TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 153, 881 |
| AccI | GTMKAC | 1 cut(s) | 351 |
| AciI | CCGC | 2 cut(s) | 482, 1545 |
| AclI | AACGTT | 2 cut(s) | 198, 439 |
| AclWI | GGATC | 3 cut(s) | 69, 78, 737 |
| AcoI | YGGCCR | 2 cut(s) | 5, 930 |
| AcsI | RAATTY | 5 cut(s) | 102, 159, 414, 690, 1060 |
| AcuI | CTGAAG | 1 cut(s) | 533 |
| AfaI | GTAC | 4 cut(s) | 330, 1108, 1150, 1344 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 557, 701, 1502 |
| AflII | CTTAAG | 1 cut(s) | 485 |
| AflIII | ACRYGT | 1 cut(s) | 1397 |
| AhlI | ACTAGT | 2 cut(s) | 1309, 1339 |
| AjnI | CCWGG | 2 cut(s) | 403, 967 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 376, 408, 656, 688 |
| Alw26I | GTCTC | 1 cut(s) | 1174 |
| AlwI | GGATC | 3 cut(s) | 69, 78, 737 |
| AoxI | GGCC | 4 cut(s) | 5, 400, 548, 930 |
| ApeKI | GCWGC | 3 cut(s) | 137, 1204, 1542 |
| ApoI | RAATTY | 5 cut(s) | 102, 159, 414, 690, 1060 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 27 |
| AspA2I | CCTAGG | 1 cut(s) | 1565 |
| AspS9I | GGNCC | 1 cut(s) | 401 |
| AsuC2I | CCSGG | 2 cut(s) | 16, 262 |
| AsuHPI | GGTGA | 2 cut(s) | 1413, 1540 |
| AvrII | CCTAGG | 1 cut(s) | 1565 |
| BalI | TGGCCA | 2 cut(s) | 7, 932 |
| BanII | GRGCYC | 1 cut(s) | 1361 |
| BauI | CACGAG | 2 cut(s) | 32, 429 |
| BbsI | GAAGAC | 3 cut(s) | 897, 953, 1112 |
| BbvI | GCAGC | 3 cut(s) | 124, 1216, 1529 |
| BccI | CCATC | 3 cut(s) | 106, 818, 1391 |
| BciT130I | CCWGG | 2 cut(s) | 405, 969 |
| BclI | TGATCA | 1 cut(s) | 283 |
| BcnI | CCSGG | 2 cut(s) | 16, 262 |
| BcoDI | GTCTC | 1 cut(s) | 1174 |
| BcuI | ACTAGT | 2 cut(s) | 1309, 1339 |
| BfaI | CTAG | 7 cut(s) | 611, 740, 767, 1116, 1310, 1340, 1566 |
| BfrI | CTTAAG | 1 cut(s) | 485 |
| BisI | GCNGC | 4 cut(s) | 138, 1205, 1543, 1546 |
| BlnI | CCTAGG | 1 cut(s) | 1565 |
| BlsI | GCNGC | 4 cut(s) | 139, 1206, 1544, 1547 |
| BmcAI | AGTACT | 1 cut(s) | 1108 |
| Bme1390I | CCNGG | 4 cut(s) | 16, 262, 405, 969 |
| BmgT120I | GGNCC | 1 cut(s) | 401 |
| BmiI | GGNNCC | 3 cut(s) | 992, 1033, 1360 |
| BmrFI | CCNGG | 4 cut(s) | 16, 262, 405, 969 |
| BmsI | GCATC | 2 cut(s) | 863, 1253 |
| BpiI | GAAGAC | 3 cut(s) | 897, 953, 1112 |
| BpmI | CTGGAG | 1 cut(s) | 990 |
| BpuEI | CTTGAG | 1 cut(s) | 1172 |
| BpuMI | CCSGG | 2 cut(s) | 16, 262 |
| Bsa29I | ATCGAT | 2 cut(s) | 73, 1612 |
| BsaJI | CCNNGG | 3 cut(s) | 403, 967, 1565 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 557, 701, 1502 |
| Bse1I | ACTGG | 2 cut(s) | 276, 1074 |
| BseBI | CCWGG | 2 cut(s) | 405, 969 |
| BseCI | ATCGAT | 2 cut(s) | 73, 1612 |
