pycom02g25790

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
23671507 .. 23675506
4000 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g25790.4

Sequence Viewer

Length: 1758 bp
ATGCCGAGTCCAGATGGTGTCTTGATGAGCTGGTCGAGATCGATCTTGGCCTGCAGAAGAACAGTGGGGCAAATGGTTTTGCCAATTTTCTATGACATCGATCCTTCCGATGTCAGGCATCAGAGGGGTGCTTTTGCGGAAGCATTCCGGGAACATCAAAAGCGCTTCCCTGAAATGGTGCAGACCTGGAAAGATGCTCTTAATGAAGCTGCAGAGTTGGCCGGCGAGGATTTTAGTGCGACTGATGGGTATAAAGGAAGGTTTGTCAGGAAAATTGTTGACGAGATCACCAGAAAACTGAAGAACACATACTTAGCCGTAGCCCCAAAACCAGTTGGAATAGATTCTCGCGTGCAAGAAATTGGTAAATATTTGGATGATGGAGGATTAGATGATGTCCGCATAATTGGAATTTGGGGTATGGGCGGACTAGGTAAAACAACGGTTGCCAAAGCCATTTTCAACAAATATAAGGGTATGTTTCAATGTGCAAGTTTTCTTGCTAATGTGAGAGAAGATAAGAAACTGGTTGAATCGCAAAACACACTTCTTTCTGATGTATTGAGATCGGGAAACATACAGGTTCGTAGAGCTGATGAAGGGACCGAGGATATAAAAAGAAGACTTCGCAGCCAAAAGGCACTTGTCATAATTGATGATGTAGACATCGTGGACCAGTTAGATGCATTAGCTATAGAACGTGACTCGTTTGGTCCAAGAAGTAGAATTGTCATAACAACAAGAAATGAACATTTGCTAAATATACTAAACGCAGATTGGAGATATCATCTACCAACAATGAATAAAGAAGAAGCTGTTGAGCTCCTTAGTTGGCGTGCCTTTGGTAAGAATTATCCTAATAAAGAATATGTTCAAGTTGCAAGCGATGTTGTTGATTACTGTGAGGGTTTGCCACTGGCACTTCAAGTTTTAGGTACTTATCTACATGCAAAAAGCGCAGATGAATGGAAAAGTGCACTGCGTAAATGGAAAAGATCGCGGCCTTGTTCGGCAATTCACGAAAGGCTTAAGATAAGCTATGATGGGCTAACCGATGGTGGTGTGAAGTCTATGTTCCTTGATATATCCTGTTTCTTTATTGGAATGAAGAAGGACTATGTCATGAAAATACTGGATCCAGATGACTGGTATGCCTCAATAGGAATTAGGGAACTGCATGACCAATGCCTTGTAACTGTTGATACAGAAGGCAATCTGATGATGCATAGTTTGATTCGAGACACTGGCAGAGAAATTGTACGGAAAAAATCCCCAGACATCGTACGAAAGCGTTGTAGATTATGGGATCATGAAGATGTAAAATCCGTATTGAGGAGCAAAACTGGAGGTGAAGAAATTCAAGGACTGGCTTTAAATTTGTCAGAACGTCACAAGCCTTTCAGTACAGAAGCATTTAGAGCGATGCACGGATTGAGATTACTCAAACTCAAAGGGGTAATGTTCACTGGACAATGCGAACACTTTTCCGAAGAGTTAAGATGGTTGTGTTGGCCTGAGTGTCCTGTGGAGGTCATACCCGGCCATTTTAATCAAACAAACCTAGTTGATATCGACCTGAGTCATAGCAACATACGAGCTTGGGAGGACTCCGACGAGCCACTTGAGAAGTTGAAGTTTCTTAATCTTGGTTATTGCAAGCACCTGGAACGATCGCCAGACTTTTCAAATATCCCAAATCTTGAGAGATTGATACTTGAAGGCTGTACGATTTTGTCCGAGATTCACTCTGTAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

586

Amino Acids

66.83

Weight (kDa)

6.62

Isoelectric Point (pI)

46.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 663
AccII CGCG 2 cut(s) 351, 1000
AciI CCGC 4 cut(s) 137, 400, 426, 1000
