RLG00000001186

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
11581765 .. 11585004
3240 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001186

Sequence Viewer

Length: 1614 bp
ATGAAGTCTCTGGGGCCATCATCGTCATCATCCCGGCGGAGGCCACGATCCTCATTACCCCAGTGGAGGTCATCATCCCGTCCGCGGCCACCATCCTCATCGTCACCAGTGGAGCCACCAACCTACGACGTGTTTTTGAGCTTCCGAAGTAACGATACACGTAGGACCTTCACGGACCACCTCTACAAGGCATTAGATTGTGCGGGAGTCAGGATGTTTCAGGATGCCGAGGAATTAAGAAGAAGGGAAAACATATCAGAGGAATTGGTGCAGATAATTCAAGAGTGTAGGATTTCTCTAATCGTCTTCTCAGAGAACTATGCGGATTCAAGTTGGTGTCTCGAGGAGCTGGTGCAGATCCTGGAGTGTAGAAAAACACGGGGACAGTTGGTCTTCCCAATATTCTATCATGTTGATCCTTCTGATGTCAGAAACCAGGCCAGTAGTTTTGGTGAGGCATTTGAGAAACATGAAGCTAGATATCAATATCAATATCAAGCACCCAGCTGGTGGAGATCTGCAATTGATGGAGCAATTATTCAAGCAAAACTACTTATTGGACGAACGATTACTAGCTACCCAAATACGCAAAAGAAATATGAATATGAAGCTAGACATGACGATACAGAAAAGATAGCGAGGTGGAGAGCTGCTCTTAAAGAAGCAGCAAATTTGGCCGGCTTCGATATCTCTGATAGGCCTGAAGCAGAGTTTATCAGTAGCATTGTTGACGAGATATGCAGACAGCTGACCACCACATTCTTGAATTTAGCTGTCTACCCAGTCGGAATAGATTCTCATGTTCAAGATATTAGTAATTGTTTAGGTGATGGATTAGATAAAGATGTTCGCATGGTTGGAATTTGGGGTATGGGTGGAATTGGGAAAACAACAGTTGCCAAAGCCATCTATAACAAATTTTATTATGAATTTGACAGTAGATGTTTCCTAGCAGATGCTAGGGAGACTGCAAAGGACTCAAATGGTAAGATTACTCTGCAAGAAAGACTTCTTTCTGATGTCTTAAAACCAACCAAGATACTGGTAGGGTCTTTCCTTTTTGGAAGGAGCACAGGAGAATGGAGTAGCACGCTGAAGAAATTGGAAAACATTCCTGATGTCAGAATTCAGTCAAAACTCAGAATAACTCTGATGCAATGGATGAGAGCCAGAGGAACATATTCCTCCATTTATGTTGTTACTTCATCGGAATGGACAAGAACTATGTCATACAAATACTCGAACGCTGTGGTTTTTTTTCCAGAAATAGAAATCAGTGTCCTGCTCCAACGTTGCCTTGTAACTGTTAGTGAGAAAAACAAGCTCATGACGCATGATTTGCTTCGAGACATGGGCAGAGAAGTTGTTCGTGAAGAATCCCCTAACCACCCTGAAAGACGTAGTAGATTGTGGCGTCAGGAAGATGTAATAGATGTATGGACAGATGAATCTGTAAGTACTCCCAGCCCAGTCAAGACAAGCATAGGCATCCTATCTCTAATACTAATAGTGAAGAAGCATTGCTCAATTATGCAAAGCCATCCTATCTCTGATTCTTCTAATAGTACTGCTTCAAATTCTAGTGTCCGTAATCCAGTCATTTCATTGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

538

Amino Acids

61.42

Weight (kDa)

8.57

Isoelectric Point (pI)

59.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 42 - 171 1.2e-43 TIR domain
TIR_2 PF13676 44 - 140 1.1e-14 TIR domain
NB-ARC PF00931 267 - 323 7.8e-07 NB-ARC domain
