TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 500 |
| AatII | GACGTC | 1 cut(s) | 522 |
| Acc16I | TGCGCA | 1 cut(s) | 106 |
| Acc36I | ACCTGC | 1 cut(s) | 2413 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1897 |
| AccII | CGCG | 3 cut(s) | 76, 239, 2464 |
| AclWI | GGATC | 6 cut(s) | 215, 326, 628, 670, 1545, 2067 |
| AcsI | RAATTY | 5 cut(s) | 448, 506, 645, 1100, 1245 |
| AcuI | CTGAAG | 4 cut(s) | 43, 423, 2018, 2165 |
| AcyI | GRCGYC | 2 cut(s) | 123, 519 |
| AfaI | GTAC | 9 cut(s) | 236, 295, 820, 873, 1183, 1491, 1639, 1992, 2278 |
| AfeI | AGCGCT | 1 cut(s) | 395 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1391, 1897, 2355 |
| AflII | CTTAAG | 1 cut(s) | 2006 |
| AflIII | ACRYGT | 3 cut(s) | 45, 340, 2462 |
| AhlI | ACTAGT | 1 cut(s) | 565 |
| AjiI | CACGTC | 2 cut(s) | 46, 1849 |
| AjnI | CCWGG | 4 cut(s) | 946, 1341, 1794, 2323 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 840, 872, 1380, 1412, 1816, 1848 |
| Alw21I | GWGCWC | 3 cut(s) | 2237, 2378, 2462 |
| Alw26I | GTCTC | 5 cut(s) | 168, 969, 1464, 1657, 1955 |
| Alw44I | GTGCAC | 3 cut(s) | 2233, 2374, 2458 |
| AlwI | GGATC | 6 cut(s) | 215, 326, 628, 670, 1545, 2067 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1666 |
| Ama87I | CYCGRG | 1 cut(s) | 1934 |
| Aor51HI | AGCGCT | 1 cut(s) | 395 |
| AoxI | GGCC | 2 cut(s) | 1745, 2134 |
| ApaLI | GTGCAC | 3 cut(s) | 2233, 2374, 2458 |
| ApeKI | GCWGC | 3 cut(s) | 5, 861, 1852 |
| ApoI | RAATTY | 5 cut(s) | 448, 506, 645, 1100, 1245 |
| AseI | ATTAAT | 1 cut(s) | 1028 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 577 |
| AspLEI | GCGC | 2 cut(s) | 107, 396 |
| AspS9I | GGNCC | 3 cut(s) | 81, 834, 944 |
| AsuC2I | CCSGG | 2 cut(s) | 1972, 2350 |
| AsuHPI | GGTGA | 5 cut(s) | 79, 1118, 1899, 1970, 2436 |
| AvaI | CYCGRG | 1 cut(s) | 1934 |
| AvaII | GGWCC | 3 cut(s) | 81, 834, 944 |
| BaeGI | GKGCMC | 3 cut(s) | 2237, 2378, 2462 |
| BauI | CACGAG | 3 cut(s) | 582, 1292, 2455 |
| BbsI | GAAGAC | 4 cut(s) | 124, 214, 535, 1525 |
| Bbv12I | GWGCWC | 3 cut(s) | 2237, 2378, 2462 |
| BbvCI | CCTCAGC | 1 cut(s) | 416 |
| BbvI | GCAGC | 3 cut(s) | 17, 873, 1839 |
| BccI | CCATC | 5 cut(s) | 243, 1268, 1361, 1728, 1899 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1468, 1502, 2269, 2303 |
| BciT130I | CCWGG | 4 cut(s) | 948, 1343, 1796, 2325 |
| BciVI | GTATCC | 1 cut(s) | 2326 |
| BclI | TGATCA | 2 cut(s) | 273, 594 |
| BcnI | CCSGG | 2 cut(s) | 1972, 2350 |
| BcoDI | GTCTC | 5 cut(s) | 168, 969, 1464, 1657, 1955 |
| BcuI | ACTAGT | 1 cut(s) | 565 |
| BfaI | CTAG | 7 cut(s) | 204, 525, 566, 1097, 1116, 1151, 2090 |
| BfoI | RGCGCY | 1 cut(s) | 397 |
| BfrI | CTTAAG | 1 cut(s) | 2006 |
