TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF3456 | PF11938 | 25 - 165 | 3.8e-37 | TLR4 regulator and MIR-interacting MSAP |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 206 |
| AccII | CGCG | 2 cut(s) | 20, 98 |
| AciI | CCGC | 2 cut(s) | 81, 98 |
| AclWI | GGATC | 3 cut(s) | 311, 445, 547 |
| AgeI | ACCGGT | 1 cut(s) | 159 |
| AgsI | TTSAA | 3 cut(s) | 230, 288, 363 |
| AluBI | AGCT | 3 cut(s) | 106, 217, 350 |
| AluI | AGCT | 3 cut(s) | 106, 217, 350 |
| Alw21I | GWGCWC | 1 cut(s) | 219 |
| Alw26I | GTCTC | 1 cut(s) | 148 |
| AlwI | GGATC | 3 cut(s) | 311, 445, 547 |
| ApeKI | GCWGC | 1 cut(s) | 495 |
| AsiGI | ACCGGT | 1 cut(s) | 159 |
| AspLEI | GCGC | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 2 cut(s) | 31, 40 |
| BanII | GRGCYC | 1 cut(s) | 219 |
| Bbv12I | GWGCWC | 1 cut(s) | 219 |
| BbvI | GCAGC | 1 cut(s) | 507 |
| BccI | CCATC | 4 cut(s) | 50, 71, 233, 539 |
| BceAI | ACGGC | 1 cut(s) | 77 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 76, 110 |
| BcoDI | GTCTC | 1 cut(s) | 148 |
| BfaI | CTAG | 2 cut(s) | 107, 351 |
| BfmI | CTRYAG | 2 cut(s) | 202, 493 |
| BisI | GCNGC | 2 cut(s) | 81, 496 |
| BlsI | GCNGC | 2 cut(s) | 82, 497 |
| BmsI | GCATC | 1 cut(s) | 246 |
| BpuEI | CTTGAG | 1 cut(s) | 416 |
| BsaJI | CCNNGG | 1 cut(s) | 172 |
| BsaWI | WCCGGW | 1 cut(s) | 159 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 95, 125 |
| Bse118I | RCCGGY | 1 cut(s) | 159 |
| Bse3DI | GCAATG | 1 cut(s) | 94 |
| BseDI | CCNNGG | 1 cut(s) | 172 |
| BseGI | GGATG | 1 cut(s) | 59 |
| BseMI | GCAATG | 1 cut(s) | 94 |
| BseMII | CTCAG | 1 cut(s) | 232 |
| BseRI | GAGGAG | 2 cut(s) | 116, 224 |
| BseXI | GCAGC | 1 cut(s) | 507 |
| Bsh1236I | CGCG | 2 cut(s) | 20, 98 |
| Bsh1285I | CGRYCG | 1 cut(s) | 24 |
| BshTI | ACCGGT | 1 cut(s) | 159 |
| BsiEI | CGRYCG | 1 cut(s) | 24 |
| BsiHKAI | GWGCWC | 1 cut(s) | 219 |
| BsiSI | CCGG | 1 cut(s) | 160 |
| BslFI | GGGAC | 1 cut(s) | 129 |
| BsmAI | GTCTC | 1 cut(s) | 148 |
| BsmFI | GGGAC | 1 cut(s) | 129 |
| Bsp1286I | GDGCHC | 1 cut(s) | 219 |
| Bsp143I | GATC | 3 cut(s) | 303, 437, 539 |
| Bsp68I | TCGCGA | 1 cut(s) | 20 |
| BspACI | CCGC | 2 cut(s) | 81, 98 |
| BspCNI | CTCAG | 1 cut(s) | 231 |
| BspFNI | CGCG | 2 cut(s) | 20, 98 |
| BspMAI | CTGCAG | 1 cut(s) | 497 |
| BspPI | GGATC | 3 cut(s) | 311, 445, 547 |
| BsrDI | GCAATG | 1 cut(s) | 94 |
| BsrFI | RCCGGY | 1 cut(s) | 159 |
| BssAI | RCCGGY | 1 cut(s) | 159 |
| BssECI | CCNNGG | 1 cut(s) | 172 |
| BssMI | GATC | 3 cut(s) | 303, 437, 539 |
| BssT1I | CCWWGG | 1 cut(s) | 172 |
| Bst4CI | ACNGT | 3 cut(s) | 25, 52, 383 |
| Bst6I | CTCTTC | 1 cut(s) | 276 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 492 |
