pycom08g17570

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
17793826 .. 17797578
3753 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g17570.4

Sequence Viewer

Length: 2973 bp
ATGAGTACCAGGACACAGCATGAAGCATCCTCCTCATCGAAACGTTGGATGCACGACGTGTTCTTGAGCTTCAGAGGCGAAGACACACGGAACGGCTTCACAGGCCACCTCTGCATGACACTGAAAGAGGCTGGAGTCAACGTGTTTATTGACAACCAGCTAAGAAGAGGGGAAGAAATAACAGCAGAACTGGTGCAGGCAATCCGAGGGTCTAGGATTTCCGTCGTCGTCTTCTCAAAGAGGTATGCAGATTCAAGCTGGTGTCTTCAGGAGCTTGTGGAGATCATGGAGTGTAGGAGAAGACTTGGACAAATAGTCTTGCCAGTATTCTACGATGTCGATCCTTCACATGTCAGGAAACAGACTAGTGCTACTTTTGCACAAGCATTTCAGAAACATGAAGAATGCTTCCATGAAGATACCGATAAGGTAGCGAGGTGGAGAGCTGCTCTTACGGAAGCTTCAAATTTGTCCGGTTGGGATCTCAAAAACACTGCAAATGGGCATGAGGCGCAGTTTATCAGAAGAATTATTGGCGAGATCACTAAGCAACTCGATACCACGTACTTAAATGTAGCTGTCTACCAAGTGGGAATAGATTCTCGGGTGAATGAGATTAACAGCTTAGACGGGGGATCATACGATGTTCAAATGGTCGGAATTTGGGGCATGGGTGGAATGGGGAAAACATCAGTTGCAAAAGCCATCTATAACAAGTTCTACCATAGCTTTGAGTACAAAAGTTTCCTTGCAAATGTTAGGGAAACTGCAAAGGAATCGAATGGCATGACGAATTTGCAAGAAAAGCTTCTTTCTGATATCTTCAAACCAACCAAGGTGGAGGTTGGTGATGTTCATAGAGGTATTAATCTGATAAAAGAAAAACTTCGAAGCAGAGAGGTACTGGTCATAATTGACGATGTAGATCATGTGGACCAACTAAATGCTTTAGCTATAGCCCGGGACTCCTTTGGTCGAGGAAGTAAAATTTTTATTACAACCAGAGATCGACACCTACTGGAGCAAGTTGAAGTTAATATAATATATCTGGCTCGAAAAATGAAGGAAGAAGAAGCTCTTGAGCTCTTTAGTTGGCATGCCTTTCGAAATCCCTGTCCTAATGAAGAATACAGTGAACTGACAAGAAGTGTTCTTGGTTACTGTGGAGGTTTACCGCTTGCTCTTGAAGTTTTAGGTTCTTTTCTGTTTAAAAGAAGCTTAAGAGATTGGACAAGCACATTGAAGAAGTTGGAAAAAATTCCTCGTTTTGAAATTCAAGAAAAGCTTAAAATAAGCTTTGATGCACTAAGTGATGAAGATGAGAGGGAAATATTCCTTGATATATCTTGTTTCTTCATAGGAATGGACAGGAACTATGTCACAAGGATCTTCGACGGTTGTGGGTTTTTTGCAGAAATTGGAATTAGCGTCCTCCTGCAACGATGCCTTGTAACTGTTGATGAGAAAAACAAGCTCGTGATGCATGATCGACTTCGAGACATGGGCAGAGAAATCGTGCGTGCAAAATTTCCAAACCACCCTGGCAGGTGTAGTAGATTGTGGTGCCAAGAAGATGCAATAGGTGTACTGACGGACAAATCTGGAACAGAAGAAATTGAAGGACTCGCTCTAAATTTGCTAAGACCAGACAAAGCTAATTTCAATATGAAAGCTTTTAAAAAGATGAAGAGTCTGAGATTGCTCCAACTTAATCGTGTACAGCTCACTGGAGAGTACAAACATCTTTCCGAAAAGTTAAGATGGATTTGCTGGCGAGGATTCCCTCTAAAGTTCATACCAAAAAAAGCATTAAATCAATTAAGAAGCCTAGTTTCTATCGACCTACGGTACAGCAACCTCAGACGGTTTTGGGAGCATTCTATGTTGCTCGAGAAGTTGAAGATTCTGAATCTCAGCCATTCGTACTTCCTAAAACAATTGCCAAACTTCTCAAAACTCCCAAATCTCGAGTATTTGGTACTCAAGGGCTGTAAGAGCTTGCTCGAGATTCACCACTCTGTAGGATGTCTTGAAAGACTTGCTTTGGTAAATCTCAAAGACTGCATAATGCTCAAGGATCTTCCAAAGAGTTTCTATAAGTTGAAACACGTTGAAACTCTTGTTCTTTCTGGCTGTTCAAGATTTCAAAACTTGGTTGCGGATATAGGAGAGATGGTATCATTGACAACTCTTCTTATAGATAACACGGCCATAGAAGAATTACCATATTCTTCCATAGCACGGTTGAAGAACCTGACACGTTTATCTCTATGTGGTCTGAAACTTATAGAACCCAACCCTTCCGTTTGGCCTTTGGTATTGACAAGAGAATATCCACCTGAATTACATTGCTCAATTTCTTCTGAGGATTTCAGGACTATCGACATGTATAGCAACGATTTTTATATCCTTCCGAGGAATCATCATAAGCGCAAGACAACGAGTGGAGATGCTGTCATTTTCCACCCTGGAAATGATATTGCCAAGTGGTTCACAAATGTTGACAATGAGGGTGATCGAGTCTGTTTCCAAGTGCCTCAAATCACTGGTTCTAACTTAAAATCGTTGACTGTGTGCACCGTTTATTCTTCATCATTACACAAGGACGCACCTCTTAATCATTTTGCTATATTTATTACGAATCATACCAAGATCATCAGCTTCGTTGTCCGGCCAATGGATCCCTACACAATAACTTCAAATGAAGTCATTTGGCAAGGACATTTATCAAACAAGGAGCTCAGTTTGGAAAGGGGAGACTCCATTGAAGTTTATATTGTGATGGGATCTGGTTTCAGGGTGAAGAAAACGGGGGTACATCTCGTATGGGATCCTGAATTGATCAACGAAAATGTGATTGAGTTCGAGGCTATCCCATATGCTTATTTCCGCAGTGATGTGGAGTATGAGGCAGGACCGAGTCATGTCTCATTAGATGAGAATCGACCACGCGACGAGTTGTGGTACGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

991

Amino Acids

113.81

Weight (kDa)

7.77

Isoelectric Point (pI)

40.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1536
Acc36I ACCTGC 1 cut(s) 1536
AccB1I GGYRCC 1 cut(s) 1563
AccI GTMKAC 1 cut(s) 582
AccII CGCG 1 cut(s) 2952
AciI CCGC 3 cut(s) 1175, 2159, 2890
AclI AACGTT 1 cut(s) 43
AcoI YGGCCR 2 cut(s) 2208, 2672
AcsI RAATTY 8 cut(s) 466, 660, 793, 987, 1257, 1272, 1526, 1633
AcuI CTGAAG 2 cut(s) 55, 251
AdeI CACNNNGTG 2 cut(s) 58, 1310
AfiI CCNNNNNNNGG 2 cut(s) 2241, 2677
AflII CTTAAG 1 cut(s) 1219
AflIII ACRYGT 6 cut(s) 57, 141, 349, 2107, 2258, 2385
AhdI GACNNNNNGTC 1 cut(s) 314
AhlI ACTAGT 1 cut(s) 365
AjiI CACGTC 1 cut(s) 58
AjnI CCWGG 3 cut(s) 8, 1540, 2467
Alw21I GWGCWC 3 cut(s) 1086, 2579, 2742
Alw26I GTCTC 3 cut(s) 1491, 2751, 2932
Alw44I GTGCAC 1 cut(s) 2575
Ama87I CYCGRG 5 cut(s) 603, 960, 1889, 1967, 2003
AoxI GGCC 4 cut(s) 103, 2208, 2309, 2672
ApaLI GTGCAC 1 cut(s) 2575
ApeKI GCWGC 1 cut(s) 446
ApoI RAATTY 8 cut(s) 466, 660, 793, 987, 1257, 1272, 1526, 1633
ArsI GACNNNNNNTTYG 2 cut(s) 1099, 1131