| BseDI | CCNNGG | 3 cut(s) | 403, 967, 1565 |
| BseGI | GGATG | 4 cut(s) | 117, 833, 1268, 1383 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 557, 701, 1502 |
| BseMII | CTCAG | 1 cut(s) | 1169 |
| BseNI | ACTGG | 2 cut(s) | 276, 1074 |
| BseXI | GCAGC | 3 cut(s) | 124, 1216, 1529 |
| BsgI | GTGCAG | 1 cut(s) | 1223 |
| BshFI | GGCC | 4 cut(s) | 7, 402, 550, 932 |
| BshVI | ATCGAT | 2 cut(s) | 73, 1612 |
| BsiSI | CCGG | 2 cut(s) | 16, 261 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 557, 701, 1502 |
| BsmAI | GTCTC | 1 cut(s) | 1174 |
| BsnI | GGCC | 4 cut(s) | 7, 402, 550, 932 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1361 |
| Bsp143I | GATC | 8 cut(s) | 70, 74, 211, 283, 742, 1002, 1297, 1609 |
| BspACI | CCGC | 2 cut(s) | 482, 1545 |
| BspANI | GGCC | 4 cut(s) | 7, 402, 550, 932 |
| BspCNI | CTCAG | 1 cut(s) | 1170 |
| BspDI | ATCGAT | 2 cut(s) | 73, 1612 |
| BspLI | GGNNCC | 3 cut(s) | 992, 1033, 1360 |
| BspPI | GGATC | 3 cut(s) | 69, 78, 737 |
| BspTI | CTTAAG | 1 cut(s) | 485 |
| BsrI | ACTGG | 2 cut(s) | 276, 1074 |
| BssECI | CCNNGG | 3 cut(s) | 403, 967, 1565 |
| BssMI | GATC | 8 cut(s) | 70, 74, 211, 283, 742, 1002, 1297, 1609 |
| BssSI | CACGAG | 2 cut(s) | 32, 429 |
| BssT1I | CCWWGG | 1 cut(s) | 1565 |
| Bst2BI | CACGAG | 2 cut(s) | 32, 429 |
| Bst2UI | CCWGG | 2 cut(s) | 405, 969 |
| Bst4CI | ACNGT | 2 cut(s) | 596, 886 |
| Bst6I | CTCTTC | 3 cut(s) | 993, 1446, 1566 |
| BstAFI | CTTAAG | 1 cut(s) | 485 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 916 |
| BstC8I | GCNNGC | 1 cut(s) | 531 |
| BstDEI | CTNAG | 4 cut(s) | 267, 719, 920, 1178 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 555, 699 |
| BstF5I | GGATG | 4 cut(s) | 117, 833, 1268, 1383 |
| BstKTI | GATC | 8 cut(s) | 73, 77, 214, 286, 745, 1005, 1300, 1612 |
| BstMAI | GTCTC | 1 cut(s) | 1174 |
| BstMBI | GATC | 8 cut(s) | 70, 74, 211, 283, 742, 1002, 1297, 1609 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 916 |
| BstNI | CCWGG | 2 cut(s) | 405, 969 |
| BstNSI | RCATGY | 4 cut(s) | 533, 1096, 1138, 1401 |
| BstSCI | CCNGG | 4 cut(s) | 14, 260, 403, 967 |
| BstV1I | GCAGC | 3 cut(s) | 124, 1216, 1529 |
| BstV2I | GAAGAC | 3 cut(s) | 897, 953, 1112 |
| BstX2I | RGATCY | 1 cut(s) | 742 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 660 |
| BstYI | RGATCY | 1 cut(s) | 742 |
| Bsu15I | ATCGAT | 2 cut(s) | 73, 1612 |
| BsuRI | GGCC | 4 cut(s) | 7, 402, 550, 932 |
| BsuTUI | ATCGAT | 2 cut(s) | 73, 1612 |
| BtsCI | GGATG | 4 cut(s) | 117, 833, 1268, 1383 |
| BtsIMutI | CAGTG | 3 cut(s) | 283, 862, 1081 |