| BfuAI | ACCTGC | 1 cut(s) | 2413 |
| BfuI | GTATCC | 1 cut(s) | 2326 |
| BglII | AGATCT | 2 cut(s) | 425, 2092 |
| BisI | GCNGC | 6 cut(s) | 6, 77, 213, 558, 862, 1853 |
| BlsI | GCNGC | 6 cut(s) | 7, 78, 214, 559, 863, 1854 |
| BmcAI | AGTACT | 1 cut(s) | 820 |
| Bme1390I | CCNGG | 6 cut(s) | 948, 1343, 1796, 1972, 2325, 2350 |
| Bme18I | GGWCC | 3 cut(s) | 81, 834, 944 |
| BmeT110I | CYCGRG | 1 cut(s) | 1934 |
| BmgBI | CACGTC | 2 cut(s) | 46, 1849 |
| BmgT120I | GGNCC | 3 cut(s) | 81, 834, 944 |
| BmiI | GGNNCC | 2 cut(s) | 835, 1383 |
| BmrFI | CCNGG | 6 cut(s) | 948, 1343, 1796, 1972, 2325, 2350 |
| BpiI | GAAGAC | 4 cut(s) | 124, 214, 535, 1525 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1072, 1104 |
| BpmI | CTGGAG | 1 cut(s) | 287 |
| Bpu10I | CCTNAGC | 2 cut(s) | 53, 416 |
| BpuEI | CTTGAG | 5 cut(s) | 278, 423, 1070, 1178, 1877 |
| BpuMI | CCSGG | 2 cut(s) | 1972, 2350 |
| Bsa29I | ATCGAT | 2 cut(s) | 1414, 1806 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1806 |
| BsaHI | GRCGYC | 2 cut(s) | 123, 519 |
| BsaJI | CCNNGG | 2 cut(s) | 837, 947 |
| BsaWI | WCCGGW | 1 cut(s) | 1909 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1391, 1897, 2355 |
| Bse1I | ACTGG | 5 cut(s) | 361, 1519, 1705, 1902, 2247 |
| Bse3DI | GCAATG | 2 cut(s) | 1211, 2110 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1806 |
| BseBI | CCWGG | 4 cut(s) | 948, 1343, 1796, 2325 |
| BseCI | ATCGAT | 2 cut(s) | 1414, 1806 |
| BseDI | CCNNGG | 2 cut(s) | 837, 947 |
| BseGI | GGATG | 4 cut(s) | 631, 1372, 1549, 2233 |
| BseJI | GATNNNNATC | 1 cut(s) | 1806 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1391, 1897, 2355 |
| BseMI | GCAATG | 2 cut(s) | 1211, 2110 |
| BseMII | CTCAG | 8 cut(s) | 44, 240, 407, 1068, 1740, 1802, 2143, 2307 |
| BseNI | ACTGG | 5 cut(s) | 361, 1519, 1705, 1902, 2247 |
| BseRI | GAGGAG | 1 cut(s) | 275 |
| BseSI | GKGCMC | 3 cut(s) | 2237, 2378, 2462 |
| BseXI | GCAGC | 3 cut(s) | 17, 873, 1839 |
| BsgI | GTGCAG | 1 cut(s) | 2223 |
| Bsh1236I | CGCG | 3 cut(s) | 76, 239, 2464 |
| BshFI | GGCC | 2 cut(s) | 1747, 2136 |
| BshVI | ATCGAT | 2 cut(s) | 1414, 1806 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2237, 2378, 2462 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1934 |
| BsiSI | CCGG | 3 cut(s) | 1910, 1971, 2349 |
| BsiWI | CGTACG | 1 cut(s) | 1489 |
| BslFI | GGGAC | 1 cut(s) | 847 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1391, 1897, 2355 |
| BsmAI | GTCTC | 5 cut(s) | 168, 969, 1464, 1657, 1955 |
| BsmBI | CGTCTC | 1 cut(s) | 168 |
| BsmFI | GGGAC | 1 cut(s) | 847 |
| BsnI | GGCC | 2 cut(s) | 1747, 2136 |
| BsoBI | CYCGRG | 1 cut(s) | 1934 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2237, 2378, 2462 |
