MD00G1220000.v1.1

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
51891573 .. 51894439
2867 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1220000.v1.1.491

Sequence Viewer

Length: 1782 bp
ATGCATGATTTGCTTCGAGAAATGGCCAAAGTAATCATATCTGGAAATTCCCGTCGTCCCCCTGGAGAATGGAGCAGGTTGTGGATCCCTGGAGATGTCTATGATGTACTAACAAATAAATCTGGAACCAAAGAAGTTGAAGGACTTGTTGTAGGTTTCCCTGATCTTCTGTCTCCAAGTATCAGTACAGAAGCATTTGCCGATACGTGGCAACTGATACTGTTCCAGCGCATTAAAGTGCAGCTCCATGGAGAATTCCCTTTAAAGTCTAGTTGTATCAGTACAGAAGCATTTGCTAATATGAAGAAACTGAGACTGCTCATGCTCAAGAACGTGCAGCTCAATGGAGAATACAAACATCTCCCCAAAGAGTTAATATGGTTGTGTTGGGAAGGATGCCCTTTAAAGTCCATACCAGATGACTTCTTTGATCAACCAAGAGCACTAGTTATTTTAGAGATAACGCACAGCAGACTGGTACAAGTTTGGGAGGGCTCCAAGTTGCTTGAAAACTTGAAAATCCTTAATCTCAGTGTTTGCCTTGACTTAAAAAAATCACCAGACTTATCAAATCTCCCAAGTCTTGAAGAGTTGATATTGGAATGGTGTGAGAGTTTGTCCGAGATTCACCCCTCCATTGGTCATCTTAAAAAACTTTCTTTGGTGAACCTCACAGGCTGCAAGAATCTTATTTCTCTTCCTGGGGATTTCTACAGGTCCAAATCCGTTCAGACTCTTGTTCTTGATTTTTGTGGGCAATTCAGTGAACTGTCCGAGGATTTAGGGAATATAATATCATTGAGAGTACTTAAAGCATCTGAGACAGCCATAATACAAGTACCGCGTTCCACAGTAAGATTGAAGAATCTCACTCATTTATCTCTAATTGGGGGTCTTCCTTCCAGAAGAGCCAAATTTGCATTGCAAATTCGCGATTTGTTACAGGGCTTTGACTCTTTAAGAAATTTAGATCTCTTATTCCAGAGGTTAAGCGATGATCCATTATCAAAGGGTTTTGGGAGTCTAATTTCTTTACAAGATTTAGATCTCTCATCTAATGATTTTCATACCCTACCCAGCCTCAGTGATCTTTCAAAGCTTGAAAGTTTGCGGTTAGATTACTGCCTTAACCTTCATACAATCTATGGTTTACCAACAAATTTGAAATTTCTGTATGCGTCTTGTTGCCATCGTTTGTTAACAATGCCCAATTTTTCGAAAATGTCCAATATGAGGGAACTGAATGTACGTGATTCACGCGCACTCACTGAGATTCCAGACTTGGATAAGTCATTAAACTCCATGACATGGATTGATATGACGGATTGCGCCGAACTCACCGCTGATTTTATGAGGAAAGTCCTAAAGGGATGGACTTCTTGCGGATATGGTGGCATTTTTTTCAAAGGGAATTATGTTCCTGATTGGTTCGAGTTTGTCAACGATGGTAATAAAGTCAGTTTTGATATCCTCCCGAGTGATGGTCGTAATTTTGAAGGGCTGACTCTGTTATGCTTTTACTGCTTTATTCCTAAATATTCAATTCATAGCAAACCTTATTTCACATGCAAAGATGGTCATCCTCGTGCCAGTATTGATATAAATAATACCAAGCGTACTGAGTTGCAGACCTGCATAGGCAAGGAAGATTGGGTTATAAAAATGCACAATGTATCTGGAAAATGTTTTCTTTGGCAGGGACAAATATCGAACGATAAGCTCAATTTGCAAAGCGGGGATAAAGTTGATATAACTTTTGAAACAGTACATCTGATAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

594

Amino Acids

67.32