AseI ATTAAT 1 cut(s) 867
Asp700I GAANNNNTTC 5 cut(s) 95, 598, 807, 885, 1257
AspLEI GCGC 2 cut(s) 514, 2433
AspS9I GGNCC 2 cut(s) 934, 2915
AsuC2I CCSGG 2 cut(s) 961, 962
AsuHPI GGTGA 5 cut(s) 619, 860, 2003, 2525, 2812
AsuII TTCGAA 2 cut(s) 889, 1105
AvaI CYCGRG 5 cut(s) 603, 960, 1889, 1967, 2003
AvaII GGWCC 2 cut(s) 934, 2915
BaeGI GKGCMC 1 cut(s) 2579
BamHI GGATCC 2 cut(s) 2680, 2830
BanI GGYRCC 1 cut(s) 1563
BanII GRGCYC 2 cut(s) 1086, 2742
BauI CACGAG 1 cut(s) 1475
BbsI GAAGAC 4 cut(s) 87, 223, 257, 307
Bbv12I GWGCWC 3 cut(s) 1086, 2579, 2742
BbvI GCAGC 1 cut(s) 433
BccI CCATC 4 cut(s) 713, 1755, 2167, 2776
BceAI ACGGC 2 cut(s) 109, 2223
BcgI CGANNNNNNTGC 6 cut(s) 759, 793, 1085, 1119, 1495, 1529
BciT130I CCWGG 3 cut(s) 10, 1542, 2469
BclI TGATCA 1 cut(s) 2841
BcnI CCSGG 2 cut(s) 961, 962
BcoDI GTCTC 3 cut(s) 1491, 2751, 2932
BcuI ACTAGT 1 cut(s) 365
BfaI CTAG 3 cut(s) 213, 366, 1829
BfmI CTRYAG 2 cut(s) 954, 2019
BfrI CTTAAG 1 cut(s) 1219
BfuAI ACCTGC 1 cut(s) 1536
BisI GCNGC 1 cut(s) 447
BlsI GCNGC 1 cut(s) 448
Bme1390I CCNGG 5 cut(s) 10, 961, 962, 1542, 2469
Bme18I GGWCC 2 cut(s) 934, 2915
BmeRI GACNNNNNGTC 1 cut(s) 314
BmeT110I CYCGRG 5 cut(s) 603, 960, 1889, 1967, 2003
BmgBI CACGTC 1 cut(s) 58
BmgT120I GGNCC 2 cut(s) 934, 2915
BmiI GGNNCC 3 cut(s) 1565, 2682, 2832
BmrFI CCNGG 5 cut(s) 10, 961, 962, 1542, 2469
BmsI GCATC 7 cut(s) 35, 39, 1291, 1433, 1470, 1564, 2440
BpiI GAAGAC 4 cut(s) 87, 223, 257, 307
BplI GAGNNNNNCTC 2 cut(s) 433, 465
BpmI CTGGAG 3 cut(s) 153, 1040, 1749
Bpu14I TTCGAA 2 cut(s) 889, 1105
BpuEI CTTGAG 4 cut(s) 85, 1100, 1967, 2057
BpuMI CCSGG 2 cut(s) 961, 962
BsaAI YACGTR 2 cut(s) 564, 2968
BsaBI GATNNNNATC 3 cut(s) 339, 924, 2940
BsaJI CCNNGG 6 cut(s) 205, 834, 960, 1540, 2414, 2467
BsaWI WCCGGW 1 cut(s) 473
BsaXI ACNNNNNCTCC 6 cut(s) 126, 156, 2160, 2190, 2439, 2469
Bsc4I CCNNNNNNNGG 2 cut(s) 2241, 2677
Bse1I ACTGG 6 cut(s) 195, 323, 909, 1023, 1732, 2551
Bse3DI GCAATG 1 cut(s) 2347
Bse8I GATNNNNATC 3 cut(s) 339, 924, 2940
BseBI CCWGG 3 cut(s) 10, 1542, 2469
BseDI CCNNGG 6 cut(s) 205, 834, 960, 1540, 2414, 2467
BseGI GGATG 3 cut(s) 26, 54, 2030