| Cac8I | GCNNGC | 1 cut(s) | 531 |
| Cfr13I | GGNCC | 1 cut(s) | 401 |
| ClaI | ATCGAT | 2 cut(s) | 73, 1612 |
| Csp6I | GTAC | 4 cut(s) | 329, 1107, 1149, 1343 |
| CviAII | CATG | 8 cut(s) | 94, 460, 530, 911, 995, 1093, 1135, 1398 |
| CviQI | GTAC | 4 cut(s) | 329, 1107, 1149, 1343 |
| DdeI | CTNAG | 4 cut(s) | 267, 719, 920, 1178 |
| DpnI | GATC | 8 cut(s) | 72, 76, 213, 285, 744, 1004, 1299, 1611 |
| DpnII | GATC | 8 cut(s) | 70, 74, 211, 283, 742, 1002, 1297, 1609 |
| DraI | TTTAAA | 1 cut(s) | 1272 |
| EaeI | YGGCCR | 2 cut(s) | 5, 930 |
| Eam1104I | CTCTTC | 3 cut(s) | 993, 1446, 1566 |
| EarI | CTCTTC | 3 cut(s) | 993, 1446, 1566 |
| Eco130I | CCWWGG | 1 cut(s) | 1565 |
| Eco24I | GRGCYC | 1 cut(s) | 1361 |
| Eco32I | GATATC | 1 cut(s) | 563 |
| Eco57I | CTGAAG | 1 cut(s) | 533 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 555, 699 |
| EcoRI | GAATTC | 1 cut(s) | 414 |
| EcoRII | CCWGG | 2 cut(s) | 403, 967 |
| EcoRV | GATATC | 1 cut(s) | 563 |
| EcoT14I | CCWWGG | 1 cut(s) | 1565 |
| EcoT22I | ATGCAT | 1 cut(s) | 912 |
| EcoT38I | GRGCYC | 1 cut(s) | 1361 |
| ErhI | CCWWGG | 1 cut(s) | 1565 |
| FaeI | CATG | 8 cut(s) | 97, 463, 533, 914, 998, 1096, 1138, 1401 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 219, 251 |
| FatI | CATG | 8 cut(s) | 93, 459, 529, 910, 994, 1092, 1134, 1397 |
| FbaI | TGATCA | 1 cut(s) | 283 |
| FblI | GTMKAC | 1 cut(s) | 351 |
| Fnu4HI | GCNGC | 4 cut(s) | 138, 1205, 1543, 1546 |
| FokI | GGATG | 4 cut(s) | 124, 840, 1275, 1370 |
| FriOI | GRGCYC | 1 cut(s) | 1361 |
| Fsp4HI | GCNGC | 4 cut(s) | 138, 1205, 1543, 1546 |
| FspBI | CTAG | 7 cut(s) | 611, 740, 767, 1116, 1310, 1340, 1566 |
| GluI | GCNGC | 4 cut(s) | 138, 1205, 1543, 1546 |
| GsuI | CTGGAG | 1 cut(s) | 990 |
| HaeIII | GGCC | 4 cut(s) | 7, 402, 550, 932 |
| HapII | CCGG | 2 cut(s) | 16, 261 |
| Hin1II | CATG | 8 cut(s) | 97, 463, 533, 914, 998, 1096, 1138, 1401 |
| HindIII | AAGCTT | 2 cut(s) | 727, 1517 |
| HinfI | GANTC | 3 cut(s) | 23, 852, 1597 |
| HpaII | CCGG | 2 cut(s) | 16, 261 |
| HphI | GGTGA | 2 cut(s) | 1413, 1540 |
| Hpy166II | GTNNAC | 6 cut(s) | 352, 443, 457, 469, 869, 1531 |
| Hpy188I | TCNGA | 5 cut(s) | 244, 300, 513, 1486, 1596 |
| Hpy188III | TCNNGA | 8 cut(s) | 40, 250, 389, 566, 948, 1029, 1448, 1607 |
| Hpy8I | GTNNAC | 6 cut(s) | 352, 443, 457, 469, 869, 1531 |
| HpyAV | CCTTC | 4 cut(s) | 551, 695, 1040, 1253 |
| HpyCH4III | ACNGT | 2 cut(s) | 596, 886 |
| HpyCH4IV | ACGT | 5 cut(s) | 87, 198, 319, 439, 1200 |
| HpyCH4V | TGCA | 4 cut(s) | 226, 374, 910, 1204 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 916 |