Weight (kDa)

6.55

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1658
Acc36I ACCTGC 2 cut(s) 66, 1640
AccB7I CCANNNNNTGG 1 cut(s) 1308
AccII CGCG 3 cut(s) 844, 933, 1260
AciI CCGC 5 cut(s) 842, 1111, 1341, 1383, 1734
AclWI GGATC 3 cut(s) 79, 92, 992
AcoI YGGCCR 1 cut(s) 24
AcsI RAATTY 7 cut(s) 46, 254, 914, 927, 964, 1159, 1166
AfaI GTAC 9 cut(s) 108, 187, 283, 480, 807, 840, 1248, 1618, 1767
AfiI CCNNNNNNNGG 5 cut(s) 207, 638, 1233, 1308, 1481
AhlI ACTAGT 1 cut(s) 445
AjnI CCWGG 3 cut(s) 61, 88, 700
AluBI AGCT 4 cut(s) 244, 340, 1099, 1720
AluI AGCT 4 cut(s) 244, 340, 1099, 1720
Alw21I GWGCWC 1 cut(s) 445
Alw26I GTCTC 3 cut(s) 177, 307, 815
AlwI GGATC 3 cut(s) 79, 92, 992
Ama87I CYCGRG 1 cut(s) 1474
AoxI GGCC 1 cut(s) 24
ApeKI GCWGC 3 cut(s) 241, 337, 678
ApoI RAATTY 7 cut(s) 46, 254, 914, 927, 964, 1159, 1166
AspLEI GCGC 3 cut(s) 231, 1262, 1331
AspS9I GGNCC 1 cut(s) 717
AsuHPI GGTGA 4 cut(s) 549, 620, 676, 1330
AsuII TTCGAA 1 cut(s) 1217
AvaI CYCGRG 1 cut(s) 1474
AvaII GGWCC 1 cut(s) 717
BalI TGGCCA 1 cut(s) 26
BamHI GGATCC 1 cut(s) 84
BanII GRGCYC 1 cut(s) 497
BauI CACGAG 1 cut(s) 1584
BbsI GAAGAC 1 cut(s) 887
Bbv12I GWGCWC 1 cut(s) 445
BbvI GCAGC 3 cut(s) 253, 349, 665
BccI CCATC 5 cut(s) 1197, 1365, 1439, 1475, 1568
BciT130I CCWGG 3 cut(s) 63, 90, 702
BclI TGATCA 1 cut(s) 430
BcoDI GTCTC 3 cut(s) 177, 307, 815
BcuI ACTAGT 1 cut(s) 445
BfaI CTAG 2 cut(s) 270, 446
BfmI CTRYAG 1 cut(s) 712
BfuAI ACCTGC 2 cut(s) 66, 1640
BglII AGATCT 2 cut(s) 970, 1045
BisI GCNGC 3 cut(s) 242, 338, 679
BlsI GCNGC 3 cut(s) 243, 339, 680
BmcAI AGTACT 1 cut(s) 807
Bme1390I CCNGG 3 cut(s) 63, 90, 702
Bme18I GGWCC 1 cut(s) 717
BmeT110I CYCGRG 1 cut(s) 1474
BmgT120I GGNCC 1 cut(s) 717
BmiI GGNNCC 3 cut(s) 86, 127, 496
BmrFI CCNGG 3 cut(s) 63, 90, 702
BmsI GCATC 2 cut(s) 386, 824
BpiI GAAGAC 1 cut(s) 887
BpmI CTGGAG 2 cut(s) 84, 111
Bpu14I TTCGAA 1 cut(s) 1217
BpuEI CTTGAG 1 cut(s) 311
BsaAI YACGTR 2 cut(s) 207, 1250
BsaBI GATNNNNATC 2 cut(s) 1044, 1578
BsaJI CCNNGG 5 cut(s) 61, 88, 247, 701, 774
Bsc4I CCNNNNNNNGG 5 cut(s) 207, 638, 1233, 1308, 1481