BseJI GATNNNNATC 3 cut(s) 339, 924, 2940
BseLI CCNNNNNNNGG 2 cut(s) 2241, 2677
BseMI GCAATG 1 cut(s) 2347
BseMII CTCAG 5 cut(s) 1685, 1873, 1927, 2355, 2755
BseNI ACTGG 6 cut(s) 195, 323, 909, 1023, 1732, 2551
BseRI GAGGAG 1 cut(s) 22
BseSI GKGCMC 1 cut(s) 2579
BseXI GCAGC 1 cut(s) 433
BsgI GTGCAG 1 cut(s) 215
Bsh1236I CGCG 1 cut(s) 2952
BshFI GGCC 4 cut(s) 105, 2210, 2311, 2674
BshNI GGYRCC 1 cut(s) 1563
BsiHKAI GWGCWC 3 cut(s) 1086, 2579, 2742
BsiHKCI CYCGRG 5 cut(s) 603, 960, 1889, 1967, 2003
BsiSI CCGG 3 cut(s) 474, 961, 2671
BslFI GGGAC 1 cut(s) 977
BslI CCNNNNNNNGG 2 cut(s) 2241, 2677
BsmAI GTCTC 3 cut(s) 1491, 2751, 2932
BsmFI GGGAC 1 cut(s) 977
BsmI GAATGC 2 cut(s) 410, 1876
BsnI GGCC 4 cut(s) 105, 2210, 2311, 2674
BsoBI CYCGRG 5 cut(s) 603, 960, 1889, 1967, 2003
Bsp119I TTCGAA 2 cut(s) 889, 1105
Bsp1286I GDGCHC 3 cut(s) 1086, 2579, 2742
Bsp1407I TGTACA 1 cut(s) 1717
BspACI CCGC 3 cut(s) 1175, 2159, 2890
BspANI GGCC 4 cut(s) 105, 2210, 2311, 2674
BspCNI CTCAG 5 cut(s) 1686, 1872, 1926, 2356, 2754
BspFNI CGCG 1 cut(s) 2952
BspLI GGNNCC 3 cut(s) 1565, 2682, 2832
BspMI ACCTGC 1 cut(s) 1536
BspT104I TTCGAA 2 cut(s) 889, 1105
BspT107I GGYRCC 1 cut(s) 1563
BspTI CTTAAG 1 cut(s) 1219
BsrDI GCAATG 1 cut(s) 2347
BsrGI TGTACA 1 cut(s) 1717
BsrI ACTGG 6 cut(s) 195, 323, 909, 1023, 1732, 2551
BssECI CCNNGG 6 cut(s) 205, 834, 960, 1540, 2414, 2467
BssSI CACGAG 1 cut(s) 1475
BssT1I CCWWGG 1 cut(s) 834
Bst2BI CACGAG 1 cut(s) 1475
Bst2UI CCWGG 3 cut(s) 10, 1542, 2469
Bst4CI ACNGT 9 cut(s) 1133, 1163, 1397, 1456, 1848, 1866, 2244, 2572, 2581
Bst6I CTCTTC 3 cut(s) 160, 1682, 2196
BstAFI CTTAAG 1 cut(s) 1219
BstAUI TGTACA 1 cut(s) 1717
BstBAI YACGTR 2 cut(s) 564, 2968
BstBI TTCGAA 2 cut(s) 889, 1105
BstC8I GCNNGC 6 cut(s) 198, 1098, 1179, 1521, 1772, 2000
BstF5I GGATG 3 cut(s) 26, 54, 2030
BstFNI CGCG 1 cut(s) 2952
BstHHI GCGC 2 cut(s) 514, 2433
BstMAI GTCTC 3 cut(s) 1491, 2751, 2932
BstMWI GCNNNNNNNGC 8 cut(s) 75, 102, 111, 377, 511, 805, 1480, 1995
BstNI CCWGG 3 cut(s) 10, 1542, 2469
BstNSI RCATGY 3 cut(s) 353, 1100, 2389
BstSCI CCNGG 5 cut(s) 8, 959, 960, 1540, 2467
BstSFI CTRYAG 2 cut(s) 954, 2019
