, 2797 |
| Alw21I | GWGCWC | 4 cut(s) | 1038, 2219, 2556, 2593 |
| Alw26I | GTCTC | 2 cut(s) | 1096, 1446 |
| Alw44I | GTGCAC | 2 cut(s) | 2215, 2589 |
| AlwI | GGATC | 4 cut(s) | 305, 594, 607, 1527 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1601 |
| AoxI | GGCC | 3 cut(s) | 493, 1270, 1746 |
| ApaLI | GTGCAC | 2 cut(s) | 2215, 2589 |
| ApeKI | GCWGC | 4 cut(s) | 15, 191, 422, 2231 |
| ApoI | RAATTY | 6 cut(s) | 624, 1227, 1236, 1675, 2047, 2098 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 375, 407 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 556, 2019 |
| AspLEI | GCGC | 1 cut(s) | 2267 |
| AspS9I | GGNCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| AsuC2I | CCSGG | 1 cut(s) | 2295 |
| AsuHPI | GGTGA | 9 cut(s) | 808, 1288, 1868, 1881, 1952, 2291, 2351, 2438, 2572 |
| AsuII | TTCGAA | 1 cut(s) | 715 |
| AvaII | GGWCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| AxyI | CCTNAGG | 1 cut(s) | 2334 |
| BaeGI | GKGCMC | 2 cut(s) | 2219, 2593 |
| BalI | TGGCCA | 2 cut(s) | 495, 1272 |
| BamHI | GGATCC | 1 cut(s) | 599 |
| BanII | GRGCYC | 2 cut(s) | 1038, 2556 |
| BauI | CACGAG | 1 cut(s) | 561 |
| Bbv12I | GWGCWC | 4 cut(s) | 1038, 2219, 2556, 2593 |
| BbvI | GCAGC | 4 cut(s) | 27, 178, 409, 2218 |
| BccI | CCATC | 8 cut(s) | 203, 222, 628, 692, 1262, 1343, 1710, 2317 |
| BceAI | ACGGC | 1 cut(s) | 366 |
| BciT130I | CCWGG | 5 cut(s) | 930, 1274, 2657, 2744, 2799 |
| BclI | TGATCA | 1 cut(s) | 1873 |
| BcnI | CCSGG | 1 cut(s) | 2295 |
| BcoDI | GTCTC | 2 cut(s) | 1096, 1446 |
| BcuI | ACTAGT | 1 cut(s) | 2671 |
| BfaI | CTAG | 6 cut(s) | 135, 504, 644, 1418, 2165, 2672 |
| BfmI | CTRYAG | 5 cut(s) | 423, 971, 1143, 1742, 2252 |
| BfrI | CTTAAG | 2 cut(s) | 1241, 1988 |
| BisI | GCNGC | 6 cut(s) | 16, 192, 423, 436, 2232, 2354 |
| BlpI | GCTNAGC | 1 cut(s) | 1610 |
| BlsI | GCNGC | 6 cut(s) | 17, 193, 424, 437, 2233, 2355 |
| BmcAI | AGTACT | 1 cut(s) | 2614 |
| Bme1390I | CCNGG | 6 cut(s) | 930, 1274, 2295, 2657, 2744, 2799 |
| Bme18I | GGWCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| BmgBI | CACGTC | 1 cut(s) | 28 |
| BmgT120I | GGNCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| BmiI | GGNNCC | 4 cut(s) | 181, 601, 817, 1646 |
| BmrFI | CCNGG | 6 cut(s) | 930, 1274, 2295, 2657, 2744, 2799 |
| BmrI | ACTGGG | 1 cut(s) | 284 |
| BmuI | ACTGGG | 1 cut(s) | 284 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2788 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 394, 426, 2758, 2790 |
| BpmI | CTGGAG | 1 cut(s) | 2678 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1610 |