WHD_ROQ1 PF23282 419 - 460 3.8e-08 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 510
AccI GTMKAC 1 cut(s) 777
AccII CGCG 1 cut(s) 85
AciI CCGC 5 cut(s) 37, 83, 85, 203, 323
AclI AACGTT 1 cut(s) 1291
AclWI GGATC 3 cut(s) 42, 352, 410
AcoI YGGCCR 2 cut(s) 86, 675
AcsI RAATTY 7 cut(s) 670, 766, 861, 917, 929, 1125, 1576
AcuI CTGAAG 2 cut(s) 723, 1115
AcyI GRCGYC 1 cut(s) 1414
AfaI GTAC 2 cut(s) 1459, 1567
AfiI CCNNNNNNNGG 5 cut(s) 39, 66, 84, 187, 510
AflIII ACRYGT 2 cut(s) 129, 158
AgsI TTSAA 6 cut(s) 281, 330, 542, 766, 806, 1575
AhdI GACNNNNNGTC 1 cut(s) 389
AjiI CACGTC 1 cut(s) 130
AjnI CCWGG 2 cut(s) 360, 435
Alw21I GWGCWC 1 cut(s) 1073
Alw26I GTCTC 4 cut(s) 12, 344, 959, 1341
AlwI GGATC 3 cut(s) 42, 352, 410
AlwNI CAGNNNCTG 1 cut(s) 361
Ama87I CYCGRG 1 cut(s) 341
AoxI GGCC 6 cut(s) 14, 41, 86, 438, 675, 698
ApeKI GCWGC 2 cut(s) 650, 665
ApoI RAATTY 7 cut(s) 670, 766, 861, 917, 929, 1125, 1576
ArsI GACNNNNNNTTYG 2 cut(s) 1321, 1353
Asp700I GAANNNNTTC 5 cut(s) 793, 1008, 1110, 1180, 1365
AspS9I GGNCC 3 cut(s) 14, 165, 175
AsuC2I CCSGG 1 cut(s) 34
AsuHPI GGTGA 3 cut(s) 96, 464, 839
AvaI CYCGRG 1 cut(s) 341
AvaII GGWCC 2 cut(s) 165, 175
BarI GAAGNNNNNNTAC 2 cut(s) 139, 171
BbsI GAAGAC 2 cut(s) 298, 385
Bbv12I GWGCWC 1 cut(s) 1073
BbvI GCAGC 2 cut(s) 637, 677
BccI CCATC 6 cut(s) 25, 100, 521, 824, 914, 1548
BciT130I CCWGG 2 cut(s) 362, 437
BcnI CCSGG 1 cut(s) 34
BcoDI GTCTC 4 cut(s) 12, 344, 959, 1341
BfaI CTAG 6 cut(s) 477, 573, 612, 950, 960, 1581
BglII AGATCT 1 cut(s) 515
BisI GCNGC 3 cut(s) 86, 651, 666
BlsI GCNGC 3 cut(s) 87, 652, 667
BmcAI AGTACT 2 cut(s) 1459, 1567
Bme1390I CCNGG 3 cut(s) 34, 362, 437
Bme18I GGWCC 2 cut(s) 165, 175
BmeRI GACNNNNNGTC 1 cut(s) 389
BmeT110I CYCGRG 1 cut(s) 341
BmgBI CACGTC 1 cut(s) 130
BmgT120I GGNCC 3 cut(s) 14, 165, 175
BmiI GGNNCC 2 cut(s) 15, 114
BmrFI CCNGG 3 cut(s) 34, 362, 437
BmrI ACTGGG 3 cut(s) 55, 776, 1463
BmsI GCATC 4 cut(s) 214, 946, 1143, 1497
BmuI ACTGGG 3 cut(s) 55, 776, 1463
BpiI GAAGAC 2 cut(s) 298, 385
BplI GAGNNNNNCTC 2 cut(s) 637, 669
BpmI CTGGAG 1 cut(s) 383
BpuMI CCSGG 1 cut(s) 34
BsaAI YACGTR 1 cut(s) 161
BsaHI GRCGYC 1 cut(s) 1414
