pycom10g02790

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
3123009 .. 3126510
3502 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g02790.4

Sequence Viewer

Length: 2157 bp
ATGTTCTCAAAGGGGTATGCGGAGTCCAGATGGTGTCTTGACGAGCTGGTGGAGATCATGGAGTGCAGAAAAACACTGGGTCAACTTGTTTTTCCGATTTTCTTCGATGTTGCTCCTTCAGATGTCAGGCATCAGACTGGTAGTTTTGAAACCGCGTTTCGGAACCATCGACAAAGGTTTGAGGTTGAAAAAGTCCGGCAGTGGAGCAATGCTCTCCAAGAAGCTGCAAACTTGAACGGCAAGGATTTTTCAGAGACTGACAGGTATGAAGCAGAGTTTATCACGGAAGTTGCCCGCCAGATCACTAGACAACTGAAGAAACCACGCCTTCATGTAGCCAAGTATAAAGTTGGAATAGATTCTCGCGTGCAAAAAATCAGTAATTATTTAAATGTTGGAGGATCAGAGGGTGTTCGCATAATTGGAATTTGGGGGATGGGCGGACTAGGTAAGTCCACGATCGCAAAAGCTATTTTCAACAAATACTACTACGAGTTTGATGGTGCATGTTTTCTTGAAAATGTGAGAGAAGATAAGAAACTGGTTAATTCGCAAAACAGACTTCTGTATGATGTTTTGGGACCGGGCCACATAAAGGTGCATATGGCCGATGAAGGGACCGAGGAGATAAAAAGAAAACTTTGCAACAAAAGCGTTCTTGTCATAGTTGATGATATAGACTCTGTGTCACAGATAGATACATTAGCTATAAGACATGACTCGTTTGGTCCAGGAAGTAGAATTGTTATAACAACAAGAGATAAACATTTGTTACAGATACCTGGAGTGGTGGATGAGGTATGTTCTCTGCCGGCAATGAATAACGATGAAGCTCTTGAGCTCCTTAGTTGGCGTGCCTTTGGAAAGAGTTCTCCTAATGAAGGATATCTCGAAGTCTCAAGAGAAGCTGTTGATTATTGTGGGGGTTTACCATTGGCACTTGAAGCCGTAGGTTCTTACCTATGTAAAAGAGACACAGAGAGATGGACAAGTGCACTGGAGAAATGGAATGAATCACAGCATAATCCGAAAATTCACGAAATTCTTAAGATAAGTTATGACGGGCTTAAGGATAGCGAGTGGGAGGATATATTCCTTGATATATCCTGTTTCTGTACTGGAATGGACAAGGACCGTGTCATGGCAATATTGAATGGGTGTTACCCTGATCCAGCAACAGGTATTGAAGTACTCCAGCAGCGATGCCTTGTAACTGATGATCCAAATGGCAATCTGATGATGATGCACCGTTTGATTCGGGACATGGGCAGAGAAATCGTACGTGCTAAATCCCCTAAGAAGCTTGAAAGTCGTTGTAGATTGTGGAATCATCGAGATGTAATAAAAGTATTGAGGAAAAAACATGGAACGGTAGAAATCGAAGGAATCGCTTCAGATTCTCCAGAATCTGACATGCTTAGCTTCGATACAGAAATATTCACAGATATGTCGAAACTGAGATTACTCAATATAAAAGGCGTAAAGATCACTGGAGAATGCAAAGATCTTCCCGAAGAGTTAAGATGGTTAAGTTTGTCTTACTTTCCTCTGCAGGTGCAGTTTAATCAACCAAACTTAGTTGACATCGACCTGAGTGGTAGCAATATAGAACTCTGGAATGACAACGTGTCACTTGAAAAGTTGAAGTCTCTCAATCTTGGTTATTGTGCTCAACTGAAACAGTCACCAGACTTTTCAAGAATCCCAAATATTGAGATATTGATACTCGAAGCCTGTAAGAGTTTGTCAAAGATTCACCACTCTGTTATACTATTGAAGAACCTTAAGTATTTTTCTGTTGATCATTGCAAAAGCCTTCAGGAAATTCCAAATATACCAACAAATTTGGAAATCCTGAAAGCCAATGAGTGCATCGCATTGGGAAATATGCCAGATTTTTCAGCAATGAAGAGAATGAAAGAACTGCATCTGAATCACTCCCCCAAGCTCACTAAAATTCCAGGCTTGCGTAGTTCATTACACTCCATGAAAAGGATTCGTATGGAAGGGTGTACCAATCTCACTGCTGCTTTTAAAAATGAAATCCTACAGGGAATGAGCGCGAACAGAAATGGTGTTCTTTTTCCTCCCGAAATAGGGGTTTACCTGGAGCAGGAAAATTTAGTCAATCAATTTTCCAGTCTTACGACACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

719

Amino Acids

81.65

Weight (kDa)

6.55

Isoelectric Point (pI)

48.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 749
AarI CACCTGC 1 cut(s) 1543
Acc36I ACCTGC 1 cut(s) 1543
AccII CGCG 3 cut(s) 155, 366, 2063
AciI CCGC 4 cut(s) 20, 153, 295, 441
AclWI GGATC 3 cut(s) 409, 1163, 1214
AcoI YGGCCR 1 cut(s) 606
AcsI RAATTY 7 cut(s) 426, 1032, 1041, 1824, 1843, 1956, 2119
AcuI CTGAAG 4 cut(s) 102, 335, 1377, 1802
AfaI GTAC 4 cut(s) 1117, 1191, 1281, 2014
AflII CTTAAG 3 cut(s) 1046, 1067, 1784
AflIII ACRYGT 2 cut(s) 1626, 2150
AhdI GACNNNNNGTC 2 cut(s) 685, 1627
AjnI CCWGG 4 cut(s) 730, 781, 1960, 2106
Alw21I GWGCWC 3 cut(s) 843, 997, 1672
Alw26I GTCTC 4 cut(s) 248, 901, 966, 1653
Alw44I GTGCAC 1 cut(s) 993
AlwI GGATC 3 cut(s) 409, 1163, 1214
AlwNI CAGNNNCTG 2 cut(s) 257, 1409
AoxI GGCC 2 cut(s) 586, 606
ApaLI GTGCAC 1 cut(s) 993
ApeKI GCWGC 3 cut(s) 224, 1198, 2027
ApoI RAATTY 7 cut(s) 426, 1032, 1041, 1824, 1843, 1956, 2119
Asp700I GAANNNNTTC 3 cut(s) 358, 868, 1390
AspLEI GCGC 1 cut(s) 2063
AspS9I GGNCC 5 cut(s) 581, 586, 618, 728, 1132
AsuC2I CCSGG 1 cut(s) 585
AsuHPI GGTGA 2 cut(s) 1677, 1748
AvaII GGWCC 4 cut(s) 581, 618, 728, 1132
BaeGI GKGCMC 1 cut(s) 997
BanII GRGCYC 1 cut(s) 843
Bbv12I GWGCWC 3 cut(s) 843, 997, 1672
BbvI GCAGC 3 cut(s) 211, 1210, 2014
BccI CCATC 6 cut(s) 24, 174, 430, 494, 978, 1518
BceAI ACGGC 2 cut(s) 253, 932
BcgI CGANNNNNNTGC 2 cut(s) 1258, 1292
BciT130I CCWGG 4 cut(s) 732, 783, 1962, 2108
BclI TGATCA 1 cut(s) 1801
BcnI CCSGG 1 cut(s) 585
BcoDI GTCTC 4 cut(s) 248, 901, 966, 1653
BfaI CTAG 2 cut(s) 306, 446
BfmI CTRYAG 2 cut(s) 1550, 2048
BfrI CTTAAG 3 cut(s) 1046, 1067, 1784
BfuAI ACCTGC 1 cut(s) 1543
BglII AGATCT 1 cut(s) 1504
BisI GCNGC 3 cut(s) 225, 1199, 2028