AclWI GGATC 4 cut(s) 95, 1130, 1143, 1314
AcoI YGGCCR 2 cut(s) 219, 1540
AcsI RAATTY 3 cut(s) 411, 1356, 1375
AcuI CTGAAG 1 cut(s) 320
AfaI GTAC 5 cut(s) 937, 1260, 1284, 1405, 1726
AfeI AGCGCT 1 cut(s) 164
AfiI CCNNNNNNNGG 3 cut(s) 114, 175, 1332
AflII CTTAAG 1 cut(s) 1028
AgsI TTSAA 9 cut(s) 463, 485, 533, 875, 926, 1361, 1633, 1686, 1718
AjnI CCWGG 2 cut(s) 185, 1662
AjuI GAANNNNNNNTTGG 2 cut(s) 443, 475
AluBI AGCT 8 cut(s) 30, 209, 593, 692, 815, 823, 1038, 1598
AluI AGCT 8 cut(s) 30, 209, 593, 692, 815, 823, 1038, 1598
Alw21I GWGCWC 2 cut(s) 825, 979
Alw26I GTCTC 1 cut(s) 1233
Alw44I GTGCAC 1 cut(s) 975
AlwI GGATC 4 cut(s) 95, 1130, 1143, 1314
Aor51HI AGCGCT 1 cut(s) 164
AoxI GGCC 5 cut(s) 48, 219, 1001, 1511, 1540
ApaLI GTGCAC 1 cut(s) 975
ApeKI GCWGC 2 cut(s) 209, 630
ApoI RAATTY 3 cut(s) 411, 1356, 1375
Asp700I GAANNNNTTC 3 cut(s) 343, 870, 1356
AspLEI GCGC 2 cut(s) 165, 959
AspS9I GGNCC 3 cut(s) 603, 673, 713
AsuC2I CCSGG 2 cut(s) 149, 1539
AsuHPI GGTGA 2 cut(s) 280, 1361
AvaII GGWCC 3 cut(s) 603, 673, 713
BaeGI GKGCMC 1 cut(s) 979
BamHI GGATCC 1 cut(s) 1135
BanII GRGCYC 1 cut(s) 825
BarI GAAGNNNNNNTAC 2 cut(s) 293, 325
BbsI GAAGAC 1 cut(s) 628
Bbv12I GWGCWC 2 cut(s) 825, 979
BbvI GCAGC 2 cut(s) 196, 642
BccI CCATC 6 cut(s) 8, 239, 374, 1037, 1049, 1494
BceAI ACGGC 1 cut(s) 302
BciT130I CCWGG 2 cut(s) 187, 1664
BcnI CCSGG 2 cut(s) 149, 1539
BcoDI GTCTC 1 cut(s) 1233
BfaI CTAG 2 cut(s) 431, 1562
BfmI CTRYAG 4 cut(s) 52, 210, 693, 1749
BfoI RGCGCY 1 cut(s) 166
BfrI CTTAAG 1 cut(s) 1028
BisI GCNGC 3 cut(s) 210, 631, 1001
BlsI GCNGC 3 cut(s) 211, 632, 1002
Bme1390I CCNGG 4 cut(s) 149, 187, 1539, 1664
Bme18I GGWCC 3 cut(s) 603, 673, 713
BmgT120I GGNCC 3 cut(s) 603, 673, 713
BmiI GGNNCC 2 cut(s) 604, 1137
BmrFI CCNGG 4 cut(s) 149, 187, 1539, 1664
BmsI GCATC 5 cut(s) 127, 184, 673, 1212, 1413
BoxI GACNNNNGTC 1 cut(s) 1578
BpiI GAAGAC 1 cut(s) 628
BplI GAGNNNNNCTC 1 cut(s) 1730
BpmI CTGGAG 1 cut(s) 1365
BpuEI CTTGAG 2 cut(s) 1643, 1721
BpuMI CCSGG 2 cut(s) 149, 1539
Bsa29I ATCGAT 2 cut(s) 41, 99
BsaJI CCNNGG 1 cut(s) 606
Bsc4I CCNNNNNNNGG 3 cut(s) 114, 175, 1332
Bse118I RCCGGY 1 cut(s) 221
BseBI CCWGG 2 cut(s) 187, 1664
BseCI ATCGAT 2 cut(s) 41, 99
BseDI CCNNGG 1 cut(s) 606
BseGI GGATG 1 cut(s) 382
BseLI CCNNNNNNNGG 3 cut(s) 114, 175, 1332
BseMII CTCAG 2 cut(s) 1506, 1568
BseRI GAGGAG 1 cut(s) 1348
BseSI GKGCMC 1 cut(s) 979
BseXI GCAGC 2 cut(s) 196, 642
BsgI GTGCAG 1 cut(s) 200
Bsh1236I CGCG 2 cut(s) 351, 1000
Bsh1285I CGRYCG 1 cut(s) 1673
BshFI GGCC 5 cut(s) 50, 221, 1003, 1513, 1542
BshVI ATCGAT 2 cut(s) 41, 99
BsiEI CGRYCG 1 cut(s) 1673
BsiHKAI GWGCWC 2 cut(s) 825, 979
BsiSI CCGG 3 cut(s) 148, 222, 1539
BsiWI CGTACG 1 cut(s) 1282
BslFI GGGAC 1 cut(s) 616
BslI CCNNNNNNNGG 3 cut(s) 114, 175, 1332
BsmAI GTCTC 1 cut(s) 1233
BsmFI GGGAC 1 cut(s) 616
BsmI GAATGC 1 cut(s) 143
BsnI GGCC 5 cut(s) 50, 221, 1003, 1513, 1542
Bsp1286I GDGCHC 2 cut(s) 825, 979
Bsp143I GATC 9 cut(s) 38, 42, 100, 285, 566, 995, 1135, 1306, 1670
BspACI CCGC 4 cut(s) 137, 400, 426, 1000
BspANI GGCC 5 cut(s) 50, 221, 1003, 1513, 1542
BspCNI CTCAG 2 cut(s) 1507, 1569
BspDI ATCGAT 2 cut(s) 41, 99
BspFNI CGCG 2 cut(s) 351, 1000
BspHI TCATGA 2 cut(s) 1122, 1309
BspLI GGNNCC 2 cut(s) 604, 1137
BspMAI CTGCAG 2 cut(s) 56, 214
BspPI GGATC 4 cut(s) 95, 1130, 1143, 1314
BspTI CTTAAG 1 cut(s) 1028
BsrFI RCCGGY 1 cut(s) 221
BssAI RCCGGY 1 cut(s) 221
BssECI CCNNGG 1 cut(s) 606
BssMI GATC 9 cut(s) 38, 42, 100, 285, 566, 995, 1135, 1306, 1670
Bst2UI CCWGG 2 cut(s) 187, 1664
Bst4CI ACNGT 4 cut(s) 64, 445, 902, 1198
Bst6I CTCTTC 1 cut(s) 1485
BstAFI CTTAAG 1 cut(s) 1028
BstC8I GCNNGC 6 cut(s) 52, 223, 353, 837, 883, 1658
BstDEI CTNAG 4 cut(s) 313, 827, 1515, 1577
BstF5I GGATG 1 cut(s) 382
BstFNI CGCG 2 cut(s) 351, 1000
BstH2I RGCGCY 1 cut(s) 166
BstHHI GCGC 2 cut(s) 165, 959
BstKTI GATC 9 cut(s) 41, 45, 103, 288, 569, 998, 1138, 1309, 1673
BstMAI GTCTC 1 cut(s) 1233
BstMBI GATC 9 cut(s) 38, 42, 100, 285, 566, 995, 1135, 1306, 1670
BstMCI CGRYCG 1 cut(s) 1673
BstMWI GCNNNNNNNGC 3 cut(s) 218, 956, 1418
BstNI CCWGG 2 cut(s) 187, 1664
BstNSI RCATGY 1 cut(s) 950
BstPAI GACNNNNGTC 1 cut(s) 1578
BstSCI CCNGG 4 cut(s) 147, 185, 1537, 1662
BstSFI CTRYAG 4 cut(s) 52, 210, 693, 1749
BstSLI GKGCMC 1 cut(s) 979
BstUI CGCG 2 cut(s) 351, 1000
BstV1I GCAGC 2 cut(s) 196, 642
BstV2I GAAGAC 1 cut(s) 628
BstX2I RGATCY 1 cut(s) 1135
BstXI CCANNNNNNTGG 1 cut(s) 1146
BstYI RGATCY 1 cut(s) 1135