BsaJI CCNNGG 2 cut(s) 83, 228
Bsc4I CCNNNNNNNGG 5 cut(s) 39, 66, 84, 187, 510
Bse118I RCCGGY 1 cut(s) 677
Bse1I ACTGG 7 cut(s) 61, 107, 441, 782, 1047, 1469, 1595
Bse3DI GCAATG 2 cut(s) 1163, 1519
BseBI CCWGG 2 cut(s) 362, 437
BseDI CCNNGG 2 cut(s) 83, 228
BseGI GGATG 8 cut(s) 29, 74, 92, 219, 229, 1167, 1488, 1540
BseLI CCNNNNNNNGG 5 cut(s) 39, 66, 84, 187, 510
BseMI GCAATG 2 cut(s) 1163, 1519
BseMII CTCAG 2 cut(s) 324, 1153
BseNI ACTGG 7 cut(s) 61, 107, 441, 782, 1047, 1469, 1595
BseRI GAGGAG 1 cut(s) 359
BseXI GCAGC 2 cut(s) 637, 677
BseYI CCCAGC 2 cut(s) 503, 1463
BsgI GTGCAG 2 cut(s) 290, 374
Bsh1236I CGCG 1 cut(s) 85
BshFI GGCC 6 cut(s) 16, 43, 88, 440, 677, 700
BsiHKAI GWGCWC 1 cut(s) 1073
BsiHKCI CYCGRG 1 cut(s) 341
BsiSI CCGG 2 cut(s) 34, 678
BslFI GGGAC 1 cut(s) 396
BslI CCNNNNNNNGG 5 cut(s) 39, 66, 84, 187, 510
BsmAI GTCTC 4 cut(s) 12, 344, 959, 1341
BsmFI GGGAC 1 cut(s) 396
BsnI GGCC 6 cut(s) 16, 43, 88, 440, 677, 700
BsoBI CYCGRG 1 cut(s) 341
Bsp1286I GDGCHC 1 cut(s) 1073
Bsp143I GATC 4 cut(s) 47, 357, 415, 515
BspACI CCGC 5 cut(s) 37, 83, 85, 203, 323
BspANI GGCC 6 cut(s) 16, 43, 88, 440, 677, 700
BspCNI CTCAG 2 cut(s) 323, 1152
BspFNI CGCG 1 cut(s) 85
BspHI TCATGA 1 cut(s) 1326
BspLI GGNNCC 2 cut(s) 15, 114
BspPI GGATC 3 cut(s) 42, 352, 410
BsrDI GCAATG 2 cut(s) 1163, 1519
BsrFI RCCGGY 1 cut(s) 677
BsrI ACTGG 7 cut(s) 61, 107, 441, 782, 1047, 1469, 1595
BssAI RCCGGY 1 cut(s) 677
BssECI CCNNGG 2 cut(s) 83, 228
BssMI GATC 4 cut(s) 47, 357, 415, 515
BssNI GRCGYC 1 cut(s) 1414
Bst2UI CCWGG 2 cut(s) 362, 437
Bst4CI ACNGT 4 cut(s) 387, 895, 938, 1306
BstACI GRCGYC 1 cut(s) 1414
BstAPI GCANNNNNTGC 1 cut(s) 1339
BstBAI YACGTR 1 cut(s) 161
BstC8I GCNNGC 2 cut(s) 679, 1091
BstDEI CTNAG 2 cut(s) 310, 1139
BstDSI CCRYGG 1 cut(s) 83
BstENI CCTNNNNNAGG 1 cut(s) 185
BstF5I GGATG 8 cut(s) 29, 74, 92, 219, 229, 1167, 1488, 1540
BstFNI CGCG 1 cut(s) 85
BstKTI GATC 4 cut(s) 50, 360, 418, 518
BstMAI GTCTC 4 cut(s) 12, 344, 959, 1341
BstMBI GATC 4 cut(s) 47, 357, 415, 515
BstMWI GCNNNNNNNGC 3 cut(s) 674, 1330, 1339
BstNI CCWGG 2 cut(s) 362, 437
BstSCI CCNGG 3 cut(s) 32, 360, 435
BstUI CGCG 1 cut(s) 85