| Bpu14I | TTCGAA | 1 cut(s) | 715 |
| BpuEI | CTTGAG | 6 cut(s) | 55, 257, 796, 1052, 1078, 2540 |
| BpuMI | CCSGG | 1 cut(s) | 2295 |
| Bsa29I | ATCGAT | 1 cut(s) | 1396 |
| BsaAI | YACGTR | 2 cut(s) | 1160, 1475 |
| BsaBI | GATNNNNATC | 4 cut(s) | 309, 1764, 2625, 2727 |
| BsaJI | CCNNGG | 4 cut(s) | 819, 2293, 2797, 2798 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1279, 1336, 1373, 2065, 2662 |
| Bse1I | ACTGG | 5 cut(s) | 279, 340, 545, 744, 1687 |
| Bse21I | CCTNAGG | 1 cut(s) | 2334 |
| Bse3DI | GCAATG | 4 cut(s) | 1017, 1559, 2076, 2363 |
| Bse8I | GATNNNNATC | 4 cut(s) | 309, 1764, 2625, 2727 |
| BseBI | CCWGG | 5 cut(s) | 930, 1274, 2657, 2744, 2799 |
| BseCI | ATCGAT | 1 cut(s) | 1396 |
| BseDI | CCNNGG | 4 cut(s) | 819, 2293, 2797, 2798 |
| BseGI | GGATG | 8 cut(s) | 148, 639, 964, 1354, 2074, 2321, 2439, 2728 |
| BseJI | GATNNNNATC | 4 cut(s) | 309, 1764, 2625, 2727 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1279, 1336, 1373, 2065, 2662 |
| BseMI | GCAATG | 4 cut(s) | 1017, 1559, 2076, 2363 |
| BseMII | CTCAG | 8 cut(s) | 1640, 1722, 1784, 2148, 2460, 2621, 2751, 2777 |
| BseNI | ACTGG | 5 cut(s) | 279, 340, 545, 744, 1687 |
| BseRI | GAGGAG | 3 cut(s) | 254, 836, 2777 |
| BseSI | GKGCMC | 2 cut(s) | 2219, 2593 |
| BseXI | GCAGC | 4 cut(s) | 27, 178, 409, 2218 |
| BseYI | CCCAGC | 1 cut(s) | 2530 |
| BsgI | GTGCAG | 3 cut(s) | 34, 283, 2657 |
| Bsh1236I | CGCG | 1 cut(s) | 2267 |
| Bsh1285I | CGRYCG | 1 cut(s) | 398 |
| BshFI | GGCC | 3 cut(s) | 495, 1272, 1748 |
| BshVI | ATCGAT | 1 cut(s) | 1396 |
| BsiEI | CGRYCG | 1 cut(s) | 398 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1038, 2219, 2556, 2593 |
| BsiSI | CCGG | 1 cut(s) | 2295 |
| BslFI | GGGAC | 3 cut(s) | 829, 2547, 2585 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1279, 1336, 1373, 2065, 2662 |
| BsmAI | GTCTC | 2 cut(s) | 1096, 1446 |
| BsmFI | GGGAC | 3 cut(s) | 829, 2547, 2585 |
| BsmI | GAATGC | 1 cut(s) | 1628 |
| BsnI | GGCC | 3 cut(s) | 495, 1272, 1748 |
| Bsp119I | TTCGAA | 1 cut(s) | 715 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1038, 2219, 2556, 2593 |
| Bsp1407I | TGTACA | 1 cut(s) | 83 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1610 |
| BspACI | CCGC | 7 cut(s) | 218, 435, 639, 1642, 2066, 2325, 2354 |
| BspANI | GGCC | 3 cut(s) | 495, 1272, 1748 |
| BspCNI | CTCAG | 8 cut(s) | 1641, 1723, 1785, 2149, 2461, 2622, 2752, 2778 |
| BspDI | ATCGAT | 1 cut(s) | 1396 |
| BspFNI | CGCG | 1 cut(s) | 2267 |
| BspHI | TCATGA | 1 cut(s) | 1522 |
| BspLI | GGNNCC | 4 cut(s) | 181, 601, 817, 1646 |
| BspMAI | CTGCAG | 2 cut(s) | 427, 1746 |