BlpI GCTNAGC 1 cut(s) 1418
BlsI GCNGC 3 cut(s) 226, 1200, 2029
BmcAI AGTACT 1 cut(s) 1191
Bme1390I CCNGG 5 cut(s) 585, 732, 783, 1962, 2108
Bme18I GGWCC 4 cut(s) 581, 618, 728, 1132
BmeRI GACNNNNNGTC 2 cut(s) 685, 1627
BmgT120I GGNCC 5 cut(s) 581, 586, 618, 728, 1132
BmiI GGNNCC 3 cut(s) 164, 582, 619
BmrFI CCNGG 5 cut(s) 585, 732, 783, 1962, 2108
BmrI ACTGGG 1 cut(s) 86
BmsI GCATC 5 cut(s) 139, 1193, 1233, 1881, 1936
BmuI ACTGGG 1 cut(s) 86
BplI GAGNNNNNCTC 2 cut(s) 196, 228
BpmI CTGGAG 6 cut(s) 804, 1019, 1178, 1386, 1512, 2129
Bpu1102I GCTNAGC 1 cut(s) 1418
BpuEI CTTGAG 2 cut(s) 857, 883
BpuMI CCSGG 1 cut(s) 585
BsaAI YACGTR 1 cut(s) 1283
BsaJI CCNNGG 1 cut(s) 621
Bse118I RCCGGY 1 cut(s) 811
Bse1I ACTGG 7 cut(s) 81, 142, 546, 1002, 1123, 1495, 2139
Bse3DI GCAATG 4 cut(s) 214, 822, 1804, 1911
BseBI CCWGG 4 cut(s) 732, 783, 1962, 2108
BseDI CCNNGG 1 cut(s) 621
BseGI GGATG 2 cut(s) 441, 799
BseMI GCAATG 4 cut(s) 214, 822, 1804, 1911
BseMII CTCAG 2 cut(s) 1448, 1583
BseNI ACTGG 7 cut(s) 81, 142, 546, 1002, 1123, 1495, 2139
BseRI GAGGAG 1 cut(s) 638
BseSI GKGCMC 1 cut(s) 997
BseXI GCAGC 3 cut(s) 211, 1210, 2014
BsgI GTGCAG 2 cut(s) 85, 1577
Bsh1236I CGCG 3 cut(s) 155, 366, 2063
Bsh1285I CGRYCG 1 cut(s) 462
BshFI GGCC 2 cut(s) 588, 608
BsiEI CGRYCG 1 cut(s) 462
BsiHKAI GWGCWC 3 cut(s) 843, 997, 1672
BsiSI CCGG 3 cut(s) 196, 584, 812
BsiWI CGTACG 1 cut(s) 1279
BslFI GGGAC 3 cut(s) 594, 631, 1274
BsmAI GTCTC 4 cut(s) 248, 901, 966, 1653
BsmFI GGGAC 3 cut(s) 594, 631, 1274
BsmI GAATGC 1 cut(s) 1502
BsnI GGCC 2 cut(s) 588, 608
Bsp1286I GDGCHC 3 cut(s) 843, 997, 1672
Bsp143I GATC 9 cut(s) 54, 300, 401, 459, 1168, 1219, 1485, 1504, 1801
Bsp1720I GCTNAGC 1 cut(s) 1418
BspACI CCGC 4 cut(s) 20, 153, 295, 441
BspANI GGCC 2 cut(s) 588, 608
BspCNI CTCAG 2 cut(s) 1449, 1584
BspFNI CGCG 3 cut(s) 155, 366, 2063
BspLI GGNNCC 3 cut(s) 164, 582, 619
BspMAI CTGCAG 1 cut(s) 1554
BspMI ACCTGC 1 cut(s) 1543
BspPI GGATC 3 cut(s) 409, 1163, 1214
BspTI CTTAAG 3 cut(s) 1046, 1067, 1784
BsrDI GCAATG 4 cut(s) 214, 822, 1804, 1911
BsrFI RCCGGY 1 cut(s) 811