Bse1I ACTGG 2 cut(s) 480, 1590
Bse3DI GCAATG 1 cut(s) 920
Bse8I GATNNNNATC 2 cut(s) 1044, 1578
BseBI CCWGG 3 cut(s) 63, 90, 702
BseDI CCNNGG 5 cut(s) 61, 88, 247, 701, 774
BseGI GGATG 3 cut(s) 401, 1376, 1579
BseJI GATNNNNATC 2 cut(s) 1044, 1578
BseLI CCNNNNNNNGG 5 cut(s) 207, 638, 1233, 1308, 1481
BseMI GCAATG 1 cut(s) 920
BseMII CTCAG 6 cut(s) 302, 544, 810, 1096, 1260, 1611
BseNI ACTGG 2 cut(s) 480, 1590
BseXI GCAGC 3 cut(s) 253, 349, 665
BseYI CCCAGC 1 cut(s) 1076
BsgI GTGCAG 2 cut(s) 260, 356
Bsh1236I CGCG 3 cut(s) 844, 933, 1260
BshFI GGCC 1 cut(s) 26
BsiHKAI GWGCWC 1 cut(s) 445
BsiHKCI CYCGRG 1 cut(s) 1474
BslFI GGGAC 2 cut(s) 42, 1713
BslI CCNNNNNNNGG 5 cut(s) 207, 638, 1233, 1308, 1481
BsmAI GTCTC 3 cut(s) 177, 307, 815
BsmFI GGGAC 2 cut(s) 42, 1713
BsnI GGCC 1 cut(s) 26
BsoBI CYCGRG 1 cut(s) 1474
Bsp119I TTCGAA 1 cut(s) 1217
Bsp1286I GDGCHC 2 cut(s) 445, 497
Bsp143I GATC 7 cut(s) 84, 163, 430, 970, 997, 1045, 1087
Bsp19I CCATGG 1 cut(s) 247
Bsp68I TCGCGA 1 cut(s) 933
BspACI CCGC 5 cut(s) 842, 1111, 1341, 1383, 1734
BspANI GGCC 1 cut(s) 26
BspCNI CTCAG 6 cut(s) 303, 543, 811, 1095, 1261, 1612
BspFNI CGCG 3 cut(s) 844, 933, 1260
BspLI GGNNCC 3 cut(s) 86, 127, 496
BspMI ACCTGC 2 cut(s) 66, 1640
BspPI GGATC 3 cut(s) 79, 92, 992
BspQI GCTCTTC 1 cut(s) 901
BspT104I TTCGAA 1 cut(s) 1217
BsrDI GCAATG 1 cut(s) 920
BsrI ACTGG 2 cut(s) 480, 1590
BssECI CCNNGG 5 cut(s) 61, 88, 247, 701, 774
BssMI GATC 7 cut(s) 84, 163, 430, 970, 997, 1045, 1087
BssSI CACGAG 1 cut(s) 1584
BssT1I CCWWGG 1 cut(s) 247
Bst2BI CACGAG 1 cut(s) 1584
Bst2UI CCWGG 3 cut(s) 63, 90, 702
Bst4CI ACNGT 4 cut(s) 222, 771, 853, 1765
Bst6I CTCTTC 3 cut(s) 582, 702, 901
BstAPI GCANNNNNTGC 1 cut(s) 10
BstBAI YACGTR 2 cut(s) 207, 1250
BstBI TTCGAA 1 cut(s) 1217
BstDEI CTNAG 6 cut(s) 311, 530, 819, 1082, 1269, 1620
BstDSI CCRYGG 1 cut(s) 247
BstF5I GGATG 3 cut(s) 401, 1376, 1579
BstFNI CGCG 3 cut(s) 844, 933, 1260
BstHHI GCGC 3 cut(s) 231, 1262, 1331
BstKTI GATC 7 cut(s) 87, 166, 433, 973, 1000, 1048, 1090
BstMAI GTCTC 3 cut(s) 177, 307, 815