BstV1I GCAGC 2 cut(s) 637, 677
BstV2I GAAGAC 2 cut(s) 298, 385
BstX2I RGATCY 2 cut(s) 357, 515
BstXI CCANNNNNNTGG 1 cut(s) 1042
BstYI RGATCY 2 cut(s) 357, 515
BsuRI GGCC 6 cut(s) 16, 43, 88, 440, 677, 700
BtgI CCRYGG 1 cut(s) 83
BtrI CACGTC 1 cut(s) 130
BtsCI GGATG 8 cut(s) 29, 74, 92, 219, 229, 1167, 1488, 1540
BtsIMutI CAGTG 3 cut(s) 68, 114, 1282
Cac8I GCNNGC 2 cut(s) 679, 1091
CaiI CAGNNNCTG 1 cut(s) 361
CciI TCATGA 1 cut(s) 1326
Cfr10I RCCGGY 1 cut(s) 677
Cfr13I GGNCC 3 cut(s) 14, 165, 175
Cfr42I CCGCGG 1 cut(s) 86
CseI GACGC 2 cut(s) 1339, 1403
Csp6I GTAC 2 cut(s) 1458, 1566
CviAII CATG 8 cut(s) 410, 470, 617, 800, 853, 1327, 1334, 1351
CviQI GTAC 2 cut(s) 1458, 1566
DdeI CTNAG 2 cut(s) 310, 1139
DpnI GATC 4 cut(s) 49, 359, 417, 517
DpnII GATC 4 cut(s) 47, 357, 415, 515
DriI GACNNNNNGTC 1 cut(s) 389
EaeI YGGCCR 2 cut(s) 86, 675
Eam1105I GACNNNNNGTC 1 cut(s) 389
EciI GGCGGA 1 cut(s) 52
Eco147I AGGCCT 1 cut(s) 700
Eco32I GATATC 2 cut(s) 482, 688
Eco47I GGWCC 2 cut(s) 165, 175
Eco57I CTGAAG 2 cut(s) 723, 1115
Eco88I CYCGRG 1 cut(s) 341
EcoNI CCTNNNNNAGG 1 cut(s) 185
EcoO109I RGGNCCY 1 cut(s) 165
EcoRI GAATTC 1 cut(s) 1125
EcoRII CCWGG 2 cut(s) 360, 435
EcoRV GATATC 2 cut(s) 482, 688
FaeI CATG 8 cut(s) 413, 473, 620, 803, 856, 1330, 1337, 1354
FalI AAGNNNNNCTT 2 cut(s) 993, 1025
FaqI GGGAC 1 cut(s) 396
FatI CATG 8 cut(s) 409, 469, 616, 799, 852, 1326, 1333, 1350
FauI CCCGC 1 cut(s) 196
FblI GTMKAC 1 cut(s) 777
Fnu4HI GCNGC 3 cut(s) 86, 651, 666
FokI GGATG 8 cut(s) 16, 61, 79, 226, 236, 1174, 1475, 1527
Fsp4HI GCNGC 3 cut(s) 86, 651, 666
FspBI CTAG 6 cut(s) 477, 573, 612, 950, 960, 1581
GluI GCNGC 3 cut(s) 86, 651, 666
GsaI CCCAGC 2 cut(s) 507, 1467
GsuI CTGGAG 1 cut(s) 383
HaeIII GGCC 6 cut(s) 16, 43, 88, 440, 677, 700
HapII CCGG 2 cut(s) 34, 678
HgaI GACGC 2 cut(s) 1339, 1403
Hin1I GRCGYC 1 cut(s) 1414
Hin1II CATG 8 cut(s) 413, 473, 620, 803, 856, 1330, 1337, 1354
HincII GTYRAC 1 cut(s) 730
HindII GTYRAC 1 cut(s) 730
HinfI GANTC 7 cut(s) 207, 326, 794, 977, 1376, 1448, 1553
HpaII CCGG 2 cut(s) 34, 678
HphI GGTGA 3 cut(s) 96, 464, 839
Hpy166II GTNNAC 2 cut(s) 730, 778