BsrI ACTGG 7 cut(s) 81, 142, 546, 1002, 1123, 1495, 2139
BssAI RCCGGY 1 cut(s) 811
BssECI CCNNGG 1 cut(s) 621
BssMI GATC 9 cut(s) 54, 300, 401, 459, 1168, 1219, 1485, 1504, 1801
Bst2UI CCWGG 4 cut(s) 732, 783, 1962, 2108
Bst4CI ACNGT 4 cut(s) 1136, 1250, 1372, 1683
Bst6I CTCTTC 2 cut(s) 1509, 1904
BstAFI CTTAAG 3 cut(s) 1046, 1067, 1784
BstBAI YACGTR 1 cut(s) 1283
BstC8I GCNNGC 5 cut(s) 295, 368, 813, 855, 1967
BstDEI CTNAG 6 cut(s) 845, 1296, 1418, 1457, 1576, 1592
BstENI CCTNNNNNAGG 2 cut(s) 879, 2111
BstF5I GGATG 2 cut(s) 441, 799
BstFNI CGCG 3 cut(s) 155, 366, 2063
BstHHI GCGC 1 cut(s) 2063
BstKTI GATC 9 cut(s) 57, 303, 404, 462, 1171, 1222, 1488, 1507, 1804
BstMAI GTCTC 4 cut(s) 248, 901, 966, 1653
BstMBI GATC 9 cut(s) 54, 300, 401, 459, 1168, 1219, 1485, 1504, 1801
BstMCI CGRYCG 1 cut(s) 462
BstMWI GCNNNNNNNGC 2 cut(s) 651, 944
BstNI CCWGG 4 cut(s) 732, 783, 1962, 2108
BstNSI RCATGY 2 cut(s) 510, 1417
BstSCI CCNGG 5 cut(s) 583, 730, 781, 1960, 2106
BstSFI CTRYAG 2 cut(s) 1550, 2048
BstSLI GKGCMC 1 cut(s) 997
BstUI CGCG 3 cut(s) 155, 366, 2063
BstV1I GCAGC 3 cut(s) 211, 1210, 2014
BstX2I RGATCY 1 cut(s) 1504
BstYI RGATCY 1 cut(s) 1504
BsuRI GGCC 2 cut(s) 588, 608
BtgZI GCGATG 2 cut(s) 1216, 1858
BtsCI GGATG 2 cut(s) 441, 799
BtsI GCAGTG 2 cut(s) 206, 2022
BtsIMutI CAGTG 5 cut(s) 74, 206, 995, 1488, 2022
BveI ACCTGC 1 cut(s) 1543
Cac8I GCNNGC 5 cut(s) 295, 368, 813, 855, 1967
CaiI CAGNNNCTG 2 cut(s) 257, 1409
CfoI GCGC 1 cut(s) 2063
Cfr10I RCCGGY 1 cut(s) 811
Cfr13I GGNCC 5 cut(s) 581, 586, 618, 728, 1132
Csp6I GTAC 4 cut(s) 1116, 1190, 1280, 2013
CviAII CATG 9 cut(s) 58, 332, 507, 716, 1141, 1264, 1364, 1414, 1987
CviQI GTAC 4 cut(s) 1116, 1190, 1280, 2013
DdeI CTNAG 6 cut(s) 845, 1296, 1418, 1457, 1576, 1592
DpnI GATC 9 cut(s) 56, 302, 403, 461, 1170, 1221, 1487, 1506, 1803
DpnII GATC 9 cut(s) 54, 300, 401, 459, 1168, 1219, 1485, 1504, 1801
DraI TTTAAA 2 cut(s) 390, 2035
DriI GACNNNNNGTC 2 cut(s) 685, 1627
EaeI YGGCCR 1 cut(s) 606
Eam1104I CTCTTC 2 cut(s) 1509, 1904
Eam1105I GACNNNNNGTC 2 cut(s) 685, 1627