| Bsp1407I | TGTACA | 2 cut(s) | 1181, 1637 |
| BspANI | GGCC | 2 cut(s) | 1747, 2136 |
| BspCNI | CTCAG | 8 cut(s) | 45, 239, 408, 1069, 1741, 1803, 2142, 2308 |
| BspDI | ATCGAT | 2 cut(s) | 1414, 1806 |
| BspFNI | CGCG | 3 cut(s) | 76, 239, 2464 |
| BspHI | TCATGA | 1 cut(s) | 1353 |
| BspLI | GGNNCC | 2 cut(s) | 835, 1383 |
| BspMI | ACCTGC | 1 cut(s) | 2413 |
| BspPI | GGATC | 6 cut(s) | 215, 326, 628, 670, 1545, 2067 |
| BspQI | GCTCTTC | 1 cut(s) | 384 |
| BspTI | CTTAAG | 1 cut(s) | 2006 |
| BsrDI | GCAATG | 2 cut(s) | 1211, 2110 |
| BsrGI | TGTACA | 2 cut(s) | 1181, 1637 |
| BsrI | ACTGG | 5 cut(s) | 361, 1519, 1705, 1902, 2247 |
| BssECI | CCNNGG | 2 cut(s) | 837, 947 |
| BssNI | GRCGYC | 2 cut(s) | 123, 519 |
| BssSI | CACGAG | 3 cut(s) | 582, 1292, 2455 |
| BssT1I | CCWWGG | 1 cut(s) | 837 |
| Bst2BI | CACGAG | 3 cut(s) | 582, 1292, 2455 |
| Bst2UI | CCWGG | 4 cut(s) | 948, 1343, 1796, 2325 |
| Bst6I | CTCTTC | 4 cut(s) | 28, 384, 597, 744 |
| BstACI | GRCGYC | 2 cut(s) | 123, 519 |
| BstAFI | CTTAAG | 1 cut(s) | 2006 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1462, 1666 |
| BstAUI | TGTACA | 2 cut(s) | 1181, 1637 |
| BstC8I | GCNNGC | 2 cut(s) | 1745, 2462 |
| BstF5I | GGATG | 4 cut(s) | 631, 1372, 1549, 2233 |
| BstFNI | CGCG | 3 cut(s) | 76, 239, 2464 |
| BstH2I | RGCGCY | 1 cut(s) | 397 |
| BstHHI | GCGC | 2 cut(s) | 107, 396 |
| BstMAI | GTCTC | 5 cut(s) | 168, 969, 1464, 1657, 1955 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 14, 63, 102, 1462, 1666 |
| BstNI | CCWGG | 4 cut(s) | 948, 1343, 1796, 2325 |
| BstNSI | RCATGY | 1 cut(s) | 344 |
| BstSCI | CCNGG | 6 cut(s) | 946, 1341, 1794, 1970, 2323, 2348 |
| BstSLI | GKGCMC | 3 cut(s) | 2237, 2378, 2462 |
| BstUI | CGCG | 3 cut(s) | 76, 239, 2464 |
| BstV1I | GCAGC | 3 cut(s) | 17, 873, 1839 |
| BstV2I | GAAGAC | 4 cut(s) | 124, 214, 535, 1525 |
| BstX2I | RGATCY | 3 cut(s) | 425, 2059, 2092 |
| BstYI | RGATCY | 3 cut(s) | 425, 2059, 2092 |
| Bsu15I | ATCGAT | 2 cut(s) | 1414, 1806 |
| BsuI | GTATCC | 1 cut(s) | 2326 |
| BsuRI | GGCC | 2 cut(s) | 1747, 2136 |
| BsuTUI | ATCGAT | 2 cut(s) | 1414, 1806 |
| BtrI | CACGTC | 2 cut(s) | 46, 1849 |
| BtsCI | GGATG | 4 cut(s) | 631, 1372, 1549, 2233 |
| BtsI | GCAGTG | 2 cut(s) | 2235, 2299 |
| BtsIMutI | CAGTG | 7 cut(s) | 1512, 1698, 2137, 2235, 2240, 2299, 2313 |
| BveI | ACCTGC | 1 cut(s) | 2413 |
| Cac8I | GCNNGC | 2 cut(s) | 1745, 2462 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1666 |
| CciI | TCATGA | 1 cut(s) | 1353 |
| CfoI | GCGC | 2 cut(s) | 107, 396 |
| Cfr13I | GGNCC | 3 cut(s) | 81, 834, 944 |
| ClaI | ATCGAT | 2 cut(s) | 1414, 1806 |