BstMBI GATC 7 cut(s) 84, 163, 430, 970, 997, 1045, 1087
BstMWI GCNNNNNNNGC 4 cut(s) 10, 917, 1521, 1726
BstNI CCWGG 3 cut(s) 63, 90, 702
BstNSI RCATGY 1 cut(s) 1569
BstSCI CCNGG 3 cut(s) 61, 88, 700
BstSFI CTRYAG 1 cut(s) 712
BstUI CGCG 3 cut(s) 844, 933, 1260
BstV1I GCAGC 3 cut(s) 253, 349, 665
BstV2I GAAGAC 1 cut(s) 887
BstX2I RGATCY 3 cut(s) 84, 970, 1045
BstYI RGATCY 3 cut(s) 84, 970, 1045
BsuRI GGCC 1 cut(s) 26
BtgI CCRYGG 1 cut(s) 247
BtgZI GCGATG 1 cut(s) 1008
BtsCI GGATG 3 cut(s) 401, 1376, 1579
BtsIMutI CAGTG 4 cut(s) 538, 769, 1090, 1266
BtuMI TCGCGA 1 cut(s) 933
BveI ACCTGC 2 cut(s) 66, 1640
CfoI GCGC 3 cut(s) 231, 1262, 1331
Cfr13I GGNCC 1 cut(s) 717
CseI GACGC 1 cut(s) 1167
Csp6I GTAC 9 cut(s) 107, 186, 282, 479, 806, 839, 1247, 1617, 1766
CviAII CATG 6 cut(s) 5, 248, 322, 1303, 1308, 1566
CviQI GTAC 9 cut(s) 107, 186, 282, 479, 806, 839, 1247, 1617, 1766
DdeI CTNAG 6 cut(s) 311, 530, 819, 1082, 1269, 1620
DpnI GATC 7 cut(s) 86, 165, 432, 972, 999, 1047, 1089
DpnII GATC 7 cut(s) 84, 163, 430, 970, 997, 1045, 1087
DraI TTTAAA 2 cut(s) 264, 405
EaeI YGGCCR 1 cut(s) 24
Eam1104I CTCTTC 3 cut(s) 582, 702, 901
EarI CTCTTC 3 cut(s) 582, 702, 901
Eco130I CCWWGG 1 cut(s) 247
Eco24I GRGCYC 1 cut(s) 497
Eco32I GATATC 1 cut(s) 1468
Eco47I GGWCC 1 cut(s) 717
Eco88I CYCGRG 1 cut(s) 1474
EcoRI GAATTC 1 cut(s) 254
EcoRII CCWGG 3 cut(s) 61, 88, 700
EcoRV GATATC 1 cut(s) 1468
EcoT14I CCWWGG 1 cut(s) 247
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 497
ErhI CCWWGG 1 cut(s) 247
FaeI CATG 6 cut(s) 8, 251, 325, 1306, 1311, 1569
FaqI GGGAC 2 cut(s) 42, 1713
FatI CATG 6 cut(s) 4, 247, 321, 1302, 1307, 1565
FauI CCCGC 1 cut(s) 1727
FbaI TGATCA 1 cut(s) 430
Fnu4HI GCNGC 3 cut(s) 242, 338, 679
FokI GGATG 3 cut(s) 408, 1383, 1566
FriOI GRGCYC 1 cut(s) 497
Fsp4HI GCNGC 3 cut(s) 242, 338, 679
FspBI CTAG 2 cut(s) 270, 446
GlaI GCGC 3 cut(s) 230, 1261, 1330
GluI GCNGC 3 cut(s) 242, 338, 679
GsaI CCCAGC 1 cut(s) 1080
GsuI CTGGAG 2 cut(s) 84, 111
HaeIII GGCC 1 cut(s) 26
HgaI GACGC 1 cut(s) 1167
HhaI GCGC 3 cut(s) 231, 1262, 1331
Hin1II CATG 6 cut(s) 8, 251, 325, 1306, 1311, 1569