EarI CTCTTC 2 cut(s) 1509, 1904
EciI GGCGGA 1 cut(s) 456
Ecl136II GAGCTC 1 cut(s) 841
Eco24I GRGCYC 1 cut(s) 843
Eco32I GATATC 1 cut(s) 887
Eco47I GGWCC 4 cut(s) 581, 618, 728, 1132
Eco53kI GAGCTC 1 cut(s) 841
Eco57I CTGAAG 4 cut(s) 102, 335, 1377, 1802
EcoICRI GAGCTC 1 cut(s) 841
EcoNI CCTNNNNNAGG 2 cut(s) 879, 2111
EcoRII CCWGG 4 cut(s) 730, 781, 1960, 2106
EcoRV GATATC 1 cut(s) 887
EcoT38I GRGCYC 1 cut(s) 843
FaeI CATG 9 cut(s) 61, 335, 510, 719, 1144, 1267, 1367, 1417, 1990
FalI AAGNNNNNCTT 2 cut(s) 1522, 1554
FaqI GGGAC 3 cut(s) 594, 631, 1274
FatI CATG 9 cut(s) 57, 331, 506, 715, 1140, 1263, 1363, 1413, 1986
FauI CCCGC 1 cut(s) 302
FauNDI CATATG 1 cut(s) 603
FbaI TGATCA 1 cut(s) 1801
Fnu4HI GCNGC 3 cut(s) 225, 1199, 2028
FokI GGATG 2 cut(s) 448, 806
FriOI GRGCYC 1 cut(s) 843
Fsp4HI GCNGC 3 cut(s) 225, 1199, 2028
FspBI CTAG 2 cut(s) 306, 446
GlaI GCGC 1 cut(s) 2062
GluI GCNGC 3 cut(s) 225, 1199, 2028
GsuI CTGGAG 6 cut(s) 804, 1019, 1178, 1386, 1512, 2129
HaeIII GGCC 2 cut(s) 588, 608
HapII CCGG 3 cut(s) 196, 584, 812
HhaI GCGC 1 cut(s) 2063
Hin1II CATG 9 cut(s) 61, 335, 510, 719, 1144, 1267, 1367, 1417, 1990
Hin6I GCGC 1 cut(s) 2061
HinP1I GCGC 1 cut(s) 2061
HincII GTYRAC 2 cut(s) 83, 1582
HindII GTYRAC 2 cut(s) 83, 1582
HindIII AAGCTT 1 cut(s) 1301
HpaII CCGG 3 cut(s) 196, 584, 812
HphI GGTGA 2 cut(s) 1677, 1748
Hpy166II GTNNAC 7 cut(s) 83, 456, 929, 995, 1582, 2013, 2104
Hpy8I GTNNAC 7 cut(s) 83, 456, 929, 995, 1582, 2013, 2104
HpyAV CCTTC 7 cut(s) 126, 338, 608, 875, 1376, 1826, 2000
HpyCH4III ACNGT 4 cut(s) 1136, 1250, 1372, 1683
HpyCH4IV ACGT 3 cut(s) 1282, 1626, 2152
HpyF10VI GCNNNNNNNGC 2 cut(s) 651, 944
HpyF3I CTNAG 6 cut(s) 845, 1296, 1418, 1457, 1576, 1592
HpySE526I ACGT 3 cut(s) 1282, 1626, 2152
Hsp92II CATG 9 cut(s) 61, 335, 510, 719, 1144, 1267, 1367, 1417, 1990
HspAI GCGC 1 cut(s) 2061
KroI GCCGGC 1 cut(s) 811
KroNI GCCGGC 1 cut(s) 813
Ksp22I TGATCA 1 cut(s) 1801
Kzo9I GATC 9 cut(s) 54, 300, 401, 459, 1168, 1219, 1485, 1504, 1801
LmnI GCTCC 4 cut(s) 118, 204, 846, 2110
Lsp1109I GCAGC 3 cut(s) 211, 1210, 2014