| CseI | GACGC | 1 cut(s) | 112 |
| CsiI | ACCWGGT | 1 cut(s) | 1794 |
| Csp6I | GTAC | 9 cut(s) | 235, 294, 819, 872, 1182, 1490, 1638, 1991, 2277 |
| CviAII | CATG | 9 cut(s) | 41, 277, 341, 386, 1067, 1354, 1457, 1474, 1600 |
| CviQI | GTAC | 9 cut(s) | 235, 294, 819, 872, 1182, 1490, 1638, 1991, 2277 |
| DraI | TTTAAA | 1 cut(s) | 1761 |
| Eam1104I | CTCTTC | 4 cut(s) | 28, 384, 597, 744 |
| EarI | CTCTTC | 4 cut(s) | 28, 384, 597, 744 |
| EciI | GGCGGA | 1 cut(s) | 94 |
| Eco130I | CCWWGG | 1 cut(s) | 837 |
| Eco32I | GATATC | 1 cut(s) | 1804 |
| Eco47I | GGWCC | 3 cut(s) | 81, 834, 944 |
| Eco47III | AGCGCT | 1 cut(s) | 395 |
| Eco57I | CTGAAG | 4 cut(s) | 43, 423, 2018, 2165 |
| Eco88I | CYCGRG | 1 cut(s) | 1934 |
| EcoRII | CCWGG | 4 cut(s) | 946, 1341, 1794, 2323 |
| EcoRV | GATATC | 1 cut(s) | 1804 |
| EcoT14I | CCWWGG | 1 cut(s) | 837 |
| EcoT22I | ATGCAT | 2 cut(s) | 1458, 2474 |
| ErhI | CCWWGG | 1 cut(s) | 837 |
| Esp3I | CGTCTC | 1 cut(s) | 168 |
| FaeI | CATG | 9 cut(s) | 44, 280, 344, 389, 1070, 1357, 1460, 1477, 1603 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 840, 872, 1032, 1064, 1616, 1648 |
| FaqI | GGGAC | 1 cut(s) | 847 |
| FatI | CATG | 9 cut(s) | 40, 276, 340, 385, 1066, 1353, 1456, 1473, 1599 |
| FauI | CCCGC | 1 cut(s) | 2427 |
| FbaI | TGATCA | 2 cut(s) | 273, 594 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 77, 213, 558, 862, 1853 |
| FokI | GGATG | 4 cut(s) | 638, 1379, 1556, 2240 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 77, 213, 558, 862, 1853 |
| FspBI | CTAG | 7 cut(s) | 204, 525, 566, 1097, 1116, 1151, 2090 |
| FspI | TGCGCA | 1 cut(s) | 106 |
| GlaI | GCGC | 2 cut(s) | 106, 395 |
| GluI | GCNGC | 6 cut(s) | 6, 77, 213, 558, 862, 1853 |
| GsuI | CTGGAG | 1 cut(s) | 287 |
| HaeII | RGCGCY | 1 cut(s) | 397 |
| HaeIII | GGCC | 2 cut(s) | 1747, 2136 |
| HapII | CCGG | 3 cut(s) | 1910, 1971, 2349 |
| HgaI | GACGC | 1 cut(s) | 112 |
| HhaI | GCGC | 2 cut(s) | 107, 396 |
| Hin1I | GRCGYC | 2 cut(s) | 123, 519 |
| Hin1II | CATG | 9 cut(s) | 44, 280, 344, 389, 1070, 1357, 1460, 1477, 1603 |
| Hin6I | GCGC | 2 cut(s) | 105, 394 |
| HinP1I | GCGC | 2 cut(s) | 105, 394 |
| HincII | GTYRAC | 1 cut(s) | 514 |
| HindII | GTYRAC | 1 cut(s) | 514 |
| HindIII | AAGCTT | 3 cut(s) | 15, 1256, 2144 |
| HpaII | CCGG | 3 cut(s) | 1910, 1971, 2349 |
| HphI | GGTGA | 5 cut(s) | 79, 1118, 1899, 1970, 2436 |
| Hpy166II | GTNNAC | 6 cut(s) | 514, 1109, 1698, 2235, 2376, 2460 |
| Hpy188I | TCNGA | 9 cut(s) | 62, 229, 381, 625, 1621, 1812, 1846, 2266, 2295 |
| Hpy8I | GTNNAC | 6 cut(s) | 514, 1109, 1698, 2235, 2376, 2460 |
| Hpy99I | CGWCG | 1 cut(s) | 521 |