| BstC8I | GCNNGC | 2 cut(s) | 18, 85 |
| BstDEI | CTNAG | 1 cut(s) | 218 |
| BstF5I | GGATG | 1 cut(s) | 59 |
| BstFNI | CGCG | 2 cut(s) | 20, 98 |
| BstHHI | GCGC | 1 cut(s) | 80 |
| BstKTI | GATC | 3 cut(s) | 306, 440, 542 |
| BstMAI | GTCTC | 1 cut(s) | 148 |
| BstMBI | GATC | 3 cut(s) | 303, 437, 539 |
| BstMCI | CGRYCG | 1 cut(s) | 24 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 84, 89, 492 |
| BstSFI | CTRYAG | 2 cut(s) | 202, 493 |
| BstUI | CGCG | 2 cut(s) | 20, 98 |
| BstV1I | GCAGC | 1 cut(s) | 507 |
| BstX2I | RGATCY | 1 cut(s) | 437 |
| BstYI | RGATCY | 1 cut(s) | 437 |
| BtsCI | GGATG | 1 cut(s) | 59 |
| BtsI | GCAGTG | 1 cut(s) | 490 |
| BtsIMutI | CAGTG | 2 cut(s) | 217, 490 |
| BtuMI | TCGCGA | 1 cut(s) | 20 |
| Cac8I | GCNNGC | 2 cut(s) | 18, 85 |
| CfoI | GCGC | 1 cut(s) | 80 |
| Cfr10I | RCCGGY | 1 cut(s) | 159 |
| CspAI | ACCGGT | 1 cut(s) | 159 |
| CviAII | CATG | 1 cut(s) | 515 |
| CviJI | RGCY | 4 cut(s) | 106, 133, 217, 350 |
| CviKI_1 | RGCY | 4 cut(s) | 106, 133, 217, 350 |
| DdeI | CTNAG | 1 cut(s) | 218 |
| DpnI | GATC | 3 cut(s) | 305, 439, 541 |
| DpnII | GATC | 3 cut(s) | 303, 437, 539 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 206 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 206 |
| Eam1104I | CTCTTC | 1 cut(s) | 276 |
| EarI | CTCTTC | 1 cut(s) | 276 |
| Ecl136II | GAGCTC | 1 cut(s) | 217 |
| Eco130I | CCWWGG | 1 cut(s) | 172 |
| Eco24I | GRGCYC | 1 cut(s) | 219 |
| Eco53kI | GAGCTC | 1 cut(s) | 217 |
| EcoICRI | GAGCTC | 1 cut(s) | 217 |
| EcoT14I | CCWWGG | 1 cut(s) | 172 |
| EcoT38I | GRGCYC | 1 cut(s) | 219 |
| ErhI | CCWWGG | 1 cut(s) | 172 |
| FaeI | CATG | 1 cut(s) | 518 |
| FaiI | YATR | 5 cut(s) | 152, 358, 371, 472, 516 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 426, 458 |
| FaqI | GGGAC | 1 cut(s) | 129 |
| FatI | CATG | 1 cut(s) | 514 |
| Fnu4HI | GCNGC | 2 cut(s) | 81, 496 |
| FokI | GGATG | 1 cut(s) | 46 |
| FriOI | GRGCYC | 1 cut(s) | 219 |
| Fsp4HI | GCNGC | 2 cut(s) | 81, 496 |
| FspBI | CTAG | 2 cut(s) | 107, 351 |
| GlaI | GCGC | 1 cut(s) | 79 |
| GluI | GCNGC | 2 cut(s) | 81, 496 |
| HapII | CCGG | 1 cut(s) | 160 |
| HhaI | GCGC | 1 cut(s) | 80 |
| Hin1II | CATG | 1 cut(s) | 518 |
| Hin6I | GCGC | 1 cut(s) | 78 |
| HinP1I | GCGC | 1 cut(s) | 78 |
| HincII | GTYRAC | 1 cut(s) | 179 |
| HindII | GTYRAC | 1 cut(s) | 179 |
| HinfI | GANTC | 4 cut(s) | 28, 167, 207, 284 |
| HpaII | CCGG | 1 cut(s) | 160 |
| HphI | GGTGA | 2 cut(s) | 31, 40 |
| Hpy166II | GTNNAC | 1 cut(s) | 179 |
| Hpy188I | TCNGA | 4 cut(s) | 33, 221, 544, 557 |
| Hpy188III | TCNNGA | 2 cut(s) | 19, 476 |
| Hpy8I | GTNNAC | 1 cut(s) | 179 |