LweI GCATC 5 cut(s) 139, 1193, 1233, 1881, 1936
MaeI CTAG 2 cut(s) 306, 446
MaeII ACGT 3 cut(s) 1282, 1626, 2152
MaeIII GTNAC 6 cut(s) 687, 771, 1160, 1210, 1629, 1683
MalI GATC 9 cut(s) 56, 302, 403, 461, 1170, 1221, 1487, 1506, 1803
MboI GATC 9 cut(s) 54, 300, 401, 459, 1168, 1219, 1485, 1504, 1801
MboII GAAGA 7 cut(s) 94, 328, 542, 1499, 1526, 1789, 1921
MflI RGATCY 1 cut(s) 1504
MhlI GDGCHC 3 cut(s) 843, 997, 1672
MlyI GAGTC 3 cut(s) 32, 674, 713
MmeI TCCRAC 2 cut(s) 331, 376
MnlI CCTC 9 cut(s) 175, 392, 400, 616, 790, 1078, 1347, 1557, 2097
MroNI GCCGGC 1 cut(s) 811
MroXI GAANNNNTTC 3 cut(s) 358, 868, 1390
MseI TTAA 9 cut(s) 389, 546, 1047, 1068, 1520, 1529, 1563, 1785, 2034
MslI CAYNNNNRTG 3 cut(s) 596, 1335, 1445
MspCI CTTAAG 3 cut(s) 1046, 1067, 1784
MspI CCGG 3 cut(s) 196, 584, 812
MspR9I CCNGG 5 cut(s) 585, 732, 783, 1962, 2108
Mva1269I GAATGC 1 cut(s) 1502
MvaI CCWGG 4 cut(s) 732, 783, 1962, 2108
MvnI CGCG 3 cut(s) 155, 366, 2063
MwoI GCNNNNNNNGC 2 cut(s) 651, 944
NaeI GCCGGC 1 cut(s) 813
NciI CCSGG 1 cut(s) 585
NdeI CATATG 1 cut(s) 603
NdeII GATC 9 cut(s) 54, 300, 401, 459, 1168, 1219, 1485, 1504, 1801
NgoMIV GCCGGC 1 cut(s) 811
NlaIII CATG 9 cut(s) 61, 335, 510, 719, 1144, 1267, 1367, 1417, 1990
NlaIV GGNNCC 3 cut(s) 164, 582, 619
NmuCI GTSAC 3 cut(s) 687, 1629, 1683
NspI RCATGY 2 cut(s) 510, 1417
PaqCI CACCTGC 1 cut(s) 1543
PcsI WCGNNNNNNNCGW 1 cut(s) 166
PctI GAATGC 1 cut(s) 1502
PdiI GCCGGC 1 cut(s) 813
PdmI GAANNNNTTC 3 cut(s) 358, 868, 1390
Pfl23II CGTACG 1 cut(s) 1279
PflFI GACNNNGTC 1 cut(s) 1136
PfoI TCCNGGA 1 cut(s) 730
PkrI GCNGC 3 cut(s) 226, 1200, 2029
Ple19I CGATCG 1 cut(s) 462
PleI GAGTC 3 cut(s) 31, 674, 713
PpsI GAGTC 3 cut(s) 31, 674, 713
Ppu21I YACGTR 1 cut(s) 1283
PsiI TTATAA 1 cut(s) 749
Psp124BI GAGCTC 1 cut(s) 843
Psp6I CCWGG 4 cut(s) 730, 781, 1960, 2106
PspGI CCWGG 4 cut(s) 730, 781, 1960, 2106
PspLI CGTACG 1 cut(s) 1279
PspN4I GGNNCC 3 cut(s) 164, 582, 619
PspPI GGNCC 5 cut(s) 581, 586, 618, 728, 1132
PstI CTGCAG 1 cut(s) 1554
PstNI CAGNNNCTG 2 cut(s) 257, 1409
PsuI RGATCY 1 cut(s) 1504