BstSLI GKGCMC 1 cut(s) 2579
BstSNI TACGTA 1 cut(s) 2968
BstUI CGCG 1 cut(s) 2952
BstV1I GCAGC 1 cut(s) 433
BstV2I GAAGAC 4 cut(s) 87, 223, 257, 307
BstX2I RGATCY 6 cut(s) 481, 1386, 2077, 2680, 2786, 2830
BstYI RGATCY 6 cut(s) 481, 1386, 2077, 2680, 2786, 2830
BsuRI GGCC 4 cut(s) 105, 2210, 2311, 2674
BtrI CACGTC 1 cut(s) 58
BtsCI GGATG 3 cut(s) 26, 54, 2030
BtsI GCAGTG 2 cut(s) 492, 2899
BtsIMutI CAGTG 6 cut(s) 119, 492, 1138, 1725, 2544, 2899
BveI ACCTGC 1 cut(s) 1536
Cac8I GCNNGC 6 cut(s) 198, 1098, 1179, 1521, 1772, 2000
CfoI GCGC 2 cut(s) 514, 2433
Cfr13I GGNCC 2 cut(s) 934, 2915
Cfr9I CCCGGG 1 cut(s) 960
CseI GACGC 2 cut(s) 1417, 2615
CspCI CAANNNNNGTGG 2 cut(s) 819, 854
DraI TTTAAA 2 cut(s) 1210, 1678
DraIII CACNNNGTG 2 cut(s) 58, 1310
DriI GACNNNNNGTC 1 cut(s) 314
EaeI YGGCCR 2 cut(s) 2208, 2672
Eam1104I CTCTTC 3 cut(s) 160, 1682, 2196
Eam1105I GACNNNNNGTC 1 cut(s) 314
EarI CTCTTC 3 cut(s) 160, 1682, 2196
Ecl136II GAGCTC 2 cut(s) 1084, 2740
Eco105I TACGTA 1 cut(s) 2968
Eco130I CCWWGG 1 cut(s) 834
Eco24I GRGCYC 2 cut(s) 1086, 2742
Eco32I GATATC 1 cut(s) 820
Eco47I GGWCC 2 cut(s) 934, 2915
Eco53kI GAGCTC 2 cut(s) 1084, 2740
Eco57I CTGAAG 2 cut(s) 55, 251
Eco88I CYCGRG 5 cut(s) 603, 960, 1889, 1967, 2003
EcoICRI GAGCTC 2 cut(s) 1084, 2740
EcoRII CCWGG 3 cut(s) 8, 1540, 2467
EcoRV GATATC 1 cut(s) 820
EcoT14I CCWWGG 1 cut(s) 834
EcoT22I ATGCAT 1 cut(s) 1485
EcoT38I GRGCYC 2 cut(s) 1086, 2742
ErhI CCWWGG 1 cut(s) 834
FaqI GGGAC 1 cut(s) 977
FauNDI CATATG 1 cut(s) 2878
FbaI TGATCA 1 cut(s) 2841
FblI GTMKAC 1 cut(s) 582
Fnu4HI GCNGC 1 cut(s) 447
FokI GGATG 3 cut(s) 13, 61, 2037
FriOI GRGCYC 2 cut(s) 1086, 2742
Fsp4HI GCNGC 1 cut(s) 447
FspBI CTAG 3 cut(s) 213, 366, 1829
GlaI GCGC 2 cut(s) 513, 2432
GluI GCNGC 1 cut(s) 447
GsuI CTGGAG 3 cut(s) 153, 1040, 1749
HaeIII GGCC 4 cut(s) 105, 2210, 2311, 2674
HapII CCGG 3 cut(s) 474, 961, 2671
HgaI GACGC 2 cut(s) 1417, 2615
HhaI GCGC 2 cut(s) 514, 2433
Hin6I GCGC 2 cut(s) 512, 2431
HinP1I GCGC 2 cut(s) 512, 2431
HincII GTYRAC 3 cut(s) 139, 2503, 2568
HindII GTYRAC 3 cut(s) 139, 2503, 2568
HindIII AAGCTT 6 cut(s) 459, 806, 1216, 1283, 1294, 1671