Hpy8I GTNNAC 2 cut(s) 730, 778
Hpy99I CGWCG 1 cut(s) 131
HpyAV CCTTC 4 cut(s) 178, 237, 429, 1059
HpyCH4III ACNGT 4 cut(s) 387, 895, 938, 1306
HpyCH4IV ACGT 4 cut(s) 129, 160, 1291, 1399
HpyCH4V TGCA 8 cut(s) 271, 355, 521, 741, 971, 1000, 1156, 1534
HpyF10VI GCNNNNNNNGC 3 cut(s) 674, 1330, 1339
HpyF3I CTNAG 2 cut(s) 310, 1139
HpySE526I ACGT 4 cut(s) 129, 160, 1291, 1399
Hsp92I GRCGYC 1 cut(s) 1414
Hsp92II CATG 8 cut(s) 413, 473, 620, 803, 856, 1330, 1337, 1354
KroI GCCGGC 1 cut(s) 677
KroNI GCCGGC 1 cut(s) 679
KspI CCGCGG 1 cut(s) 86
Kzo9I GATC 4 cut(s) 47, 357, 415, 515
LmnI GCTCC 5 cut(s) 112, 346, 530, 1068, 1290
Lsp1109I GCAGC 2 cut(s) 637, 677
LweI GCATC 4 cut(s) 214, 946, 1143, 1497
MaeI CTAG 6 cut(s) 477, 573, 612, 950, 960, 1581
MaeII ACGT 4 cut(s) 129, 160, 1291, 1399
MaeIII GTNAC 4 cut(s) 102, 149, 1198, 1300
MalI GATC 4 cut(s) 49, 359, 417, 517
MboI GATC 4 cut(s) 47, 357, 415, 515
MboII GAAGA 8 cut(s) 252, 298, 385, 1108, 1385, 1433, 1525, 1548
MfeI CAATTG 1 cut(s) 522
MflI RGATCY 2 cut(s) 357, 515
MhlI GDGCHC 1 cut(s) 1073
MlyI GAGTC 2 cut(s) 216, 971
MmeI TCCRAC 3 cut(s) 766, 838, 1312
MroNI GCCGGC 1 cut(s) 677
MroXI GAANNNNTTC 5 cut(s) 793, 1008, 1110, 1180, 1365
MseI TTAA 3 cut(s) 236, 657, 1025
MslI CAYNNNNRTG 1 cut(s) 1210
MspA1I CMGCKG 3 cut(s) 85, 507, 748
MspI CCGG 2 cut(s) 34, 678
MspR9I CCNGG 3 cut(s) 34, 362, 437
MunI CAATTG 1 cut(s) 522
MvaI CCWGG 2 cut(s) 362, 437
MvnI CGCG 1 cut(s) 85
MwoI GCNNNNNNNGC 3 cut(s) 674, 1330, 1339
NaeI GCCGGC 1 cut(s) 679
NciI CCSGG 1 cut(s) 34
NdeII GATC 4 cut(s) 47, 357, 415, 515
NgoMIV GCCGGC 1 cut(s) 677
NlaIII CATG 8 cut(s) 413, 473, 620, 803, 856, 1330, 1337, 1354
NlaIV GGNNCC 2 cut(s) 15, 114
NmeAIII GCCGAG 1 cut(s) 253
NmuCI GTSAC 1 cut(s) 102
PaeR7I CTCGAG 1 cut(s) 341
PagI TCATGA 1 cut(s) 1326
PceI AGGCCT 1 cut(s) 700
PdiI GCCGGC 1 cut(s) 679
PdmI GAANNNNTTC 5 cut(s) 793, 1008, 1110, 1180, 1365
PfeI GAWTC 5 cut(s) 326, 794, 1376, 1448, 1553
PflMI CCANNNNNTGG 1 cut(s) 510
PfoI TCCNGGA 1 cut(s) 360
PkrI GCNGC 3 cut(s) 87, 652, 667
PleI GAGTC 2 cut(s) 215, 971
PpsI GAGTC 2 cut(s) 215, 971
Ppu21I YACGTR 1 cut(s) 161