Bsu15I ATCGAT 2 cut(s) 41, 99
BsuRI GGCC 5 cut(s) 50, 221, 1003, 1513, 1542
BsuTUI ATCGAT 2 cut(s) 41, 99
BtgZI GCGATG 2 cut(s) 900, 1436
BtsCI GGATG 1 cut(s) 382
BtsI GCAGTG 1 cut(s) 977
BtsIMutI CAGTG 5 cut(s) 69, 914, 977, 1242, 1464
Cac8I GCNNGC 6 cut(s) 52, 223, 353, 837, 883, 1658
CciI TCATGA 2 cut(s) 1122, 1309
CfoI GCGC 2 cut(s) 165, 959
Cfr10I RCCGGY 1 cut(s) 221
Cfr13I GGNCC 3 cut(s) 603, 673, 713
ClaI ATCGAT 2 cut(s) 41, 99
Csp6I GTAC 5 cut(s) 936, 1259, 1283, 1404, 1725
CviAII CATG 4 cut(s) 947, 1123, 1178, 1310
CviQI GTAC 5 cut(s) 936, 1259, 1283, 1404, 1725
DdeI CTNAG 4 cut(s) 313, 827, 1515, 1577
DpnI GATC 9 cut(s) 40, 44, 102, 287, 568, 997, 1137, 1308, 1672
DpnII GATC 9 cut(s) 38, 42, 100, 285, 566, 995, 1135, 1306, 1670
DraI TTTAAA 1 cut(s) 1374
EaeI YGGCCR 2 cut(s) 219, 1540
Eam1104I CTCTTC 1 cut(s) 1485
EarI CTCTTC 1 cut(s) 1485
EciI GGCGGA 1 cut(s) 441
Ecl136II GAGCTC 1 cut(s) 823
Eco24I GRGCYC 1 cut(s) 825
Eco32I GATATC 2 cut(s) 785, 1570
Eco47I GGWCC 3 cut(s) 603, 673, 713
Eco47III AGCGCT 1 cut(s) 164
Eco53kI GAGCTC 1 cut(s) 823
Eco57I CTGAAG 1 cut(s) 320
EcoICRI GAGCTC 1 cut(s) 823
EcoRII CCWGG 2 cut(s) 185, 1662
EcoRV GATATC 2 cut(s) 785, 1570
EcoT22I ATGCAT 2 cut(s) 688, 1227
EcoT38I GRGCYC 1 cut(s) 825
FaeI CATG 4 cut(s) 950, 1126, 1181, 1313
FalI AAGNNNNNCTT 2 cut(s) 183, 215
FaqI GGGAC 1 cut(s) 616
FatI CATG 4 cut(s) 946, 1122, 1177, 1309
FblI GTMKAC 1 cut(s) 663
Fnu4HI GCNGC 3 cut(s) 210, 631, 1001
FokI GGATG 1 cut(s) 389
FriOI GRGCYC 1 cut(s) 825
Fsp4HI GCNGC 3 cut(s) 210, 631, 1001
FspBI CTAG 2 cut(s) 431, 1562
GlaI GCGC 2 cut(s) 164, 958
GluI GCNGC 3 cut(s) 210, 631, 1001
GsuI CTGGAG 1 cut(s) 1365
HaeII RGCGCY 1 cut(s) 166
HaeIII GGCC 5 cut(s) 50, 221, 1003, 1513, 1542
HapII CCGG 3 cut(s) 148, 222, 1539
HhaI GCGC 2 cut(s) 165, 959
Hin1II CATG 4 cut(s) 950, 1126, 1181, 1313
Hin6I GCGC 2 cut(s) 163, 957
HinP1I GCGC 2 cut(s) 163, 957
HincII GTYRAC 1 cut(s) 280
HindII GTYRAC 1 cut(s) 280
HinfI GANTC 8 cut(s) 7, 344, 533, 704, 1234, 1579, 1607, 1741
HpaII CCGG 3 cut(s) 148, 222, 1539
HphI GGTGA 2 cut(s) 280, 1361
Hpy166II GTNNAC 5 cut(s) 280, 664, 673, 977, 1464
Hpy188I TCNGA 8 cut(s) 109, 123, 556, 1218, 1384, 1489, 1612, 1738