| HpyCH4IV | ACGT | 6 cut(s) | 45, 519, 931, 1522, 1848, 2336 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 14, 63, 102, 1462, 1666 |
| HpySE526I | ACGT | 6 cut(s) | 45, 519, 931, 1522, 1848, 2336 |
| Hsp92I | GRCGYC | 2 cut(s) | 123, 519 |
| Hsp92II | CATG | 9 cut(s) | 44, 280, 344, 389, 1070, 1357, 1460, 1477, 1603 |
| HspAI | GCGC | 2 cut(s) | 105, 394 |
| Ksp22I | TGATCA | 2 cut(s) | 273, 594 |
| LguI | GCTCTTC | 1 cut(s) | 384 |
| LmnI | GCTCC | 3 cut(s) | 262, 1093, 1381 |
| Lsp1109I | GCAGC | 3 cut(s) | 17, 873, 1839 |
| MabI | ACCWGGT | 1 cut(s) | 1794 |
| MaeI | CTAG | 7 cut(s) | 204, 525, 566, 1097, 1116, 1151, 2090 |
| MaeII | ACGT | 6 cut(s) | 45, 519, 931, 1522, 1848, 2336 |
| MaeIII | GTNAC | 6 cut(s) | 520, 722, 932, 964, 1373, 1423 |
| MfeI | CAATTG | 1 cut(s) | 2159 |
| MflI | RGATCY | 3 cut(s) | 425, 2059, 2092 |
| MhlI | GDGCHC | 3 cut(s) | 2237, 2378, 2462 |
| MluI | ACGCGT | 1 cut(s) | 2462 |
| MlyI | GAGTC | 4 cut(s) | 430, 1590, 1822, 2304 |
| MmeI | TCCRAC | 3 cut(s) | 550, 640, 1644 |
| Mph1103I | ATGCAT | 2 cut(s) | 1458, 2474 |
| MroXI | GAANNNNTTC | 1 cut(s) | 577 |
| MspCI | CTTAAG | 1 cut(s) | 2006 |
| MspI | CCGG | 3 cut(s) | 1910, 1971, 2349 |
| MspR9I | CCNGG | 6 cut(s) | 948, 1343, 1796, 1972, 2325, 2350 |
| MunI | CAATTG | 1 cut(s) | 2159 |
| MvaI | CCWGG | 4 cut(s) | 948, 1343, 1796, 2325 |
| MvnI | CGCG | 3 cut(s) | 76, 239, 2464 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 14, 63, 102, 1462, 1666 |
| NciI | CCSGG | 2 cut(s) | 1972, 2350 |
| NlaIII | CATG | 9 cut(s) | 44, 280, 344, 389, 1070, 1357, 1460, 1477, 1603 |
| NlaIV | GGNNCC | 2 cut(s) | 835, 1383 |
| NmuCI | GTSAC | 3 cut(s) | 520, 932, 1373 |
| NsbI | TGCGCA | 1 cut(s) | 106 |
| NsiI | ATGCAT | 2 cut(s) | 1458, 2474 |
| NspI | RCATGY | 1 cut(s) | 344 |
| PaeR7I | CTCGAG | 1 cut(s) | 1934 |
| PagI | TCATGA | 1 cut(s) | 1353 |
| PciI | ACATGT | 1 cut(s) | 340 |
| PciSI | GCTCTTC | 1 cut(s) | 384 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 516 |
| PdmI | GAANNNNTTC | 1 cut(s) | 577 |
| PfeI | GAWTC | 8 cut(s) | 242, 463, 578, 1616, 1841, 1975, 2296, 2320 |
| Pfl23II | CGTACG | 1 cut(s) | 1489 |
| PflFI | GACNNNGTC | 3 cut(s) | 518, 1349, 1966 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1897 |
| PfoI | TCCNGGA | 2 cut(s) | 1970, 2348 |
| PkrI | GCNGC | 6 cut(s) | 7, 78, 214, 559, 863, 1854 |
| PleI | GAGTC | 4 cut(s) | 430, 1590, 1821, 2304 |
| PpsI | GAGTC | 4 cut(s) | 430, 1590, 1821, 2304 |
| PscI | ACATGT | 1 cut(s) | 340 |
| PshBI | ATTAAT | 1 cut(s) | 1028 |
| PsiI | TTATAA | 1 cut(s) | 500 |
| Psp6I | CCWGG | 4 cut(s) | 946, 1341, 1794, 2323 |
| PspGI | CCWGG | 4 cut(s) | 946, 1341, 1794, 2323 |
| PspLI | CGTACG | 1 cut(s) | 1489 |