| Hpy99I | CGWCG | 3 cut(s) | 56, 71, 98 |
| HpyAV | CCTTC | 1 cut(s) | 381 |
| HpyCH4III | ACNGT | 3 cut(s) | 25, 52, 383 |
| HpyCH4V | TGCA | 4 cut(s) | 87, 259, 419, 495 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 84, 89, 492 |
| HpyF3I | CTNAG | 1 cut(s) | 218 |
| Hsp92II | CATG | 1 cut(s) | 518 |
| HspAI | GCGC | 1 cut(s) | 78 |
| Kzo9I | GATC | 3 cut(s) | 303, 437, 539 |
| LmnI | GCTCC | 1 cut(s) | 103 |
| LpnPI | CCDG | 4 cut(s) | 97, 148, 173, 245 |
| Lsp1109I | GCAGC | 1 cut(s) | 507 |
| LweI | GCATC | 1 cut(s) | 246 |
| MaeI | CTAG | 2 cut(s) | 107, 351 |
| MaeIII | GTNAC | 1 cut(s) | 390 |
| MalI | GATC | 3 cut(s) | 305, 439, 541 |
| MboI | GATC | 3 cut(s) | 303, 437, 539 |
| MboII | GAAGA | 3 cut(s) | 37, 263, 419 |
| MflI | RGATCY | 1 cut(s) | 437 |
| MhlI | GDGCHC | 1 cut(s) | 219 |
| MluCI | AATT | 2 cut(s) | 316, 422 |
| MlyI | GAGTC | 2 cut(s) | 161, 216 |
| MmeI | TCCRAC | 1 cut(s) | 144 |
| MnlI | CCTC | 6 cut(s) | 94, 179, 245, 338, 391, 511 |
| MspI | CCGG | 1 cut(s) | 160 |
| MvnI | CGCG | 2 cut(s) | 20, 98 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 84, 89, 492 |
| NdeII | GATC | 3 cut(s) | 303, 437, 539 |
| NlaIII | CATG | 1 cut(s) | 518 |
| NruI | TCGCGA | 1 cut(s) | 20 |
| PfeI | GAWTC | 2 cut(s) | 28, 284 |
| PinAI | ACCGGT | 1 cut(s) | 159 |
| PkrI | GCNGC | 2 cut(s) | 82, 497 |
| PleI | GAGTC | 2 cut(s) | 161, 215 |
| PpsI | GAGTC | 2 cut(s) | 161, 215 |
| Psp124BI | GAGCTC | 1 cut(s) | 219 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 450, 482 |
| PstI | CTGCAG | 1 cut(s) | 497 |
| PsuI | RGATCY | 1 cut(s) | 437 |
| RruI | TCGCGA | 1 cut(s) | 20 |
| SacI | GAGCTC | 1 cut(s) | 219 |
| SatI | GCNGC | 2 cut(s) | 81, 496 |
| Sau3AI | GATC | 3 cut(s) | 303, 437, 539 |
| SchI | GAGTC | 2 cut(s) | 161, 216 |
| SduI | GDGCHC | 1 cut(s) | 219 |
| SetI | ASST | 8 cut(s) | 108, 178, 195, 219, 330, 352, 392, 468 |
| SfaNI | GCATC | 1 cut(s) | 246 |
| SfcI | CTRYAG | 2 cut(s) | 202, 493 |
| SmlI | CTYRAG | 1 cut(s) | 395 |
| SmoI | CTYRAG | 1 cut(s) | 395 |
| Sse9I | AATT | 2 cut(s) | 316, 422 |
| SsiI | CCGC | 2 cut(s) | 81, 98 |
| SspMI | CTAG | 2 cut(s) | 107, 351 |
| SstI | GAGCTC | 1 cut(s) | 219 |
| StyI | CCWWGG | 1 cut(s) | 172 |
| TaaI | ACNGT | 3 cut(s) | 25, 52, 383 |
| TaqI | TCGA | 3 cut(s) | 66, 198, 237 |
| TasI | AATT | 2 cut(s) | 316, 422 |
| TauI | GCSGC | 1 cut(s) | 83 |
| TfiI | GAWTC | 2 cut(s) | 28, 284 |
| TscAI | CASTG | 2 cut(s) | 217, 497 |
| TseI | GCWGC | 1 cut(s) | 495 |
| TspDTI | ATGAA | 1 cut(s) | 48 |
| TspGWI | ACGGA | 1 cut(s) | 196 |
| TspRI | CASTG | 2 cut(s) | 217, 497 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 142 |
| XspI | CTAG | 2 cut(s) | 107, 351 |