| BspPI | GGATC | 4 cut(s) | 305, 594, 607, 1527 |
| BspT104I | TTCGAA | 1 cut(s) | 715 |
| BspTI | CTTAAG | 2 cut(s) | 1241, 1988 |
| BsrBI | CCGCTC | 1 cut(s) | 435 |
| BsrDI | GCAATG | 4 cut(s) | 1017, 1559, 2076, 2363 |
| BsrGI | TGTACA | 1 cut(s) | 83 |
| BsrI | ACTGG | 5 cut(s) | 279, 340, 545, 744, 1687 |
| BssECI | CCNNGG | 4 cut(s) | 819, 2293, 2797, 2798 |
| BssNAI | GTATAC | 1 cut(s) | 6 |
| BssSI | CACGAG | 1 cut(s) | 561 |
| Bst1107I | GTATAC | 1 cut(s) | 6 |
| Bst2BI | CACGAG | 1 cut(s) | 561 |
| Bst2UI | CCWGG | 5 cut(s) | 930, 1274, 2657, 2744, 2799 |
| Bst4CI | ACNGT | 9 cut(s) | 83, 805, 881, 1331, 1361, 1411, 1691, 2500, 2567 |
| Bst6I | CTCTTC | 1 cut(s) | 1701 |
| BstAFI | CTTAAG | 2 cut(s) | 1241, 1988 |
| BstAUI | TGTACA | 1 cut(s) | 83 |
| BstBAI | YACGTR | 2 cut(s) | 1160, 1475 |
| BstBI | TTCGAA | 1 cut(s) | 715 |
| BstC8I | GCNNGC | 6 cut(s) | 168, 523, 1008, 1746, 2171, 2269 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2660 |
| BstF5I | GGATG | 8 cut(s) | 148, 639, 964, 1354, 2074, 2321, 2439, 2728 |
| BstFNI | CGCG | 1 cut(s) | 2267 |
| BstHHI | GCGC | 1 cut(s) | 2267 |
| BstMAI | GTCTC | 2 cut(s) | 1096, 1446 |
| BstMCI | CGRYCG | 1 cut(s) | 398 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 45, 54, 1139 |
| BstNI | CCWGG | 5 cut(s) | 930, 1274, 2657, 2744, 2799 |
| BstNSI | RCATGY | 4 cut(s) | 525, 694, 708, 1541 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2788 |
| BstSCI | CCNGG | 6 cut(s) | 928, 1272, 2293, 2655, 2742, 2797 |
| BstSFI | CTRYAG | 5 cut(s) | 423, 971, 1143, 1742, 2252 |
| BstSLI | GKGCMC | 2 cut(s) | 2219, 2593 |
| BstSNI | TACGTA | 1 cut(s) | 1160 |
| BstUI | CGCG | 1 cut(s) | 2267 |
| BstV1I | GCAGC | 4 cut(s) | 27, 178, 409, 2218 |
| BstX2I | RGATCY | 1 cut(s) | 599 |
| BstYI | RGATCY | 1 cut(s) | 599 |
| BstZ17I | GTATAC | 1 cut(s) | 6 |
| Bsu15I | ATCGAT | 1 cut(s) | 1396 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2334 |
| BsuRI | GGCC | 3 cut(s) | 495, 1272, 1748 |
| BsuTUI | ATCGAT | 1 cut(s) | 1396 |
| BtrI | CACGTC | 1 cut(s) | 28 |
| BtsCI | GGATG | 8 cut(s) | 148, 639, 964, 1354, 2074, 2321, 2439, 2728 |
| BtsI | GCAGTG | 1 cut(s) | 2226 |
| BtsIMutI | CAGTG | 6 cut(s) | 272, 1680, 1687, 2154, 2226, 2466 |
| Cac8I | GCNNGC | 6 cut(s) | 168, 523, 1008, 1746, 2171, 2269 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1601 |
| CciI | TCATGA | 1 cut(s) | 1522 |
| CfoI | GCGC | 1 cut(s) | 2267 |
| Cfr13I | GGNCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| ClaI | ATCGAT | 1 cut(s) | 1396 |
| CsiI | ACCWGGT | 1 cut(s) | 2742 |