Hpy8I GTNNAC 5 cut(s) 280, 664, 673, 977, 1464
Hpy99I CGWCG 1 cut(s) 1616
HpyAV CCTTC 6 cut(s) 114, 252, 593, 1105, 1202, 1712
HpyCH4III ACNGT 4 cut(s) 64, 445, 902, 1198
HpyCH4IV ACGT 2 cut(s) 700, 1387
HpyF10VI GCNNNNNNNGC 3 cut(s) 218, 956, 1418
HpyF3I CTNAG 4 cut(s) 313, 827, 1515, 1577
HpySE526I ACGT 2 cut(s) 700, 1387
Hsp92II CATG 4 cut(s) 950, 1126, 1181, 1313
HspAI GCGC 2 cut(s) 163, 957
KroI GCCGGC 1 cut(s) 221
KroNI GCCGGC 1 cut(s) 223
Kzo9I GATC 9 cut(s) 38, 42, 100, 285, 566, 995, 1135, 1306, 1670
LmnI GCTCC 2 cut(s) 828, 1335
Lsp1109I GCAGC 2 cut(s) 196, 642
LweI GCATC 5 cut(s) 127, 184, 673, 1212, 1413
MaeI CTAG 2 cut(s) 431, 1562
MaeII ACGT 2 cut(s) 700, 1387
MaeIII GTNAC 3 cut(s) 701, 1192, 1388
MalI GATC 9 cut(s) 40, 44, 102, 287, 568, 997, 1137, 1308, 1672
MboI GATC 9 cut(s) 38, 42, 100, 285, 566, 995, 1135, 1306, 1670
MboII GAAGA 9 cut(s) 69, 313, 527, 633, 821, 1120, 1325, 1364, 1502
MflI RGATCY 1 cut(s) 1135
MhlI GDGCHC 2 cut(s) 825, 979
MlyI GAGTC 4 cut(s) 16, 698, 1588, 1601
MmeI TCCRAC 2 cut(s) 316, 1635
Mph1103I ATGCAT 2 cut(s) 688, 1227
MroNI GCCGGC 1 cut(s) 221
MroXI GAANNNNTTC 3 cut(s) 343, 870, 1356
MseI TTAA 6 cut(s) 201, 1029, 1373, 1496, 1548, 1641
MslI CAYNNNNRTG 1 cut(s) 1314
MspCI CTTAAG 1 cut(s) 1028
MspI CCGG 3 cut(s) 148, 222, 1539
MspR9I CCNGG 4 cut(s) 149, 187, 1539, 1664
Mva1269I GAATGC 1 cut(s) 143
MvaI CCWGG 2 cut(s) 187, 1664
MvnI CGCG 2 cut(s) 351, 1000
MwoI GCNNNNNNNGC 3 cut(s) 218, 956, 1418
NaeI GCCGGC 1 cut(s) 223
NciI CCSGG 2 cut(s) 149, 1539
NdeII GATC 9 cut(s) 38, 42, 100, 285, 566, 995, 1135, 1306, 1670
NgoMIV GCCGGC 1 cut(s) 221
NlaIII CATG 4 cut(s) 950, 1126, 1181, 1313
NlaIV GGNNCC 2 cut(s) 604, 1137
NmeAIII GCCGAG 1 cut(s) 30
NmuCI GTSAC 2 cut(s) 701, 1388
NsiI ATGCAT 2 cut(s) 688, 1227
NspI RCATGY 1 cut(s) 950
PagI TCATGA 2 cut(s) 1122, 1309
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PctI GAATGC 1 cut(s) 143
PdiI GCCGGC 1 cut(s) 223
PdmI GAANNNNTTC 3 cut(s) 343, 870, 1356
PfeI GAWTC 4 cut(s) 344, 533, 1234, 1741
Pfl23II CGTACG 1 cut(s) 1282
PflFI GACNNNGTC 1 cut(s) 1118
PfoI TCCNGGA 1 cut(s) 147
PkrI GCNGC 3 cut(s) 211, 632, 1002
Ple19I CGATCG 1 cut(s) 1673
PleI GAGTC 4 cut(s) 15, 698, 1587, 1601