| PspN4I | GGNNCC | 2 cut(s) | 835, 1383 |
| PspPI | GGNCC | 3 cut(s) | 81, 834, 944 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 527, 559 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1666 |
| PsuI | RGATCY | 3 cut(s) | 425, 2059, 2092 |
| PsyI | GACNNNGTC | 3 cut(s) | 518, 1349, 1966 |
| RsaI | GTAC | 9 cut(s) | 236, 295, 820, 873, 1183, 1491, 1639, 1992, 2278 |
| RsaNI | GTAC | 9 cut(s) | 235, 294, 819, 872, 1182, 1490, 1638, 1991, 2277 |
| SapI | GCTCTTC | 1 cut(s) | 384 |
| SatI | GCNGC | 6 cut(s) | 6, 77, 213, 558, 862, 1853 |
| Sau96I | GGNCC | 3 cut(s) | 81, 834, 944 |
| ScaI | AGTACT | 1 cut(s) | 820 |
| SchI | GAGTC | 4 cut(s) | 430, 1590, 1822, 2304 |
| ScrFI | CCNGG | 6 cut(s) | 948, 1343, 1796, 1972, 2325, 2350 |
| SduI | GDGCHC | 3 cut(s) | 2237, 2378, 2462 |
| SexAI | ACCWGGT | 1 cut(s) | 1794 |
| Sfr274I | CTCGAG | 1 cut(s) | 1934 |
| SinI | GGWCC | 3 cut(s) | 81, 834, 944 |
| SlaI | CTCGAG | 1 cut(s) | 1934 |
| SmlI | CTYRAG | 7 cut(s) | 257, 438, 1049, 1157, 1856, 1934, 2006 |
| SmoI | CTYRAG | 7 cut(s) | 257, 438, 1049, 1157, 1856, 1934, 2006 |
| SpeI | ACTAGT | 1 cut(s) | 565 |
| SspI | AATATT | 2 cut(s) | 318, 1362 |
| SspMI | CTAG | 7 cut(s) | 204, 525, 566, 1097, 1116, 1151, 2090 |
| StyD4I | CCNGG | 6 cut(s) | 946, 1341, 1794, 1970, 2323, 2348 |
| StyI | CCWWGG | 1 cut(s) | 837 |
| TaiI | ACGT | 6 cut(s) | 48, 522, 934, 1525, 1851, 2339 |
| TaqI | TCGA | 7 cut(s) | 245, 1251, 1414, 1468, 1806, 1935, 2035 |
| TatI | WGTACW | 4 cut(s) | 818, 1181, 1637, 1990 |
| TauI | GCSGC | 3 cut(s) | 79, 215, 560 |
| TfiI | GAWTC | 8 cut(s) | 242, 463, 578, 1616, 1841, 1975, 2296, 2320 |
| TscAI | CASTG | 7 cut(s) | 1519, 1705, 2137, 2242, 2247, 2306, 2320 |
| TseFI | GTSAC | 3 cut(s) | 520, 932, 1373 |
| TseI | GCWGC | 3 cut(s) | 5, 861, 1852 |
| Tsp45I | GTSAC | 3 cut(s) | 520, 932, 1373 |
| TspDTI | ATGAA | 8 cut(s) | 124, 402, 501, 695, 1046, 1352, 1449, 1560 |
| TspGWI | ACGGA | 1 cut(s) | 1397 |
| TspRI | CASTG | 7 cut(s) | 1519, 1705, 2137, 2242, 2247, 2306, 2320 |
| Tth111I | GACNNNGTC | 3 cut(s) | 518, 1349, 1966 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1897 |
| Vha464I | CTTAAG | 1 cut(s) | 2006 |
| VneI | GTGCAC | 3 cut(s) | 2233, 2374, 2458 |
| VpaK11BI | GGWCC | 3 cut(s) | 81, 834, 944 |
| VspI | ATTAAT | 1 cut(s) | 1028 |
| XapI | RAATTY | 5 cut(s) | 448, 506, 645, 1100, 1245 |
| XbaI | TCTAGA | 2 cut(s) | 1096, 2089 |
| XceI | RCATGY | 1 cut(s) | 344 |
| XhoI | CTCGAG | 1 cut(s) | 1934 |
| XmnI | GAANNNNTTC | 1 cut(s) | 577 |
| XspI | CTAG | 7 cut(s) | 204, 525, 566, 1097, 1116, 1151, 2090 |
| ZraI | GACGTC | 1 cut(s) | 520 |
| ZrmI | AGTACT | 1 cut(s) | 820 |
| Zsp2I | ATGCAT | 2 cut(s) | 1458, 2474 |