| DraI | TTTAAA | 1 cut(s) | 2239 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2723 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2723 |
| EaeI | YGGCCR | 2 cut(s) | 493, 1270 |
| Eam1104I | CTCTTC | 1 cut(s) | 1701 |
| EarI | CTCTTC | 1 cut(s) | 1701 |
| EciI | GGCGGA | 1 cut(s) | 654 |
| Ecl136II | GAGCTC | 2 cut(s) | 1036, 2554 |
| Eco105I | TACGTA | 1 cut(s) | 1160 |
| Eco24I | GRGCYC | 2 cut(s) | 1038, 2556 |
| Eco47I | GGWCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| Eco53kI | GAGCTC | 2 cut(s) | 1036, 2554 |
| Eco57I | CTGAAG | 6 cut(s) | 182, 300, 533, 1600, 2006, 2391 |
| Eco81I | CCTNAGG | 1 cut(s) | 2334 |
| EcoICRI | GAGCTC | 2 cut(s) | 1036, 2554 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2660 |
| EcoRII | CCWGG | 5 cut(s) | 928, 1272, 2655, 2742, 2797 |
| EcoT22I | ATGCAT | 1 cut(s) | 1440 |
| EcoT38I | GRGCYC | 2 cut(s) | 1038, 2556 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1598, 1630 |
| FaqI | GGGAC | 3 cut(s) | 829, 2547, 2585 |
| FbaI | TGATCA | 1 cut(s) | 1873 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| Fnu4HI | GCNGC | 6 cut(s) | 16, 192, 423, 436, 2232, 2354 |
| FokI | GGATG | 8 cut(s) | 155, 646, 971, 1361, 2081, 2308, 2426, 2735 |
| FriOI | GRGCYC | 2 cut(s) | 1038, 2556 |
| Fsp4HI | GCNGC | 6 cut(s) | 16, 192, 423, 436, 2232, 2354 |
| FspBI | CTAG | 6 cut(s) | 135, 504, 644, 1418, 2165, 2672 |
| GlaI | GCGC | 1 cut(s) | 2266 |
| GluI | GCNGC | 6 cut(s) | 16, 192, 423, 436, 2232, 2354 |
| GsaI | CCCAGC | 1 cut(s) | 2534 |
| GsuI | CTGGAG | 1 cut(s) | 2678 |
| HaeIII | GGCC | 3 cut(s) | 495, 1272, 1748 |
| HapII | CCGG | 1 cut(s) | 2295 |
| HhaI | GCGC | 1 cut(s) | 2267 |
| Hin6I | GCGC | 1 cut(s) | 2265 |
| HinP1I | GCGC | 1 cut(s) | 2265 |
| HincII | GTYRAC | 2 cut(s) | 281, 1783 |
| HindII | GTYRAC | 2 cut(s) | 281, 1783 |
| HindIII | AAGCTT | 2 cut(s) | 1493, 1607 |
| HpaII | CCGG | 1 cut(s) | 2295 |
| HphI | GGTGA | 9 cut(s) | 808, 1288, 1868, 1881, 1952, 2291, 2351, 2438, 2572 |
| Hpy99I | CGWCG | 1 cut(s) | 29 |
| HpyCH4III | ACNGT | 9 cut(s) | 83, 805, 881, 1331, 1361, 1411, 1691, 2500, 2567 |
| HpyCH4IV | ACGT | 6 cut(s) | 27, 473, 913, 1159, 1474, 1830 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 45, 54, 1139 |
| HpySE526I | ACGT | 6 cut(s) | 27, 473, 913, 1159, 1474, 1830 |
| HspAI | GCGC | 1 cut(s) | 2265 |
| Ksp22I | TGATCA | 1 cut(s) | 1873 |
| LmnI | GCTCC | 4 cut(s) | 241, 1041, 2262, 2659 |
| Lsp1109I | GCAGC | 4 cut(s) | 27, 178, 409, 2218 |
| MabI | ACCWGGT | 1 cut(s) | 2742 |
| MaeI | CTAG | 6 cut(s) | 135, 504, 644, 1418, 2165, 2672 |