Hin6I GCGC 3 cut(s) 229, 1260, 1329
HinP1I GCGC 3 cut(s) 229, 1260, 1329
HincII GTYRAC 2 cut(s) 1200, 1441
HindII GTYRAC 2 cut(s) 1200, 1441
HindIII AAGCTT 1 cut(s) 1097
HinfI GANTC 9 cut(s) 625, 685, 733, 865, 953, 1021, 1253, 1273, 1504
HpaI GTTAAC 1 cut(s) 1200
HphI GGTGA 4 cut(s) 549, 620, 676, 1330
Hpy166II GTNNAC 5 cut(s) 667, 767, 1151, 1200, 1441
Hpy188I TCNGA 5 cut(s) 622, 732, 775, 820, 1773
Hpy8I GTNNAC 5 cut(s) 667, 767, 1151, 1200, 1441
Hpy99I CGWCG 1 cut(s) 57
HpyAV CCTTC 5 cut(s) 134, 386, 909, 1142, 1490
HpyCH4III ACNGT 4 cut(s) 222, 771, 853, 1765
HpyCH4IV ACGT 3 cut(s) 206, 333, 1249
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 917, 1521, 1726
HpyF3I CTNAG 6 cut(s) 311, 530, 819, 1082, 1269, 1620
HpySE526I ACGT 3 cut(s) 206, 333, 1249
Hsp92II CATG 6 cut(s) 8, 251, 325, 1306, 1311, 1569
HspAI GCGC 3 cut(s) 229, 1260, 1329
Ksp22I TGATCA 1 cut(s) 430
KspAI GTTAAC 1 cut(s) 1200
Kzo9I GATC 7 cut(s) 84, 163, 430, 970, 997, 1045, 1087
LguI GCTCTTC 1 cut(s) 901
LmnI GCTCC 3 cut(s) 72, 249, 500
Lsp1109I GCAGC 3 cut(s) 253, 349, 665
LweI GCATC 2 cut(s) 386, 824
MaeI CTAG 2 cut(s) 270, 446
MaeII ACGT 3 cut(s) 206, 333, 1249
MaeIII GTNAC 1 cut(s) 939
MalI GATC 7 cut(s) 86, 165, 432, 972, 999, 1047, 1089
MboI GATC 7 cut(s) 84, 163, 430, 970, 997, 1045, 1087
MboII GAAGA 8 cut(s) 158, 316, 599, 689, 874, 887, 918, 1658
MflI RGATCY 3 cut(s) 84, 970, 1045
MhlI GDGCHC 2 cut(s) 445, 497
MlsI TGGCCA 1 cut(s) 26
MluNI TGGCCA 1 cut(s) 26
MlyI GAGTC 4 cut(s) 727, 947, 1030, 1498
Mox20I TGGCCA 1 cut(s) 26
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 1 cut(s) 26
MslI CAYNNNNRTG 2 cut(s) 236, 1584
Msp20I TGGCCA 1 cut(s) 26
MspA1I CMGCKG 1 cut(s) 1343
MspR9I CCNGG 3 cut(s) 63, 90, 702
MvaI CCWGG 3 cut(s) 63, 90, 702
MvnI CGCG 3 cut(s) 844, 933, 1260
MwoI GCNNNNNNNGC 4 cut(s) 10, 917, 1521, 1726
NcoI CCATGG 1 cut(s) 247
NdeII GATC 7 cut(s) 84, 163, 430, 970, 997, 1045, 1087
NlaIII CATG 6 cut(s) 8, 251, 325, 1306, 1311, 1569
NlaIV GGNNCC 3 cut(s) 86, 127, 496
NruI TCGCGA 1 cut(s) 933