PpuMI RGGWCCY 1 cut(s) 165
Psp1406I AACGTT 1 cut(s) 1291
Psp5II RGGWCCY 1 cut(s) 165
Psp6I CCWGG 2 cut(s) 360, 435
PspFI CCCAGC 2 cut(s) 503, 1463
PspGI CCWGG 2 cut(s) 360, 435
PspN4I GGNNCC 2 cut(s) 15, 114
PspPI GGNCC 3 cut(s) 14, 165, 175
PspPPI RGGWCCY 1 cut(s) 165
PstNI CAGNNNCTG 1 cut(s) 361
PsuI RGATCY 2 cut(s) 357, 515
PvuII CAGCTG 2 cut(s) 507, 748
RsaI GTAC 2 cut(s) 1459, 1567
RsaNI GTAC 2 cut(s) 1458, 1566
RseI CAYNNNNRTG 1 cut(s) 1210
SacII CCGCGG 1 cut(s) 86
SaqAI TTAA 3 cut(s) 236, 657, 1025
SatI GCNGC 3 cut(s) 86, 651, 666
Sau3AI GATC 4 cut(s) 47, 357, 415, 515
Sau96I GGNCC 3 cut(s) 14, 165, 175
ScaI AGTACT 2 cut(s) 1459, 1567
SchI GAGTC 2 cut(s) 216, 971
ScrFI CCNGG 3 cut(s) 34, 362, 437
SduI GDGCHC 1 cut(s) 1073
SfaNI GCATC 4 cut(s) 214, 946, 1143, 1497
Sfr274I CTCGAG 1 cut(s) 341
Sfr303I CCGCGG 1 cut(s) 86
SgrBI CCGCGG 1 cut(s) 86
SinI GGWCC 2 cut(s) 165, 175
SlaI CTCGAG 1 cut(s) 341
SmiMI CAYNNNNRTG 1 cut(s) 1210
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
SseBI AGGCCT 1 cut(s) 700
SsiI CCGC 5 cut(s) 37, 83, 85, 203, 323
SspI AATATT 1 cut(s) 402
SspMI CTAG 6 cut(s) 477, 573, 612, 950, 960, 1581
StuI AGGCCT 1 cut(s) 700
StyD4I CCNGG 3 cut(s) 32, 360, 435
TaaI ACNGT 4 cut(s) 387, 895, 938, 1306
TaiI ACGT 4 cut(s) 132, 163, 1294, 1402
TaqI TCGA 4 cut(s) 342, 684, 1241, 1345
TatI WGTACW 2 cut(s) 1457, 1565
TauI GCSGC 1 cut(s) 88
TfiI GAWTC 5 cut(s) 326, 794, 1376, 1448, 1553
Tru1I TTAA 3 cut(s) 236, 657, 1025
Tru9I TTAA 3 cut(s) 236, 657, 1025
TscAI CASTG 3 cut(s) 68, 114, 1282
TseFI GTSAC 1 cut(s) 102
TseI GCWGC 2 cut(s) 650, 665
Tsp45I GTSAC 1 cut(s) 102
TspDTI ATGAA 8 cut(s) 17, 486, 615, 621, 942, 1194, 1461, 1593
TspGWI ACGGA 2 cut(s) 188, 1577
TspRI CASTG 3 cut(s) 68, 114, 1282
Van91I CCANNNNNTGG 1 cut(s) 510
VpaK11BI GGWCC 2 cut(s) 165, 175
XagI CCTNNNNNAGG 1 cut(s) 185
XapI RAATTY 7 cut(s) 670, 766, 861, 917, 929, 1125, 1576
XhoI CTCGAG 1 cut(s) 341
XmiI GTMKAC 1 cut(s) 777
XmnI GAANNNNTTC 5 cut(s) 793, 1008, 1110, 1180, 1365
XspI CTAG 6 cut(s) 477, 573, 612, 950, 960, 1581
ZrmI AGTACT 2 cut(s) 1459, 1567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.