| MaeII | ACGT | 6 cut(s) | 27, 473, 913, 1159, 1474, 1830 |
| MaeIII | GTNAC | 5 cut(s) | 451, 1355, 1405, 1833, 2500 |
| MbiI | CCGCTC | 1 cut(s) | 435 |
| MfeI | CAATTG | 1 cut(s) | 1976 |
| MflI | RGATCY | 1 cut(s) | 599 |
| MhlI | GDGCHC | 4 cut(s) | 1038, 2219, 2556, 2593 |
| MlsI | TGGCCA | 2 cut(s) | 495, 1272 |
| MluNI | TGGCCA | 2 cut(s) | 495, 1272 |
| MlyI | GAGTC | 4 cut(s) | 1098, 2380, 2408, 2776 |
| MmeI | TCCRAC | 3 cut(s) | 529, 574, 2728 |
| Mox20I | TGGCCA | 2 cut(s) | 495, 1272 |
| Mph1103I | ATGCAT | 1 cut(s) | 1440 |
| MroXI | GAANNNNTTC | 2 cut(s) | 556, 2019 |
| MscI | TGGCCA | 2 cut(s) | 495, 1272 |
| MslI | CAYNNNNRTG | 2 cut(s) | 794, 1527 |
| Msp20I | TGGCCA | 2 cut(s) | 495, 1272 |
| MspA1I | CMGCKG | 2 cut(s) | 422, 2327 |
| MspCI | CTTAAG | 2 cut(s) | 1241, 1988 |
| MspI | CCGG | 1 cut(s) | 2295 |
| MspR9I | CCNGG | 6 cut(s) | 930, 1274, 2295, 2657, 2744, 2799 |
| MunI | CAATTG | 1 cut(s) | 1976 |
| Mva1269I | GAATGC | 1 cut(s) | 1628 |
| MvaI | CCWGG | 5 cut(s) | 930, 1274, 2657, 2744, 2799 |
| MvnI | CGCG | 1 cut(s) | 2267 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 45, 54, 1139 |
| NciI | CCSGG | 1 cut(s) | 2295 |
| NlaIV | GGNNCC | 4 cut(s) | 181, 601, 817, 1646 |
| NmuCI | GTSAC | 3 cut(s) | 451, 1355, 1833 |
| NsiI | ATGCAT | 1 cut(s) | 1440 |
| NspI | RCATGY | 4 cut(s) | 525, 694, 708, 1541 |
| NspV | TTCGAA | 1 cut(s) | 715 |
| PaeI | GCATGC | 1 cut(s) | 525 |
| PagI | TCATGA | 1 cut(s) | 1522 |
| PasI | CCCWGGG | 1 cut(s) | 2798 |
| PciI | ACATGT | 3 cut(s) | 690, 704, 1537 |
| PctI | GAATGC | 1 cut(s) | 1628 |
| PdmI | GAANNNNTTC | 2 cut(s) | 556, 2019 |
| PflFI | GACNNNGTC | 1 cut(s) | 1331 |
| PfoI | TCCNGGA | 1 cut(s) | 928 |
| PkrI | GCNGC | 6 cut(s) | 17, 193, 424, 437, 2233, 2355 |
| Ple19I | CGATCG | 1 cut(s) | 398 |
| PleI | GAGTC | 4 cut(s) | 1097, 2380, 2408, 2775 |
| PpsI | GAGTC | 4 cut(s) | 1097, 2380, 2408, 2775 |
| Ppu21I | YACGTR | 2 cut(s) | 1160, 1475 |
| PscI | ACATGT | 3 cut(s) | 690, 704, 1537 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2788 |
| PsiI | TTATAA | 1 cut(s) | 947 |
| Psp124BI | GAGCTC | 2 cut(s) | 1038, 2556 |
| Psp1406I | AACGTT | 1 cut(s) | 473 |
| Psp6I | CCWGG | 5 cut(s) | 928, 1272, 2655, 2742, 2797 |
| PspFI | CCCAGC | 1 cut(s) | 2530 |
| PspGI | CCWGG | 5 cut(s) | 928, 1272, 2655, 2742, 2797 |
| PspN4I | GGNNCC | 4 cut(s) | 181, 601, 817, 1646 |
| PspPI | GGNCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 14, 46, 954, 986 |
| PstI | CTGCAG | 2 cut(s) | 427, 1746 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1601 |