| HpyF3I | CTNAG | 4 cut(s) | 267, 719, 920, 1178 |
| HpySE526I | ACGT | 5 cut(s) | 87, 198, 319, 439, 1200 |
| Hsp92II | CATG | 8 cut(s) | 97, 463, 533, 914, 998, 1096, 1138, 1401 |
| Ksp22I | TGATCA | 1 cut(s) | 283 |
| Kzo9I | GATC | 8 cut(s) | 70, 74, 211, 283, 742, 1002, 1297, 1609 |
| LmnI | GCTCC | 1 cut(s) | 1364 |
| Lsp1109I | GCAGC | 3 cut(s) | 124, 1216, 1529 |
| LweI | GCATC | 2 cut(s) | 863, 1253 |
| MaeI | CTAG | 7 cut(s) | 611, 740, 767, 1116, 1310, 1340, 1566 |
| MaeII | ACGT | 5 cut(s) | 87, 198, 319, 439, 1200 |
| MaeIII | GTNAC | 2 cut(s) | 830, 857 |
| MalI | GATC | 8 cut(s) | 72, 76, 213, 285, 744, 1004, 1299, 1611 |
| MboI | GATC | 8 cut(s) | 70, 74, 211, 283, 742, 1002, 1297, 1609 |
| MflI | RGATCY | 1 cut(s) | 742 |
| MhlI | GDGCHC | 1 cut(s) | 1361 |
| MlsI | TGGCCA | 2 cut(s) | 7, 932 |
| MluCI | AATT | 8 cut(s) | 27, 102, 159, 176, 414, 680, 690, 1060 |
| MluNI | TGGCCA | 2 cut(s) | 7, 932 |
| MlyI | GAGTC | 1 cut(s) | 1591 |
| MmeI | TCCRAC | 3 cut(s) | 79, 340, 654 |
| MnlI | CCTC | 6 cut(s) | 574, 872, 1107, 1348, 1507, 1544 |
| Mox20I | TGGCCA | 2 cut(s) | 7, 932 |
| Mph1103I | ATGCAT | 1 cut(s) | 912 |
| MroXI | GAANNNNTTC | 1 cut(s) | 27 |
| MscI | TGGCCA | 2 cut(s) | 7, 932 |
| MseI | TTAA | 7 cut(s) | 486, 1103, 1271, 1371, 1389, 1412, 1512 |
| MslI | CAYNNNNRTG | 1 cut(s) | 464 |
| Msp20I | TGGCCA | 2 cut(s) | 7, 932 |
| MspA1I | CMGCKG | 1 cut(s) | 137 |
| MspCI | CTTAAG | 1 cut(s) | 485 |
| MspI | CCGG | 2 cut(s) | 16, 261 |
| MspR9I | CCNGG | 4 cut(s) | 16, 262, 405, 969 |
| MvaI | CCWGG | 2 cut(s) | 405, 969 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 916 |
| NciI | CCSGG | 2 cut(s) | 16, 262 |
| NdeII | GATC | 8 cut(s) | 70, 74, 211, 283, 742, 1002, 1297, 1609 |
| NlaIII | CATG | 8 cut(s) | 97, 463, 533, 914, 998, 1096, 1138, 1401 |
| NlaIV | GGNNCC | 3 cut(s) | 992, 1033, 1360 |
| NmuCI | GTSAC | 1 cut(s) | 857 |
| NsiI | ATGCAT | 1 cut(s) | 912 |
| NspI | RCATGY | 4 cut(s) | 533, 1096, 1138, 1401 |
| PaeI | GCATGC | 1 cut(s) | 533 |
| PciI | ACATGT | 1 cut(s) | 1397 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 436 |
| PdmI | GAANNNNTTC | 1 cut(s) | 27 |
| PfeI | GAWTC | 2 cut(s) | 23, 852 |
| PflFI | GACNNNGTC | 3 cut(s) | 89, 262, 806 |
| PkrI | GCNGC | 4 cut(s) | 139, 1206, 1544, 1547 |
| PleI | GAGTC | 1 cut(s) | 1591 |
| PpsI | GAGTC | 1 cut(s) | 1591 |
| PscI | ACATGT | 1 cut(s) | 1397 |
| PsiI | TTATAA | 2 cut(s) | 153, 881 |
| Psp1406I | AACGTT | 2 cut(s) | 198, 439 |
| Psp6I | CCWGG | 2 cut(s) | 403, 967 |
| PspGI | CCWGG | 2 cut(s) | 403, 967 |