HpaII CCGG 3 cut(s) 474, 961, 2671
HphI GGTGA 5 cut(s) 619, 860, 2003, 2525, 2812
Hpy99I CGWCG 5 cut(s) 59, 227, 230, 1397, 2957
HpyAV CCTTC 5 cut(s) 354, 1057, 1613, 2310, 2420
HpyCH4III ACNGT 9 cut(s) 1133, 1163, 1397, 1456, 1848, 1866, 2244, 2572, 2581
HpyCH4IV ACGT 7 cut(s) 43, 57, 141, 563, 2109, 2260, 2967
HpyF10VI GCNNNNNNNGC 8 cut(s) 75, 102, 111, 377, 511, 805, 1480, 1995
HpySE526I ACGT 7 cut(s) 43, 57, 141, 563, 2109, 2260, 2967
HspAI GCGC 2 cut(s) 512, 2431
Ksp22I TGATCA 1 cut(s) 2841
LmnI GCTCC 5 cut(s) 271, 1021, 1707, 1873, 2737
Lsp1109I GCAGC 1 cut(s) 433
LweI GCATC 7 cut(s) 35, 39, 1291, 1433, 1470, 1564, 2440
MaeI CTAG 3 cut(s) 213, 366, 1829
MaeII ACGT 7 cut(s) 43, 57, 141, 563, 2109, 2260, 2967
MaeIII GTNAC 3 cut(s) 1157, 1378, 1450
MfeI CAATTG 1 cut(s) 1937
MflI RGATCY 6 cut(s) 481, 1386, 2077, 2680, 2786, 2830
MhlI GDGCHC 3 cut(s) 1086, 2579, 2742
MlyI GAGTC 7 cut(s) 144, 959, 1617, 1699, 2529, 2753, 2929
MmeI TCCRAC 4 cut(s) 26, 637, 1230, 1729
Mph1103I ATGCAT 1 cut(s) 1485
MroXI GAANNNNTTC 5 cut(s) 95, 598, 807, 885, 1257
MslI CAYNNNNRTG 1 cut(s) 1361
MspCI CTTAAG 1 cut(s) 1219
MspI CCGG 3 cut(s) 474, 961, 2671
MspR9I CCNGG 5 cut(s) 10, 961, 962, 1542, 2469
MunI CAATTG 1 cut(s) 1937
Mva1269I GAATGC 2 cut(s) 410, 1876
MvaI CCWGG 3 cut(s) 10, 1542, 2469
MvnI CGCG 1 cut(s) 2952
MwoI GCNNNNNNNGC 8 cut(s) 75, 102, 111, 377, 511, 805, 1480, 1995
NciI CCSGG 2 cut(s) 961, 962
NdeI CATATG 1 cut(s) 2878
NlaIV GGNNCC 3 cut(s) 1565, 2682, 2832
NmuCI GTSAC 1 cut(s) 1378
NsiI ATGCAT 1 cut(s) 1485
NspI RCATGY 3 cut(s) 353, 1100, 2389
NspV TTCGAA 2 cut(s) 889, 1105
PaeI GCATGC 1 cut(s) 1100
PaeR7I CTCGAG 3 cut(s) 1889, 1967, 2003
PaqCI CACCTGC 1 cut(s) 1536
PciI ACATGT 2 cut(s) 349, 2385
PctI GAATGC 2 cut(s) 410, 1876
PdmI GAANNNNTTC 5 cut(s) 95, 598, 807, 885, 1257
PflFI GACNNNGTC 1 cut(s) 2919
PkrI GCNGC 1 cut(s) 448
PleI GAGTC 7 cut(s) 143, 959, 1617, 1698, 2528, 2753, 2928
PpsI GAGTC 7 cut(s) 143, 959, 1617, 1698, 2528, 2753, 2928
Ppu21I YACGTR 2 cut(s) 564, 2968
PscI ACATGT 2 cut(s) 349, 2385
PshBI ATTAAT 1 cut(s) 867
Psp124BI GAGCTC 2 cut(s) 1086, 2742
Psp1406I AACGTT 1 cut(s) 43