PpsI GAGTC 4 cut(s) 15, 698, 1587, 1601
PshAI GACNNNNGTC 1 cut(s) 1578
Psp124BI GAGCTC 1 cut(s) 825
Psp6I CCWGG 2 cut(s) 185, 1662
PspGI CCWGG 2 cut(s) 185, 1662
PspLI CGTACG 1 cut(s) 1282
PspN4I GGNNCC 2 cut(s) 604, 1137
PspPI GGNCC 3 cut(s) 603, 673, 713
PstI CTGCAG 2 cut(s) 56, 214
PsuI RGATCY 1 cut(s) 1135
PsyI GACNNNGTC 1 cut(s) 1118
PvuI CGATCG 1 cut(s) 1673
RsaI GTAC 5 cut(s) 937, 1260, 1284, 1405, 1726
RsaNI GTAC 5 cut(s) 936, 1259, 1283, 1404, 1725
RseI CAYNNNNRTG 1 cut(s) 1314
SacI GAGCTC 1 cut(s) 825
SaqAI TTAA 6 cut(s) 201, 1029, 1373, 1496, 1548, 1641
SatI GCNGC 3 cut(s) 210, 631, 1001
Sau3AI GATC 9 cut(s) 38, 42, 100, 285, 566, 995, 1135, 1306, 1670
Sau96I GGNCC 3 cut(s) 603, 673, 713
SchI GAGTC 4 cut(s) 16, 698, 1588, 1601
ScrFI CCNGG 4 cut(s) 149, 187, 1539, 1664
SduI GDGCHC 2 cut(s) 825, 979
SfaNI GCATC 5 cut(s) 127, 184, 673, 1212, 1413
SfcI CTRYAG 4 cut(s) 52, 210, 693, 1749
SinI GGWCC 3 cut(s) 603, 673, 713
SmiMI CAYNNNNRTG 1 cut(s) 1314
SmlI CTYRAG 3 cut(s) 1028, 1622, 1700
SmoI CTYRAG 3 cut(s) 1028, 1622, 1700
SsiI CCGC 4 cut(s) 137, 400, 426, 1000
SspI AATATT 1 cut(s) 371
SspMI CTAG 2 cut(s) 431, 1562
SstI GAGCTC 1 cut(s) 825
StyD4I CCNGG 4 cut(s) 147, 185, 1537, 1662
TaaI ACNGT 4 cut(s) 64, 445, 902, 1198
TaiI ACGT 2 cut(s) 703, 1390
TaqI TCGA 5 cut(s) 35, 41, 99, 1237, 1572
TaqII GACCGA 1 cut(s) 620
TatI WGTACW 1 cut(s) 1403
TauI GCSGC 1 cut(s) 1003
TfiI GAWTC 4 cut(s) 344, 533, 1234, 1741
Tru1I TTAA 6 cut(s) 201, 1029, 1373, 1496, 1548, 1641
Tru9I TTAA 6 cut(s) 201, 1029, 1373, 1496, 1548, 1641
TscAI CASTG 5 cut(s) 69, 921, 984, 1249, 1471
TseFI GTSAC 2 cut(s) 701, 1388
TseI GCWGC 2 cut(s) 209, 630
Tsp45I GTSAC 2 cut(s) 701, 1388
TspDTI ATGAA 8 cut(s) 219, 612, 762, 815, 978, 1121, 1139, 1326
TspGWI ACGGA 3 cut(s) 1276, 1315, 1443
TspRI CASTG 5 cut(s) 69, 921, 984, 1249, 1471
Tth111I GACNNNGTC 1 cut(s) 1118
Vha464I CTTAAG 1 cut(s) 1028
VneI GTGCAC 1 cut(s) 975
VpaK11BI GGWCC 3 cut(s) 603, 673, 713
XapI RAATTY 3 cut(s) 411, 1356, 1375
XceI RCATGY 1 cut(s) 950
XmiI GTMKAC 1 cut(s) 663
XmnI GAANNNNTTC 3 cut(s) 343, 870, 1356
XspI CTAG 2 cut(s) 431, 1562
Zsp2I ATGCAT 2 cut(s) 688, 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.