| PspN4I | GGNNCC | 3 cut(s) | 992, 1033, 1360 |
| PspPI | GGNCC | 1 cut(s) | 401 |
| PsuI | RGATCY | 1 cut(s) | 742 |
| PsyI | GACNNNGTC | 3 cut(s) | 89, 262, 806 |
| PvuII | CAGCTG | 1 cut(s) | 137 |
| RsaI | GTAC | 4 cut(s) | 330, 1108, 1150, 1344 |
| RsaNI | GTAC | 4 cut(s) | 329, 1107, 1149, 1343 |
| RseI | CAYNNNNRTG | 1 cut(s) | 464 |
| SaqAI | TTAA | 7 cut(s) | 486, 1103, 1271, 1371, 1389, 1412, 1512 |
| SatI | GCNGC | 4 cut(s) | 138, 1205, 1543, 1546 |
| Sau3AI | GATC | 8 cut(s) | 70, 74, 211, 283, 742, 1002, 1297, 1609 |
| Sau96I | GGNCC | 1 cut(s) | 401 |
| ScaI | AGTACT | 1 cut(s) | 1108 |
| SchI | GAGTC | 1 cut(s) | 1591 |
| ScrFI | CCNGG | 4 cut(s) | 16, 262, 405, 969 |
| SduI | GDGCHC | 1 cut(s) | 1361 |
| SfaNI | GCATC | 2 cut(s) | 863, 1253 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 464 |
| SmlI | CTYRAG | 2 cut(s) | 485, 1187 |
| SmoI | CTYRAG | 2 cut(s) | 485, 1187 |
| SpeI | ACTAGT | 2 cut(s) | 1309, 1339 |
| SphI | GCATGC | 1 cut(s) | 533 |
| Sse9I | AATT | 8 cut(s) | 27, 102, 159, 176, 414, 680, 690, 1060 |
| SsiI | CCGC | 2 cut(s) | 482, 1545 |
| SspI | AATATT | 1 cut(s) | 819 |
| SspMI | CTAG | 7 cut(s) | 611, 740, 767, 1116, 1310, 1340, 1566 |
| StyD4I | CCNGG | 4 cut(s) | 14, 260, 403, 967 |
| StyI | CCWWGG | 1 cut(s) | 1565 |
| TaaI | ACNGT | 2 cut(s) | 596, 886 |
| TaiI | ACGT | 5 cut(s) | 90, 201, 322, 442, 1203 |
| TaqI | TCGA | 4 cut(s) | 73, 567, 1300, 1612 |
| TasI | AATT | 8 cut(s) | 27, 102, 159, 176, 414, 680, 690, 1060 |
| TatI | WGTACW | 3 cut(s) | 1106, 1148, 1342 |
| TauI | GCSGC | 1 cut(s) | 1548 |
| TfiI | GAWTC | 2 cut(s) | 23, 852 |
| Tru1I | TTAA | 7 cut(s) | 486, 1103, 1271, 1371, 1389, 1412, 1512 |
| Tru9I | TTAA | 7 cut(s) | 486, 1103, 1271, 1371, 1389, 1412, 1512 |
| TscAI | CASTG | 3 cut(s) | 283, 862, 1081 |
| TseFI | GTSAC | 1 cut(s) | 857 |
| TseI | GCWGC | 3 cut(s) | 137, 1204, 1542 |
| Tsp45I | GTSAC | 1 cut(s) | 857 |
| TspGWI | ACGGA | 2 cut(s) | 854, 1579 |
| TspRI | CASTG | 3 cut(s) | 283, 862, 1081 |
| Tth111I | GACNNNGTC | 3 cut(s) | 89, 262, 806 |
| Vha464I | CTTAAG | 1 cut(s) | 485 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 555, 699 |
| XapI | RAATTY | 5 cut(s) | 102, 159, 414, 690, 1060 |
| XceI | RCATGY | 4 cut(s) | 533, 1096, 1138, 1401 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1073 |
| XmaJI | CCTAGG | 1 cut(s) | 1565 |
| XmiI | GTMKAC | 1 cut(s) | 351 |
| XmnI | GAANNNNTTC | 1 cut(s) | 27 |
| XspI | CTAG | 7 cut(s) | 611, 740, 767, 1116, 1310, 1340, 1566 |
| ZrmI | AGTACT | 1 cut(s) | 1108 |
| Zsp2I | ATGCAT | 1 cut(s) | 912 |