| PsuI | RGATCY | 1 cut(s) | 599 |
| PsyI | GACNNNGTC | 1 cut(s) | 1331 |
| PvuI | CGATCG | 1 cut(s) | 398 |
| PvuII | CAGCTG | 1 cut(s) | 422 |
| RseI | CAYNNNNRTG | 2 cut(s) | 794, 1527 |
| SacI | GAGCTC | 2 cut(s) | 1038, 2556 |
| SatI | GCNGC | 6 cut(s) | 16, 192, 423, 436, 2232, 2354 |
| Sau96I | GGNCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| ScaI | AGTACT | 1 cut(s) | 2614 |
| SchI | GAGTC | 4 cut(s) | 1098, 2380, 2408, 2776 |
| ScrFI | CCNGG | 6 cut(s) | 930, 1274, 2295, 2657, 2744, 2799 |
| SduI | GDGCHC | 4 cut(s) | 1038, 2219, 2556, 2593 |
| SexAI | ACCWGGT | 1 cut(s) | 2742 |
| SfcI | CTRYAG | 5 cut(s) | 423, 971, 1143, 1742, 2252 |
| SfuI | TTCGAA | 1 cut(s) | 715 |
| SinI | GGWCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 794, 1527 |
| SmlI | CTYRAG | 8 cut(s) | 34, 236, 775, 1031, 1093, 1241, 1988, 2555 |
| SmoI | CTYRAG | 8 cut(s) | 34, 236, 775, 1031, 1093, 1241, 1988, 2555 |
| SnaBI | TACGTA | 1 cut(s) | 1160 |
| SpeI | ACTAGT | 1 cut(s) | 2671 |
| SphI | GCATGC | 1 cut(s) | 525 |
| SsiI | CCGC | 7 cut(s) | 218, 435, 639, 1642, 2066, 2325, 2354 |
| SspI | AATATT | 1 cut(s) | 1915 |
| SspMI | CTAG | 6 cut(s) | 135, 504, 644, 1418, 2165, 2672 |
| SstI | GAGCTC | 2 cut(s) | 1038, 2556 |
| StyD4I | CCNGG | 6 cut(s) | 928, 1272, 2293, 2655, 2742, 2797 |
| TaaI | ACNGT | 9 cut(s) | 83, 805, 881, 1331, 1361, 1411, 1691, 2500, 2567 |
| TaiI | ACGT | 6 cut(s) | 30, 476, 916, 1162, 1477, 1833 |
| TaqI | TCGA | 8 cut(s) | 174, 448, 715, 1396, 1450, 1826, 1932, 2770 |
| TaqII | GACCGA | 1 cut(s) | 833 |
| TatI | WGTACW | 4 cut(s) | 83, 1619, 1972, 2612 |
| TauI | GCSGC | 2 cut(s) | 438, 2356 |
| TscAI | CASTG | 6 cut(s) | 279, 1687, 1694, 2161, 2233, 2473 |
| TseFI | GTSAC | 3 cut(s) | 451, 1355, 1833 |
| TseI | GCWGC | 4 cut(s) | 15, 191, 422, 2231 |
| Tsp45I | GTSAC | 3 cut(s) | 451, 1355, 1833 |
| TspGWI | ACGGA | 4 cut(s) | 83, 1577, 1957, 2432 |
| TspRI | CASTG | 6 cut(s) | 279, 1687, 1694, 2161, 2233, 2473 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1331 |
| Vha464I | CTTAAG | 2 cut(s) | 1241, 1988 |
| VneI | GTGCAC | 2 cut(s) | 2215, 2589 |
| VpaK11BI | GGWCC | 6 cut(s) | 70, 180, 391, 816, 926, 1327 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2660 |
| XapI | RAATTY | 6 cut(s) | 624, 1227, 1236, 1675, 2047, 2098 |
| XbaI | TCTAGA | 1 cut(s) | 1417 |
| XceI | RCATGY | 4 cut(s) | 525, 694, 708, 1541 |
| XmiI | GTMKAC | 1 cut(s) | 5 |
| XmnI | GAANNNNTTC | 2 cut(s) | 556, 2019 |
| XspI | CTAG | 6 cut(s) | 135, 504, 644, 1418, 2165, 2672 |
| ZrmI | AGTACT | 1 cut(s) | 2614 |
| Zsp2I | ATGCAT | 1 cut(s) | 1440 |