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 1569
NspV TTCGAA 1 cut(s) 1217
PciSI GCTCTTC 1 cut(s) 901
PfeI GAWTC 5 cut(s) 625, 685, 865, 1253, 1273
PflMI CCANNNNNTGG 1 cut(s) 1308
PkrI GCNGC 3 cut(s) 243, 339, 680
PleI GAGTC 4 cut(s) 727, 947, 1029, 1498
PpsI GAGTC 4 cut(s) 727, 947, 1029, 1498
Ppu21I YACGTR 2 cut(s) 207, 1250
PsiI TTATAA 1 cut(s) 1658
Psp6I CCWGG 3 cut(s) 61, 88, 700
PspFI CCCAGC 1 cut(s) 1076
PspGI CCWGG 3 cut(s) 61, 88, 700
PspN4I GGNNCC 3 cut(s) 86, 127, 496
PspPI GGNCC 1 cut(s) 717
PsrI GAACNNNNNNTAC 2 cut(s) 1230, 1262
PsuI RGATCY 3 cut(s) 84, 970, 1045
RruI TCGCGA 1 cut(s) 933
RsaI GTAC 9 cut(s) 108, 187, 283, 480, 807, 840, 1248, 1618, 1767
RsaNI GTAC 9 cut(s) 107, 186, 282, 479, 806, 839, 1247, 1617, 1766
RseI CAYNNNNRTG 2 cut(s) 236, 1584
SapI GCTCTTC 1 cut(s) 901
SatI GCNGC 3 cut(s) 242, 338, 679
Sau3AI GATC 7 cut(s) 84, 163, 430, 970, 997, 1045, 1087
Sau96I GGNCC 1 cut(s) 717
ScaI AGTACT 1 cut(s) 807
SchI GAGTC 4 cut(s) 727, 947, 1030, 1498
ScrFI CCNGG 3 cut(s) 63, 90, 702
SduI GDGCHC 2 cut(s) 445, 497
SfaNI GCATC 2 cut(s) 386, 824
SfcI CTRYAG 1 cut(s) 712
SfuI TTCGAA 1 cut(s) 1217
SinI GGWCC 1 cut(s) 717
SmiMI CAYNNNNRTG 2 cut(s) 236, 1584
SmlI CTYRAG 1 cut(s) 326
SmoI CTYRAG 1 cut(s) 326
SpeI ACTAGT 1 cut(s) 445
SsiI CCGC 5 cut(s) 842, 1111, 1341, 1383, 1734
SspI AATATT 1 cut(s) 1538
SspMI CTAG 2 cut(s) 270, 446
StyD4I CCNGG 3 cut(s) 61, 88, 700
StyI CCWWGG 1 cut(s) 247
TaaI ACNGT 4 cut(s) 222, 771, 853, 1765
TaiI ACGT 3 cut(s) 209, 336, 1252
TaqI TCGA 4 cut(s) 16, 1217, 1431, 1709
TatI WGTACW 5 cut(s) 106, 185, 281, 805, 1765
TfiI GAWTC 5 cut(s) 625, 685, 865, 1253, 1273
TscAI CASTG 4 cut(s) 538, 769, 1090, 1273
TseI GCWGC 3 cut(s) 241, 337, 678
TspDTI ATGAA 4 cut(s) 317, 1055, 1124, 1535
TspGWI ACGGA 2 cut(s) 715, 1337
TspRI CASTG 4 cut(s) 538, 769, 1090, 1273
Van91I CCANNNNNTGG 1 cut(s) 1308
VpaK11BI GGWCC 1 cut(s) 717
XapI RAATTY 7 cut(s) 46, 254, 914, 927, 964, 1159, 1166
XceI RCATGY 1 cut(s) 1569
XspI CTAG 2 cut(s) 270, 446
ZrmI AGTACT 1 cut(s) 807
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.