Psp6I CCWGG 3 cut(s) 8, 1540, 2467
PspGI CCWGG 3 cut(s) 8, 1540, 2467
PspN4I GGNNCC 3 cut(s) 1565, 2682, 2832
PspPI GGNCC 2 cut(s) 934, 2915
PsuI RGATCY 6 cut(s) 481, 1386, 2077, 2680, 2786, 2830
PsyI GACNNNGTC 1 cut(s) 2919
RseI CAYNNNNRTG 1 cut(s) 1361
SacI GAGCTC 2 cut(s) 1086, 2742
SatI GCNGC 1 cut(s) 447
Sau96I GGNCC 2 cut(s) 934, 2915
SchI GAGTC 7 cut(s) 144, 959, 1617, 1699, 2529, 2753, 2929
ScrFI CCNGG 5 cut(s) 10, 961, 962, 1542, 2469
SduI GDGCHC 3 cut(s) 1086, 2579, 2742
SfaNI GCATC 7 cut(s) 35, 39, 1291, 1433, 1470, 1564, 2440
SfcI CTRYAG 2 cut(s) 954, 2019
Sfr274I CTCGAG 3 cut(s) 1889, 1967, 2003
SfuI TTCGAA 2 cut(s) 889, 1105
SinI GGWCC 2 cut(s) 934, 2915
SlaI CTCGAG 3 cut(s) 1889, 1967, 2003
SmaI CCCGGG 1 cut(s) 962
SmiMI CAYNNNNRTG 1 cut(s) 1361
SmlI CTYRAG 8 cut(s) 64, 1079, 1219, 1889, 1967, 1982, 2003, 2072
SmoI CTYRAG 8 cut(s) 64, 1079, 1219, 1889, 1967, 1982, 2003, 2072
SnaBI TACGTA 1 cut(s) 2968
SpeI ACTAGT 1 cut(s) 365
SphI GCATGC 1 cut(s) 1100
SsiI CCGC 3 cut(s) 1175, 2159, 2890
SspI AATATT 1 cut(s) 1332
SspMI CTAG 3 cut(s) 213, 366, 1829
SstI GAGCTC 2 cut(s) 1086, 2742
StyD4I CCNGG 5 cut(s) 8, 959, 960, 1540, 2467
StyI CCWWGG 1 cut(s) 834
TaaI ACNGT 9 cut(s) 1133, 1163, 1397, 1456, 1848, 1866, 2244, 2572, 2581
TaiI ACGT 7 cut(s) 46, 60, 144, 566, 2112, 2263, 2970
TaqII GACCGA 1 cut(s) 2932
TatI WGTACW 4 cut(s) 735, 1585, 1717, 1734
TscAI CASTG 6 cut(s) 126, 499, 1138, 1732, 2551, 2899
TseFI GTSAC 1 cut(s) 1378
TseI GCWGC 1 cut(s) 446
Tsp45I GTSAC 1 cut(s) 1378
TspGWI ACGGA 5 cut(s) 103, 211, 470, 1607, 2293
TspMI CCCGGG 1 cut(s) 960
TspRI CASTG 6 cut(s) 126, 499, 1138, 1732, 2551, 2899
Tth111I GACNNNGTC 1 cut(s) 2919
Vha464I CTTAAG 1 cut(s) 1219
VneI GTGCAC 1 cut(s) 2575
VpaK11BI GGWCC 2 cut(s) 934, 2915
VspI ATTAAT 1 cut(s) 867
XapI RAATTY 8 cut(s) 466, 660, 793, 987, 1257, 1272, 1526, 1633
XceI RCATGY 3 cut(s) 353, 1100, 2389
XhoI CTCGAG 3 cut(s) 1889, 1967, 2003
XmaI CCCGGG 1 cut(s) 960
XmiI GTMKAC 1 cut(s) 582
XmnI GAANNNNTTC 5 cut(s) 95, 598, 807, 885, 1257
XspI CTAG 3 cut(s) 213, 366, 1829
Zsp2I ATGCAT 1 cut(s) 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.