PsyI GACNNNGTC 1 cut(s) 1136
PvuI CGATCG 1 cut(s) 462
RsaI GTAC 4 cut(s) 1117, 1191, 1281, 2014
RsaNI GTAC 4 cut(s) 1116, 1190, 1280, 2013
RseI CAYNNNNRTG 3 cut(s) 596, 1335, 1445
SacI GAGCTC 1 cut(s) 843
SaqAI TTAA 9 cut(s) 389, 546, 1047, 1068, 1520, 1529, 1563, 1785, 2034
SatI GCNGC 3 cut(s) 225, 1199, 2028
Sau3AI GATC 9 cut(s) 54, 300, 401, 459, 1168, 1219, 1485, 1504, 1801
Sau96I GGNCC 5 cut(s) 581, 586, 618, 728, 1132
ScaI AGTACT 1 cut(s) 1191
SchI GAGTC 3 cut(s) 32, 674, 713
ScrFI CCNGG 5 cut(s) 585, 732, 783, 1962, 2108
SduI GDGCHC 3 cut(s) 843, 997, 1672
SfaNI GCATC 5 cut(s) 139, 1193, 1233, 1881, 1936
SfcI CTRYAG 2 cut(s) 1550, 2048
SinI GGWCC 4 cut(s) 581, 618, 728, 1132
SmiI ATTTAAAT 1 cut(s) 390
SmiMI CAYNNNNRTG 3 cut(s) 596, 1335, 1445
SmlI CTYRAG 5 cut(s) 836, 898, 1046, 1067, 1784
SmoI CTYRAG 5 cut(s) 836, 898, 1046, 1067, 1784
SsiI CCGC 4 cut(s) 20, 153, 295, 441
SspI AATATT 3 cut(s) 1149, 1437, 1711
SspMI CTAG 2 cut(s) 306, 446
SstI GAGCTC 1 cut(s) 843
StyD4I CCNGG 5 cut(s) 583, 730, 781, 1960, 2106
SwaI ATTTAAAT 1 cut(s) 390
TaaI ACNGT 4 cut(s) 1136, 1250, 1372, 1683
TaiI ACGT 3 cut(s) 1285, 1629, 2155
TaqI TCGA 9 cut(s) 105, 169, 891, 1333, 1380, 1425, 1451, 1587, 1728
TaqII GACCGA 1 cut(s) 635
TatI WGTACW 2 cut(s) 1115, 1189
Tru1I TTAA 9 cut(s) 389, 546, 1047, 1068, 1520, 1529, 1563, 1785, 2034
Tru9I TTAA 9 cut(s) 389, 546, 1047, 1068, 1520, 1529, 1563, 1785, 2034
TscAI CASTG 5 cut(s) 81, 206, 1002, 1495, 2029
TseFI GTSAC 3 cut(s) 687, 1629, 1683
TseI GCWGC 3 cut(s) 224, 1198, 2027
Tsp45I GTSAC 3 cut(s) 687, 1629, 1683
TspGWI ACGGA 1 cut(s) 299
TspRI CASTG 5 cut(s) 81, 206, 1002, 1495, 2029
Tth111I GACNNNGTC 1 cut(s) 1136
Vha464I CTTAAG 3 cut(s) 1046, 1067, 1784
VneI GTGCAC 1 cut(s) 993
VpaK11BI GGWCC 4 cut(s) 581, 618, 728, 1132
XagI CCTNNNNNAGG 2 cut(s) 879, 2111
XapI RAATTY 7 cut(s) 426, 1032, 1041, 1824, 1843, 1956, 2119
XceI RCATGY 2 cut(s) 510, 1417
XmnI GAANNNNTTC 3 cut(s) 358, 868, 1390
XspI CTAG 2 cut(s) 306, 446
ZrmI AGTACT 1 cut(s) 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.